2021-09-03T17:49:44,113 Created temporary directory: /tmp/pip-ephem-wheel-cache-jbm4kqwr
2021-09-03T17:49:44,120 Created temporary directory: /tmp/pip-req-tracker-tcz7fjug
2021-09-03T17:49:44,120 Initialized build tracking at /tmp/pip-req-tracker-tcz7fjug
2021-09-03T17:49:44,121 Created build tracker: /tmp/pip-req-tracker-tcz7fjug
2021-09-03T17:49:44,121 Entered build tracker: /tmp/pip-req-tracker-tcz7fjug
2021-09-03T17:49:44,123 Created temporary directory: /tmp/pip-wheel-1y8iq4hp
2021-09-03T17:49:44,179 Looking in indexes: https://pypi.org/simple, https://www.piwheels.org/simple
2021-09-03T17:49:44,182 2 location(s) to search for versions of pele-platform:
2021-09-03T17:49:44,182 * https://pypi.org/simple/pele-platform/
2021-09-03T17:49:44,182 * https://www.piwheels.org/simple/pele-platform/
2021-09-03T17:49:44,183 Fetching project page and analyzing links: https://pypi.org/simple/pele-platform/
2021-09-03T17:49:44,186 Getting page https://pypi.org/simple/pele-platform/
2021-09-03T17:49:44,190 Found index url https://pypi.org/simple
2021-09-03T17:49:44,561   Found link https://files.pythonhosted.org/packages/f0/ac/9497572d7da4e501c8dddc3be3fa338744dbc27b67eb09275b8375fae2fd/pele_platform-1.0.0.1.tar.gz#sha256=e3c8bde654fe3d249714c4ddb1d3471944752f6840a6bcf4b399a3466931b838 (from https://pypi.org/simple/pele-platform/), version: 1.0.0.1
2021-09-03T17:49:44,562   Found link https://files.pythonhosted.org/packages/79/a0/d1b4b9269c3fe9dd2edc878a2dec9d3f4e7701cc932272169f44a025c2a9/pele_platform-1.0.0.2.tar.gz#sha256=919f487c943e6e71a8d82e56dac3051605ffdc6a680d168b5233cea95c9e4701 (from https://pypi.org/simple/pele-platform/), version: 1.0.0.2
2021-09-03T17:49:44,563   Found link https://files.pythonhosted.org/packages/a3/56/3cc9eb3b0ecf0943c4f4eb5b0729cd54906290f84dc4cfb230ad69ce99c6/pele_platform-1.0.0.3.tar.gz#sha256=ea4f3df0aeb65812e72eb9b24605146a7afeeb7f89ce7f769058c2e894654239 (from https://pypi.org/simple/pele-platform/), version: 1.0.0.3
2021-09-03T17:49:44,564   Found link https://files.pythonhosted.org/packages/d0/6d/1ac79163749b10c7f694dde1db24063d4e2f57bcf365db1b8cfa1b9f7f57/pele_platform-1.1.0.tar.gz#sha256=25a644fc27c0c364bfece9addd278a74a5a7ea5f4ab40b31fa8cd961e7485a65 (from https://pypi.org/simple/pele-platform/), version: 1.1.0
2021-09-03T17:49:44,565   Found link https://files.pythonhosted.org/packages/fd/15/306ea35b1d4be507caf1613d05fc16c076f070c2a16e6283a331695fcb5e/pele_platform-1.2.0.tar.gz#sha256=2967a976bafc47884ca49864ca87d40d87aa50c2fc57900c1f0517e84e789153 (from https://pypi.org/simple/pele-platform/), version: 1.2.0
2021-09-03T17:49:44,566   Found link https://files.pythonhosted.org/packages/74/98/cf2442f668f8ad6be1838c3ce7b87a409eee7448a1d7d033862ad0bda36c/pele_platform-1.2.1.tar.gz#sha256=5d30d563960934362ac79eb7a24b8f4b831076dba29bbb498901a0b0a1dca367 (from https://pypi.org/simple/pele-platform/), version: 1.2.1
2021-09-03T17:49:44,567   Found link https://files.pythonhosted.org/packages/1a/78/29b2eb73308b595668a9c22abd93ac88f82c49ebc6b004f332a774166391/pele_platform-1.2.2.tar.gz#sha256=00f579740db5455cea04c82e86b87c8f53045496ba61d9f4e96436f1d0cdfb08 (from https://pypi.org/simple/pele-platform/), version: 1.2.2
2021-09-03T17:49:44,568   Found link https://files.pythonhosted.org/packages/fb/6b/85f262d33a080377ea5202d5779c9402c23aaefc4e1b04bb94d9432aad42/pele_platform-1.2.3.tar.gz#sha256=18713b6811d7689accb54dde5429aa5225dcb8e520164fd7b4037453c63f74d9 (from https://pypi.org/simple/pele-platform/), version: 1.2.3
2021-09-03T17:49:44,569   Found link https://files.pythonhosted.org/packages/d5/15/707e6b89f0ee479d173ef2fe6a41af1ff9d91dd86e45067da5cee56761d9/pele_platform-1.3.0.tar.gz#sha256=fb7fb5dd59f9e3a76d371be6aa0b013209752c464862bf944de6b2a2903424a9 (from https://pypi.org/simple/pele-platform/), version: 1.3.0
2021-09-03T17:49:44,570   Found link https://files.pythonhosted.org/packages/7c/b0/4fda3001d5f13010bc2005e335f799f24d2204fc700a847e28091b57fabb/pele_platform-1.3.1.tar.gz#sha256=c6c0ac764ae30ce8a0650cdf0fc686fd733cb6b11fc15e6cccd5659166be3b33 (from https://pypi.org/simple/pele-platform/), version: 1.3.1
2021-09-03T17:49:44,571   Found link https://files.pythonhosted.org/packages/34/21/2f68d91d200432e0feb4662f6ba5538817335d86df60688e3a6f050dd21b/pele_platform-1.3.2.tar.gz#sha256=14c6e236347a1101f5de04bc25a32f302904bdb46326fb151c14e930a28d7a48 (from https://pypi.org/simple/pele-platform/), version: 1.3.2
2021-09-03T17:49:44,572   Found link https://files.pythonhosted.org/packages/63/a6/ad0bc781b4089093fd8aca4d75d237e0c0ae9d1f6b7e4b86a733f5a91b10/pele_platform-1.3.3.tar.gz#sha256=9e9e49d359bde42485b1c2d23b8a80c3de43064a672c260d18b9f10b55ee666e (from https://pypi.org/simple/pele-platform/), version: 1.3.3
2021-09-03T17:49:44,573   Found link https://files.pythonhosted.org/packages/e7/6a/4d8e75e0dbff74b22c76f4640a72798acfe6f55e35dcf0e9080dc8f36857/pele_platform-1.3.4.tar.gz#sha256=b8f7a2caac267df0381e8a3d73ddfeaec60cccc22336aa76178dbf3d2b2e880b (from https://pypi.org/simple/pele-platform/), version: 1.3.4
2021-09-03T17:49:44,574   Found link https://files.pythonhosted.org/packages/d2/7d/8f6c7c977288ed554723c003a885c118889c3bf76ac343961a84d330f85e/pele_platform-1.4.0.tar.gz#sha256=0190af77e0e24482742b634d120ac9b52135716bbbc93929bf688313f63e4a59 (from https://pypi.org/simple/pele-platform/), version: 1.4.0
2021-09-03T17:49:44,575   Found link https://files.pythonhosted.org/packages/ed/11/ff7cdcb7a17869082a94fc4c066a8bc6407a07f7c542c1dbc4919b1e091a/pele_platform-1.4.1.tar.gz#sha256=2f5327616aeff5be40d54b2771fd43b8cdb75086944c11800339bd44e0866c01 (from https://pypi.org/simple/pele-platform/), version: 1.4.1
2021-09-03T17:49:44,576   Found link https://files.pythonhosted.org/packages/4b/4f/fec23d74e8b1474fe25234fd34972a427234307dc9f7908f916e50036d81/pele_platform-1.4.2.tar.gz#sha256=c1092fb5c5cdb38736f621c434ff3112ea1cd1abc94d0bfe03ea7044b6e06612 (from https://pypi.org/simple/pele-platform/), version: 1.4.2
2021-09-03T17:49:44,576   Found link https://files.pythonhosted.org/packages/7a/b3/8eeb8c773a4fbf6561a929b8bab563f31384a0512a4708b4d0249ebc8c24/pele_platform-1.4.3.tar.gz#sha256=e491ac06c05301a846084e07ab709abf4b0507768710256443b6523b25339c40 (from https://pypi.org/simple/pele-platform/), version: 1.4.3
2021-09-03T17:49:44,577   Found link https://files.pythonhosted.org/packages/92/57/ff446766add00995f3fa0446f9c32ad52b759bab05d3f41e5ee51a8e76a8/pele_platform-1.4.4.tar.gz#sha256=eca94d45d76664106cff9915781740932635878b203b430d62f7aeb252ce59c7 (from https://pypi.org/simple/pele-platform/), version: 1.4.4
2021-09-03T17:49:44,578   Found link https://files.pythonhosted.org/packages/6d/f3/5ad1c5dab958edc8ecfb75883f8ac760308e570f3a0929104ba01a223f02/pele_platform-1.5.0.tar.gz#sha256=0b7eed2abd70f20caadcf9e9c8642cfc51d55d66ab114e42f0d425bfb6603323 (from https://pypi.org/simple/pele-platform/), version: 1.5.0
2021-09-03T17:49:44,579   Found link https://files.pythonhosted.org/packages/1c/b0/44dcc5184b218a7481babe8cd5738129741e29422e226308a583a3dd5629/pele_platform-1.5.1.tar.gz#sha256=9e138403c8fb65450d9841db279140f046a8325791af9983e202c9002bf44b93 (from https://pypi.org/simple/pele-platform/), version: 1.5.1
2021-09-03T17:49:44,580   Found link https://files.pythonhosted.org/packages/05/85/4cfdad270ebf569727204cbc9de66f22ef802d5079846f2631e1e6a11059/pele_platform-1.6.0b1.tar.gz#sha256=a7b5e566ec00598a1991d44c8748267104e5a123f462365a584632c94b36a7bf (from https://pypi.org/simple/pele-platform/), version: 1.6.0b1
2021-09-03T17:49:44,581   Found link https://files.pythonhosted.org/packages/c0/d6/f49f102325943cd3a82086e4740dfabd416c278d21ef9f3097fc1bb0ba7a/pele_platform-1.6.0b2.tar.gz#sha256=6bf2be383e50f6654f49f87e44dfc548f2aa1f5f002b25089ae2089ab0a92654 (from https://pypi.org/simple/pele-platform/), version: 1.6.0b2
2021-09-03T17:49:44,582   Found link https://files.pythonhosted.org/packages/f7/16/8db67212a622716e71ea8a9664e4da6207ae136369f2d1b3b802ca39baee/pele_platform-1.6.0b3.tar.gz#sha256=916a0f278c53e5eec786008a498654481c2e76b90b4385e75398872fd28b1f6e (from https://pypi.org/simple/pele-platform/), version: 1.6.0b3
2021-09-03T17:49:44,583   Found link https://files.pythonhosted.org/packages/f3/46/ecebcaed96148f710c2aa716f1a4862033073dfe8c1da1c7283d32b766b4/pele_platform-1.6.0b4.tar.gz#sha256=1e6cdaab94470fa0de99010c2e51ed94e1634b14c9a53206b6f33e838616b361 (from https://pypi.org/simple/pele-platform/), version: 1.6.0b4
2021-09-03T17:49:44,584   Found link https://files.pythonhosted.org/packages/7a/03/3f391e98e553a1cea233c87fe3d33171be5b3851fbf37869ccdfebca58c4/pele_platform-1.6.0b5.tar.gz#sha256=9e98fe723a6e9b2d67e7c95441f23bc98f550d4d824a47614981b39643e4781d (from https://pypi.org/simple/pele-platform/), version: 1.6.0b5
2021-09-03T17:49:44,585   Found link https://files.pythonhosted.org/packages/e1/28/b31c1b1b3daf0bc65f6c3d09cad23ec355868feb94787f0adc4407c60364/pele_platform-1.6.0b6.tar.gz#sha256=63327ad61bcbfa4e69c138e5ec38621194b929c5e271b21d01c359961fd8e805 (from https://pypi.org/simple/pele-platform/), version: 1.6.0b6
2021-09-03T17:49:44,586   Found link https://files.pythonhosted.org/packages/3c/b6/8ebb9f0d293a32db481b1bd6e620d5b04e73b2bf516bcedbd22033f16016/pele_platform-1.6.0b7.tar.gz#sha256=e5e3a57d5eb74bf3f664714017549f773f71f325da381666f8f872c38c12d06e (from https://pypi.org/simple/pele-platform/), version: 1.6.0b7
2021-09-03T17:49:44,587   Found link https://files.pythonhosted.org/packages/bf/83/ff52f07ec4bc23a134b0fcb5ea792d20ee925939a73bc0a2cc867e47378c/pele_platform-1.6.0rc1.tar.gz#sha256=34a396a464e091c199e16e4d7fdce545eb8e1acde49096d61f5c5f04a220b1d7 (from https://pypi.org/simple/pele-platform/), version: 1.6.0rc1
2021-09-03T17:49:44,588   Found link https://files.pythonhosted.org/packages/43/3a/60b79f3dae3de9b5568620f8d2bf4fc3d2a80a2bf055d2699f962b5cdd27/pele_platform-1.6.0rc2.tar.gz#sha256=1056394184b738486172547f015fa65ca7830cec5605bb99c86741908b3db07a (from https://pypi.org/simple/pele-platform/), version: 1.6.0rc2
2021-09-03T17:49:44,589   Found link https://files.pythonhosted.org/packages/27/be/a3c190f0a24fc9e18c3cd0ba2a328e597ee96e6722081e796f43afd3b706/pele_platform-1.6.0.tar.gz#sha256=648184346e6e4b63b1f13885f806143a875b6d5da59e53a5edb3b4e421bd1f90 (from https://pypi.org/simple/pele-platform/), version: 1.6.0
2021-09-03T17:49:44,589 Fetching project page and analyzing links: https://www.piwheels.org/simple/pele-platform/
2021-09-03T17:49:44,590 Getting page https://www.piwheels.org/simple/pele-platform/
2021-09-03T17:49:44,593 Found index url https://www.piwheels.org/simple
2021-09-03T17:49:44,828   Skipping link: No binaries permitted for pele-platform: https://www.piwheels.org/simple/pele-platform/pele_platform-1.0.0.1-cp34-cp34m-linux_armv6l.whl#sha256=cfa754261c485621955deb1b1b977ab76c3b11decc3791d2046182c538a53265 (from https://www.piwheels.org/simple/pele-platform/)
2021-09-03T17:49:44,829   Skipping link: No binaries permitted for pele-platform: https://www.piwheels.org/simple/pele-platform/pele_platform-1.0.0.1-cp34-cp34m-linux_armv7l.whl#sha256=cfa754261c485621955deb1b1b977ab76c3b11decc3791d2046182c538a53265 (from https://www.piwheels.org/simple/pele-platform/)
2021-09-03T17:49:44,830   Skipping link: No binaries permitted for pele-platform: https://www.piwheels.org/simple/pele-platform/pele_platform-1.0.0.2-cp34-cp34m-linux_armv6l.whl#sha256=8f9f46188cfb1375d1376a62f3cb8fc59775700ecd1d3268ea0decb9de1f2768 (from https://www.piwheels.org/simple/pele-platform/)
2021-09-03T17:49:44,831   Skipping link: No binaries permitted for pele-platform: https://www.piwheels.org/simple/pele-platform/pele_platform-1.0.0.2-cp34-cp34m-linux_armv7l.whl#sha256=8f9f46188cfb1375d1376a62f3cb8fc59775700ecd1d3268ea0decb9de1f2768 (from https://www.piwheels.org/simple/pele-platform/)
2021-09-03T17:49:44,831   Skipping link: No binaries permitted for pele-platform: https://www.piwheels.org/simple/pele-platform/pele_platform-1.0.0.2-cp35-cp35m-linux_armv6l.whl#sha256=c1794338b7c93baf55885b2f40257cdf706bdd2f6fc21d38cbf1f865d162899c (from https://www.piwheels.org/simple/pele-platform/)
2021-09-03T17:49:44,832   Skipping link: No binaries permitted for pele-platform: https://www.piwheels.org/simple/pele-platform/pele_platform-1.0.0.2-cp35-cp35m-linux_armv7l.whl#sha256=c1794338b7c93baf55885b2f40257cdf706bdd2f6fc21d38cbf1f865d162899c (from https://www.piwheels.org/simple/pele-platform/)
2021-09-03T17:49:44,833   Skipping link: No binaries permitted for pele-platform: https://www.piwheels.org/simple/pele-platform/pele_platform-1.0.0.2-cp37-cp37m-linux_armv6l.whl#sha256=52970c8a6e59fe092e264cde9de8c639a778852faaecb06fb6c8b6146b06136d (from https://www.piwheels.org/simple/pele-platform/)
2021-09-03T17:49:44,833   Skipping link: No binaries permitted for pele-platform: https://www.piwheels.org/simple/pele-platform/pele_platform-1.0.0.2-cp37-cp37m-linux_armv7l.whl#sha256=52970c8a6e59fe092e264cde9de8c639a778852faaecb06fb6c8b6146b06136d (from https://www.piwheels.org/simple/pele-platform/)
2021-09-03T17:49:44,834   Skipping link: No binaries permitted for pele-platform: https://www.piwheels.org/simple/pele-platform/pele_platform-1.0.0.2-cp39-cp39-linux_armv6l.whl#sha256=eb926ca03cf91a68265839e92d4b00873d99a215e9c99afc7807424ff391cbe5 (from https://www.piwheels.org/simple/pele-platform/)
2021-09-03T17:49:44,835   Skipping link: No binaries permitted for pele-platform: https://www.piwheels.org/simple/pele-platform/pele_platform-1.0.0.2-cp39-cp39-linux_armv7l.whl#sha256=eb926ca03cf91a68265839e92d4b00873d99a215e9c99afc7807424ff391cbe5 (from https://www.piwheels.org/simple/pele-platform/)
2021-09-03T17:49:44,835   Skipping link: No binaries permitted for pele-platform: https://www.piwheels.org/simple/pele-platform/pele_platform-1.0.0.3-cp34-cp34m-linux_armv6l.whl#sha256=e98b858f83fb7cb0f5c4f4c9dde11da1d2f97a22da162624fc253addfc1b1c56 (from https://www.piwheels.org/simple/pele-platform/)
2021-09-03T17:49:44,836   Skipping link: No binaries permitted for pele-platform: https://www.piwheels.org/simple/pele-platform/pele_platform-1.0.0.3-cp34-cp34m-linux_armv7l.whl#sha256=e98b858f83fb7cb0f5c4f4c9dde11da1d2f97a22da162624fc253addfc1b1c56 (from https://www.piwheels.org/simple/pele-platform/)
2021-09-03T17:49:44,837   Skipping link: No binaries permitted for pele-platform: https://www.piwheels.org/simple/pele-platform/pele_platform-1.0.0.3-cp35-cp35m-linux_armv6l.whl#sha256=39e33c6f24821296c6910712ef8253e663d36726ac6e084ba121a3b744d39a47 (from https://www.piwheels.org/simple/pele-platform/)
