2021-09-02T16:07:45,093 Created temporary directory: /tmp/pip-ephem-wheel-cache-05hnygab
2021-09-02T16:07:45,099 Created temporary directory: /tmp/pip-req-tracker-62qxrxl5
2021-09-02T16:07:45,100 Initialized build tracking at /tmp/pip-req-tracker-62qxrxl5
2021-09-02T16:07:45,101 Created build tracker: /tmp/pip-req-tracker-62qxrxl5
2021-09-02T16:07:45,101 Entered build tracker: /tmp/pip-req-tracker-62qxrxl5
2021-09-02T16:07:45,103 Created temporary directory: /tmp/pip-wheel-_3jd9asf
2021-09-02T16:07:45,164 Looking in indexes: https://pypi.org/simple, https://www.piwheels.org/simple
2021-09-02T16:07:45,167 2 location(s) to search for versions of damona:
2021-09-02T16:07:45,167 * https://pypi.org/simple/damona/
2021-09-02T16:07:45,167 * https://www.piwheels.org/simple/damona/
2021-09-02T16:07:45,168 Fetching project page and analyzing links: https://pypi.org/simple/damona/
2021-09-02T16:07:45,170 Getting page https://pypi.org/simple/damona/
2021-09-02T16:07:45,175 Found index url https://pypi.org/simple
2021-09-02T16:07:45,513   Found link https://files.pythonhosted.org/packages/cd/9e/27ac1c5e27caa58f2d161dff75c5c4cdd92670440b07e7709802a9459b9c/damona-0.1.0.tar.gz#sha256=ffd1316e321796f0fa5a56b54f75dd4f5d927ecf0bc9c1a336f160f038ae6890 (from https://pypi.org/simple/damona/), version: 0.1.0
2021-09-02T16:07:45,515   Found link https://files.pythonhosted.org/packages/c9/20/7fe4d2f1c34300ed845a3b033a8cd8b3de72b82a25599330b10e2317ca48/damona-0.1.1.tar.gz#sha256=b5c70b83f51e4d32f2f3dda532abf3713a177b8e5ef7a0b26a44a801a0313236 (from https://pypi.org/simple/damona/), version: 0.1.1
2021-09-02T16:07:45,516   Found link https://files.pythonhosted.org/packages/36/9b/153b2e8849b6cf3b78ac13c3e30fbd4f1774c31b7b34cb849eb3a14bf69c/damona-0.2.0.tar.gz#sha256=6023b50d62eb18c216383a96021bf88cdf651ebc741397892b74bc49d642bdc1 (from https://pypi.org/simple/damona/), version: 0.2.0
2021-09-02T16:07:45,517   Found link https://files.pythonhosted.org/packages/5d/85/e936fbc729383625e399b7dabd3238995c915084986ec573588855c921ee/damona-0.2.1.tar.gz#sha256=69aa6cb1042ad0bf06363f68867de0fec1be4cf717d73574829d15967fadf019 (from https://pypi.org/simple/damona/), version: 0.2.1
2021-09-02T16:07:45,517   Found link https://files.pythonhosted.org/packages/d8/72/c819e18fd5dcf8abe904e97240b4adb023e80b73a311ca4cddd0f8b6509c/damona-0.2.2.tar.gz#sha256=e8eced44b5c69ff5c0b87977969c0942017163e78203fcdccd8591c5d78a7a22 (from https://pypi.org/simple/damona/), version: 0.2.2
2021-09-02T16:07:45,519   Found link https://files.pythonhosted.org/packages/2a/2f/3eca4d23aad1c0df2a1f708f49fd68de86b47fb3ff0b7270182074adbe24/damona-0.3.0.tar.gz#sha256=d87f56f4c50b9f87c6ef42a8c2ee9642e404889894524acd879dbfa301d88477 (from https://pypi.org/simple/damona/), version: 0.3.0
2021-09-02T16:07:45,519   Found link https://files.pythonhosted.org/packages/a4/85/cf3ba30aadaf7e322c200ff61874eb24a3ded6d64ad308d15760d26338f1/damona-0.3.1.tar.gz#sha256=a99d48dcfb750e079771ae08e93ade1b0223cc08744cc65bf5d9623771c74439 (from https://pypi.org/simple/damona/), version: 0.3.1
2021-09-02T16:07:45,520   Found link https://files.pythonhosted.org/packages/c2/ef/1a8417b608f9a1f46749cea5ef2cd0bef0e2e9449182baa65ef403b9bd6e/damona-0.4.0.tar.gz#sha256=533275af540923fe2ff8a67b0ee49852cfa322880906e32461b79019aecf444e (from https://pypi.org/simple/damona/), version: 0.4.0
2021-09-02T16:07:45,521   Found link https://files.pythonhosted.org/packages/66/87/cc314bac96ca0afc29e95d91a07d70c56df5c37cb4209f8bfc4eb959418a/damona-0.4.1.tar.gz#sha256=cc5f816a84aca53cae91d7c851a2023bbea9f9f6bf5c8a3f4ac2a3d5f7588340 (from https://pypi.org/simple/damona/), version: 0.4.1
2021-09-02T16:07:45,522   Found link https://files.pythonhosted.org/packages/50/5a/2b91d89732ad7eabd61d2060de0ecc94c4a04c25999f199d2cb93ff943e5/damona-0.4.2.tar.gz#sha256=13f160a7c327acad47e006164bd84e766c94e36f50fe0eef3617a0031b1a2a5f (from https://pypi.org/simple/damona/), version: 0.4.2
2021-09-02T16:07:45,523   Found link https://files.pythonhosted.org/packages/e5/d8/0d4fe942e4a6dd2b5a45ac16a038f99dbea115dde61c41aec5f2815ef2a6/damona-0.4.3.tar.gz#sha256=ccd9e632ac9e87e2dd4774cad490a80de8c91391ca9f1f42ca44f27a41782edc (from https://pypi.org/simple/damona/), version: 0.4.3
2021-09-02T16:07:45,524   Found link https://files.pythonhosted.org/packages/9e/e0/d085c328e8cc39ca40e2176f3c5c5ffeb66e1271abeeb36f863c5acb8bc1/damona-0.5.0.tar.gz#sha256=6742de042d81a26a288ad91fb2824fd5cede8f6f2d593238ab65ef88ddb85108 (from https://pypi.org/simple/damona/), version: 0.5.0
