2021-09-03T10:27:30,365 Created temporary directory: /tmp/pip-ephem-wheel-cache-ma9a3yo0
2021-09-03T10:27:30,368 Created temporary directory: /tmp/pip-req-tracker-ox5uak73
2021-09-03T10:27:30,368 Initialized build tracking at /tmp/pip-req-tracker-ox5uak73
2021-09-03T10:27:30,368 Created build tracker: /tmp/pip-req-tracker-ox5uak73
2021-09-03T10:27:30,368 Entered build tracker: /tmp/pip-req-tracker-ox5uak73
2021-09-03T10:27:30,369 Created temporary directory: /tmp/pip-wheel-irzp7gv2
2021-09-03T10:27:30,403 Looking in indexes: https://pypi.org/simple, https://www.piwheels.org/simple
2021-09-03T10:27:30,406 2 location(s) to search for versions of modbampy:
2021-09-03T10:27:30,406 * https://pypi.org/simple/modbampy/
2021-09-03T10:27:30,406 * https://www.piwheels.org/simple/modbampy/
2021-09-03T10:27:30,406 Fetching project page and analyzing links: https://pypi.org/simple/modbampy/
2021-09-03T10:27:30,407 Getting page https://pypi.org/simple/modbampy/
2021-09-03T10:27:30,408 Found index url https://pypi.org/simple
2021-09-03T10:27:30,506   Skipping link: No binaries permitted for modbampy: https://files.pythonhosted.org/packages/cb/92/01d1ec72f52cd9d18713cfd5c7bb064ea70fe031fe238e265112fcd3beb2/modbampy-0.2.1-cp36-cp36m-manylinux_2_12_x86_64.manylinux2010_x86_64.whl#sha256=46d4c2c5add64b1c7fba490404ff463b777a1d3f57fe0c645aa5c4563f441263 (from https://pypi.org/simple/modbampy/)
2021-09-03T10:27:30,507   Skipping link: No binaries permitted for modbampy: https://files.pythonhosted.org/packages/35/0e/280e5b17b0bc460560075c77da9bd9299b6b7dcb0c061740a94f8b23c90e/modbampy-0.2.1-cp37-cp37m-manylinux_2_12_x86_64.manylinux2010_x86_64.whl#sha256=68b2f71492f7c491ce50d7652b203b4e1acfb5a39bee3d636caa1e812a2bc912 (from https://pypi.org/simple/modbampy/)
2021-09-03T10:27:30,507   Skipping link: No binaries permitted for modbampy: https://files.pythonhosted.org/packages/01/ef/99be5f576ff7db0f873bc7713921bffd2742fc5ccd6ab381f35a99c41854/modbampy-0.2.1-cp38-cp38-manylinux_2_12_x86_64.manylinux2010_x86_64.whl#sha256=52b6a20f924a029863c27bd2b9bb77174f19ae40f77902730d00befdfdd266f0 (from https://pypi.org/simple/modbampy/)
2021-09-03T10:27:30,507   Found link https://files.pythonhosted.org/packages/55/94/2b556fdd57566fec19f24653c37958d07292542dcc35a3c31b9a984ba0d0/modbampy-0.2.1.tar.gz#sha256=3f325673e6337e2d67fb09e7004f718a4d4d9a82a30ea49b40545c19bd78ed11 (from https://pypi.org/simple/modbampy/), version: 0.2.1
2021-09-03T10:27:30,508   Skipping link: No binaries permitted for modbampy: https://files.pythonhosted.org/packages/c2/ce/c3ebc2ce18ca8939e9e0710df6a8fea088c82aa4ca37e9f1eba32ddb5bc2/modbampy-0.2.2-cp36-cp36m-manylinux_2_12_x86_64.manylinux2010_x86_64.whl#sha256=811cfd1d021a6d0f8efdf8a88648896836c21cc9d3b0b11f7101c360967892d3 (from https://pypi.org/simple/modbampy/)