2021-09-03T17:49:44,837   Skipping link: No binaries permitted for pele-platform: https://www.piwheels.org/simple/pele-platform/pele_platform-1.0.0.3-cp35-cp35m-linux_armv7l.whl#sha256=39e33c6f24821296c6910712ef8253e663d36726ac6e084ba121a3b744d39a47 (from https://www.piwheels.org/simple/pele-platform/)
2021-09-03T17:49:44,838   Skipping link: No binaries permitted for pele-platform: https://www.piwheels.org/simple/pele-platform/pele_platform-1.0.0.3-cp37-cp37m-linux_armv6l.whl#sha256=343a8ef460b700f7e0e9661ea7252a162c6c9c4b4b2152d24075e1d08c7f588e (from https://www.piwheels.org/simple/pele-platform/)
2021-09-03T17:49:44,839   Skipping link: No binaries permitted for pele-platform: https://www.piwheels.org/simple/pele-platform/pele_platform-1.0.0.3-cp37-cp37m-linux_armv7l.whl#sha256=343a8ef460b700f7e0e9661ea7252a162c6c9c4b4b2152d24075e1d08c7f588e (from https://www.piwheels.org/simple/pele-platform/)
2021-09-03T17:49:44,839   Skipping link: No binaries permitted for pele-platform: https://www.piwheels.org/simple/pele-platform/pele_platform-1.0.0.3-cp39-cp39-linux_armv6l.whl#sha256=3690e174ecc0095e8ed79d7507ce4c0f013996a92962bc170ccec96812788f82 (from https://www.piwheels.org/simple/pele-platform/)
2021-09-03T17:49:44,840   Skipping link: No binaries permitted for pele-platform: https://www.piwheels.org/simple/pele-platform/pele_platform-1.0.0.3-cp39-cp39-linux_armv7l.whl#sha256=3690e174ecc0095e8ed79d7507ce4c0f013996a92962bc170ccec96812788f82 (from https://www.piwheels.org/simple/pele-platform/)
2021-09-03T17:49:44,840   Skipping link: No binaries permitted for pele-platform: https://www.piwheels.org/simple/pele-platform/pele_platform-1.1.0-cp34-cp34m-linux_armv6l.whl#sha256=6b7773052481af929dcfc3febcf09d20a46e1d2084eaebc566c246dff6c6402f (from https://www.piwheels.org/simple/pele-platform/)
2021-09-03T17:49:44,841   Skipping link: No binaries permitted for pele-platform: https://www.piwheels.org/simple/pele-platform/pele_platform-1.1.0-cp34-cp34m-linux_armv7l.whl#sha256=6b7773052481af929dcfc3febcf09d20a46e1d2084eaebc566c246dff6c6402f (from https://www.piwheels.org/simple/pele-platform/)
2021-09-03T17:49:44,842   Skipping link: No binaries permitted for pele-platform: https://www.piwheels.org/simple/pele-platform/pele_platform-1.1.0-cp35-cp35m-linux_armv6l.whl#sha256=5422629ba4988a3474b07aa6a3700267d19adaa0f82c61093cab9112c93bd31d (from https://www.piwheels.org/simple/pele-platform/)
2021-09-03T17:49:44,842   Skipping link: No binaries permitted for pele-platform: https://www.piwheels.org/simple/pele-platform/pele_platform-1.1.0-cp35-cp35m-linux_armv7l.whl#sha256=5422629ba4988a3474b07aa6a3700267d19adaa0f82c61093cab9112c93bd31d (from https://www.piwheels.org/simple/pele-platform/)
2021-09-03T17:49:44,843   Skipping link: No binaries permitted for pele-platform: https://www.piwheels.org/simple/pele-platform/pele_platform-1.1.0-cp37-cp37m-linux_armv6l.whl#sha256=f64dcc740377ca2dc0c89b34443c76b869be5977d38e447ed414f2393bfc52dc (from https://www.piwheels.org/simple/pele-platform/)
2021-09-03T17:49:44,844   Skipping link: No binaries permitted for pele-platform: https://www.piwheels.org/simple/pele-platform/pele_platform-1.1.0-cp37-cp37m-linux_armv7l.whl#sha256=f64dcc740377ca2dc0c89b34443c76b869be5977d38e447ed414f2393bfc52dc (from https://www.piwheels.org/simple/pele-platform/)
2021-09-03T17:49:44,844   Skipping link: No binaries permitted for pele-platform: https://www.piwheels.org/simple/pele-platform/pele_platform-1.1.0-cp39-cp39-linux_armv6l.whl#sha256=148e98b510ed810e6a520881ee1edb8f316c2ad632465a45a7339d122fed8caa (from https://www.piwheels.org/simple/pele-platform/)
2021-09-03T17:49:44,845   Skipping link: No binaries permitted for pele-platform: https://www.piwheels.org/simple/pele-platform/pele_platform-1.1.0-cp39-cp39-linux_armv7l.whl#sha256=148e98b510ed810e6a520881ee1edb8f316c2ad632465a45a7339d122fed8caa (from https://www.piwheels.org/simple/pele-platform/)
2021-09-03T17:49:44,846   Skipping link: No binaries permitted for pele-platform: https://www.piwheels.org/simple/pele-platform/pele_platform-1.2.0-py3-none-any.whl#sha256=67196e64d155c21e9e4a56fdb9e38d5616398ae761ef0a93ce090eeb61090b54 (from https://www.piwheels.org/simple/pele-platform/)
2021-09-03T17:49:44,846   Skipping link: No binaries permitted for pele-platform: https://www.piwheels.org/simple/pele-platform/pele_platform-1.2.1-py3-none-any.whl#sha256=5b2ecf5371bc1ad3f63cc83a505f2b8b9a2ad97ae8acc489c472e6d7b048eedc (from https://www.piwheels.org/simple/pele-platform/)
2021-09-03T17:49:44,847   Skipping link: No binaries permitted for pele-platform: https://www.piwheels.org/simple/pele-platform/pele_platform-1.2.2-py3-none-any.whl#sha256=0e5b906d6a253a746477d3258f4056666bd2c0dc018ce61549911535a8f70869 (from https://www.piwheels.org/simple/pele-platform/)
2021-09-03T17:49:44,848   Skipping link: No binaries permitted for pele-platform: https://www.piwheels.org/simple/pele-platform/pele_platform-1.2.3-py3-none-any.whl#sha256=7011b58018a73eb9b68717c27b2be53b806002a8ef6bc1dce96fca60556d5fea (from https://www.piwheels.org/simple/pele-platform/)
2021-09-03T17:49:44,848   Skipping link: No binaries permitted for pele-platform: https://www.piwheels.org/simple/pele-platform/pele_platform-1.3.0-py3-none-any.whl#sha256=90f15ddb37d1252e1b4d14b7693cc93eb154e8b32d688be1a0be9979027c226d (from https://www.piwheels.org/simple/pele-platform/)
2021-09-03T17:49:44,849   Skipping link: No binaries permitted for pele-platform: https://www.piwheels.org/simple/pele-platform/pele_platform-1.3.1-py3-none-any.whl#sha256=12870844d7c9a163afe074c7eefabc258a4d066ace893a0274f53f0c29b8fdcb (from https://www.piwheels.org/simple/pele-platform/)
2021-09-03T17:49:44,850   Skipping link: No binaries permitted for pele-platform: https://www.piwheels.org/simple/pele-platform/pele_platform-1.3.2-py3-none-any.whl#sha256=71ef46d8b3afde88aa24a2dbf708bb41b6953485ff83a0a208e9db2665fe10c4 (from https://www.piwheels.org/simple/pele-platform/)
2021-09-03T17:49:44,850   Skipping link: No binaries permitted for pele-platform: https://www.piwheels.org/simple/pele-platform/pele_platform-1.3.3-py3-none-any.whl#sha256=465699b14119e4d2a842e4ec79acf9f1aeaf77128aa8c04accb887cfff11a2b4 (from https://www.piwheels.org/simple/pele-platform/)
2021-09-03T17:49:44,851   Skipping link: No binaries permitted for pele-platform: https://www.piwheels.org/simple/pele-platform/pele_platform-1.3.4-py3-none-any.whl#sha256=80f7caf125762176eaeecf2bed6bb9b130bbbcd31f3214a8f5997be8870d2bc4 (from https://www.piwheels.org/simple/pele-platform/)
2021-09-03T17:49:44,851   Skipping link: No binaries permitted for pele-platform: https://www.piwheels.org/simple/pele-platform/pele_platform-1.4.0-py3-none-any.whl#sha256=388fdc753c3b6bc741bf732aa9a6b85a29cc271d2367aacc4eadc381e8bd0b7c (from https://www.piwheels.org/simple/pele-platform/)
2021-09-03T17:49:44,852   Skipping link: No binaries permitted for pele-platform: https://www.piwheels.org/simple/pele-platform/pele_platform-1.4.1-py3-none-any.whl#sha256=c7436c7db75936bac606cc8af8d05a492b48c5d5bcb582871d479aca7a270451 (from https://www.piwheels.org/simple/pele-platform/)
2021-09-03T17:49:44,853   Skipping link: No binaries permitted for pele-platform: https://www.piwheels.org/simple/pele-platform/pele_platform-1.4.2-py3-none-any.whl#sha256=78496fd0cf6b1bcc79201cb623eaae5f56156644e3da9b3d0d3a629649530f97 (from https://www.piwheels.org/simple/pele-platform/)
2021-09-03T17:49:44,853   Skipping link: No binaries permitted for pele-platform: https://www.piwheels.org/simple/pele-platform/pele_platform-1.4.3-py3-none-any.whl#sha256=fac366abbd0979e83e3dc8b93274d820070e6d91fc0373aef5e3a10ce4b13aff (from https://www.piwheels.org/simple/pele-platform/)
2021-09-03T17:49:44,854   Skipping link: No binaries permitted for pele-platform: https://www.piwheels.org/simple/pele-platform/pele_platform-1.4.4-py3-none-any.whl#sha256=c335d006901d5acc5b99a37758afcf124c3dbc76cf935ebcbecf2031883da70f (from https://www.piwheels.org/simple/pele-platform/)
2021-09-03T17:49:44,855   Skipping link: No binaries permitted for pele-platform: https://www.piwheels.org/simple/pele-platform/pele_platform-1.5.0-py3-none-any.whl#sha256=6e46958311c83d72e2c0f5f9b84d2453ab73469c2b58f0e559093aaf935dfde3 (from https://www.piwheels.org/simple/pele-platform/)
2021-09-03T17:49:44,855   Skipping link: No binaries permitted for pele-platform: https://www.piwheels.org/simple/pele-platform/pele_platform-1.5.1-py3-none-any.whl#sha256=1e2441185afe5cc09f11dd375ad35a722a8557cfa6d58dafa105b6cc82f8dace (from https://www.piwheels.org/simple/pele-platform/)
2021-09-03T17:49:44,856   Skipping link: No binaries permitted for pele-platform: https://www.piwheels.org/simple/pele-platform/pele_platform-1.6.0b1-py3-none-any.whl#sha256=d11c7ac7f6e793af3a339a75fe273ad0a8257511394b6e6949f7f8ac3638c822 (from https://www.piwheels.org/simple/pele-platform/)
2021-09-03T17:49:44,857   Skipping link: No binaries permitted for pele-platform: https://www.piwheels.org/simple/pele-platform/pele_platform-1.6.0b2-py3-none-any.whl#sha256=2c6c7cf955df0ed5f5eeaf9b2ab43ac47d2cfe7743f0defb67146a2806ecee74 (from https://www.piwheels.org/simple/pele-platform/)
2021-09-03T17:49:44,857   Skipping link: No binaries permitted for pele-platform: https://www.piwheels.org/simple/pele-platform/pele_platform-1.6.0b3-py3-none-any.whl#sha256=cbeabf00ab1a808d4b718129133ceb184ab58585f12d82d7465fe35cfe520d9b (from https://www.piwheels.org/simple/pele-platform/)
2021-09-03T17:49:44,858   Skipping link: No binaries permitted for pele-platform: https://www.piwheels.org/simple/pele-platform/pele_platform-1.6.0b4-py3-none-any.whl#sha256=aef8869582a5860da64b5bcf629ee3e030c70dc783ce7834b7da2e3f4e32d47d (from https://www.piwheels.org/simple/pele-platform/)
2021-09-03T17:49:44,859   Skipping link: No binaries permitted for pele-platform: https://www.piwheels.org/simple/pele-platform/pele_platform-1.6.0b5-py3-none-any.whl#sha256=0fe0b546464bc694c651c606052043a0f7c9acaf125ba4bd1fde9f349e88e959 (from https://www.piwheels.org/simple/pele-platform/)
2021-09-03T17:49:44,859   Skipping link: No binaries permitted for pele-platform: https://www.piwheels.org/simple/pele-platform/pele_platform-1.6.0b6-py3-none-any.whl#sha256=03c84f86922a46a247c25d34fccab1287e71efb2795ad00da3313162b628b5fc (from https://www.piwheels.org/simple/pele-platform/)
2021-09-03T17:49:44,860   Skipping link: No binaries permitted for pele-platform: https://www.piwheels.org/simple/pele-platform/pele_platform-1.6.0b7-py3-none-any.whl#sha256=2bd15289b4956ee24558f807ff69319d0585a640c676e82f48b26d4f7eeb77fc (from https://www.piwheels.org/simple/pele-platform/)
2021-09-03T17:49:44,860   Skipping link: No binaries permitted for pele-platform: https://www.piwheels.org/simple/pele-platform/pele_platform-1.6.0rc1-py3-none-any.whl#sha256=f17628f12454edfa542ff6dd8b1597e6dbe27366006582efa2b65537a009272d (from https://www.piwheels.org/simple/pele-platform/)
2021-09-03T17:49:44,861   Skipping link: No binaries permitted for pele-platform: https://www.piwheels.org/simple/pele-platform/pele_platform-1.6.0rc2-py3-none-any.whl#sha256=089f457c494767a9d5153745dd6e12ae4c9093451d5ef15fea11ba0e5b603bad (from https://www.piwheels.org/simple/pele-platform/)
2021-09-03T17:49:44,903 Given no hashes to check 1 links for project 'pele-platform': discarding no candidates
2021-09-03T17:49:44,936 Collecting pele-platform==1.6.0
2021-09-03T17:49:44,939   Created temporary directory: /tmp/pip-unpack-y0ikft5f
2021-09-03T17:49:45,450   Downloading pele_platform-1.6.0.tar.gz (11.1 MB)
2021-09-03T17:49:57,689   Added pele-platform==1.6.0 from https://files.pythonhosted.org/packages/27/be/a3c190f0a24fc9e18c3cd0ba2a328e597ee96e6722081e796f43afd3b706/pele_platform-1.6.0.tar.gz#sha256=648184346e6e4b63b1f13885f806143a875b6d5da59e53a5edb3b4e421bd1f90 to build tracker '/tmp/pip-req-tracker-tcz7fjug'
2021-09-03T17:49:57,692     Running setup.py (path:/tmp/pip-wheel-1y8iq4hp/pele-platform_ce6ac9233b4648778c04797dbb9c973c/setup.py) egg_info for package pele-platform
2021-09-03T17:49:57,694     Created temporary directory: /tmp/pip-pip-egg-info-raeneb4f
2021-09-03T17:49:57,694     Running command python setup.py egg_info
2021-09-03T17:50:00,198     running egg_info
2021-09-03T17:50:00,204     creating /tmp/pip-pip-egg-info-raeneb4f/pele_platform.egg-info
2021-09-03T17:50:00,207     writing requirements to /tmp/pip-pip-egg-info-raeneb4f/pele_platform.egg-info/requires.txt
2021-09-03T17:50:00,210     writing /tmp/pip-pip-egg-info-raeneb4f/pele_platform.egg-info/PKG-INFO
2021-09-03T17:50:00,214     writing dependency_links to /tmp/pip-pip-egg-info-raeneb4f/pele_platform.egg-info/dependency_links.txt
2021-09-03T17:50:00,218     writing top-level names to /tmp/pip-pip-egg-info-raeneb4f/pele_platform.egg-info/top_level.txt
2021-09-03T17:50:00,222     writing manifest file '/tmp/pip-pip-egg-info-raeneb4f/pele_platform.egg-info/SOURCES.txt'
2021-09-03T17:50:00,275     reading manifest file '/tmp/pip-pip-egg-info-raeneb4f/pele_platform.egg-info/SOURCES.txt'
2021-09-03T17:50:00,278     reading manifest template 'MANIFEST.in'
2021-09-03T17:50:00,282     warning: no files found matching 'pele_platform/Utilities/PlopRotTemp/param/*'
2021-09-03T17:50:00,282     warning: no files found matching 'pele_platform/AdaptivePELE/atomset/*'
2021-09-03T17:50:00,283     warning: no files found matching 'pele_platform/AdaptivePELE/freeEnergies/*'
2021-09-03T17:50:00,284     warning: no files found matching '*' under directory 'pele_platform/Utilities/PPP/Data/'
2021-09-03T17:50:00,767     warning: no files found matching '*' under directory 'tests/data'
2021-09-03T17:50:00,814     writing manifest file '/tmp/pip-pip-egg-info-raeneb4f/pele_platform.egg-info/SOURCES.txt'
2021-09-03T17:50:00,953   Source in /tmp/pip-wheel-1y8iq4hp/pele-platform_ce6ac9233b4648778c04797dbb9c973c has version 1.6.0, which satisfies requirement pele-platform==1.6.0 from https://files.pythonhosted.org/packages/27/be/a3c190f0a24fc9e18c3cd0ba2a328e597ee96e6722081e796f43afd3b706/pele_platform-1.6.0.tar.gz#sha256=648184346e6e4b63b1f13885f806143a875b6d5da59e53a5edb3b4e421bd1f90
2021-09-03T17:50:00,955   Removed pele-platform==1.6.0 from https://files.pythonhosted.org/packages/27/be/a3c190f0a24fc9e18c3cd0ba2a328e597ee96e6722081e796f43afd3b706/pele_platform-1.6.0.tar.gz#sha256=648184346e6e4b63b1f13885f806143a875b6d5da59e53a5edb3b4e421bd1f90 from build tracker '/tmp/pip-req-tracker-tcz7fjug'