2021-09-02T16:07:45,525   Found link https://files.pythonhosted.org/packages/73/65/3e225ffc73fe435cc40b8658c3838e18b66bac46c2f2227c858c1751b485/damona-0.5.1.tar.gz#sha256=3d74601d8dc7e8fea702c5932b8eb699b1e0496e01cd714051e05a63de254694 (from https://pypi.org/simple/damona/), version: 0.5.1
2021-09-02T16:07:45,526   Found link https://files.pythonhosted.org/packages/09/b4/f0570169435b2629cac80df83e3140b82a480cdfd795f8f6c54c4c36d53e/damona-0.5.2.tar.gz#sha256=1e6f0abd77e643ef7f78e226078fd426d4948fe4b4d04689aacb798b985b0145 (from https://pypi.org/simple/damona/), version: 0.5.2
2021-09-02T16:07:45,527   Found link https://files.pythonhosted.org/packages/34/85/cce2fff4d9e5c90ac7dc665db03e0c134fd23930d6fe7168e3fd48a7899a/damona-0.5.3.tar.gz#sha256=74f6d29827606ee27123183a7eae6e19392d705c5637a1517abfb802ccf5e1ed (from https://pypi.org/simple/damona/), version: 0.5.3
2021-09-02T16:07:45,528   Found link https://files.pythonhosted.org/packages/94/69/89c64bbc8ccd86ac96042fd140a8c0a39f0168d685f82445361e46d64734/damona-0.5.4.tar.gz#sha256=14a1467edaf9b65c5826576f851cad3283cbf5b092c34a54d625ecfb33de428f (from https://pypi.org/simple/damona/), version: 0.5.4
2021-09-02T16:07:45,529 Fetching project page and analyzing links: https://www.piwheels.org/simple/damona/
2021-09-02T16:07:45,530 Getting page https://www.piwheels.org/simple/damona/
2021-09-02T16:07:45,532 Found index url https://www.piwheels.org/simple
2021-09-02T16:07:45,744   Skipping link: No binaries permitted for damona: https://www.piwheels.org/simple/damona/damona-0.2.2-py3-none-any.whl#sha256=9165891e105689e76d95ddf46067837a1ee8b13d1d3af36b5af846c1b8ee4b92 (from https://www.piwheels.org/simple/damona/)
2021-09-02T16:07:45,745   Skipping link: No binaries permitted for damona: https://www.piwheels.org/simple/damona/damona-0.3.0-py3-none-any.whl#sha256=b9bad2b5e81d6bdca4b895a2d7dfcd19a5450509889904d9840f447a3a5a5f11 (from https://www.piwheels.org/simple/damona/)
2021-09-02T16:07:45,746   Skipping link: No binaries permitted for damona: https://www.piwheels.org/simple/damona/damona-0.3.1-py3-none-any.whl#sha256=934799d1cf5a920bc199416dc79952e268359cc4ad20d561571fd85e4c2d84dc (from https://www.piwheels.org/simple/damona/)
2021-09-02T16:07:45,747   Skipping link: No binaries permitted for damona: https://www.piwheels.org/simple/damona/damona-0.4.0-py3-none-any.whl#sha256=131eb91e5a14664d9a717ad2a12025787ed02a761336318d57de6076bbfe0695 (from https://www.piwheels.org/simple/damona/)
2021-09-02T16:07:45,747   Skipping link: No binaries permitted for damona: https://www.piwheels.org/simple/damona/damona-0.4.1-py3-none-any.whl#sha256=87fafcd2a349a2c12e3f28edb48015a402a3e50f89c4da8072167483d0d7a200 (from https://www.piwheels.org/simple/damona/)
2021-09-02T16:07:45,748   Skipping link: No binaries permitted for damona: https://www.piwheels.org/simple/damona/damona-0.4.2-py3-none-any.whl#sha256=326ee5f5e021f463128cc57ff6f3ff6129f46271dfaf4f823a5645f2e94d7aa4 (from https://www.piwheels.org/simple/damona/)
2021-09-02T16:07:45,749   Skipping link: No binaries permitted for damona: https://www.piwheels.org/simple/damona/damona-0.4.3-py3-none-any.whl#sha256=7b05aa70e5bb4664074b7b3d9b63873f9aa72e29217bf7a971614685c338107e (from https://www.piwheels.org/simple/damona/)
2021-09-02T16:07:45,750   Skipping link: No binaries permitted for damona: https://www.piwheels.org/simple/damona/damona-0.5.0-py3-none-any.whl#sha256=2b105c2097bf8572e7d57f7b842123852413d4d1266886b21d4f1e94b0d25109 (from https://www.piwheels.org/simple/damona/)
2021-09-02T16:07:45,750   Skipping link: No binaries permitted for damona: https://www.piwheels.org/simple/damona/damona-0.5.1-py3-none-any.whl#sha256=5a3fb6b370b13c5085238e60671c083d51b2afa8ca94314f8c382b46b4fecc0a (from https://www.piwheels.org/simple/damona/)
2021-09-02T16:07:45,751   Skipping link: No binaries permitted for damona: https://www.piwheels.org/simple/damona/damona-0.5.2-py3-none-any.whl#sha256=96b9d98f2692a8ed1bd3d044f9cbd041d99762fcc2003f9e4c657e7bb885a061 (from https://www.piwheels.org/simple/damona/)
2021-09-02T16:07:45,752   Skipping link: No binaries permitted for damona: https://www.piwheels.org/simple/damona/damona-0.5.3-py3-none-any.whl#sha256=c4e616966557b5bdf1adb7658f29a695e17d0f74b00c292ec912da0a37907ba8 (from https://www.piwheels.org/simple/damona/)
2021-09-02T16:07:45,789 Given no hashes to check 1 links for project 'damona': discarding no candidates
2021-09-02T16:07:45,821 Collecting damona==0.5.4