2021-09-03T10:27:30,508   Skipping link: No binaries permitted for modbampy: https://files.pythonhosted.org/packages/eb/10/c44dbeeee9dccadf0568f16f4a6776fca103e9a34ebb1e9fdcdeb7cddd7d/modbampy-0.2.2-cp37-cp37m-manylinux_2_12_x86_64.manylinux2010_x86_64.whl#sha256=2686f294fed887deedff963eaea42dbff5c9bdc218986c311fd46325bbea57f4 (from https://pypi.org/simple/modbampy/)
2021-09-03T10:27:30,508   Skipping link: No binaries permitted for modbampy: https://files.pythonhosted.org/packages/ce/d8/aa825e1ffd01346e323289eac83ed091d3927e86f4b621335c1eecef6090/modbampy-0.2.2-cp38-cp38-manylinux_2_12_x86_64.manylinux2010_x86_64.whl#sha256=c1bfda8e2105867ea207b701959dce3fca32f528cdc00a32bde9e48dca18be22 (from https://pypi.org/simple/modbampy/)
2021-09-03T10:27:30,508   Found link https://files.pythonhosted.org/packages/4f/e8/ba726f9225c971fa4c82d0bb1ac45735bce2a1894f1d735e03f175f61147/modbampy-0.2.2.tar.gz#sha256=ec77ba3ee07e4e03d8b8d4341ceb15c775f0c89fa059fcacbf9f1ce58260924b (from https://pypi.org/simple/modbampy/), version: 0.2.2
2021-09-03T10:27:30,509   Skipping link: No binaries permitted for modbampy: https://files.pythonhosted.org/packages/c0/20/e32f4cb98c5dd7b421f1e9f9800fb3e617b333b82fff52e96d4f8761257e/modbampy-0.3.0-cp36-cp36m-manylinux_2_12_x86_64.manylinux2010_x86_64.whl#sha256=2083b5d79443f47978846e3ecca3d0567b0c5d473b4fa4b3fe6e9802dbebcdf9 (from https://pypi.org/simple/modbampy/)
2021-09-03T10:27:30,509   Skipping link: No binaries permitted for modbampy: https://files.pythonhosted.org/packages/69/5d/abe04396191bfc1cbee3fed85295fcde0c2524778f76c6bf432bdf84644f/modbampy-0.3.0-cp37-cp37m-manylinux_2_12_x86_64.manylinux2010_x86_64.whl#sha256=9bd2e72a022f594d5afa043cea69876ddfd7b5db2a1901e5ba2952dd2b1b9cdc (from https://pypi.org/simple/modbampy/)
2021-09-03T10:27:30,509   Skipping link: No binaries permitted for modbampy: https://files.pythonhosted.org/packages/68/3e/26333f7e1a7d0bcd46b80085cd49f68aa614515f6786eb52e7273c17f610/modbampy-0.3.0-cp38-cp38-manylinux_2_12_x86_64.manylinux2010_x86_64.whl#sha256=9092bcd8b34e47177b63869610d462424d5d9bb863306c3e35da784081126fd1 (from https://pypi.org/simple/modbampy/)
2021-09-03T10:27:30,510   Found link https://files.pythonhosted.org/packages/a0/13/e81a05129f3852cc33ecf47a4d9de8c6cc3027ffbee86110a42cd7c462d0/modbampy-0.3.0.tar.gz#sha256=ec837d78a21817e99532a348b7ad44c28b3650ba0fe0d5df3b2c8dd819ad1fed (from https://pypi.org/simple/modbampy/), version: 0.3.0
2021-09-03T10:27:30,510   Skipping link: No binaries permitted for modbampy: https://files.pythonhosted.org/packages/6b/df/13ca551e50bcd1ad0d4f9d065aff6678e6abd34c01afcbe509b754829c3c/modbampy-0.3.1-cp36-cp36m-manylinux_2_12_x86_64.manylinux2010_x86_64.whl#sha256=a63027e365006da18b0af107c7085b80f5f571c9a0f611cdb0981a1ca35f92f6 (from https://pypi.org/simple/modbampy/)