2021-09-03T17:50:00,963 Created temporary directory: /tmp/pip-unpack-fk3tg4ft
2021-09-03T17:50:00,964 Building wheels for collected packages: pele-platform
2021-09-03T17:50:00,973   Created temporary directory: /tmp/pip-wheel-8s5q57d1
2021-09-03T17:50:00,974   Building wheel for pele-platform (setup.py): started
2021-09-03T17:50:00,975   Destination directory: /tmp/pip-wheel-8s5q57d1
2021-09-03T17:50:00,976   Running command /usr/bin/python3 -u -c 'import sys, setuptools, tokenize; sys.argv[0] = '"'"'/tmp/pip-wheel-1y8iq4hp/pele-platform_ce6ac9233b4648778c04797dbb9c973c/setup.py'"'"'; __file__='"'"'/tmp/pip-wheel-1y8iq4hp/pele-platform_ce6ac9233b4648778c04797dbb9c973c/setup.py'"'"';f=getattr(tokenize, '"'"'open'"'"', open)(__file__);code=f.read().replace('"'"'\r\n'"'"', '"'"'\n'"'"');f.close();exec(compile(code, __file__, '"'"'exec'"'"'))' bdist_wheel -d /tmp/pip-wheel-8s5q57d1
2021-09-03T17:50:03,449   running bdist_wheel
2021-09-03T17:50:03,459   running build
2021-09-03T17:50:03,459   running build_py
2021-09-03T17:50:03,471   creating build
2021-09-03T17:50:03,472   creating build/lib
2021-09-03T17:50:03,473   creating build/lib/pele_platform
2021-09-03T17:50:03,476   copying pele_platform/_version.py -> build/lib/pele_platform
2021-09-03T17:50:03,480   copying pele_platform/main.py -> build/lib/pele_platform
2021-09-03T17:50:03,484   copying pele_platform/plotter.py -> build/lib/pele_platform
2021-09-03T17:50:03,493   copying pele_platform/__init__.py -> build/lib/pele_platform
2021-09-03T17:50:03,498   creating build/lib/pele_platform/features
2021-09-03T17:50:03,500   copying pele_platform/features/adaptive.py -> build/lib/pele_platform/features
2021-09-03T17:50:03,505   copying pele_platform/features/__init__.py -> build/lib/pele_platform/features
2021-09-03T17:50:03,509   copying pele_platform/features/frag.py -> build/lib/pele_platform/features
2021-09-03T17:50:03,516   creating build/lib/pele_platform/out_in
2021-09-03T17:50:03,519   copying pele_platform/out_in/main.py -> build/lib/pele_platform/out_in
2021-09-03T17:50:03,524   copying pele_platform/out_in/__init__.py -> build/lib/pele_platform/out_in
2021-09-03T17:50:03,529   creating build/lib/pele_platform/Errors
2021-09-03T17:50:03,530   copying pele_platform/Errors/custom_errors.py -> build/lib/pele_platform/Errors
2021-09-03T17:50:03,535   copying pele_platform/Errors/__init__.py -> build/lib/pele_platform/Errors
2021-09-03T17:50:03,539   creating build/lib/pele_platform/analysis
2021-09-03T17:50:03,541   copying pele_platform/analysis/data.py -> build/lib/pele_platform/analysis
2021-09-03T17:50:03,551   copying pele_platform/analysis/plot.py -> build/lib/pele_platform/analysis
2021-09-03T17:50:03,558   copying pele_platform/analysis/__init__.py -> build/lib/pele_platform/analysis
2021-09-03T17:50:03,563   copying pele_platform/analysis/pdf_report.py -> build/lib/pele_platform/analysis
2021-09-03T17:50:03,569   copying pele_platform/analysis/analysis.py -> build/lib/pele_platform/analysis
2021-09-03T17:50:03,582   copying pele_platform/analysis/clustering.py -> build/lib/pele_platform/analysis
2021-09-03T17:50:03,589   copying pele_platform/analysis/interactive_plot.py -> build/lib/pele_platform/analysis
2021-09-03T17:50:03,599   creating build/lib/pele_platform/enzyme_engineering
2021-09-03T17:50:03,601   copying pele_platform/enzyme_engineering/saturated_mutagenesis.py -> build/lib/pele_platform/enzyme_engineering
2021-09-03T17:50:03,608   copying pele_platform/enzyme_engineering/__init__.py -> build/lib/pele_platform/enzyme_engineering
2021-09-03T17:50:03,612   creating build/lib/pele_platform/Utilities
2021-09-03T17:50:03,613   copying pele_platform/Utilities/__init__.py -> build/lib/pele_platform/Utilities
2021-09-03T17:50:03,618   creating build/lib/pele_platform/constants
2021-09-03T17:50:03,620   copying pele_platform/constants/constants.py -> build/lib/pele_platform/constants
2021-09-03T17:50:03,625   copying pele_platform/constants/__init__.py -> build/lib/pele_platform/constants
2021-09-03T17:50:03,630   copying pele_platform/constants/pele_params.py -> build/lib/pele_platform/constants
2021-09-03T17:50:03,639   creating build/lib/pele_platform/Checker
2021-09-03T17:50:03,641   copying pele_platform/Checker/valid_flags.py -> build/lib/pele_platform/Checker
2021-09-03T17:50:03,648   copying pele_platform/Checker/main.py -> build/lib/pele_platform/Checker
2021-09-03T17:50:03,652   copying pele_platform/Checker/pdb_checker.py -> build/lib/pele_platform/Checker
2021-09-03T17:50:03,656   copying pele_platform/Checker/__init__.py -> build/lib/pele_platform/Checker
2021-09-03T17:50:03,659   copying pele_platform/Checker/python_version.py -> build/lib/pele_platform/Checker
2021-09-03T17:50:03,663   copying pele_platform/Checker/environment_variables.py -> build/lib/pele_platform/Checker
2021-09-03T17:50:03,666   copying pele_platform/Checker/executable.py -> build/lib/pele_platform/Checker
2021-09-03T17:50:03,675   creating build/lib/pele_platform/Frag
2021-09-03T17:50:03,677   copying pele_platform/Frag/atoms.py -> build/lib/pele_platform/Frag
2021-09-03T17:50:03,683   copying pele_platform/Frag/checker.py -> build/lib/pele_platform/Frag
2021-09-03T17:50:03,689   copying pele_platform/Frag/simulation.py -> build/lib/pele_platform/Frag
2021-09-03T17:50:03,695   copying pele_platform/Frag/fragments.py -> build/lib/pele_platform/Frag
2021-09-03T17:50:03,699   copying pele_platform/Frag/helpers.py -> build/lib/pele_platform/Frag
2021-09-03T17:50:03,704   copying pele_platform/Frag/__init__.py -> build/lib/pele_platform/Frag
2021-09-03T17:50:03,708   copying pele_platform/Frag/analysis.py -> build/lib/pele_platform/Frag
2021-09-03T17:50:03,714   copying pele_platform/Frag/generative_model.py -> build/lib/pele_platform/Frag
2021-09-03T17:50:03,720   copying pele_platform/Frag/libraries.py -> build/lib/pele_platform/Frag
2021-09-03T17:50:03,728   creating build/lib/pele_platform/RNA
2021-09-03T17:50:03,730   copying pele_platform/RNA/__init__.py -> build/lib/pele_platform/RNA
2021-09-03T17:50:03,733   copying pele_platform/RNA/prep.py -> build/lib/pele_platform/RNA
2021-09-03T17:50:03,738   creating build/lib/pele_platform/covalent_docking
2021-09-03T17:50:03,740   copying pele_platform/covalent_docking/main.py -> build/lib/pele_platform/covalent_docking
2021-09-03T17:50:03,746   copying pele_platform/covalent_docking/__init__.py -> build/lib/pele_platform/covalent_docking
2021-09-03T17:50:03,751   creating build/lib/pele_platform/gpcr
2021-09-03T17:50:03,753   copying pele_platform/gpcr/main.py -> build/lib/pele_platform/gpcr
2021-09-03T17:50:03,759   copying pele_platform/gpcr/__init__.py -> build/lib/pele_platform/gpcr
2021-09-03T17:50:03,767   creating build/lib/pele_platform/Adaptive
2021-09-03T17:50:03,771   copying pele_platform/Adaptive/parametrizer.py -> build/lib/pele_platform/Adaptive
2021-09-03T17:50:03,780   copying pele_platform/Adaptive/interaction_restrictions.py -> build/lib/pele_platform/Adaptive
2021-09-03T17:50:03,785   copying pele_platform/Adaptive/simulation.py -> build/lib/pele_platform/Adaptive
2021-09-03T17:50:03,792   copying pele_platform/Adaptive/plop_solvent.py -> build/lib/pele_platform/Adaptive
2021-09-03T17:50:03,797   copying pele_platform/Adaptive/plop_ligand_parametrization.py -> build/lib/pele_platform/Adaptive
2021-09-03T17:50:03,801   copying pele_platform/Adaptive/__init__.py -> build/lib/pele_platform/Adaptive
2021-09-03T17:50:03,806   copying pele_platform/Adaptive/metrics.py -> build/lib/pele_platform/Adaptive
2021-09-03T17:50:03,810   copying pele_platform/Adaptive/box.py -> build/lib/pele_platform/Adaptive
2021-09-03T17:50:03,815   copying pele_platform/Adaptive/pca.py -> build/lib/pele_platform/Adaptive
2021-09-03T17:50:03,821   creating build/lib/pele_platform/site_finder
2021-09-03T17:50:03,824   copying pele_platform/site_finder/main.py -> build/lib/pele_platform/site_finder
2021-09-03T17:50:03,830   copying pele_platform/site_finder/__init__.py -> build/lib/pele_platform/site_finder
2021-09-03T17:50:03,835   creating build/lib/pele_platform/PPI
2021-09-03T17:50:03,838   copying pele_platform/PPI/cluster.py -> build/lib/pele_platform/PPI
2021-09-03T17:50:03,844   copying pele_platform/PPI/simulation_launcher.py -> build/lib/pele_platform/PPI
2021-09-03T17:50:03,848   copying pele_platform/PPI/main.py -> build/lib/pele_platform/PPI
2021-09-03T17:50:03,854   copying pele_platform/PPI/__init__.py -> build/lib/pele_platform/PPI
2021-09-03T17:50:03,858   copying pele_platform/PPI/preparation.py -> build/lib/pele_platform/PPI
2021-09-03T17:50:03,869   creating build/lib/pele_platform/Utilities/Helpers
2021-09-03T17:50:03,872   copying pele_platform/Utilities/Helpers/bestStructs.py -> build/lib/pele_platform/Utilities/Helpers
2021-09-03T17:50:03,878   copying pele_platform/Utilities/Helpers/map_atoms.py -> build/lib/pele_platform/Utilities/Helpers
2021-09-03T17:50:03,884   copying pele_platform/Utilities/Helpers/launcher.py -> build/lib/pele_platform/Utilities/Helpers
2021-09-03T17:50:03,889   copying pele_platform/Utilities/Helpers/solventOBCParamsGenerator.py -> build/lib/pele_platform/Utilities/Helpers
2021-09-03T17:50:03,895   copying pele_platform/Utilities/Helpers/protein_wizard.py -> build/lib/pele_platform/Utilities/Helpers
2021-09-03T17:50:03,900   copying pele_platform/Utilities/Helpers/yaml_parser.py -> build/lib/pele_platform/Utilities/Helpers
2021-09-03T17:50:03,907   copying pele_platform/Utilities/Helpers/interaction_constraints.py -> build/lib/pele_platform/Utilities/Helpers
2021-09-03T17:50:03,913   copying pele_platform/Utilities/Helpers/plop_launcher.py -> build/lib/pele_platform/Utilities/Helpers
2021-09-03T17:50:03,920   copying pele_platform/Utilities/Helpers/center_of_mass.py -> build/lib/pele_platform/Utilities/Helpers
2021-09-03T17:50:03,927   copying pele_platform/Utilities/Helpers/randomize.py -> build/lib/pele_platform/Utilities/Helpers
2021-09-03T17:50:03,935   copying pele_platform/Utilities/Helpers/simulation.py -> build/lib/pele_platform/Utilities/Helpers
2021-09-03T17:50:03,941   copying pele_platform/Utilities/Helpers/helpers.py -> build/lib/pele_platform/Utilities/Helpers
2021-09-03T17:50:03,948   copying pele_platform/Utilities/Helpers/__init__.py -> build/lib/pele_platform/Utilities/Helpers
2021-09-03T17:50:03,953   copying pele_platform/Utilities/Helpers/water.py -> build/lib/pele_platform/Utilities/Helpers
2021-09-03T17:50:03,960   copying pele_platform/Utilities/Helpers/system_prep.py -> build/lib/pele_platform/Utilities/Helpers
2021-09-03T17:50:03,966   copying pele_platform/Utilities/Helpers/missing_residues.py -> build/lib/pele_platform/Utilities/Helpers
2021-09-03T17:50:03,971   copying pele_platform/Utilities/Helpers/calculatePCA4PELE.py -> build/lib/pele_platform/Utilities/Helpers
2021-09-03T17:50:03,978   copying pele_platform/Utilities/Helpers/ligand_conformations.py -> build/lib/pele_platform/Utilities/Helpers
2021-09-03T17:50:03,984   copying pele_platform/Utilities/Helpers/conda_deployment.py -> build/lib/pele_platform/Utilities/Helpers
2021-09-03T17:50:03,988   copying pele_platform/Utilities/Helpers/template_builder.py -> build/lib/pele_platform/Utilities/Helpers
2021-09-03T17:50:03,994   creating build/lib/pele_platform/Utilities/Parameters
2021-09-03T17:50:03,997   copying pele_platform/Utilities/Parameters/__init__.py -> build/lib/pele_platform/Utilities/Parameters
2021-09-03T17:50:04,002   copying pele_platform/Utilities/Parameters/parameters.py -> build/lib/pele_platform/Utilities/Parameters
2021-09-03T17:50:04,009   creating build/lib/pele_platform/Utilities/Helpers/constraints
2021-09-03T17:50:04,012   copying pele_platform/Utilities/Helpers/constraints/alpha_constraints.py -> build/lib/pele_platform/Utilities/Helpers/constraints
2021-09-03T17:50:04,018   copying pele_platform/Utilities/Helpers/constraints/__init__.py -> build/lib/pele_platform/Utilities/Helpers/constraints
2021-09-03T17:50:04,022   copying pele_platform/Utilities/Helpers/constraints/smiles_constraints.py -> build/lib/pele_platform/Utilities/Helpers/constraints
2021-09-03T17:50:04,029   creating build/lib/pele_platform/Utilities/Helpers/Metals
2021-09-03T17:50:04,032   copying pele_platform/Utilities/Helpers/Metals/metal_constraints.py -> build/lib/pele_platform/Utilities/Helpers/Metals
2021-09-03T17:50:04,038   copying pele_platform/Utilities/Helpers/Metals/__init__.py -> build/lib/pele_platform/Utilities/Helpers/Metals
2021-09-03T17:50:04,043   copying pele_platform/Utilities/Helpers/Metals/metal_polarisation.py -> build/lib/pele_platform/Utilities/Helpers/Metals
2021-09-03T17:50:04,049   creating build/lib/pele_platform/Utilities/Parameters/SimulationFolders
2021-09-03T17:50:04,051   copying pele_platform/Utilities/Parameters/SimulationFolders/__init__.py -> build/lib/pele_platform/Utilities/Parameters/SimulationFolders
2021-09-03T17:50:04,056   copying pele_platform/Utilities/Parameters/SimulationFolders/simulation_folders.py -> build/lib/pele_platform/Utilities/Parameters/SimulationFolders
2021-09-03T17:50:04,062   creating build/lib/pele_platform/Utilities/Parameters/SimulationParams
2021-09-03T17:50:04,065   copying pele_platform/Utilities/Parameters/SimulationParams/simulation_params.py -> build/lib/pele_platform/Utilities/Parameters/SimulationParams
2021-09-03T17:50:04,073   copying pele_platform/Utilities/Parameters/SimulationParams/__init__.py -> build/lib/pele_platform/Utilities/Parameters/SimulationParams
2021-09-03T17:50:04,078   creating build/lib/pele_platform/Utilities/Parameters/SimulationParams/GlideParams
2021-09-03T17:50:04,080   copying pele_platform/Utilities/Parameters/SimulationParams/GlideParams/glide_params.py -> build/lib/pele_platform/Utilities/Parameters/SimulationParams/GlideParams
2021-09-03T17:50:04,084   copying pele_platform/Utilities/Parameters/SimulationParams/GlideParams/__init__.py -> build/lib/pele_platform/Utilities/Parameters/SimulationParams/GlideParams
2021-09-03T17:50:04,089   creating build/lib/pele_platform/Utilities/Parameters/SimulationParams/MSMParams
2021-09-03T17:50:04,091   copying pele_platform/Utilities/Parameters/SimulationParams/MSMParams/msm_params.py -> build/lib/pele_platform/Utilities/Parameters/SimulationParams/MSMParams
2021-09-03T17:50:04,095   copying pele_platform/Utilities/Parameters/SimulationParams/MSMParams/__init__.py -> build/lib/pele_platform/Utilities/Parameters/SimulationParams/MSMParams