2021-09-02T16:07:45,825   Created temporary directory: /tmp/pip-unpack-g7fnwxso
2021-09-02T16:07:46,050   Downloading damona-0.5.4.tar.gz (47 kB)
2021-09-02T16:07:46,696   Added damona==0.5.4 from https://files.pythonhosted.org/packages/94/69/89c64bbc8ccd86ac96042fd140a8c0a39f0168d685f82445361e46d64734/damona-0.5.4.tar.gz#sha256=14a1467edaf9b65c5826576f851cad3283cbf5b092c34a54d625ecfb33de428f to build tracker '/tmp/pip-req-tracker-62qxrxl5'
2021-09-02T16:07:46,698     Running setup.py (path:/tmp/pip-wheel-_3jd9asf/damona_530298afb0de4e07aec4f745755c5e6a/setup.py) egg_info for package damona
2021-09-02T16:07:46,700     Created temporary directory: /tmp/pip-pip-egg-info-srpo0c0y
2021-09-02T16:07:46,700     Running command python setup.py egg_info
2021-09-02T16:07:49,023     running egg_info
2021-09-02T16:07:49,028     creating /tmp/pip-pip-egg-info-srpo0c0y/damona.egg-info
2021-09-02T16:07:49,031     writing entry points to /tmp/pip-pip-egg-info-srpo0c0y/damona.egg-info/entry_points.txt
2021-09-02T16:07:49,034     writing /tmp/pip-pip-egg-info-srpo0c0y/damona.egg-info/PKG-INFO
2021-09-02T16:07:49,042     writing dependency_links to /tmp/pip-pip-egg-info-srpo0c0y/damona.egg-info/dependency_links.txt
2021-09-02T16:07:49,044     writing top-level names to /tmp/pip-pip-egg-info-srpo0c0y/damona.egg-info/top_level.txt
2021-09-02T16:07:49,046     writing requirements to /tmp/pip-pip-egg-info-srpo0c0y/damona.egg-info/requires.txt
2021-09-02T16:07:49,050     writing manifest file '/tmp/pip-pip-egg-info-srpo0c0y/damona.egg-info/SOURCES.txt'
2021-09-02T16:07:49,463     reading manifest file '/tmp/pip-pip-egg-info-srpo0c0y/damona.egg-info/SOURCES.txt'
2021-09-02T16:07:49,466     reading manifest template 'MANIFEST.in'
2021-09-02T16:07:49,469     warning: no previously-included files matching '__pycache__' found under directory '*'
2021-09-02T16:07:49,471     warning: no previously-included files matching '*pyc' found under directory '*'
2021-09-02T16:07:49,486     writing manifest file '/tmp/pip-pip-egg-info-srpo0c0y/damona.egg-info/SOURCES.txt'
2021-09-02T16:07:49,646   Source in /tmp/pip-wheel-_3jd9asf/damona_530298afb0de4e07aec4f745755c5e6a has version 0.5.4, which satisfies requirement damona==0.5.4 from https://files.pythonhosted.org/packages/94/69/89c64bbc8ccd86ac96042fd140a8c0a39f0168d685f82445361e46d64734/damona-0.5.4.tar.gz#sha256=14a1467edaf9b65c5826576f851cad3283cbf5b092c34a54d625ecfb33de428f
2021-09-02T16:07:49,647   Removed damona==0.5.4 from https://files.pythonhosted.org/packages/94/69/89c64bbc8ccd86ac96042fd140a8c0a39f0168d685f82445361e46d64734/damona-0.5.4.tar.gz#sha256=14a1467edaf9b65c5826576f851cad3283cbf5b092c34a54d625ecfb33de428f from build tracker '/tmp/pip-req-tracker-62qxrxl5'
2021-09-02T16:07:49,661 Created temporary directory: /tmp/pip-unpack-n9if5t9g
2021-09-02T16:07:49,662 Building wheels for collected packages: damona
2021-09-02T16:07:49,671   Created temporary directory: /tmp/pip-wheel-go4u7bgz
2021-09-02T16:07:49,672   Building wheel for damona (setup.py): started
2021-09-02T16:07:49,673   Destination directory: /tmp/pip-wheel-go4u7bgz
2021-09-02T16:07:49,673   Running command /usr/bin/python3 -u -c 'import sys, setuptools, tokenize; sys.argv[0] = '"'"'/tmp/pip-wheel-_3jd9asf/damona_530298afb0de4e07aec4f745755c5e6a/setup.py'"'"'; __file__='"'"'/tmp/pip-wheel-_3jd9asf/damona_530298afb0de4e07aec4f745755c5e6a/setup.py'"'"';f=getattr(tokenize, '"'"'open'"'"', open)(__file__);code=f.read().replace('"'"'\r\n'"'"', '"'"'\n'"'"');f.close();exec(compile(code, __file__, '"'"'exec'"'"'))' bdist_wheel -d /tmp/pip-wheel-go4u7bgz
2021-09-02T16:07:52,009   running bdist_wheel
2021-09-02T16:07:52,016   running build
2021-09-02T16:07:52,017   running build_py
2021-09-02T16:07:52,333   creating build
2021-09-02T16:07:52,334   creating build/lib
2021-09-02T16:07:52,336   creating build/lib/damona
2021-09-02T16:07:52,338   copying damona/common.py -> build/lib/damona
2021-09-02T16:07:52,344   copying damona/builders.py -> build/lib/damona
2021-09-02T16:07:52,349   copying damona/registry.py -> build/lib/damona
2021-09-02T16:07:52,354   copying damona/config.py -> build/lib/damona
2021-09-02T16:07:52,358   copying damona/colors.py -> build/lib/damona
2021-09-02T16:07:52,364   copying damona/script.py -> build/lib/damona
2021-09-02T16:07:52,371   copying damona/__init__.py -> build/lib/damona
2021-09-02T16:07:52,377   copying damona/install.py -> build/lib/damona
2021-09-02T16:07:52,384   copying damona/environ.py -> build/lib/damona