2021-09-03T10:27:30,510   Skipping link: No binaries permitted for modbampy: https://files.pythonhosted.org/packages/c1/a3/75e6a684a93e4e1e0d84495b67adc77d0a03964eb66823357eb80b8f3686/modbampy-0.3.1-cp37-cp37m-manylinux_2_12_x86_64.manylinux2010_x86_64.whl#sha256=e998fc3ec582ef7442f3a91bbd39e84a38a212ac13bcba74c0d23f6fac4e82b9 (from https://pypi.org/simple/modbampy/)
2021-09-03T10:27:30,510   Skipping link: No binaries permitted for modbampy: https://files.pythonhosted.org/packages/1c/af/f164876eee34ef60a2d31ca8d853bd9bfbd6b93b397826abda65c953f486/modbampy-0.3.1-cp38-cp38-manylinux_2_12_x86_64.manylinux2010_x86_64.whl#sha256=bb5d1fbf9c85af16f985ae1ae3b83002921d642b87ffe6c4ac2723df5d2f3e04 (from https://pypi.org/simple/modbampy/)
2021-09-03T10:27:30,511   Found link https://files.pythonhosted.org/packages/15/10/6e0cde7c584add268b4382bd2ad6220e0161c0656da73aae80a063ba6a9b/modbampy-0.3.1.tar.gz#sha256=a078dd752832e119df50ee56da5f5db85e1b3687c77405e9fae30a6ed79c00f2 (from https://pypi.org/simple/modbampy/), version: 0.3.1
2021-09-03T10:27:30,511 Fetching project page and analyzing links: https://www.piwheels.org/simple/modbampy/
2021-09-03T10:27:30,511 Getting page https://www.piwheels.org/simple/modbampy/
2021-09-03T10:27:30,512 Found index url https://www.piwheels.org/simple
2021-09-03T10:27:30,628 Skipping link: not a file: https://www.piwheels.org/simple/modbampy/
2021-09-03T10:27:30,629 Skipping link: not a file: https://pypi.org/simple/modbampy/
2021-09-03T10:27:30,648 Given no hashes to check 1 links for project 'modbampy': discarding no candidates
2021-09-03T10:27:30,666 Collecting modbampy==0.3.1
2021-09-03T10:27:30,668   Created temporary directory: /tmp/pip-unpack-orbns1da
2021-09-03T10:27:30,709   Downloading modbampy-0.3.1.tar.gz (804 kB)
2021-09-03T10:27:31,455   Added modbampy==0.3.1 from https://files.pythonhosted.org/packages/15/10/6e0cde7c584add268b4382bd2ad6220e0161c0656da73aae80a063ba6a9b/modbampy-0.3.1.tar.gz#sha256=a078dd752832e119df50ee56da5f5db85e1b3687c77405e9fae30a6ed79c00f2 to build tracker '/tmp/pip-req-tracker-ox5uak73'
2021-09-03T10:27:31,456     Running setup.py (path:/tmp/pip-wheel-irzp7gv2/modbampy_04bde4ed266b4d10a6cfc940c5ad7e07/setup.py) egg_info for package modbampy
2021-09-03T10:27:31,457     Created temporary directory: /tmp/pip-pip-egg-info-1j1h_nho
2021-09-03T10:27:31,457     Running command python setup.py egg_info
2021-09-03T10:27:32,507     /usr/lib/python3/dist-packages/cffi/cparser.py:154: UserWarning: String literal found in cdef() or type source. String literals are ignored here, but you should remove them anyway because some character sequences confuse pre-parsing.