2021-09-03T17:50:04,099   creating build/lib/pele_platform/Utilities/Parameters/SimulationParams/PCA
2021-09-03T17:50:04,101   copying pele_platform/Utilities/Parameters/SimulationParams/PCA/__init__.py -> build/lib/pele_platform/Utilities/Parameters/SimulationParams/PCA
2021-09-03T17:50:04,105   copying pele_platform/Utilities/Parameters/SimulationParams/PCA/pca.py -> build/lib/pele_platform/Utilities/Parameters/SimulationParams/PCA
2021-09-03T17:50:04,110   creating build/lib/pele_platform/Utilities/Parameters/SimulationParams/InOutParams
2021-09-03T17:50:04,112   copying pele_platform/Utilities/Parameters/SimulationParams/InOutParams/__init__.py -> build/lib/pele_platform/Utilities/Parameters/SimulationParams/InOutParams
2021-09-03T17:50:04,116   copying pele_platform/Utilities/Parameters/SimulationParams/InOutParams/inout_params.py -> build/lib/pele_platform/Utilities/Parameters/SimulationParams/InOutParams
2021-09-03T17:50:04,120   creating build/lib/pele_platform/Utilities/Parameters/SimulationParams/BiasParams
2021-09-03T17:50:04,122   copying pele_platform/Utilities/Parameters/SimulationParams/BiasParams/__init__.py -> build/lib/pele_platform/Utilities/Parameters/SimulationParams/BiasParams
2021-09-03T17:50:04,126   copying pele_platform/Utilities/Parameters/SimulationParams/BiasParams/bias_params.py -> build/lib/pele_platform/Utilities/Parameters/SimulationParams/BiasParams
2021-09-03T17:50:04,131   creating build/lib/pele_platform/Utilities/Parameters/SimulationParams/site_finder
2021-09-03T17:50:04,133   copying pele_platform/Utilities/Parameters/SimulationParams/site_finder/site_finder.py -> build/lib/pele_platform/Utilities/Parameters/SimulationParams/site_finder
2021-09-03T17:50:04,137   copying pele_platform/Utilities/Parameters/SimulationParams/site_finder/__init__.py -> build/lib/pele_platform/Utilities/Parameters/SimulationParams/site_finder
2021-09-03T17:50:04,141   creating build/lib/pele_platform/Utilities/Parameters/SimulationParams/PPI
2021-09-03T17:50:04,143   copying pele_platform/Utilities/Parameters/SimulationParams/PPI/__init__.py -> build/lib/pele_platform/Utilities/Parameters/SimulationParams/PPI
2021-09-03T17:50:04,147   copying pele_platform/Utilities/Parameters/SimulationParams/PPI/ppi.py -> build/lib/pele_platform/Utilities/Parameters/SimulationParams/PPI
2021-09-03T17:50:04,152   creating build/lib/pele_platform/Frag/parameters
2021-09-03T17:50:04,155   copying pele_platform/Frag/parameters/simulation.py -> build/lib/pele_platform/Frag/parameters
2021-09-03T17:50:04,160   copying pele_platform/Frag/parameters/optional.py -> build/lib/pele_platform/Frag/parameters
2021-09-03T17:50:04,164   copying pele_platform/Frag/parameters/__init__.py -> build/lib/pele_platform/Frag/parameters
2021-09-03T17:50:04,168   copying pele_platform/Frag/parameters/water.py -> build/lib/pele_platform/Frag/parameters
2021-09-03T17:50:04,173   copying pele_platform/Frag/parameters/metrics.py -> build/lib/pele_platform/Frag/parameters
2021-09-03T17:50:04,183   copying pele_platform/Frag/parameters/files.py -> build/lib/pele_platform/Frag/parameters
2021-09-03T17:50:04,190   running egg_info
2021-09-03T17:50:04,213   writing top-level names to pele_platform.egg-info/top_level.txt
2021-09-03T17:50:04,216   writing requirements to pele_platform.egg-info/requires.txt
2021-09-03T17:50:04,219   writing pele_platform.egg-info/PKG-INFO
2021-09-03T17:50:04,223   writing dependency_links to pele_platform.egg-info/dependency_links.txt
2021-09-03T17:50:04,267   reading manifest file 'pele_platform.egg-info/SOURCES.txt'
2021-09-03T17:50:04,294   reading manifest template 'MANIFEST.in'
2021-09-03T17:50:04,296   warning: no files found matching 'pele_platform/Utilities/PlopRotTemp/param/*'
2021-09-03T17:50:04,297   warning: no files found matching 'pele_platform/AdaptivePELE/atomset/*'
2021-09-03T17:50:04,298   warning: no files found matching 'pele_platform/AdaptivePELE/freeEnergies/*'
2021-09-03T17:50:04,298   warning: no files found matching '*' under directory 'pele_platform/Utilities/PPP/Data/'
2021-09-03T17:50:04,711   warning: no files found matching '*' under directory 'tests/data'
2021-09-03T17:50:04,783   writing manifest file 'pele_platform.egg-info/SOURCES.txt'
2021-09-03T17:50:04,892   creating build/lib/pele_platform/Examples
2021-09-03T17:50:04,894   copying pele_platform/Examples/test.sl -> build/lib/pele_platform/Examples
2021-09-03T17:50:04,899   creating build/lib/pele_platform/Examples/Adaptive
2021-09-03T17:50:04,901   copying pele_platform/Examples/Adaptive/STR.rot.assign -> build/lib/pele_platform/Examples/Adaptive
2021-09-03T17:50:04,906   copying pele_platform/Examples/Adaptive/adaptive.conf -> build/lib/pele_platform/Examples/Adaptive
2021-09-03T17:50:04,910   copying pele_platform/Examples/Adaptive/pele_file_4Adaptive.conf -> build/lib/pele_platform/Examples/Adaptive
2021-09-03T17:50:04,917   copying pele_platform/Examples/Adaptive/strz -> build/lib/pele_platform/Examples/Adaptive
2021-09-03T17:50:04,928   copying pele_platform/Examples/Adaptive/test.sl -> build/lib/pele_platform/Examples/Adaptive
2021-09-03T17:50:04,935   creating build/lib/pele_platform/Examples/Msm
2021-09-03T17:50:04,937   copying pele_platform/Examples/Msm/AS4_INIT.mae -> build/lib/pele_platform/Examples/Msm
2021-09-03T17:50:04,944   copying pele_platform/Examples/Msm/PR_1A28_protein.pdb -> build/lib/pele_platform/Examples/Msm
2021-09-03T17:50:04,981   copying pele_platform/Examples/Msm/PR_1A28_xray_-_minimized.pdb -> build/lib/pele_platform/Examples/Msm
2021-09-03T17:50:05,021   copying pele_platform/Examples/Msm/PR_1A28_xray_-_minimized_processed.pdb -> build/lib/pele_platform/Examples/Msm
2021-09-03T17:50:05,060   copying pele_platform/Examples/Msm/PR_AS4.pdb -> build/lib/pele_platform/Examples/Msm
2021-09-03T17:50:05,099   copying pele_platform/Examples/Msm/input.yaml -> build/lib/pele_platform/Examples/Msm
2021-09-03T17:50:05,105   creating build/lib/pele_platform/Examples/PPI
2021-09-03T17:50:05,107   copying pele_platform/Examples/PPI/1f47_ligand.pdb -> build/lib/pele_platform/Examples/PPI
2021-09-03T17:50:05,115   copying pele_platform/Examples/PPI/1f47_prep.pdb -> build/lib/pele_platform/Examples/PPI
2021-09-03T17:50:05,139   copying pele_platform/Examples/PPI/1tnf_ligand.pdb -> build/lib/pele_platform/Examples/PPI
2021-09-03T17:50:05,145   copying pele_platform/Examples/PPI/1tnf_prep.pdb -> build/lib/pele_platform/Examples/PPI
2021-09-03T17:50:05,204   copying pele_platform/Examples/PPI/input.yaml -> build/lib/pele_platform/Examples/PPI
2021-09-03T17:50:05,208   copying pele_platform/Examples/PPI/input_folder.yaml -> build/lib/pele_platform/Examples/PPI
2021-09-03T17:50:05,213   copying pele_platform/Examples/PPI/input_skipref.yaml -> build/lib/pele_platform/Examples/PPI
2021-09-03T17:50:05,217   creating build/lib/pele_platform/Examples/RNA
2021-09-03T17:50:05,219   copying pele_platform/Examples/RNA/2l94.yaml -> build/lib/pele_platform/Examples/RNA
2021-09-03T17:50:05,224   copying pele_platform/Examples/RNA/5C45_prep.pdb -> build/lib/pele_platform/Examples/RNA
2021-09-03T17:50:05,266   copying pele_platform/Examples/RNA/5C45_prep_proc.pdb -> build/lib/pele_platform/Examples/RNA
2021-09-03T17:50:05,309   copying pele_platform/Examples/RNA/input.yaml -> build/lib/pele_platform/Examples/RNA
2021-09-03T17:50:05,316   copying pele_platform/Examples/RNA/input_induced.yaml -> build/lib/pele_platform/Examples/RNA
2021-09-03T17:50:05,322   creating build/lib/pele_platform/Examples/analysis
2021-09-03T17:50:05,324   copying pele_platform/Examples/analysis/input.yaml -> build/lib/pele_platform/Examples/analysis
2021-09-03T17:50:05,329   copying pele_platform/Examples/analysis/input_flags.yaml -> build/lib/pele_platform/Examples/analysis
2021-09-03T17:50:05,333   copying pele_platform/Examples/analysis/input_flags0.yaml -> build/lib/pele_platform/Examples/analysis
2021-09-03T17:50:05,338   copying pele_platform/Examples/analysis/input_xtc.yaml -> build/lib/pele_platform/Examples/analysis
2021-09-03T17:50:05,342   creating build/lib/pele_platform/Examples/analysis/data
2021-09-03T17:50:05,345   copying pele_platform/Examples/analysis/data/MG.rot.assign -> build/lib/pele_platform/Examples/analysis/data
2021-09-03T17:50:05,351   copying pele_platform/Examples/analysis/data/STR.rot.assign -> build/lib/pele_platform/Examples/analysis/data
2021-09-03T17:50:05,356   copying pele_platform/Examples/analysis/data/adaptive.conf -> build/lib/pele_platform/Examples/analysis/data
2021-09-03T17:50:05,363   copying pele_platform/Examples/analysis/data/input.yaml -> build/lib/pele_platform/Examples/analysis/data
2021-09-03T17:50:05,367   copying pele_platform/Examples/analysis/data/input_flags.yaml -> build/lib/pele_platform/Examples/analysis/data
2021-09-03T17:50:05,372   copying pele_platform/Examples/analysis/data/input_flags0.yaml -> build/lib/pele_platform/Examples/analysis/data
2021-09-03T17:50:05,376   copying pele_platform/Examples/analysis/data/input_mae.yaml -> build/lib/pele_platform/Examples/analysis/data
2021-09-03T17:50:05,381   copying pele_platform/Examples/analysis/data/mgz -> build/lib/pele_platform/Examples/analysis/data
2021-09-03T17:50:05,385   copying pele_platform/Examples/analysis/data/pele.conf -> build/lib/pele_platform/Examples/analysis/data
2021-09-03T17:50:05,392   copying pele_platform/Examples/analysis/data/strz -> build/lib/pele_platform/Examples/analysis/data
2021-09-03T17:50:05,398   creating build/lib/pele_platform/Examples/analysis/data/empty_reports_output
2021-09-03T17:50:05,399   creating build/lib/pele_platform/Examples/analysis/data/empty_reports_output/0
2021-09-03T17:50:05,402   copying pele_platform/Examples/analysis/data/empty_reports_output/0/report_1 -> build/lib/pele_platform/Examples/analysis/data/empty_reports_output/0
2021-09-03T17:50:05,408   copying pele_platform/Examples/analysis/data/empty_reports_output/0/report_2 -> build/lib/pele_platform/Examples/analysis/data/empty_reports_output/0
2021-09-03T17:50:05,412   copying pele_platform/Examples/analysis/data/empty_reports_output/0/topologyMapping.txt -> build/lib/pele_platform/Examples/analysis/data/empty_reports_output/0
2021-09-03T17:50:05,417   copying pele_platform/Examples/analysis/data/empty_reports_output/0/trajectory_1.pdb -> build/lib/pele_platform/Examples/analysis/data/empty_reports_output/0
2021-09-03T17:50:05,459   copying pele_platform/Examples/analysis/data/empty_reports_output/0/trajectory_2.pdb -> build/lib/pele_platform/Examples/analysis/data/empty_reports_output/0
2021-09-03T17:50:05,571   creating build/lib/pele_platform/Examples/analysis/data/inputs
2021-09-03T17:50:05,573   copying pele_platform/Examples/analysis/data/inputs/input1.pdb -> build/lib/pele_platform/Examples/analysis/data/inputs
2021-09-03T17:50:05,612   copying pele_platform/Examples/analysis/data/inputs/input2.pdb -> build/lib/pele_platform/Examples/analysis/data/inputs
2021-09-03T17:50:05,653   copying pele_platform/Examples/analysis/data/inputs/input3.pdb -> build/lib/pele_platform/Examples/analysis/data/inputs
2021-09-03T17:50:05,694   creating build/lib/pele_platform/Examples/analysis/data/output
2021-09-03T17:50:05,697   copying pele_platform/Examples/analysis/data/output/originalControlFile.conf -> build/lib/pele_platform/Examples/analysis/data/output
2021-09-03T17:50:05,704   creating build/lib/pele_platform/Examples/analysis/data/output/0
2021-09-03T17:50:05,706   copying pele_platform/Examples/analysis/data/output/0/report_1 -> build/lib/pele_platform/Examples/analysis/data/output/0
2021-09-03T17:50:05,711   copying pele_platform/Examples/analysis/data/output/0/topologyMapping.txt -> build/lib/pele_platform/Examples/analysis/data/output/0
2021-09-03T17:50:05,716   copying pele_platform/Examples/analysis/data/output/0/trajectory_1.pdb -> build/lib/pele_platform/Examples/analysis/data/output/0
2021-09-03T17:50:05,754   creating build/lib/pele_platform/Examples/analysis/data/output/0/clustering
2021-09-03T17:50:05,756   copying pele_platform/Examples/analysis/data/output/0/clustering/object.pkl -> build/lib/pele_platform/Examples/analysis/data/output/0/clustering
2021-09-03T17:50:05,797   copying pele_platform/Examples/analysis/data/output/0/clustering/summary.txt -> build/lib/pele_platform/Examples/analysis/data/output/0/clustering
2021-09-03T17:50:05,804   creating build/lib/pele_platform/Examples/analysis/data/output/synchronization
2021-09-03T17:50:05,806   copying pele_platform/Examples/analysis/data/output/synchronization/syncFile.lock -> build/lib/pele_platform/Examples/analysis/data/output/synchronization
2021-09-03T17:50:05,812   creating build/lib/pele_platform/Examples/analysis/data/output/topologies
2021-09-03T17:50:05,814   copying pele_platform/Examples/analysis/data/output/topologies/topologies.pkl -> build/lib/pele_platform/Examples/analysis/data/output/topologies
2021-09-03T17:50:05,847   copying pele_platform/Examples/analysis/data/output/topologies/topology_0.pdb -> build/lib/pele_platform/Examples/analysis/data/output/topologies
2021-09-03T17:50:05,886   creating build/lib/pele_platform/Examples/analysis/data/xtc
2021-09-03T17:50:05,888   copying pele_platform/Examples/analysis/data/xtc/summary.csv -> build/lib/pele_platform/Examples/analysis/data/xtc
2021-09-03T17:50:05,895   creating build/lib/pele_platform/Examples/analysis/data/xtc/0
2021-09-03T17:50:05,898   copying pele_platform/Examples/analysis/data/xtc/0/report_1 -> build/lib/pele_platform/Examples/analysis/data/xtc/0
2021-09-03T17:50:05,905   copying pele_platform/Examples/analysis/data/xtc/0/report_2 -> build/lib/pele_platform/Examples/analysis/data/xtc/0
2021-09-03T17:50:05,911   copying pele_platform/Examples/analysis/data/xtc/0/trajectory_1.xtc -> build/lib/pele_platform/Examples/analysis/data/xtc/0
2021-09-03T17:50:05,917   copying pele_platform/Examples/analysis/data/xtc/0/trajectory_2.xtc -> build/lib/pele_platform/Examples/analysis/data/xtc/0
2021-09-03T17:50:05,922   creating build/lib/pele_platform/Examples/analysis/data/xtc/topologies
2021-09-03T17:50:05,924   copying pele_platform/Examples/analysis/data/xtc/topologies/topology_0.pdb -> build/lib/pele_platform/Examples/analysis/data/xtc/topologies
2021-09-03T17:50:05,939   creating build/lib/pele_platform/Examples/bias
2021-09-03T17:50:05,941   copying pele_platform/Examples/bias/complex.pdb -> build/lib/pele_platform/Examples/bias