2021-09-02T16:07:52,393   creating build/lib/damona/shell
2021-09-02T16:07:52,395   copying damona/shell/__init__.py -> build/lib/damona/shell
2021-09-02T16:07:52,401   creating build/lib/damona/recipes
2021-09-02T16:07:52,404   copying damona/recipes/__init__.py -> build/lib/damona/recipes
2021-09-02T16:07:52,471   copying damona/shell/damona.sh -> build/lib/damona/shell
2021-09-02T16:07:52,475   creating build/lib/damona/recipes/quast
2021-09-02T16:07:52,477   copying damona/recipes/quast/Singularity.quast_5.0.2 -> build/lib/damona/recipes/quast
2021-09-02T16:07:52,482   creating build/lib/damona/recipes/minimap2
2021-09-02T16:07:52,484   copying damona/recipes/minimap2/Singularity.minimap2_2.17.0 -> build/lib/damona/recipes/minimap2
2021-09-02T16:07:52,488   creating build/lib/damona/recipes/rtools
2021-09-02T16:07:52,491   copying damona/recipes/rtools/Singularity.Rtools_1.1.0 -> build/lib/damona/recipes/rtools
2021-09-02T16:07:52,497   copying damona/recipes/rtools/Singularity.Rtools_1.0.0 -> build/lib/damona/recipes/rtools
2021-09-02T16:07:52,503   creating build/lib/damona/recipes/R
2021-09-02T16:07:52,505   copying damona/recipes/R/Singularity.R_3.6.3 -> build/lib/damona/recipes/R
2021-09-02T16:07:52,512   copying damona/recipes/R/Singularity.R_4.0.2 -> build/lib/damona/recipes/R
2021-09-02T16:07:52,518   creating build/lib/damona/recipes/rnadiff
2021-09-02T16:07:52,521   copying damona/recipes/rnadiff/Singularity.rnadiff_1.7.1 -> build/lib/damona/recipes/rnadiff
2021-09-02T16:07:52,527   creating build/lib/damona/recipes/art
2021-09-02T16:07:52,530   copying damona/recipes/art/Singularity.art_3.11.14 -> build/lib/damona/recipes/art
2021-09-02T16:07:52,534   creating build/lib/damona/recipes/canu
2021-09-02T16:07:52,536   copying damona/recipes/canu/Singularity.canu_1.6.0 -> build/lib/damona/recipes/canu
2021-09-02T16:07:52,541   copying damona/recipes/canu/Singularity.canu_1.8.0 -> build/lib/damona/recipes/canu
2021-09-02T16:07:52,545   creating build/lib/damona/recipes/ucsc
2021-09-02T16:07:52,547   copying damona/recipes/ucsc/Singularity.ucsc_0.1.0 -> build/lib/damona/recipes/ucsc
2021-09-02T16:07:52,553   creating build/lib/damona/recipes/kraken
2021-09-02T16:07:52,556   copying damona/recipes/kraken/Singularity.kraken_1.1 -> build/lib/damona/recipes/kraken
2021-09-02T16:07:52,563   copying damona/recipes/kraken/Singularity.kraken_2.0.9 -> build/lib/damona/recipes/kraken
2021-09-02T16:07:52,569   creating build/lib/damona/recipes/sequana_perl_tools
2021-09-02T16:07:52,571   copying damona/recipes/sequana_perl_tools/Singularity.sequana_perl_tools_0.1.0 -> build/lib/damona/recipes/sequana_perl_tools
2021-09-02T16:07:52,579   creating build/lib/damona/recipes/damona
2021-09-02T16:07:52,581   copying damona/recipes/damona/Singularity.damona_0.3.0 -> build/lib/damona/recipes/damona
2021-09-02T16:07:52,588   copying damona/recipes/damona/Singularity.damona_0.4.2 -> build/lib/damona/recipes/damona
2021-09-02T16:07:52,594   creating build/lib/damona/recipes/conda
2021-09-02T16:07:52,597   copying damona/recipes/conda/Singularity.conda_4.7.12 -> build/lib/damona/recipes/conda
2021-09-02T16:07:52,604   copying damona/recipes/conda/Singularity.conda_4.9.2 -> build/lib/damona/recipes/conda
2021-09-02T16:07:52,611   creating build/lib/damona/recipes/rnaseqc
2021-09-02T16:07:52,613   copying damona/recipes/rnaseqc/Singularity.rnaseqc_2.35.0 -> build/lib/damona/recipes/rnaseqc
2021-09-02T16:07:52,620   creating build/lib/damona/recipes/sequana_tools
2021-09-02T16:07:52,623   copying damona/recipes/sequana_tools/Singularity.sequana_tools_0.10.0 -> build/lib/damona/recipes/sequana_tools
2021-09-02T16:07:52,630   copying damona/recipes/sequana_tools/Singularity.sequana_tools_0.11.0 -> build/lib/damona/recipes/sequana_tools
2021-09-02T16:07:52,636   copying damona/recipes/sequana_tools/Singularity.sequana_tools_0.9.0 -> build/lib/damona/recipes/sequana_tools
2021-09-02T16:07:52,643   creating build/lib/damona/recipes/trf
2021-09-02T16:07:52,645   copying damona/recipes/trf/Singularity.trf_4.10.0 -> build/lib/damona/recipes/trf
2021-09-02T16:07:52,652   copying damona/recipes/trf/Singularity.trf_4.09 -> build/lib/damona/recipes/trf
2021-09-02T16:07:52,659   creating build/lib/damona/recipes/fastqc
2021-09-02T16:07:52,661   copying damona/recipes/fastqc/Singularity.fastqc_0.11.9 -> build/lib/damona/recipes/fastqc
2021-09-02T16:07:52,668   copying damona/recipes/fastqc/Singularity.fastqc_0.11.8 -> build/lib/damona/recipes/fastqc