2021-09-03T10:27:32,508       warnings.warn("String literal found in cdef() or type source. "
2021-09-03T10:27:32,652     running egg_info
2021-09-03T10:27:32,655     creating /tmp/pip-pip-egg-info-1j1h_nho/modbampy.egg-info
2021-09-03T10:27:32,656     writing /tmp/pip-pip-egg-info-1j1h_nho/modbampy.egg-info/PKG-INFO
2021-09-03T10:27:32,659     writing dependency_links to /tmp/pip-pip-egg-info-1j1h_nho/modbampy.egg-info/dependency_links.txt
2021-09-03T10:27:32,661     writing entry points to /tmp/pip-pip-egg-info-1j1h_nho/modbampy.egg-info/entry_points.txt
2021-09-03T10:27:32,662     writing requirements to /tmp/pip-pip-egg-info-1j1h_nho/modbampy.egg-info/requires.txt
2021-09-03T10:27:32,663     writing top-level names to /tmp/pip-pip-egg-info-1j1h_nho/modbampy.egg-info/top_level.txt
2021-09-03T10:27:32,665     writing manifest file '/tmp/pip-pip-egg-info-1j1h_nho/modbampy.egg-info/SOURCES.txt'
2021-09-03T10:27:32,822     reading manifest file '/tmp/pip-pip-egg-info-1j1h_nho/modbampy.egg-info/SOURCES.txt'
2021-09-03T10:27:32,824     reading manifest template 'MANIFEST.in'
2021-09-03T10:27:32,827     warning: no files found matching 'LICENSE.md'
2021-09-03T10:27:32,844     no previously-included directories found matching 'htslib/test'
2021-09-03T10:27:32,845     no previously-included directories found matching 'htslib/htscodecs/tests'
2021-09-03T10:27:32,846     no previously-included directories found matching 'build'
2021-09-03T10:27:32,847     no previously-included directories found matching 'docs'
2021-09-03T10:27:32,847     adding license file 'LICENSE'
2021-09-03T10:27:32,855     writing manifest file '/tmp/pip-pip-egg-info-1j1h_nho/modbampy.egg-info/SOURCES.txt'
2021-09-03T10:27:32,940   Source in /tmp/pip-wheel-irzp7gv2/modbampy_04bde4ed266b4d10a6cfc940c5ad7e07 has version 0.3.1, which satisfies requirement modbampy==0.3.1 from https://files.pythonhosted.org/packages/15/10/6e0cde7c584add268b4382bd2ad6220e0161c0656da73aae80a063ba6a9b/modbampy-0.3.1.tar.gz#sha256=a078dd752832e119df50ee56da5f5db85e1b3687c77405e9fae30a6ed79c00f2
2021-09-03T10:27:32,941   Removed modbampy==0.3.1 from https://files.pythonhosted.org/packages/15/10/6e0cde7c584add268b4382bd2ad6220e0161c0656da73aae80a063ba6a9b/modbampy-0.3.1.tar.gz#sha256=a078dd752832e119df50ee56da5f5db85e1b3687c77405e9fae30a6ed79c00f2 from build tracker '/tmp/pip-req-tracker-ox5uak73'
2021-09-03T10:27:32,946 Created temporary directory: /tmp/pip-unpack-dovcxdii
2021-09-03T10:27:32,947 Building wheels for collected packages: modbampy
2021-09-03T10:27:32,951   Created temporary directory: /tmp/pip-wheel-kk9rxkae
2021-09-03T10:27:32,952   Building wheel for modbampy (setup.py): started
2021-09-03T10:27:32,952   Destination directory: /tmp/pip-wheel-kk9rxkae
2021-09-03T10:27:32,952   Running command /usr/bin/python3 -u -c 'import io, os, sys, setuptools, tokenize; sys.argv[0] = '"'"'/tmp/pip-wheel-irzp7gv2/modbampy_04bde4ed266b4d10a6cfc940c5ad7e07/setup.py'"'"'; __file__='"'"'/tmp/pip-wheel-irzp7gv2/modbampy_04bde4ed266b4d10a6cfc940c5ad7e07/setup.py'"'"';f = getattr(tokenize, '"'"'open'"'"', open)(__file__) if os.path.exists(__file__) else io.StringIO('"'"'from setuptools import setup; setup()'"'"');code = f.read().replace('"'"'\r\n'"'"', '"'"'\n'"'"');f.close();exec(compile(code, __file__, '"'"'exec'"'"'))' bdist_wheel -d /tmp/pip-wheel-kk9rxkae
2021-09-03T10:27:33,926   /usr/lib/python3/dist-packages/cffi/cparser.py:154: UserWarning: String literal found in cdef() or type source. String literals are ignored here, but you should remove them anyway because some character sequences confuse pre-parsing.