2021-09-03T17:50:05,977   copying pele_platform/Examples/bias/input_defaults.yaml -> build/lib/pele_platform/Examples/bias
2021-09-03T17:50:05,982   creating build/lib/pele_platform/Examples/box
2021-09-03T17:50:05,984   copying pele_platform/Examples/box/input.yaml -> build/lib/pele_platform/Examples/box
2021-09-03T17:50:05,989   creating build/lib/pele_platform/Examples/checker
2021-09-03T17:50:05,992   copying pele_platform/Examples/checker/complex.pdb -> build/lib/pele_platform/Examples/checker
2021-09-03T17:50:06,041   copying pele_platform/Examples/checker/complex2.pdb -> build/lib/pele_platform/Examples/checker
2021-09-03T17:50:06,067   copying pele_platform/Examples/checker/complex_unk.yaml -> build/lib/pele_platform/Examples/checker
2021-09-03T17:50:06,132   copying pele_platform/Examples/checker/incompatible_flags.yaml -> build/lib/pele_platform/Examples/checker
2021-09-03T17:50:06,137   copying pele_platform/Examples/checker/input.yaml -> build/lib/pele_platform/Examples/checker
2021-09-03T17:50:06,142   copying pele_platform/Examples/checker/input_atom_string.yaml -> build/lib/pele_platform/Examples/checker
2021-09-03T17:50:06,146   copying pele_platform/Examples/checker/input_env.yaml -> build/lib/pele_platform/Examples/checker
2021-09-03T17:50:06,151   copying pele_platform/Examples/checker/input_map_atom_num.yaml -> build/lib/pele_platform/Examples/checker
2021-09-03T17:50:06,155   copying pele_platform/Examples/checker/input_map_atom_str.yaml -> build/lib/pele_platform/Examples/checker
2021-09-03T17:50:06,160   copying pele_platform/Examples/checker/input_pele_exec.yaml -> build/lib/pele_platform/Examples/checker
2021-09-03T17:50:06,164   copying pele_platform/Examples/checker/input_rotamer.yaml -> build/lib/pele_platform/Examples/checker
2021-09-03T17:50:06,169   copying pele_platform/Examples/checker/input_space.yaml -> build/lib/pele_platform/Examples/checker
2021-09-03T17:50:06,173   copying pele_platform/Examples/checker/input_tab.yaml -> build/lib/pele_platform/Examples/checker
2021-09-03T17:50:06,178   copying pele_platform/Examples/checker/input_template.yaml -> build/lib/pele_platform/Examples/checker
2021-09-03T17:50:06,183   copying pele_platform/Examples/checker/input_underscore.yaml -> build/lib/pele_platform/Examples/checker
2021-09-03T17:50:06,188   copying pele_platform/Examples/checker/input_unk.yaml -> build/lib/pele_platform/Examples/checker
2021-09-03T17:50:06,192   copying pele_platform/Examples/checker/ligand2.pdb -> build/lib/pele_platform/Examples/checker
2021-09-03T17:50:06,198   copying pele_platform/Examples/checker/mapping_complex.pdb -> build/lib/pele_platform/Examples/checker
2021-09-03T17:50:06,261   copying pele_platform/Examples/checker/multiple_simulations.yaml -> build/lib/pele_platform/Examples/checker
2021-09-03T17:50:06,266   copying pele_platform/Examples/checker/negative_residues.pdb -> build/lib/pele_platform/Examples/checker
2021-09-03T17:50:06,270   creating build/lib/pele_platform/Examples/clustering
2021-09-03T17:50:06,272   copying pele_platform/Examples/clustering/summary.csv -> build/lib/pele_platform/Examples/clustering
2021-09-03T17:50:06,278   creating build/lib/pele_platform/Examples/clustering/0
2021-09-03T17:50:06,281   copying pele_platform/Examples/clustering/0/report_1 -> build/lib/pele_platform/Examples/clustering/0
2021-09-03T17:50:06,287   copying pele_platform/Examples/clustering/0/report_2 -> build/lib/pele_platform/Examples/clustering/0
2021-09-03T17:50:06,294   copying pele_platform/Examples/clustering/0/report_3 -> build/lib/pele_platform/Examples/clustering/0
2021-09-03T17:50:06,299   copying pele_platform/Examples/clustering/0/report_4 -> build/lib/pele_platform/Examples/clustering/0
2021-09-03T17:50:06,303   copying pele_platform/Examples/clustering/0/topologyMapping.txt -> build/lib/pele_platform/Examples/clustering/0
2021-09-03T17:50:06,308   copying pele_platform/Examples/clustering/0/trajectory_1.pdb -> build/lib/pele_platform/Examples/clustering/0
2021-09-03T17:50:06,376   copying pele_platform/Examples/clustering/0/trajectory_2.pdb -> build/lib/pele_platform/Examples/clustering/0
2021-09-03T17:50:06,412   copying pele_platform/Examples/clustering/0/trajectory_3.pdb -> build/lib/pele_platform/Examples/clustering/0
2021-09-03T17:50:06,480   copying pele_platform/Examples/clustering/0/trajectory_4.pdb -> build/lib/pele_platform/Examples/clustering/0
2021-09-03T17:50:06,551   creating build/lib/pele_platform/Examples/clustering/0/clustering
2021-09-03T17:50:06,554   copying pele_platform/Examples/clustering/0/clustering/object.pkl -> build/lib/pele_platform/Examples/clustering/0/clustering
2021-09-03T17:50:06,780   copying pele_platform/Examples/clustering/0/clustering/summary.txt -> build/lib/pele_platform/Examples/clustering/0/clustering
2021-09-03T17:50:06,786   creating build/lib/pele_platform/Examples/clustering_xtc
2021-09-03T17:50:06,788   copying pele_platform/Examples/clustering_xtc/water_clustering.yaml -> build/lib/pele_platform/Examples/clustering_xtc
2021-09-03T17:50:06,795   creating build/lib/pele_platform/Examples/clustering_xtc/0
2021-09-03T17:50:06,798   copying pele_platform/Examples/clustering_xtc/0/report_1 -> build/lib/pele_platform/Examples/clustering_xtc/0
2021-09-03T17:50:06,805   copying pele_platform/Examples/clustering_xtc/0/report_2 -> build/lib/pele_platform/Examples/clustering_xtc/0
2021-09-03T17:50:06,811   copying pele_platform/Examples/clustering_xtc/0/report_3 -> build/lib/pele_platform/Examples/clustering_xtc/0
2021-09-03T17:50:06,816   copying pele_platform/Examples/clustering_xtc/0/report_4 -> build/lib/pele_platform/Examples/clustering_xtc/0
2021-09-03T17:50:06,820   copying pele_platform/Examples/clustering_xtc/0/topology.pdb -> build/lib/pele_platform/Examples/clustering_xtc/0
2021-09-03T17:50:06,858   copying pele_platform/Examples/clustering_xtc/0/trajectory_1.xtc -> build/lib/pele_platform/Examples/clustering_xtc/0
2021-09-03T17:50:06,868   copying pele_platform/Examples/clustering_xtc/0/trajectory_2.xtc -> build/lib/pele_platform/Examples/clustering_xtc/0
2021-09-03T17:50:06,877   copying pele_platform/Examples/clustering_xtc/0/trajectory_3.xtc -> build/lib/pele_platform/Examples/clustering_xtc/0
2021-09-03T17:50:06,887   copying pele_platform/Examples/clustering_xtc/0/trajectory_4.xtc -> build/lib/pele_platform/Examples/clustering_xtc/0
2021-09-03T17:50:06,897   creating build/lib/pele_platform/Examples/constraints
2021-09-03T17:50:06,900   copying pele_platform/Examples/constraints/1zop.pdb -> build/lib/pele_platform/Examples/constraints
2021-09-03T17:50:06,931   copying pele_platform/Examples/constraints/4l3a_prep.pdb -> build/lib/pele_platform/Examples/constraints
2021-09-03T17:50:06,982   copying pele_platform/Examples/constraints/4qnr_prep.pdb -> build/lib/pele_platform/Examples/constraints
2021-09-03T17:50:07,033   copying pele_platform/Examples/constraints/4w4o_prep.pdb -> build/lib/pele_platform/Examples/constraints
2021-09-03T17:50:07,066   copying pele_platform/Examples/constraints/4w5i_prep.pdb -> build/lib/pele_platform/Examples/constraints
2021-09-03T17:50:07,097   copying pele_platform/Examples/constraints/4zu9_prep.pdb -> build/lib/pele_platform/Examples/constraints
2021-09-03T17:50:07,205   copying pele_platform/Examples/constraints/ca_constraints.pdb -> build/lib/pele_platform/Examples/constraints
2021-09-03T17:50:07,269   copying pele_platform/Examples/constraints/complex_smiles_error.pdb -> build/lib/pele_platform/Examples/constraints
2021-09-03T17:50:07,313   copying pele_platform/Examples/constraints/fail_input_permissive_constraints.yaml -> build/lib/pele_platform/Examples/constraints
2021-09-03T17:50:07,319   copying pele_platform/Examples/constraints/input_all_metal_constraints.yaml -> build/lib/pele_platform/Examples/constraints
2021-09-03T17:50:07,325   copying pele_platform/Examples/constraints/input_ca_noppp.yaml -> build/lib/pele_platform/Examples/constraints
2021-09-03T17:50:07,331   copying pele_platform/Examples/constraints/input_ca_ppp.yaml -> build/lib/pele_platform/Examples/constraints
2021-09-03T17:50:07,337   copying pele_platform/Examples/constraints/input_constrain_smarts.yaml -> build/lib/pele_platform/Examples/constraints
2021-09-03T17:50:07,344   copying pele_platform/Examples/constraints/input_constrain_smiles.yaml -> build/lib/pele_platform/Examples/constraints
2021-09-03T17:50:07,350   copying pele_platform/Examples/constraints/input_external_constraints.yaml -> build/lib/pele_platform/Examples/constraints
2021-09-03T17:50:07,356   copying pele_platform/Examples/constraints/input_ignore.yaml -> build/lib/pele_platform/Examples/constraints
2021-09-03T17:50:07,360   copying pele_platform/Examples/constraints/input_k.yaml -> build/lib/pele_platform/Examples/constraints
2021-09-03T17:50:07,365   copying pele_platform/Examples/constraints/input_metals.yaml -> build/lib/pele_platform/Examples/constraints
2021-09-03T17:50:07,369   copying pele_platform/Examples/constraints/input_no_metal_constraints.yaml -> build/lib/pele_platform/Examples/constraints
2021-09-03T17:50:07,374   copying pele_platform/Examples/constraints/input_permissive_exception.yaml -> build/lib/pele_platform/Examples/constraints
2021-09-03T17:50:07,379   copying pele_platform/Examples/constraints/input_smiles_error.yaml -> build/lib/pele_platform/Examples/constraints
2021-09-03T17:50:07,385   copying pele_platform/Examples/constraints/input_square_planar.yaml -> build/lib/pele_platform/Examples/constraints
2021-09-03T17:50:07,392   copying pele_platform/Examples/constraints/input_square_planar_polarisation.yaml -> build/lib/pele_platform/Examples/constraints
2021-09-03T17:50:07,398   copying pele_platform/Examples/constraints/input_tetrahedral.yaml -> build/lib/pele_platform/Examples/constraints
2021-09-03T17:50:07,405   copying pele_platform/Examples/constraints/no_connects.pdb -> build/lib/pele_platform/Examples/constraints
2021-09-03T17:50:07,411   copying pele_platform/Examples/constraints/pass_input_permissive_constraints.yaml -> build/lib/pele_platform/Examples/constraints
2021-09-03T17:50:07,417   creating build/lib/pele_platform/Examples/covalent_docking
2021-09-03T17:50:07,419   copying pele_platform/Examples/covalent_docking/5XXD_prepared.pdb -> build/lib/pele_platform/Examples/covalent_docking
2021-09-03T17:50:07,478   copying pele_platform/Examples/covalent_docking/6M06_prepared.pdb -> build/lib/pele_platform/Examples/covalent_docking
2021-09-03T17:50:07,531   copying pele_platform/Examples/covalent_docking/6P0M_prepared.pdb -> build/lib/pele_platform/Examples/covalent_docking
2021-09-03T17:50:07,569   copying pele_platform/Examples/covalent_docking/input1.yaml -> build/lib/pele_platform/Examples/covalent_docking
2021-09-03T17:50:07,575   copying pele_platform/Examples/covalent_docking/input2.yaml -> build/lib/pele_platform/Examples/covalent_docking
2021-09-03T17:50:07,582   copying pele_platform/Examples/covalent_docking/input3.yaml -> build/lib/pele_platform/Examples/covalent_docking
2021-09-03T17:50:07,588   copying pele_platform/Examples/covalent_docking/input_defaults.yaml -> build/lib/pele_platform/Examples/covalent_docking
2021-09-03T17:50:07,594   copying pele_platform/Examples/covalent_docking/input_defaults_refinement.yaml -> build/lib/pele_platform/Examples/covalent_docking
2021-09-03T17:50:07,600   creating build/lib/pele_platform/Examples/enzyme_engineering
2021-09-03T17:50:07,602   copying pele_platform/Examples/enzyme_engineering/restart_saturated_mutagenesis.yaml -> build/lib/pele_platform/Examples/enzyme_engineering
2021-09-03T17:50:07,607   copying pele_platform/Examples/enzyme_engineering/saturated_mutagenesis.yaml -> build/lib/pele_platform/Examples/enzyme_engineering
2021-09-03T17:50:07,611   copying pele_platform/Examples/enzyme_engineering/wrong_cpus.yaml -> build/lib/pele_platform/Examples/enzyme_engineering
2021-09-03T17:50:07,615   creating build/lib/pele_platform/Examples/enzyme_engineering/directory_to_restart
2021-09-03T17:50:07,617   copying pele_platform/Examples/enzyme_engineering/directory_to_restart/completed_mutations.log -> build/lib/pele_platform/Examples/enzyme_engineering/directory_to_restart
2021-09-03T17:50:07,623   creating build/lib/pele_platform/Examples/enzyme_engineering/directory_to_restart/Subset_1
2021-09-03T17:50:07,625   copying pele_platform/Examples/enzyme_engineering/directory_to_restart/Subset_1/ANL.mae -> build/lib/pele_platform/Examples/enzyme_engineering/directory_to_restart/Subset_1
2021-09-03T17:50:07,632   copying pele_platform/Examples/enzyme_engineering/directory_to_restart/Subset_1/adaptive.conf -> build/lib/pele_platform/Examples/enzyme_engineering/directory_to_restart/Subset_1
2021-09-03T17:50:07,638   copying pele_platform/Examples/enzyme_engineering/directory_to_restart/Subset_1/pele.conf -> build/lib/pele_platform/Examples/enzyme_engineering/directory_to_restart/Subset_1
2021-09-03T17:50:07,645   copying pele_platform/Examples/enzyme_engineering/directory_to_restart/Subset_1/restart_saturated_mutagenesis.yaml -> build/lib/pele_platform/Examples/enzyme_engineering/directory_to_restart/Subset_1
2021-09-03T17:50:07,650   creating build/lib/pele_platform/Examples/enzyme_engineering/directory_to_restart/Subset_1/DataLocal
2021-09-03T17:50:07,650   creating build/lib/pele_platform/Examples/enzyme_engineering/directory_to_restart/Subset_1/DataLocal/LigandRotamerLibs
2021-09-03T17:50:07,653   copying pele_platform/Examples/enzyme_engineering/directory_to_restart/Subset_1/DataLocal/LigandRotamerLibs/ANL.rot.assign -> build/lib/pele_platform/Examples/enzyme_engineering/directory_to_restart/Subset_1/DataLocal/LigandRotamerLibs
2021-09-03T17:50:07,658   creating build/lib/pele_platform/Examples/enzyme_engineering/directory_to_restart/Subset_1/DataLocal/Templates
2021-09-03T17:50:07,658   creating build/lib/pele_platform/Examples/enzyme_engineering/directory_to_restart/Subset_1/DataLocal/Templates/OPLS2005
2021-09-03T17:50:07,660   creating build/lib/pele_platform/Examples/enzyme_engineering/directory_to_restart/Subset_1/DataLocal/Templates/OPLS2005/HeteroAtoms
2021-09-03T17:50:07,663   copying pele_platform/Examples/enzyme_engineering/directory_to_restart/Subset_1/DataLocal/Templates/OPLS2005/HeteroAtoms/anlz -> build/lib/pele_platform/Examples/enzyme_engineering/directory_to_restart/Subset_1/DataLocal/Templates/OPLS2005/HeteroAtoms