2021-09-02T16:07:52,674   creating build/lib/damona/recipes/prokka
2021-09-02T16:07:52,676   copying damona/recipes/prokka/Singularity.prokka_1.14.5 -> build/lib/damona/recipes/prokka
2021-09-02T16:07:52,681   creating build/lib/damona/recipes/falco
2021-09-02T16:07:52,682   copying damona/recipes/falco/Singularity.falco_0.2.1 -> build/lib/damona/recipes/falco
2021-09-02T16:07:52,687   creating build/lib/damona/recipes/bcl2fastq
2021-09-02T16:07:52,689   copying damona/recipes/bcl2fastq/Singularity.bcl2fastq_2.20.0 -> build/lib/damona/recipes/bcl2fastq
2021-09-02T16:07:52,696   creating build/lib/damona/recipes/phantompeakqualtools
2021-09-02T16:07:52,698   copying damona/recipes/phantompeakqualtools/Singularity.phantompeakqualtools_1.2.2 -> build/lib/damona/recipes/phantompeakqualtools
2021-09-02T16:07:52,705   creating build/lib/damona/recipes/graphviz
2021-09-02T16:07:52,707   copying damona/recipes/graphviz/Singularity.graphviz_2.43.0 -> build/lib/damona/recipes/graphviz
2021-09-02T16:07:52,714   creating build/lib/damona/recipes/gffread
2021-09-02T16:07:52,717   copying damona/recipes/gffread/Singularity.gffread_0.12.1 -> build/lib/damona/recipes/gffread
2021-09-02T16:07:52,724   creating build/lib/damona/recipes/salmon
2021-09-02T16:07:52,726   copying damona/recipes/salmon/Singularity.salmon_1.3.0 -> build/lib/damona/recipes/salmon
2021-09-02T16:07:52,733   copying damona/recipes/quast/registry.yaml -> build/lib/damona/recipes/quast
2021-09-02T16:07:52,738   copying damona/recipes/minimap2/registry.yaml -> build/lib/damona/recipes/minimap2
2021-09-02T16:07:52,742   copying damona/recipes/rtools/registry.yaml -> build/lib/damona/recipes/rtools
2021-09-02T16:07:52,747   copying damona/recipes/R/registry.yaml -> build/lib/damona/recipes/R
2021-09-02T16:07:52,752   copying damona/recipes/rnadiff/registry.yaml -> build/lib/damona/recipes/rnadiff
2021-09-02T16:07:52,758   copying damona/recipes/art/registry.yaml -> build/lib/damona/recipes/art
2021-09-02T16:07:52,765   copying damona/recipes/canu/registry.yaml -> build/lib/damona/recipes/canu
2021-09-02T16:07:52,771   copying damona/recipes/ucsc/registry.yaml -> build/lib/damona/recipes/ucsc
2021-09-02T16:07:52,777   copying damona/recipes/kraken/registry.yaml -> build/lib/damona/recipes/kraken
2021-09-02T16:07:52,784   copying damona/recipes/sequana_perl_tools/registry.yaml -> build/lib/damona/recipes/sequana_perl_tools
2021-09-02T16:07:52,790   creating build/lib/damona/recipes/hisat2
2021-09-02T16:07:52,792   copying damona/recipes/hisat2/registry.yaml -> build/lib/damona/recipes/hisat2
2021-09-02T16:07:52,798   copying damona/recipes/damona/registry.yaml -> build/lib/damona/recipes/damona
2021-09-02T16:07:52,802   copying damona/recipes/conda/registry.yaml -> build/lib/damona/recipes/conda
2021-09-02T16:07:52,807   copying damona/recipes/rnaseqc/registry.yaml -> build/lib/damona/recipes/rnaseqc
2021-09-02T16:07:52,812   copying damona/recipes/sequana_tools/registry.yaml -> build/lib/damona/recipes/sequana_tools
2021-09-02T16:07:52,818   copying damona/recipes/trf/registry.yaml -> build/lib/damona/recipes/trf
2021-09-02T16:07:52,824   copying damona/recipes/fastqc/registry.yaml -> build/lib/damona/recipes/fastqc
2021-09-02T16:07:52,831   copying damona/recipes/prokka/registry.yaml -> build/lib/damona/recipes/prokka
2021-09-02T16:07:52,837   copying damona/recipes/falco/registry.yaml -> build/lib/damona/recipes/falco
2021-09-02T16:07:52,844   copying damona/recipes/bcl2fastq/registry.yaml -> build/lib/damona/recipes/bcl2fastq
2021-09-02T16:07:52,850   copying damona/recipes/phantompeakqualtools/registry.yaml -> build/lib/damona/recipes/phantompeakqualtools
2021-09-02T16:07:52,856   copying damona/recipes/graphviz/registry.yaml -> build/lib/damona/recipes/graphviz
2021-09-02T16:07:52,863   copying damona/recipes/gffread/registry.yaml -> build/lib/damona/recipes/gffread
2021-09-02T16:07:52,869   copying damona/recipes/salmon/registry.yaml -> build/lib/damona/recipes/salmon
2021-09-02T16:07:52,880   installing to build/bdist.linux-armv7l/wheel
2021-09-02T16:07:52,881   running install
2021-09-02T16:07:52,883   running install_lib
2021-09-02T16:07:52,890   creating build/bdist.linux-armv7l
2021-09-02T16:07:52,891   creating build/bdist.linux-armv7l/wheel
2021-09-02T16:07:52,895   creating build/bdist.linux-armv7l/wheel/damona
2021-09-02T16:07:52,897   copying build/lib/damona/common.py -> build/bdist.linux-armv7l/wheel/damona