2021-09-03T10:27:33,927     warnings.warn("String literal found in cdef() or type source. "
2021-09-03T10:27:34,075   running bdist_wheel
2021-09-03T10:27:34,080   running build
2021-09-03T10:27:34,080   running build_py
2021-09-03T10:27:34,220   creating build
2021-09-03T10:27:34,220   creating build/lib.linux-armv7l-3.9
2021-09-03T10:27:34,221   creating build/lib.linux-armv7l-3.9/modbampy
2021-09-03T10:27:34,222   copying modbampy/__init__.py -> build/lib.linux-armv7l-3.9/modbampy
2021-09-03T10:27:34,225   running build_ext
2021-09-03T10:27:34,226   generating cffi module 'build/temp.linux-armv7l-3.9/libmodbampy.c'
2021-09-03T10:27:34,226   creating build/temp.linux-armv7l-3.9
2021-09-03T10:27:34,249   Compiling htslib using Makefile
2021-09-03T10:27:34,281   Compiling libhts.a
2021-09-03T10:27:34,282   cd htslib/ \
2021-09-03T10:27:34,282   	&& autoheader \
2021-09-03T10:27:34,282   	&& autoconf \
2021-09-03T10:27:34,282   	&& CFLAGS="-fpic -msse3 -O3 -std=c99 " ./configure  \
2021-09-03T10:27:34,282   	&& make -j 4
2021-09-03T10:27:36,344   checking for gcc... gcc
2021-09-03T10:27:36,520   checking whether the C compiler works... no
2021-09-03T10:27:36,529   configure: error: in `/tmp/pip-wheel-irzp7gv2/modbampy_04bde4ed266b4d10a6cfc940c5ad7e07/htslib':
2021-09-03T10:27:36,530   configure: error: C compiler cannot create executables
2021-09-03T10:27:36,530   See `config.log' for more details
2021-09-03T10:27:36,611   make: *** [Makefile:24: htslib/libhts.a] Error 77
2021-09-03T10:27:36,613   Traceback (most recent call last):
2021-09-03T10:27:36,613     File "<string>", line 1, in <module>
2021-09-03T10:27:36,614     File "/tmp/pip-wheel-irzp7gv2/modbampy_04bde4ed266b4d10a6cfc940c5ad7e07/setup.py", line 61, in <module>
2021-09-03T10:27:36,614       setup(
2021-09-03T10:27:36,615     File "/usr/local/lib/python3.9/dist-packages/setuptools/__init__.py", line 153, in setup
2021-09-03T10:27:36,615       return distutils.core.setup(**attrs)
2021-09-03T10:27:36,616     File "/usr/lib/python3.9/distutils/core.py", line 148, in setup
2021-09-03T10:27:36,616       dist.run_commands()
2021-09-03T10:27:36,617     File "/usr/lib/python3.9/distutils/dist.py", line 966, in run_commands
2021-09-03T10:27:36,618       self.run_command(cmd)
2021-09-03T10:27:36,618     File "/usr/lib/python3.9/distutils/dist.py", line 985, in run_command
2021-09-03T10:27:36,619       cmd_obj.run()
2021-09-03T10:27:36,620     File "/usr/lib/python3/dist-packages/wheel/bdist_wheel.py", line 223, in run
2021-09-03T10:27:36,620       self.run_command('build')
2021-09-03T10:27:36,621     File "/usr/lib/python3.9/distutils/cmd.py", line 313, in run_command
2021-09-03T10:27:36,621       self.distribution.run_command(command)
2021-09-03T10:27:36,622     File "/usr/lib/python3.9/distutils/dist.py", line 985, in run_command
2021-09-03T10:27:36,623       cmd_obj.run()
2021-09-03T10:27:36,623     File "/usr/lib/python3.9/distutils/command/build.py", line 135, in run
2021-09-03T10:27:36,624       self.run_command(cmd_name)
2021-09-03T10:27:36,624     File "/usr/lib/python3.9/distutils/cmd.py", line 313, in run_command
2021-09-03T10:27:36,624       self.distribution.run_command(command)
2021-09-03T10:27:36,625     File "/usr/lib/python3.9/distutils/dist.py", line 985, in run_command
2021-09-03T10:27:36,626       cmd_obj.run()
2021-09-03T10:27:36,626     File "/usr/lib/python3/dist-packages/cffi/setuptools_ext.py", line 144, in run
2021-09-03T10:27:36,632       base_class.run(self)
2021-09-03T10:27:36,632     File "/tmp/pip-wheel-irzp7gv2/modbampy_04bde4ed266b4d10a6cfc940c5ad7e07/setup.py", line 57, in run
2021-09-03T10:27:36,632       self.execute(compile_hts, [], 'Compiling htslib using Makefile')
2021-09-03T10:27:36,633     File "/usr/lib/python3.9/distutils/cmd.py", line 335, in execute
2021-09-03T10:27:36,633       util.execute(func, args, msg, dry_run=self.dry_run)
2021-09-03T10:27:36,633     File "/usr/lib/python3.9/distutils/util.py", line 304, in execute
2021-09-03T10:27:36,641       func(*args)
2021-09-03T10:27:36,642     File "/tmp/pip-wheel-irzp7gv2/modbampy_04bde4ed266b4d10a6cfc940c5ad7e07/setup.py", line 55, in compile_hts
2021-09-03T10:27:36,642       subprocess.check_call(['make', os.path.join('htslib', 'libhts.a'), 'pymod.a'])
2021-09-03T10:27:36,642     File "/usr/lib/python3.9/subprocess.py", line 373, in check_call
2021-09-03T10:27:36,643       raise CalledProcessError(retcode, cmd)
2021-09-03T10:27:36,643   subprocess.CalledProcessError: Command '['make', 'htslib/libhts.a', 'pymod.a']' returned non-zero exit status 2.