2021-09-03T17:50:07,671   creating build/lib/pele_platform/Examples/enzyme_engineering/directory_to_restart/Subset_1/input
2021-09-03T17:50:07,674   copying pele_platform/Examples/enzyme_engineering/directory_to_restart/Subset_1/input/T454A.pdb -> build/lib/pele_platform/Examples/enzyme_engineering/directory_to_restart/Subset_1/input
2021-09-03T17:50:07,737   copying pele_platform/Examples/enzyme_engineering/directory_to_restart/Subset_1/input/T454A_processed.pdb -> build/lib/pele_platform/Examples/enzyme_engineering/directory_to_restart/Subset_1/input
2021-09-03T17:50:07,801   copying pele_platform/Examples/enzyme_engineering/directory_to_restart/Subset_1/input/T454D.pdb -> build/lib/pele_platform/Examples/enzyme_engineering/directory_to_restart/Subset_1/input
2021-09-03T17:50:07,865   copying pele_platform/Examples/enzyme_engineering/directory_to_restart/Subset_1/input/T454D_processed.pdb -> build/lib/pele_platform/Examples/enzyme_engineering/directory_to_restart/Subset_1/input
2021-09-03T17:50:07,928   copying pele_platform/Examples/enzyme_engineering/directory_to_restart/Subset_1/input/ligand.pdb -> build/lib/pele_platform/Examples/enzyme_engineering/directory_to_restart/Subset_1/input
2021-09-03T17:50:07,935   copying pele_platform/Examples/enzyme_engineering/directory_to_restart/Subset_1/input/receptor.pdb -> build/lib/pele_platform/Examples/enzyme_engineering/directory_to_restart/Subset_1/input
2021-09-03T17:50:07,998   creating build/lib/pele_platform/Examples/enzyme_engineering/directory_to_restart/Subset_1/output
2021-09-03T17:50:08,001   copying pele_platform/Examples/enzyme_engineering/directory_to_restart/Subset_1/output/originalControlFile.conf -> build/lib/pele_platform/Examples/enzyme_engineering/directory_to_restart/Subset_1/output
2021-09-03T17:50:08,007   creating build/lib/pele_platform/Examples/enzyme_engineering/directory_to_restart/Subset_1/output/0
2021-09-03T17:50:08,010   copying pele_platform/Examples/enzyme_engineering/directory_to_restart/Subset_1/output/0/topologyMapping.txt -> build/lib/pele_platform/Examples/enzyme_engineering/directory_to_restart/Subset_1/output/0
2021-09-03T17:50:08,016   creating build/lib/pele_platform/Examples/enzyme_engineering/directory_to_restart/Subset_1/output/0/clustering
2021-09-03T17:50:08,018   copying pele_platform/Examples/enzyme_engineering/directory_to_restart/Subset_1/output/0/clustering/object.pkl -> build/lib/pele_platform/Examples/enzyme_engineering/directory_to_restart/Subset_1/output/0/clustering
2021-09-03T17:50:08,022   copying pele_platform/Examples/enzyme_engineering/directory_to_restart/Subset_1/output/0/clustering/summary.txt -> build/lib/pele_platform/Examples/enzyme_engineering/directory_to_restart/Subset_1/output/0/clustering
2021-09-03T17:50:08,027   creating build/lib/pele_platform/Examples/enzyme_engineering/directory_to_restart/Subset_1/output/T454A
2021-09-03T17:50:08,029   copying pele_platform/Examples/enzyme_engineering/directory_to_restart/Subset_1/output/T454A/report_1 -> build/lib/pele_platform/Examples/enzyme_engineering/directory_to_restart/Subset_1/output/T454A
2021-09-03T17:50:08,034   copying pele_platform/Examples/enzyme_engineering/directory_to_restart/Subset_1/output/T454A/report_3 -> build/lib/pele_platform/Examples/enzyme_engineering/directory_to_restart/Subset_1/output/T454A
2021-09-03T17:50:08,040   copying pele_platform/Examples/enzyme_engineering/directory_to_restart/Subset_1/output/T454A/trajectory_1.pdb -> build/lib/pele_platform/Examples/enzyme_engineering/directory_to_restart/Subset_1/output/T454A
2021-09-03T17:50:08,159   copying pele_platform/Examples/enzyme_engineering/directory_to_restart/Subset_1/output/T454A/trajectory_3.pdb -> build/lib/pele_platform/Examples/enzyme_engineering/directory_to_restart/Subset_1/output/T454A
2021-09-03T17:50:08,276   creating build/lib/pele_platform/Examples/enzyme_engineering/directory_to_restart/Subset_1/output/T454D
2021-09-03T17:50:08,279   copying pele_platform/Examples/enzyme_engineering/directory_to_restart/Subset_1/output/T454D/report_2 -> build/lib/pele_platform/Examples/enzyme_engineering/directory_to_restart/Subset_1/output/T454D
2021-09-03T17:50:08,286   copying pele_platform/Examples/enzyme_engineering/directory_to_restart/Subset_1/output/T454D/report_4 -> build/lib/pele_platform/Examples/enzyme_engineering/directory_to_restart/Subset_1/output/T454D
2021-09-03T17:50:08,292   copying pele_platform/Examples/enzyme_engineering/directory_to_restart/Subset_1/output/T454D/trajectory_2.pdb -> build/lib/pele_platform/Examples/enzyme_engineering/directory_to_restart/Subset_1/output/T454D
2021-09-03T17:50:08,412   copying pele_platform/Examples/enzyme_engineering/directory_to_restart/Subset_1/output/T454D/trajectory_4.pdb -> build/lib/pele_platform/Examples/enzyme_engineering/directory_to_restart/Subset_1/output/T454D
2021-09-03T17:50:08,531   creating build/lib/pele_platform/Examples/enzyme_engineering/directory_to_restart/Subset_1/output/synchronization
2021-09-03T17:50:08,534   copying pele_platform/Examples/enzyme_engineering/directory_to_restart/Subset_1/output/synchronization/syncFile.lock -> build/lib/pele_platform/Examples/enzyme_engineering/directory_to_restart/Subset_1/output/synchronization
2021-09-03T17:50:08,541   creating build/lib/pele_platform/Examples/enzyme_engineering/directory_to_restart/Subset_1/output/topologies
2021-09-03T17:50:08,543   copying pele_platform/Examples/enzyme_engineering/directory_to_restart/Subset_1/output/topologies/topologies.pkl -> build/lib/pele_platform/Examples/enzyme_engineering/directory_to_restart/Subset_1/output/topologies
2021-09-03T17:50:08,653   copying pele_platform/Examples/enzyme_engineering/directory_to_restart/Subset_1/output/topologies/topology_0.pdb -> build/lib/pele_platform/Examples/enzyme_engineering/directory_to_restart/Subset_1/output/topologies
2021-09-03T17:50:08,717   copying pele_platform/Examples/enzyme_engineering/directory_to_restart/Subset_1/output/topologies/topology_1.pdb -> build/lib/pele_platform/Examples/enzyme_engineering/directory_to_restart/Subset_1/output/topologies
2021-09-03T17:50:08,777   creating build/lib/pele_platform/Examples/enzyme_engineering/directory_to_restart/Subset_1/tmp_output
2021-09-03T17:50:08,780   copying pele_platform/Examples/enzyme_engineering/directory_to_restart/Subset_1/tmp_output/controlFile0.conf -> build/lib/pele_platform/Examples/enzyme_engineering/directory_to_restart/Subset_1/tmp_output
2021-09-03T17:50:08,789   copying pele_platform/Examples/enzyme_engineering/directory_to_restart/Subset_1/tmp_output/initial_0_0.pdb -> build/lib/pele_platform/Examples/enzyme_engineering/directory_to_restart/Subset_1/tmp_output
2021-09-03T17:50:08,851   copying pele_platform/Examples/enzyme_engineering/directory_to_restart/Subset_1/tmp_output/initial_0_1.pdb -> build/lib/pele_platform/Examples/enzyme_engineering/directory_to_restart/Subset_1/tmp_output
2021-09-03T17:50:08,910   creating build/lib/pele_platform/Examples/enzyme_engineering/directory_to_restart/Subset_2
2021-09-03T17:50:08,912   copying pele_platform/Examples/enzyme_engineering/directory_to_restart/Subset_2/ANL.mae -> build/lib/pele_platform/Examples/enzyme_engineering/directory_to_restart/Subset_2
2021-09-03T17:50:08,917   copying pele_platform/Examples/enzyme_engineering/directory_to_restart/Subset_2/adaptive.conf -> build/lib/pele_platform/Examples/enzyme_engineering/directory_to_restart/Subset_2
2021-09-03T17:50:08,923   copying pele_platform/Examples/enzyme_engineering/directory_to_restart/Subset_2/pele.conf -> build/lib/pele_platform/Examples/enzyme_engineering/directory_to_restart/Subset_2
2021-09-03T17:50:08,930   copying pele_platform/Examples/enzyme_engineering/directory_to_restart/Subset_2/restart_saturated_mutagenesis.yaml -> build/lib/pele_platform/Examples/enzyme_engineering/directory_to_restart/Subset_2
2021-09-03T17:50:08,936   creating build/lib/pele_platform/Examples/enzyme_engineering/directory_to_restart/Subset_2/input
2021-09-03T17:50:08,939   copying pele_platform/Examples/enzyme_engineering/directory_to_restart/Subset_2/input/T454E.pdb -> build/lib/pele_platform/Examples/enzyme_engineering/directory_to_restart/Subset_2/input
2021-09-03T17:50:09,003   copying pele_platform/Examples/enzyme_engineering/directory_to_restart/Subset_2/input/T454E_processed.pdb -> build/lib/pele_platform/Examples/enzyme_engineering/directory_to_restart/Subset_2/input
2021-09-03T17:50:09,066   copying pele_platform/Examples/enzyme_engineering/directory_to_restart/Subset_2/input/ligand.pdb -> build/lib/pele_platform/Examples/enzyme_engineering/directory_to_restart/Subset_2/input
2021-09-03T17:50:09,073   copying pele_platform/Examples/enzyme_engineering/directory_to_restart/Subset_2/input/receptor.pdb -> build/lib/pele_platform/Examples/enzyme_engineering/directory_to_restart/Subset_2/input
2021-09-03T17:50:09,136   creating build/lib/pele_platform/Examples/enzyme_engineering/pdb_files
2021-09-03T17:50:09,138   copying pele_platform/Examples/enzyme_engineering/pdb_files/T454A.pdb -> build/lib/pele_platform/Examples/enzyme_engineering/pdb_files
2021-09-03T17:50:09,202   copying pele_platform/Examples/enzyme_engineering/pdb_files/T454D.pdb -> build/lib/pele_platform/Examples/enzyme_engineering/pdb_files
2021-09-03T17:50:09,265   copying pele_platform/Examples/enzyme_engineering/pdb_files/T454E.pdb -> build/lib/pele_platform/Examples/enzyme_engineering/pdb_files
2021-09-03T17:50:09,329   creating build/lib/pele_platform/Examples/exit
2021-09-03T17:50:09,331   copying pele_platform/Examples/exit/input.yaml -> build/lib/pele_platform/Examples/exit
2021-09-03T17:50:09,338   copying pele_platform/Examples/exit/input_defaults.yaml -> build/lib/pele_platform/Examples/exit
2021-09-03T17:50:09,345   creating build/lib/pele_platform/Examples/exit_soft
2021-09-03T17:50:09,347   copying pele_platform/Examples/exit_soft/input.yaml -> build/lib/pele_platform/Examples/exit_soft
2021-09-03T17:50:09,354   copying pele_platform/Examples/exit_soft/input_defaults.yaml -> build/lib/pele_platform/Examples/exit_soft
2021-09-03T17:50:09,360   creating build/lib/pele_platform/Examples/flags
2021-09-03T17:50:09,362   copying pele_platform/Examples/flags/input.yaml -> build/lib/pele_platform/Examples/flags
2021-09-03T17:50:09,369   creating build/lib/pele_platform/Examples/frag
2021-09-03T17:50:09,371   copying pele_platform/Examples/frag/1dyi_no_waters.pdb -> build/lib/pele_platform/Examples/frag
2021-09-03T17:50:09,398   copying pele_platform/Examples/frag/1dyi_waters.pdb -> build/lib/pele_platform/Examples/frag
2021-09-03T17:50:09,425   copying pele_platform/Examples/frag/1w7h_preparation_structure_2w.pdb -> build/lib/pele_platform/Examples/frag
2021-09-03T17:50:09,475   copying pele_platform/Examples/frag/1w7h_preparation_structure_2w_processed.pdb -> build/lib/pele_platform/Examples/frag
2021-09-03T17:50:09,524   copying pele_platform/Examples/frag/amino.pdb -> build/lib/pele_platform/Examples/frag
2021-09-03T17:50:09,530   copying pele_platform/Examples/frag/core.pdb -> build/lib/pele_platform/Examples/frag
2021-09-03T17:50:09,537   copying pele_platform/Examples/frag/flags.conf -> build/lib/pele_platform/Examples/frag
2021-09-03T17:50:09,543   copying pele_platform/Examples/frag/input_ai.yaml -> build/lib/pele_platform/Examples/frag
2021-09-03T17:50:09,549   copying pele_platform/Examples/frag/input_core.yaml -> build/lib/pele_platform/Examples/frag
2021-09-03T17:50:09,556   copying pele_platform/Examples/frag/input_core_sdf.yaml -> build/lib/pele_platform/Examples/frag
2021-09-03T17:50:09,562   copying pele_platform/Examples/frag/input_flags.yaml -> build/lib/pele_platform/Examples/frag
2021-09-03T17:50:09,567   copying pele_platform/Examples/frag/input_frag_waters.yaml -> build/lib/pele_platform/Examples/frag
2021-09-03T17:50:09,571   copying pele_platform/Examples/frag/input_fragment_atom.yaml -> build/lib/pele_platform/Examples/frag
2021-09-03T17:50:09,576   copying pele_platform/Examples/frag/input_lib_pdb.yaml -> build/lib/pele_platform/Examples/frag
2021-09-03T17:50:09,581   copying pele_platform/Examples/frag/input_lib_sdf.yaml -> build/lib/pele_platform/Examples/frag
2021-09-03T17:50:09,587   copying pele_platform/Examples/frag/input_point_analysis.yaml -> build/lib/pele_platform/Examples/frag
2021-09-03T17:50:09,593   copying pele_platform/Examples/frag/input_sim.yaml -> build/lib/pele_platform/Examples/frag
2021-09-03T17:50:09,600   copying pele_platform/Examples/frag/input_sim_xtc.yaml -> build/lib/pele_platform/Examples/frag
2021-09-03T17:50:09,606   copying pele_platform/Examples/frag/input_symmetry.yaml -> build/lib/pele_platform/Examples/frag
2021-09-03T17:50:09,612   copying pele_platform/Examples/frag/ligands.sdf -> build/lib/pele_platform/Examples/frag
2021-09-03T17:50:09,619   copying pele_platform/Examples/frag/ligands_water.sdf -> build/lib/pele_platform/Examples/frag
2021-09-03T17:50:09,627   copying pele_platform/Examples/frag/sequential.conf -> build/lib/pele_platform/Examples/frag
2021-09-03T17:50:09,633   creating build/lib/pele_platform/Examples/frag/analysis_data
2021-09-03T17:50:09,635   creating build/lib/pele_platform/Examples/frag/analysis_data/1w7h_preparation_structure_2w_processed_mol1C3-H2C1-H1
2021-09-03T17:50:09,636   creating build/lib/pele_platform/Examples/frag/analysis_data/1w7h_preparation_structure_2w_processed_mol1C3-H2C1-H1/top_result
2021-09-03T17:50:09,640   copying pele_platform/Examples/frag/analysis_data/1w7h_preparation_structure_2w_processed_mol1C3-H2C1-H1/top_result/epochsampling_result_trajectory_1.1_BindingEnergy-23.4636.pdb -> build/lib/pele_platform/Examples/frag/analysis_data/1w7h_preparation_structure_2w_processed_mol1C3-H2C1-H1/top_result
2021-09-03T17:50:09,689   copying pele_platform/Examples/frag/analysis_data/1w7h_preparation_structure_2w_processed_mol1C3-H2C1-H1/top_result/epochsampling_result_trajectory_2.1_BindingEnergy-25.1634.pdb -> build/lib/pele_platform/Examples/frag/analysis_data/1w7h_preparation_structure_2w_processed_mol1C3-H2C1-H1/top_result
2021-09-03T17:50:09,737   creating build/lib/pele_platform/Examples/frag/checker
2021-09-03T17:50:09,739   copying pele_platform/Examples/frag/checker/4RFM_proc.pdb -> build/lib/pele_platform/Examples/frag/checker
2021-09-03T17:50:09,745   copying pele_platform/Examples/frag/checker/4RFM_series.sdf -> build/lib/pele_platform/Examples/frag/checker