2021-09-02T16:07:52,903   copying build/lib/damona/builders.py -> build/bdist.linux-armv7l/wheel/damona
2021-09-02T16:07:52,907   copying build/lib/damona/registry.py -> build/bdist.linux-armv7l/wheel/damona
2021-09-02T16:07:52,913   copying build/lib/damona/config.py -> build/bdist.linux-armv7l/wheel/damona
2021-09-02T16:07:52,918   copying build/lib/damona/colors.py -> build/bdist.linux-armv7l/wheel/damona
2021-09-02T16:07:52,923   copying build/lib/damona/script.py -> build/bdist.linux-armv7l/wheel/damona
2021-09-02T16:07:52,931   copying build/lib/damona/__init__.py -> build/bdist.linux-armv7l/wheel/damona
2021-09-02T16:07:52,938   creating build/bdist.linux-armv7l/wheel/damona/shell
2021-09-02T16:07:52,940   copying build/lib/damona/shell/__init__.py -> build/bdist.linux-armv7l/wheel/damona/shell
2021-09-02T16:07:52,945   copying build/lib/damona/shell/damona.sh -> build/bdist.linux-armv7l/wheel/damona/shell
2021-09-02T16:07:52,950   copying build/lib/damona/install.py -> build/bdist.linux-armv7l/wheel/damona
2021-09-02T16:07:52,958   copying build/lib/damona/environ.py -> build/bdist.linux-armv7l/wheel/damona
2021-09-02T16:07:52,967   creating build/bdist.linux-armv7l/wheel/damona/recipes
2021-09-02T16:07:52,971   creating build/bdist.linux-armv7l/wheel/damona/recipes/quast
2021-09-02T16:07:52,974   copying build/lib/damona/recipes/quast/registry.yaml -> build/bdist.linux-armv7l/wheel/damona/recipes/quast
2021-09-02T16:07:52,979   copying build/lib/damona/recipes/quast/Singularity.quast_5.0.2 -> build/bdist.linux-armv7l/wheel/damona/recipes/quast
2021-09-02T16:07:52,986   creating build/bdist.linux-armv7l/wheel/damona/recipes/minimap2
2021-09-02T16:07:52,988   copying build/lib/damona/recipes/minimap2/registry.yaml -> build/bdist.linux-armv7l/wheel/damona/recipes/minimap2
2021-09-02T16:07:52,994   copying build/lib/damona/recipes/minimap2/Singularity.minimap2_2.17.0 -> build/bdist.linux-armv7l/wheel/damona/recipes/minimap2
2021-09-02T16:07:53,001   creating build/bdist.linux-armv7l/wheel/damona/recipes/rtools
2021-09-02T16:07:53,003   copying build/lib/damona/recipes/rtools/registry.yaml -> build/bdist.linux-armv7l/wheel/damona/recipes/rtools
2021-09-02T16:07:53,009   copying build/lib/damona/recipes/rtools/Singularity.Rtools_1.1.0 -> build/bdist.linux-armv7l/wheel/damona/recipes/rtools
2021-09-02T16:07:53,014   copying build/lib/damona/recipes/rtools/Singularity.Rtools_1.0.0 -> build/bdist.linux-armv7l/wheel/damona/recipes/rtools
2021-09-02T16:07:53,021   creating build/bdist.linux-armv7l/wheel/damona/recipes/R
2021-09-02T16:07:53,024   copying build/lib/damona/recipes/R/registry.yaml -> build/bdist.linux-armv7l/wheel/damona/recipes/R
2021-09-02T16:07:53,029   copying build/lib/damona/recipes/R/Singularity.R_3.6.3 -> build/bdist.linux-armv7l/wheel/damona/recipes/R
2021-09-02T16:07:53,035   copying build/lib/damona/recipes/R/Singularity.R_4.0.2 -> build/bdist.linux-armv7l/wheel/damona/recipes/R
2021-09-02T16:07:53,041   creating build/bdist.linux-armv7l/wheel/damona/recipes/rnadiff
2021-09-02T16:07:53,042   copying build/lib/damona/recipes/rnadiff/Singularity.rnadiff_1.7.1 -> build/bdist.linux-armv7l/wheel/damona/recipes/rnadiff
2021-09-02T16:07:53,047   copying build/lib/damona/recipes/rnadiff/registry.yaml -> build/bdist.linux-armv7l/wheel/damona/recipes/rnadiff
2021-09-02T16:07:53,052   creating build/bdist.linux-armv7l/wheel/damona/recipes/art
2021-09-02T16:07:53,053   copying build/lib/damona/recipes/art/Singularity.art_3.11.14 -> build/bdist.linux-armv7l/wheel/damona/recipes/art
2021-09-02T16:07:53,058   copying build/lib/damona/recipes/art/registry.yaml -> build/bdist.linux-armv7l/wheel/damona/recipes/art
2021-09-02T16:07:53,064   creating build/bdist.linux-armv7l/wheel/damona/recipes/canu
2021-09-02T16:07:53,067   copying build/lib/damona/recipes/canu/Singularity.canu_1.6.0 -> build/bdist.linux-armv7l/wheel/damona/recipes/canu
2021-09-02T16:07:53,072   copying build/lib/damona/recipes/canu/registry.yaml -> build/bdist.linux-armv7l/wheel/damona/recipes/canu
2021-09-02T16:07:53,078   copying build/lib/damona/recipes/canu/Singularity.canu_1.8.0 -> build/bdist.linux-armv7l/wheel/damona/recipes/canu
2021-09-02T16:07:53,085   creating build/bdist.linux-armv7l/wheel/damona/recipes/ucsc
2021-09-02T16:07:53,087   copying build/lib/damona/recipes/ucsc/registry.yaml -> build/bdist.linux-armv7l/wheel/damona/recipes/ucsc
2021-09-02T16:07:53,093   copying build/lib/damona/recipes/ucsc/Singularity.ucsc_0.1.0 -> build/bdist.linux-armv7l/wheel/damona/recipes/ucsc