2021-09-03T10:27:36,739   Building wheel for modbampy (setup.py): finished with status 'error'
2021-09-03T10:27:36,740   ERROR: Failed building wheel for modbampy
2021-09-03T10:27:36,741   Running setup.py clean for modbampy
2021-09-03T10:27:36,741   Running command /usr/bin/python3 -u -c 'import io, os, sys, setuptools, tokenize; sys.argv[0] = '"'"'/tmp/pip-wheel-irzp7gv2/modbampy_04bde4ed266b4d10a6cfc940c5ad7e07/setup.py'"'"'; __file__='"'"'/tmp/pip-wheel-irzp7gv2/modbampy_04bde4ed266b4d10a6cfc940c5ad7e07/setup.py'"'"';f = getattr(tokenize, '"'"'open'"'"', open)(__file__) if os.path.exists(__file__) else io.StringIO('"'"'from setuptools import setup; setup()'"'"');code = f.read().replace('"'"'\r\n'"'"', '"'"'\n'"'"');f.close();exec(compile(code, __file__, '"'"'exec'"'"'))' clean --all
2021-09-03T10:27:37,719   /usr/lib/python3/dist-packages/cffi/cparser.py:154: UserWarning: String literal found in cdef() or type source. String literals are ignored here, but you should remove them anyway because some character sequences confuse pre-parsing.
2021-09-03T10:27:37,720     warnings.warn("String literal found in cdef() or type source. "
2021-09-03T10:27:37,843   running clean
2021-09-03T10:27:37,845   removing 'build/temp.linux-armv7l-3.9' (and everything under it)
2021-09-03T10:27:37,847   removing 'build/lib.linux-armv7l-3.9' (and everything under it)
2021-09-03T10:27:37,849   'build/bdist.linux-armv7l' does not exist -- can't clean it
2021-09-03T10:27:37,849   'build/scripts-3.9' does not exist -- can't clean it
2021-09-03T10:27:37,849   removing 'build'
2021-09-03T10:27:37,924 Failed to build modbampy
2021-09-03T10:27:37,924 ERROR: Failed to build one or more wheels
2021-09-03T10:27:37,925 Exception information:
2021-09-03T10:27:37,925 Traceback (most recent call last):
2021-09-03T10:27:37,925   File "/usr/local/lib/python3.9/dist-packages/pip/_internal/cli/base_command.py", line 180, in _main
2021-09-03T10:27:37,925     status = self.run(options, args)
2021-09-03T10:27:37,925   File "/usr/local/lib/python3.9/dist-packages/pip/_internal/cli/req_command.py", line 205, in wrapper
2021-09-03T10:27:37,925     return func(self, options, args)
2021-09-03T10:27:37,925   File "/usr/local/lib/python3.9/dist-packages/pip/_internal/commands/wheel.py", line 174, in run
2021-09-03T10:27:37,925     raise CommandError(
2021-09-03T10:27:37,925 pip._internal.exceptions.CommandError: Failed to build one or more wheels
2021-09-03T10:27:37,928 Removed build tracker: '/tmp/pip-req-tracker-ox5uak73'