2021-09-03T17:50:09,752   copying pele_platform/Examples/frag/checker/receptor.sdf -> build/lib/pele_platform/Examples/frag/checker
2021-09-03T17:50:09,784   creating build/lib/pele_platform/Examples/frag/pdb_test_lib
2021-09-03T17:50:09,786   copying pele_platform/Examples/frag/pdb_test_lib/mol1.pdb -> build/lib/pele_platform/Examples/frag/pdb_test_lib
2021-09-03T17:50:09,793   copying pele_platform/Examples/frag/pdb_test_lib/mol2.pdb -> build/lib/pele_platform/Examples/frag/pdb_test_lib
2021-09-03T17:50:09,800   creating build/lib/pele_platform/Examples/frag/sdf_joiner
2021-09-03T17:50:09,803   copying pele_platform/Examples/frag/sdf_joiner/13_serie.sdf -> build/lib/pele_platform/Examples/frag/sdf_joiner
2021-09-03T17:50:09,815   copying pele_platform/Examples/frag/sdf_joiner/4RFM_core_sc.pdb -> build/lib/pele_platform/Examples/frag/sdf_joiner
2021-09-03T17:50:09,865   copying pele_platform/Examples/frag/sdf_joiner/4RFM_proc.pdb -> build/lib/pele_platform/Examples/frag/sdf_joiner
2021-09-03T17:50:09,914   copying pele_platform/Examples/frag/sdf_joiner/4RFM_series.sdf -> build/lib/pele_platform/Examples/frag/sdf_joiner
2021-09-03T17:50:09,921   copying pele_platform/Examples/frag/sdf_joiner/core2.pdb -> build/lib/pele_platform/Examples/frag/sdf_joiner
2021-09-03T17:50:09,960   copying pele_platform/Examples/frag/sdf_joiner/core3.pdb -> build/lib/pele_platform/Examples/frag/sdf_joiner
2021-09-03T17:50:09,978   copying pele_platform/Examples/frag/sdf_joiner/frag.sdf -> build/lib/pele_platform/Examples/frag/sdf_joiner
2021-09-03T17:50:09,985   copying pele_platform/Examples/frag/sdf_joiner/frag.yml -> build/lib/pele_platform/Examples/frag/sdf_joiner
2021-09-03T17:50:09,992   copying pele_platform/Examples/frag/sdf_joiner/frag2.sdf -> build/lib/pele_platform/Examples/frag/sdf_joiner
2021-09-03T17:50:10,004   copying pele_platform/Examples/frag/sdf_joiner/frag2.yml -> build/lib/pele_platform/Examples/frag/sdf_joiner
2021-09-03T17:50:10,011   copying pele_platform/Examples/frag/sdf_joiner/frag3.sdf -> build/lib/pele_platform/Examples/frag/sdf_joiner
2021-09-03T17:50:10,020   copying pele_platform/Examples/frag/sdf_joiner/frag3.yml -> build/lib/pele_platform/Examples/frag/sdf_joiner
2021-09-03T17:50:10,025   copying pele_platform/Examples/frag/sdf_joiner/frag31.sdf -> build/lib/pele_platform/Examples/frag/sdf_joiner
2021-09-03T17:50:10,035   copying pele_platform/Examples/frag/sdf_joiner/frag4.yml -> build/lib/pele_platform/Examples/frag/sdf_joiner
2021-09-03T17:50:10,040   copying pele_platform/Examples/frag/sdf_joiner/frag5.yml -> build/lib/pele_platform/Examples/frag/sdf_joiner
2021-09-03T17:50:10,045   copying pele_platform/Examples/frag/sdf_joiner/glide-dockSARS_core.pdb -> build/lib/pele_platform/Examples/frag/sdf_joiner
2021-09-03T17:50:10,120   creating build/lib/pele_platform/Examples/frag/sdf_test_lib
2021-09-03T17:50:10,122   copying pele_platform/Examples/frag/sdf_test_lib/test_library.sdf -> build/lib/pele_platform/Examples/frag/sdf_test_lib
2021-09-03T17:50:10,127   creating build/lib/pele_platform/Examples/global
2021-09-03T17:50:10,129   copying pele_platform/Examples/global/input.yaml -> build/lib/pele_platform/Examples/global
2021-09-03T17:50:10,135   copying pele_platform/Examples/global/input_defaults.yaml -> build/lib/pele_platform/Examples/global
2021-09-03T17:50:10,142   copying pele_platform/Examples/global/input_inputs.yaml -> build/lib/pele_platform/Examples/global
2021-09-03T17:50:10,149   copying pele_platform/Examples/global/input_inputs_asterisc.yaml -> build/lib/pele_platform/Examples/global
2021-09-03T17:50:10,154   creating build/lib/pele_platform/Examples/gpcr
2021-09-03T17:50:10,156   copying pele_platform/Examples/gpcr/complex.pdb -> build/lib/pele_platform/Examples/gpcr
2021-09-03T17:50:10,199   copying pele_platform/Examples/gpcr/complex_processed.pdb -> build/lib/pele_platform/Examples/gpcr
2021-09-03T17:50:10,243   copying pele_platform/Examples/gpcr/input.yaml -> build/lib/pele_platform/Examples/gpcr
2021-09-03T17:50:10,250   copying pele_platform/Examples/gpcr/input_atom_error.yaml -> build/lib/pele_platform/Examples/gpcr
2021-09-03T17:50:10,256   copying pele_platform/Examples/gpcr/input_defaults.yaml -> build/lib/pele_platform/Examples/gpcr
2021-09-03T17:50:10,261   copying pele_platform/Examples/gpcr/input_defaults2.yaml -> build/lib/pele_platform/Examples/gpcr
2021-09-03T17:50:10,265   creating build/lib/pele_platform/Examples/induced_fit
2021-09-03T17:50:10,267   copying pele_platform/Examples/induced_fit/input_exhaustive.yaml -> build/lib/pele_platform/Examples/induced_fit
2021-09-03T17:50:10,273   copying pele_platform/Examples/induced_fit/input_exhaustive_defaults.yaml -> build/lib/pele_platform/Examples/induced_fit
2021-09-03T17:50:10,279   copying pele_platform/Examples/induced_fit/input_fast.yaml -> build/lib/pele_platform/Examples/induced_fit
2021-09-03T17:50:10,286   copying pele_platform/Examples/induced_fit/input_fast_defaults.yaml -> build/lib/pele_platform/Examples/induced_fit
2021-09-03T17:50:10,292   copying pele_platform/Examples/induced_fit/input_mae.yaml -> build/lib/pele_platform/Examples/induced_fit
2021-09-03T17:50:10,298   creating build/lib/pele_platform/Examples/inputs
2021-09-03T17:50:10,300   copying pele_platform/Examples/inputs/input.yaml -> build/lib/pele_platform/Examples/inputs
2021-09-03T17:50:10,305   copying pele_platform/Examples/inputs/mn4.sl -> build/lib/pele_platform/Examples/inputs
2021-09-03T17:50:10,309   copying pele_platform/Examples/inputs/nord3.sge -> build/lib/pele_platform/Examples/inputs
2021-09-03T17:50:10,314   creating build/lib/pele_platform/Examples/interaction_restrictions
2021-09-03T17:50:10,317   copying pele_platform/Examples/interaction_restrictions/complex.pdb -> build/lib/pele_platform/Examples/interaction_restrictions
2021-09-03T17:50:10,384   copying pele_platform/Examples/interaction_restrictions/input.yaml -> build/lib/pele_platform/Examples/interaction_restrictions
2021-09-03T17:50:10,389   copying pele_platform/Examples/interaction_restrictions/input_error.yaml -> build/lib/pele_platform/Examples/interaction_restrictions
2021-09-03T17:50:10,393   copying pele_platform/Examples/interaction_restrictions/input_error_2.yaml -> build/lib/pele_platform/Examples/interaction_restrictions
2021-09-03T17:50:10,400   creating build/lib/pele_platform/Examples/interaction_restrictions/out
2021-09-03T17:50:10,402   copying pele_platform/Examples/interaction_restrictions/out/expected_conditions.txt -> build/lib/pele_platform/Examples/interaction_restrictions/out
2021-09-03T17:50:10,410   copying pele_platform/Examples/interaction_restrictions/out/expected_metrics.txt -> build/lib/pele_platform/Examples/interaction_restrictions/out
2021-09-03T17:50:10,416   creating build/lib/pele_platform/Examples/ligand_conformations
2021-09-03T17:50:10,418   copying pele_platform/Examples/ligand_conformations/1.pdb -> build/lib/pele_platform/Examples/ligand_conformations
2021-09-03T17:50:10,424   copying pele_platform/Examples/ligand_conformations/2.pdb -> build/lib/pele_platform/Examples/ligand_conformations
2021-09-03T17:50:10,429   copying pele_platform/Examples/ligand_conformations/3.pdb -> build/lib/pele_platform/Examples/ligand_conformations
2021-09-03T17:50:10,435   copying pele_platform/Examples/ligand_conformations/input.yaml -> build/lib/pele_platform/Examples/ligand_conformations
2021-09-03T17:50:10,441   creating build/lib/pele_platform/Examples/minimum_steps
2021-09-03T17:50:10,444   copying pele_platform/Examples/minimum_steps/complex.pdb -> build/lib/pele_platform/Examples/minimum_steps
2021-09-03T17:50:10,514   copying pele_platform/Examples/minimum_steps/input.yaml -> build/lib/pele_platform/Examples/minimum_steps
2021-09-03T17:50:10,519   creating build/lib/pele_platform/Examples/out_in
2021-09-03T17:50:10,521   copying pele_platform/Examples/out_in/1_3ZON_complex.pdb -> build/lib/pele_platform/Examples/out_in
2021-09-03T17:50:10,561   copying pele_platform/Examples/out_in/input.yaml -> build/lib/pele_platform/Examples/out_in
2021-09-03T17:50:10,568   copying pele_platform/Examples/out_in/input_box_center.yaml -> build/lib/pele_platform/Examples/out_in
2021-09-03T17:50:10,574   copying pele_platform/Examples/out_in/input_default.yaml -> build/lib/pele_platform/Examples/out_in
2021-09-03T17:50:10,580   copying pele_platform/Examples/out_in/input_flag_error.yaml -> build/lib/pele_platform/Examples/out_in
2021-09-03T17:50:10,585   copying pele_platform/Examples/out_in/input_metrics.yaml -> build/lib/pele_platform/Examples/out_in
2021-09-03T17:50:10,589   creating build/lib/pele_platform/Examples/pca
2021-09-03T17:50:10,591   copying pele_platform/Examples/pca/1.pdb -> build/lib/pele_platform/Examples/pca
2021-09-03T17:50:10,632   copying pele_platform/Examples/pca/2.pdb -> build/lib/pele_platform/Examples/pca
2021-09-03T17:50:10,672   copying pele_platform/Examples/pca/3.pdb -> build/lib/pele_platform/Examples/pca
2021-09-03T17:50:10,713   copying pele_platform/Examples/pca/input.yaml -> build/lib/pele_platform/Examples/pca
2021-09-03T17:50:10,720   copying pele_platform/Examples/pca/input_str.yaml -> build/lib/pele_platform/Examples/pca
2021-09-03T17:50:10,726   creating build/lib/pele_platform/Examples/preparation
2021-09-03T17:50:10,728   copying pele_platform/Examples/preparation/6qmk_correct.pdb -> build/lib/pele_platform/Examples/preparation
2021-09-03T17:50:10,778   copying pele_platform/Examples/preparation/6qmk_repeated.pdb -> build/lib/pele_platform/Examples/preparation
2021-09-03T17:50:10,836   copying pele_platform/Examples/preparation/complex.pdb -> build/lib/pele_platform/Examples/preparation
2021-09-03T17:50:10,875   copying pele_platform/Examples/preparation/complex_2.pdb -> build/lib/pele_platform/Examples/preparation
2021-09-03T17:50:10,937   copying pele_platform/Examples/preparation/input.yaml -> build/lib/pele_platform/Examples/preparation
2021-09-03T17:50:10,944   copying pele_platform/Examples/preparation/input_nonstandard.yaml -> build/lib/pele_platform/Examples/preparation
2021-09-03T17:50:10,950   copying pele_platform/Examples/preparation/input_space.yaml -> build/lib/pele_platform/Examples/preparation
2021-09-03T17:50:10,957   copying pele_platform/Examples/preparation/parametrization_flags.yaml -> build/lib/pele_platform/Examples/preparation
2021-09-03T17:50:10,964   creating build/lib/pele_platform/Examples/production
2021-09-03T17:50:10,967   copying pele_platform/Examples/production/input.sl -> build/lib/pele_platform/Examples/production
2021-09-03T17:50:10,974   copying pele_platform/Examples/production/input_mae.yaml -> build/lib/pele_platform/Examples/production
2021-09-03T17:50:10,981   creating build/lib/pele_platform/Examples/rescoring
2021-09-03T17:50:10,984   copying pele_platform/Examples/rescoring/input.yaml -> build/lib/pele_platform/Examples/rescoring
2021-09-03T17:50:10,989   copying pele_platform/Examples/rescoring/input_defaults.yaml -> build/lib/pele_platform/Examples/rescoring
2021-09-03T17:50:10,993   creating build/lib/pele_platform/Examples/restart
2021-09-03T17:50:10,995   copying pele_platform/Examples/restart/restart.yaml -> build/lib/pele_platform/Examples/restart
2021-09-03T17:50:11,000   creating build/lib/pele_platform/Examples/singularity
2021-09-03T17:50:11,002   copying pele_platform/Examples/singularity/input_adaptive.yaml -> build/lib/pele_platform/Examples/singularity
2021-09-03T17:50:11,009   copying pele_platform/Examples/singularity/input_frag.yaml -> build/lib/pele_platform/Examples/singularity
2021-09-03T17:50:11,015   creating build/lib/pele_platform/Examples/site_finder
2021-09-03T17:50:11,018   copying pele_platform/Examples/site_finder/complex.pdb -> build/lib/pele_platform/Examples/site_finder
2021-09-03T17:50:11,067   copying pele_platform/Examples/site_finder/global.yaml -> build/lib/pele_platform/Examples/site_finder
2021-09-03T17:50:11,071   copying pele_platform/Examples/site_finder/input_folder.yaml -> build/lib/pele_platform/Examples/site_finder
2021-09-03T17:50:11,076   copying pele_platform/Examples/site_finder/input_global.yaml -> build/lib/pele_platform/Examples/site_finder
2021-09-03T17:50:11,081   copying pele_platform/Examples/site_finder/input_global_xtc.yaml -> build/lib/pele_platform/Examples/site_finder
2021-09-03T17:50:11,086   copying pele_platform/Examples/site_finder/input_restart.yaml -> build/lib/pele_platform/Examples/site_finder
2021-09-03T17:50:11,092   copying pele_platform/Examples/site_finder/input_skipref.yaml -> build/lib/pele_platform/Examples/site_finder
2021-09-03T17:50:11,099   copying pele_platform/Examples/site_finder/local.yaml -> build/lib/pele_platform/Examples/site_finder
2021-09-03T17:50:11,105   creating build/lib/pele_platform/Examples/tutorials
2021-09-03T17:50:11,107   creating build/lib/pele_platform/Examples/tutorials/gpcr
2021-09-03T17:50:11,109   copying pele_platform/Examples/tutorials/gpcr/complex.pdb -> build/lib/pele_platform/Examples/tutorials/gpcr
2021-09-03T17:50:11,150   copying pele_platform/Examples/tutorials/gpcr/input.yaml -> build/lib/pele_platform/Examples/tutorials/gpcr
2021-09-03T17:50:11,155   creating build/lib/pele_platform/Examples/tutorials/induced_fit
2021-09-03T17:50:11,157   copying pele_platform/Examples/tutorials/induced_fit/docking.pdb -> build/lib/pele_platform/Examples/tutorials/induced_fit
2021-09-03T17:50:11,222   copying pele_platform/Examples/tutorials/induced_fit/input.yaml -> build/lib/pele_platform/Examples/tutorials/induced_fit
2021-09-03T17:50:11,228   creating build/lib/pele_platform/Examples/tutorials/ppi
2021-09-03T17:50:11,231   copying pele_platform/Examples/tutorials/ppi/4yy6_ligand.pdb -> build/lib/pele_platform/Examples/tutorials/ppi
2021-09-03T17:50:11,239   copying pele_platform/Examples/tutorials/ppi/4yy6_prep.pdb -> build/lib/pele_platform/Examples/tutorials/ppi
2021-09-03T17:50:11,266   copying pele_platform/Examples/tutorials/ppi/input.yaml -> build/lib/pele_platform/Examples/tutorials/ppi
2021-09-03T17:50:11,273   creating build/lib/pele_platform/Examples/water
2021-09-03T17:50:11,276   copying pele_platform/Examples/water/complex_induced.pdb -> build/lib/pele_platform/Examples/water
2021-09-03T17:50:11,296   copying pele_platform/Examples/water/complex_ref_LESSH2O.pdb -> build/lib/pele_platform/Examples/water
2021-09-03T17:50:11,341   copying pele_platform/Examples/water/input_all.yaml -> build/lib/pele_platform/Examples/water