2021-09-02T16:07:53,100   creating build/bdist.linux-armv7l/wheel/damona/recipes/kraken
2021-09-02T16:07:53,102   copying build/lib/damona/recipes/kraken/registry.yaml -> build/bdist.linux-armv7l/wheel/damona/recipes/kraken
2021-09-02T16:07:53,108   copying build/lib/damona/recipes/kraken/Singularity.kraken_1.1 -> build/bdist.linux-armv7l/wheel/damona/recipes/kraken
2021-09-02T16:07:53,113   copying build/lib/damona/recipes/kraken/Singularity.kraken_2.0.9 -> build/bdist.linux-armv7l/wheel/damona/recipes/kraken
2021-09-02T16:07:53,118   copying build/lib/damona/recipes/__init__.py -> build/bdist.linux-armv7l/wheel/damona/recipes
2021-09-02T16:07:53,124   creating build/bdist.linux-armv7l/wheel/damona/recipes/sequana_perl_tools
2021-09-02T16:07:53,127   copying build/lib/damona/recipes/sequana_perl_tools/Singularity.sequana_perl_tools_0.1.0 -> build/bdist.linux-armv7l/wheel/damona/recipes/sequana_perl_tools
2021-09-02T16:07:53,133   copying build/lib/damona/recipes/sequana_perl_tools/registry.yaml -> build/bdist.linux-armv7l/wheel/damona/recipes/sequana_perl_tools
2021-09-02T16:07:53,140   creating build/bdist.linux-armv7l/wheel/damona/recipes/hisat2
2021-09-02T16:07:53,141   copying build/lib/damona/recipes/hisat2/registry.yaml -> build/bdist.linux-armv7l/wheel/damona/recipes/hisat2
2021-09-02T16:07:53,147   creating build/bdist.linux-armv7l/wheel/damona/recipes/damona
2021-09-02T16:07:53,148   copying build/lib/damona/recipes/damona/registry.yaml -> build/bdist.linux-armv7l/wheel/damona/recipes/damona
2021-09-02T16:07:53,153   copying build/lib/damona/recipes/damona/Singularity.damona_0.3.0 -> build/bdist.linux-armv7l/wheel/damona/recipes/damona
2021-09-02T16:07:53,156   copying build/lib/damona/recipes/damona/Singularity.damona_0.4.2 -> build/bdist.linux-armv7l/wheel/damona/recipes/damona
2021-09-02T16:07:53,162   creating build/bdist.linux-armv7l/wheel/damona/recipes/conda
2021-09-02T16:07:53,164   copying build/lib/damona/recipes/conda/registry.yaml -> build/bdist.linux-armv7l/wheel/damona/recipes/conda
2021-09-02T16:07:53,170   copying build/lib/damona/recipes/conda/Singularity.conda_4.7.12 -> build/bdist.linux-armv7l/wheel/damona/recipes/conda
2021-09-02T16:07:53,176   copying build/lib/damona/recipes/conda/Singularity.conda_4.9.2 -> build/bdist.linux-armv7l/wheel/damona/recipes/conda
2021-09-02T16:07:53,183   creating build/bdist.linux-armv7l/wheel/damona/recipes/rnaseqc
2021-09-02T16:07:53,186   copying build/lib/damona/recipes/rnaseqc/registry.yaml -> build/bdist.linux-armv7l/wheel/damona/recipes/rnaseqc
2021-09-02T16:07:53,192   copying build/lib/damona/recipes/rnaseqc/Singularity.rnaseqc_2.35.0 -> build/bdist.linux-armv7l/wheel/damona/recipes/rnaseqc
2021-09-02T16:07:53,199   creating build/bdist.linux-armv7l/wheel/damona/recipes/sequana_tools
2021-09-02T16:07:53,201   copying build/lib/damona/recipes/sequana_tools/registry.yaml -> build/bdist.linux-armv7l/wheel/damona/recipes/sequana_tools
2021-09-02T16:07:53,206   copying build/lib/damona/recipes/sequana_tools/Singularity.sequana_tools_0.10.0 -> build/bdist.linux-armv7l/wheel/damona/recipes/sequana_tools
2021-09-02T16:07:53,210   copying build/lib/damona/recipes/sequana_tools/Singularity.sequana_tools_0.11.0 -> build/bdist.linux-armv7l/wheel/damona/recipes/sequana_tools
2021-09-02T16:07:53,214   copying build/lib/damona/recipes/sequana_tools/Singularity.sequana_tools_0.9.0 -> build/bdist.linux-armv7l/wheel/damona/recipes/sequana_tools
2021-09-02T16:07:53,220   creating build/bdist.linux-armv7l/wheel/damona/recipes/trf
2021-09-02T16:07:53,222   copying build/lib/damona/recipes/trf/Singularity.trf_4.10.0 -> build/bdist.linux-armv7l/wheel/damona/recipes/trf
2021-09-02T16:07:53,228   copying build/lib/damona/recipes/trf/registry.yaml -> build/bdist.linux-armv7l/wheel/damona/recipes/trf
2021-09-02T16:07:53,233   copying build/lib/damona/recipes/trf/Singularity.trf_4.09 -> build/bdist.linux-armv7l/wheel/damona/recipes/trf
2021-09-02T16:07:53,240   creating build/bdist.linux-armv7l/wheel/damona/recipes/fastqc
2021-09-02T16:07:53,243   copying build/lib/damona/recipes/fastqc/registry.yaml -> build/bdist.linux-armv7l/wheel/damona/recipes/fastqc
2021-09-02T16:07:53,249   copying build/lib/damona/recipes/fastqc/Singularity.fastqc_0.11.9 -> build/bdist.linux-armv7l/wheel/damona/recipes/fastqc
2021-09-02T16:07:53,254   copying build/lib/damona/recipes/fastqc/Singularity.fastqc_0.11.8 -> build/bdist.linux-armv7l/wheel/damona/recipes/fastqc
2021-09-02T16:07:53,261   creating build/bdist.linux-armv7l/wheel/damona/recipes/prokka
2021-09-02T16:07:53,264   copying build/lib/damona/recipes/prokka/Singularity.prokka_1.14.5 -> build/bdist.linux-armv7l/wheel/damona/recipes/prokka
2021-09-02T16:07:53,270   copying build/lib/damona/recipes/prokka/registry.yaml -> build/bdist.linux-armv7l/wheel/damona/recipes/prokka
2021-09-02T16:07:53,277   creating build/bdist.linux-armv7l/wheel/damona/recipes/falco
2021-09-02T16:07:53,279   copying build/lib/damona/recipes/falco/registry.yaml -> build/bdist.linux-armv7l/wheel/damona/recipes/falco
2021-09-02T16:07:53,285   copying build/lib/damona/recipes/falco/Singularity.falco_0.2.1 -> build/bdist.linux-armv7l/wheel/damona/recipes/falco
2021-09-02T16:07:53,292   creating build/bdist.linux-armv7l/wheel/damona/recipes/bcl2fastq
2021-09-02T16:07:53,295   copying build/lib/damona/recipes/bcl2fastq/registry.yaml -> build/bdist.linux-armv7l/wheel/damona/recipes/bcl2fastq
2021-09-02T16:07:53,301   copying build/lib/damona/recipes/bcl2fastq/Singularity.bcl2fastq_2.20.0 -> build/bdist.linux-armv7l/wheel/damona/recipes/bcl2fastq
2021-09-02T16:07:53,308   creating build/bdist.linux-armv7l/wheel/damona/recipes/phantompeakqualtools
2021-09-02T16:07:53,311   copying build/lib/damona/recipes/phantompeakqualtools/registry.yaml -> build/bdist.linux-armv7l/wheel/damona/recipes/phantompeakqualtools
2021-09-02T16:07:53,317   copying build/lib/damona/recipes/phantompeakqualtools/Singularity.phantompeakqualtools_1.2.2 -> build/bdist.linux-armv7l/wheel/damona/recipes/phantompeakqualtools
2021-09-02T16:07:53,324   creating build/bdist.linux-armv7l/wheel/damona/recipes/graphviz
2021-09-02T16:07:53,326   copying build/lib/damona/recipes/graphviz/registry.yaml -> build/bdist.linux-armv7l/wheel/damona/recipes/graphviz
2021-09-02T16:07:53,333   copying build/lib/damona/recipes/graphviz/Singularity.graphviz_2.43.0 -> build/bdist.linux-armv7l/wheel/damona/recipes/graphviz
2021-09-02T16:07:53,340   creating build/bdist.linux-armv7l/wheel/damona/recipes/gffread
2021-09-02T16:07:53,342   copying build/lib/damona/recipes/gffread/registry.yaml -> build/bdist.linux-armv7l/wheel/damona/recipes/gffread
2021-09-02T16:07:53,348   copying build/lib/damona/recipes/gffread/Singularity.gffread_0.12.1 -> build/bdist.linux-armv7l/wheel/damona/recipes/gffread
2021-09-02T16:07:53,355   creating build/bdist.linux-armv7l/wheel/damona/recipes/salmon
2021-09-02T16:07:53,358   copying build/lib/damona/recipes/salmon/registry.yaml -> build/bdist.linux-armv7l/wheel/damona/recipes/salmon
2021-09-02T16:07:53,364   copying build/lib/damona/recipes/salmon/Singularity.salmon_1.3.0 -> build/bdist.linux-armv7l/wheel/damona/recipes/salmon
2021-09-02T16:07:53,369   running install_egg_info
2021-09-02T16:07:53,386   running egg_info
2021-09-02T16:07:53,388   writing damona.egg-info/PKG-INFO
2021-09-02T16:07:53,394   writing entry points to damona.egg-info/entry_points.txt
2021-09-02T16:07:53,397   writing top-level names to damona.egg-info/top_level.txt
2021-09-02T16:07:53,400   writing requirements to damona.egg-info/requires.txt
2021-09-02T16:07:53,402   writing dependency_links to damona.egg-info/dependency_links.txt
2021-09-02T16:07:53,431   reading manifest file 'damona.egg-info/SOURCES.txt'
2021-09-02T16:07:53,439   reading manifest template 'MANIFEST.in'
2021-09-02T16:07:53,442   warning: no previously-included files matching '__pycache__' found under directory '*'
2021-09-02T16:07:53,444   warning: no previously-included files matching '*pyc' found under directory '*'
2021-09-02T16:07:53,464   writing manifest file 'damona.egg-info/SOURCES.txt'
2021-09-02T16:07:53,467   Copying damona.egg-info to build/bdist.linux-armv7l/wheel/damona-0.5.4-py3.5.egg-info
2021-09-02T16:07:53,505   running install_scripts
2021-09-02T16:07:53,637   creating build/bdist.linux-armv7l/wheel/damona-0.5.4.dist-info/WHEEL
2021-09-02T16:07:54,220   Building wheel for damona (setup.py): finished with status 'done'
2021-09-02T16:07:54,226   Created wheel for damona: filename=damona-0.5.4-py3-none-any.whl size=70072 sha256=d6be5e498a49e3228ff56e0445cf57642d10bfb8a523b4f6839f5998051feb50
2021-09-02T16:07:54,226   Stored in directory: /tmp/pip-ephem-wheel-cache-05hnygab/wheels/e3/e5/99/02bf5af4233095ad4e324a873a131cafbaacfa1bc39f9059e5
2021-09-02T16:07:54,253 Successfully built damona
2021-09-02T16:07:54,269 Removed build tracker: '/tmp/pip-req-tracker-62qxrxl5'