2021-09-03T17:50:11,346   copying pele_platform/Examples/water/input_bs.yaml -> build/lib/pele_platform/Examples/water
2021-09-03T17:50:11,351   copying pele_platform/Examples/water/input_bs_defaults.yaml -> build/lib/pele_platform/Examples/water
2021-09-03T17:50:11,358   copying pele_platform/Examples/water/input_induced.yaml -> build/lib/pele_platform/Examples/water
2021-09-03T17:50:11,364   copying pele_platform/Examples/water/input_lig.yaml -> build/lib/pele_platform/Examples/water
2021-09-03T17:50:11,371   copying pele_platform/Examples/water/input_lig_defaults.yaml -> build/lib/pele_platform/Examples/water
2021-09-03T17:50:11,378   copying pele_platform/Examples/water/input_nwaters.yaml -> build/lib/pele_platform/Examples/water
2021-09-03T17:50:11,384   copying pele_platform/Examples/water/input_previous_water.yaml -> build/lib/pele_platform/Examples/water
2021-09-03T17:50:11,391   copying pele_platform/Examples/water/water2_pele.conf -> build/lib/pele_platform/Examples/water
2021-09-03T17:50:11,396   copying pele_platform/Examples/water/water_pele.conf -> build/lib/pele_platform/Examples/water
2021-09-03T17:50:11,401   copying pele_platform/Examples/water/water_processed.pdb -> build/lib/pele_platform/Examples/water
2021-09-03T17:50:11,450   creating build/lib/pele_platform/Templates
2021-09-03T17:50:11,453   copying pele_platform/Templates/pele_template.conf -> build/lib/pele_platform/Templates
2021-09-03T17:50:11,461   copying pele_platform/Templates/solventParamsHCTOBC.txt -> build/lib/pele_platform/Templates
2021-09-03T17:50:11,474   copying pele_platform/Templates/template_adaptive.conf -> build/lib/pele_platform/Templates
2021-09-03T17:50:11,524   UPDATING build/lib/pele_platform/_version.py
2021-09-03T17:50:11,527   set build/lib/pele_platform/_version.py to '1.6.0'
2021-09-03T17:50:11,533   installing to build/bdist.linux-armv7l/wheel
2021-09-03T17:50:11,534   running install
2021-09-03T17:50:11,536   running install_lib
2021-09-03T17:50:11,544   creating build/bdist.linux-armv7l
2021-09-03T17:50:11,545   creating build/bdist.linux-armv7l/wheel
2021-09-03T17:50:11,549   creating build/bdist.linux-armv7l/wheel/pele_platform
2021-09-03T17:50:11,552   creating build/bdist.linux-armv7l/wheel/pele_platform/features
2021-09-03T17:50:11,554   copying build/lib/pele_platform/features/adaptive.py -> build/bdist.linux-armv7l/wheel/pele_platform/features
2021-09-03T17:50:11,560   copying build/lib/pele_platform/features/__init__.py -> build/bdist.linux-armv7l/wheel/pele_platform/features
2021-09-03T17:50:11,563   copying build/lib/pele_platform/features/frag.py -> build/bdist.linux-armv7l/wheel/pele_platform/features
2021-09-03T17:50:11,568   creating build/bdist.linux-armv7l/wheel/pele_platform/out_in
2021-09-03T17:50:11,570   copying build/lib/pele_platform/out_in/main.py -> build/bdist.linux-armv7l/wheel/pele_platform/out_in
2021-09-03T17:50:11,574   copying build/lib/pele_platform/out_in/__init__.py -> build/bdist.linux-armv7l/wheel/pele_platform/out_in
2021-09-03T17:50:11,580   creating build/bdist.linux-armv7l/wheel/pele_platform/Errors
2021-09-03T17:50:11,583   copying build/lib/pele_platform/Errors/custom_errors.py -> build/bdist.linux-armv7l/wheel/pele_platform/Errors
2021-09-03T17:50:11,589   copying build/lib/pele_platform/Errors/__init__.py -> build/bdist.linux-armv7l/wheel/pele_platform/Errors
2021-09-03T17:50:11,593   copying build/lib/pele_platform/_version.py -> build/bdist.linux-armv7l/wheel/pele_platform
2021-09-03T17:50:11,600   creating build/bdist.linux-armv7l/wheel/pele_platform/analysis
2021-09-03T17:50:11,603   copying build/lib/pele_platform/analysis/data.py -> build/bdist.linux-armv7l/wheel/pele_platform/analysis
2021-09-03T17:50:11,613   copying build/lib/pele_platform/analysis/plot.py -> build/bdist.linux-armv7l/wheel/pele_platform/analysis
2021-09-03T17:50:11,620   copying build/lib/pele_platform/analysis/__init__.py -> build/bdist.linux-armv7l/wheel/pele_platform/analysis
2021-09-03T17:50:11,626   copying build/lib/pele_platform/analysis/pdf_report.py -> build/bdist.linux-armv7l/wheel/pele_platform/analysis
2021-09-03T17:50:11,631   copying build/lib/pele_platform/analysis/analysis.py -> build/bdist.linux-armv7l/wheel/pele_platform/analysis
2021-09-03T17:50:11,644   copying build/lib/pele_platform/analysis/clustering.py -> build/bdist.linux-armv7l/wheel/pele_platform/analysis
2021-09-03T17:50:11,652   copying build/lib/pele_platform/analysis/interactive_plot.py -> build/bdist.linux-armv7l/wheel/pele_platform/analysis
2021-09-03T17:50:11,660   copying build/lib/pele_platform/main.py -> build/bdist.linux-armv7l/wheel/pele_platform
2021-09-03T17:50:11,667   creating build/bdist.linux-armv7l/wheel/pele_platform/enzyme_engineering
2021-09-03T17:50:11,669   copying build/lib/pele_platform/enzyme_engineering/saturated_mutagenesis.py -> build/bdist.linux-armv7l/wheel/pele_platform/enzyme_engineering
2021-09-03T17:50:11,676   copying build/lib/pele_platform/enzyme_engineering/__init__.py -> build/bdist.linux-armv7l/wheel/pele_platform/enzyme_engineering
2021-09-03T17:50:11,681   copying build/lib/pele_platform/plotter.py -> build/bdist.linux-armv7l/wheel/pele_platform
2021-09-03T17:50:11,692   copying build/lib/pele_platform/__init__.py -> build/bdist.linux-armv7l/wheel/pele_platform
2021-09-03T17:50:11,698   creating build/bdist.linux-armv7l/wheel/pele_platform/Templates
2021-09-03T17:50:11,700   copying build/lib/pele_platform/Templates/template_adaptive.conf -> build/bdist.linux-armv7l/wheel/pele_platform/Templates
2021-09-03T17:50:11,704   copying build/lib/pele_platform/Templates/solventParamsHCTOBC.txt -> build/bdist.linux-armv7l/wheel/pele_platform/Templates
2021-09-03T17:50:11,715   copying build/lib/pele_platform/Templates/pele_template.conf -> build/bdist.linux-armv7l/wheel/pele_platform/Templates
2021-09-03T17:50:11,722   creating build/bdist.linux-armv7l/wheel/pele_platform/Utilities
2021-09-03T17:50:11,726   creating build/bdist.linux-armv7l/wheel/pele_platform/Utilities/Helpers
2021-09-03T17:50:11,729   copying build/lib/pele_platform/Utilities/Helpers/bestStructs.py -> build/bdist.linux-armv7l/wheel/pele_platform/Utilities/Helpers
2021-09-03T17:50:11,736   copying build/lib/pele_platform/Utilities/Helpers/map_atoms.py -> build/bdist.linux-armv7l/wheel/pele_platform/Utilities/Helpers
2021-09-03T17:50:11,741   copying build/lib/pele_platform/Utilities/Helpers/launcher.py -> build/bdist.linux-armv7l/wheel/pele_platform/Utilities/Helpers
2021-09-03T17:50:11,746   copying build/lib/pele_platform/Utilities/Helpers/solventOBCParamsGenerator.py -> build/bdist.linux-armv7l/wheel/pele_platform/Utilities/Helpers
2021-09-03T17:50:11,751   copying build/lib/pele_platform/Utilities/Helpers/protein_wizard.py -> build/bdist.linux-armv7l/wheel/pele_platform/Utilities/Helpers
2021-09-03T17:50:11,755   copying build/lib/pele_platform/Utilities/Helpers/yaml_parser.py -> build/bdist.linux-armv7l/wheel/pele_platform/Utilities/Helpers
2021-09-03T17:50:11,763   copying build/lib/pele_platform/Utilities/Helpers/interaction_constraints.py -> build/bdist.linux-armv7l/wheel/pele_platform/Utilities/Helpers
2021-09-03T17:50:11,768   copying build/lib/pele_platform/Utilities/Helpers/plop_launcher.py -> build/bdist.linux-armv7l/wheel/pele_platform/Utilities/Helpers
2021-09-03T17:50:11,774   copying build/lib/pele_platform/Utilities/Helpers/center_of_mass.py -> build/bdist.linux-armv7l/wheel/pele_platform/Utilities/Helpers
2021-09-03T17:50:11,780   copying build/lib/pele_platform/Utilities/Helpers/randomize.py -> build/bdist.linux-armv7l/wheel/pele_platform/Utilities/Helpers
2021-09-03T17:50:11,787   copying build/lib/pele_platform/Utilities/Helpers/simulation.py -> build/bdist.linux-armv7l/wheel/pele_platform/Utilities/Helpers
2021-09-03T17:50:11,794   copying build/lib/pele_platform/Utilities/Helpers/helpers.py -> build/bdist.linux-armv7l/wheel/pele_platform/Utilities/Helpers
2021-09-03T17:50:11,801   copying build/lib/pele_platform/Utilities/Helpers/__init__.py -> build/bdist.linux-armv7l/wheel/pele_platform/Utilities/Helpers
2021-09-03T17:50:11,807   copying build/lib/pele_platform/Utilities/Helpers/water.py -> build/bdist.linux-armv7l/wheel/pele_platform/Utilities/Helpers
2021-09-03T17:50:11,814   copying build/lib/pele_platform/Utilities/Helpers/system_prep.py -> build/bdist.linux-armv7l/wheel/pele_platform/Utilities/Helpers
2021-09-03T17:50:11,821   copying build/lib/pele_platform/Utilities/Helpers/missing_residues.py -> build/bdist.linux-armv7l/wheel/pele_platform/Utilities/Helpers
2021-09-03T17:50:11,826   copying build/lib/pele_platform/Utilities/Helpers/calculatePCA4PELE.py -> build/bdist.linux-armv7l/wheel/pele_platform/Utilities/Helpers
2021-09-03T17:50:11,835   copying build/lib/pele_platform/Utilities/Helpers/ligand_conformations.py -> build/bdist.linux-armv7l/wheel/pele_platform/Utilities/Helpers
2021-09-03T17:50:11,840   copying build/lib/pele_platform/Utilities/Helpers/conda_deployment.py -> build/bdist.linux-armv7l/wheel/pele_platform/Utilities/Helpers
2021-09-03T17:50:11,847   creating build/bdist.linux-armv7l/wheel/pele_platform/Utilities/Helpers/constraints
2021-09-03T17:50:11,850   copying build/lib/pele_platform/Utilities/Helpers/constraints/alpha_constraints.py -> build/bdist.linux-armv7l/wheel/pele_platform/Utilities/Helpers/constraints
2021-09-03T17:50:11,857   copying build/lib/pele_platform/Utilities/Helpers/constraints/__init__.py -> build/bdist.linux-armv7l/wheel/pele_platform/Utilities/Helpers/constraints
2021-09-03T17:50:11,862   copying build/lib/pele_platform/Utilities/Helpers/constraints/smiles_constraints.py -> build/bdist.linux-armv7l/wheel/pele_platform/Utilities/Helpers/constraints
2021-09-03T17:50:11,870   creating build/bdist.linux-armv7l/wheel/pele_platform/Utilities/Helpers/Metals
2021-09-03T17:50:11,872   copying build/lib/pele_platform/Utilities/Helpers/Metals/metal_constraints.py -> build/bdist.linux-armv7l/wheel/pele_platform/Utilities/Helpers/Metals
2021-09-03T17:50:11,880   copying build/lib/pele_platform/Utilities/Helpers/Metals/__init__.py -> build/bdist.linux-armv7l/wheel/pele_platform/Utilities/Helpers/Metals
2021-09-03T17:50:11,883   copying build/lib/pele_platform/Utilities/Helpers/Metals/metal_polarisation.py -> build/bdist.linux-armv7l/wheel/pele_platform/Utilities/Helpers/Metals
2021-09-03T17:50:11,887   copying build/lib/pele_platform/Utilities/Helpers/template_builder.py -> build/bdist.linux-armv7l/wheel/pele_platform/Utilities/Helpers
2021-09-03T17:50:11,891   copying build/lib/pele_platform/Utilities/__init__.py -> build/bdist.linux-armv7l/wheel/pele_platform/Utilities
2021-09-03T17:50:11,896   creating build/bdist.linux-armv7l/wheel/pele_platform/Utilities/Parameters
2021-09-03T17:50:11,899   creating build/bdist.linux-armv7l/wheel/pele_platform/Utilities/Parameters/SimulationFolders
2021-09-03T17:50:11,901   copying build/lib/pele_platform/Utilities/Parameters/SimulationFolders/__init__.py -> build/bdist.linux-armv7l/wheel/pele_platform/Utilities/Parameters/SimulationFolders
2021-09-03T17:50:11,906   copying build/lib/pele_platform/Utilities/Parameters/SimulationFolders/simulation_folders.py -> build/bdist.linux-armv7l/wheel/pele_platform/Utilities/Parameters/SimulationFolders
2021-09-03T17:50:11,912   copying build/lib/pele_platform/Utilities/Parameters/__init__.py -> build/bdist.linux-armv7l/wheel/pele_platform/Utilities/Parameters
2021-09-03T17:50:11,919   creating build/bdist.linux-armv7l/wheel/pele_platform/Utilities/Parameters/SimulationParams
2021-09-03T17:50:11,921   copying build/lib/pele_platform/Utilities/Parameters/SimulationParams/simulation_params.py -> build/bdist.linux-armv7l/wheel/pele_platform/Utilities/Parameters/SimulationParams
2021-09-03T17:50:11,929   creating build/bdist.linux-armv7l/wheel/pele_platform/Utilities/Parameters/SimulationParams/GlideParams
2021-09-03T17:50:11,931   copying build/lib/pele_platform/Utilities/Parameters/SimulationParams/GlideParams/glide_params.py -> build/bdist.linux-armv7l/wheel/pele_platform/Utilities/Parameters/SimulationParams/GlideParams
2021-09-03T17:50:11,936   copying build/lib/pele_platform/Utilities/Parameters/SimulationParams/GlideParams/__init__.py -> build/bdist.linux-armv7l/wheel/pele_platform/Utilities/Parameters/SimulationParams/GlideParams
2021-09-03T17:50:11,940   creating build/bdist.linux-armv7l/wheel/pele_platform/Utilities/Parameters/SimulationParams/MSMParams
2021-09-03T17:50:11,942   copying build/lib/pele_platform/Utilities/Parameters/SimulationParams/MSMParams/msm_params.py -> build/bdist.linux-armv7l/wheel/pele_platform/Utilities/Parameters/SimulationParams/MSMParams
2021-09-03T17:50:11,948   copying build/lib/pele_platform/Utilities/Parameters/SimulationParams/MSMParams/__init__.py -> build/bdist.linux-armv7l/wheel/pele_platform/Utilities/Parameters/SimulationParams/MSMParams
2021-09-03T17:50:11,954   creating build/bdist.linux-armv7l/wheel/pele_platform/Utilities/Parameters/SimulationParams/PCA
2021-09-03T17:50:11,957   copying build/lib/pele_platform/Utilities/Parameters/SimulationParams/PCA/__init__.py -> build/bdist.linux-armv7l/wheel/pele_platform/Utilities/Parameters/SimulationParams/PCA
2021-09-03T17:50:11,961   copying build/lib/pele_platform/Utilities/Parameters/SimulationParams/PCA/pca.py -> build/bdist.linux-armv7l/wheel/pele_platform/Utilities/Parameters/SimulationParams/PCA
2021-09-03T17:50:11,966   copying build/lib/pele_platform/Utilities/Parameters/SimulationParams/__init__.py -> build/bdist.linux-armv7l/wheel/pele_platform/Utilities/Parameters/SimulationParams
2021-09-03T17:50:11,970   creating build/bdist.linux-armv7l/wheel/pele_platform/Utilities/Parameters/SimulationParams/InOutParams
2021-09-03T17:50:11,972   copying build/lib/pele_platform/Utilities/Parameters/SimulationParams/InOutParams/__init__.py -> build/bdist.linux-armv7l/wheel/pele_platform/Utilities/Parameters/SimulationParams/InOutParams
2021-09-03T17:50:11,976   copying build/lib/pele_platform/Utilities/Parameters/SimulationParams/InOutParams/inout_params.py -> build/bdist.linux-armv7l/wheel/pele_platform/Utilities/Parameters/SimulationParams/InOutParams
2021-09-03T17:50:11,981   creating build/bdist.linux-armv7l/wheel/pele_platform/Utilities/Parameters/SimulationParams/BiasParams
2021-09-03T17:50:11,984   copying build/lib/pele_platform/Utilities/Parameters/SimulationParams/BiasParams/__init__.py -> build/bdist.linux-armv7l/wheel/pele_platform/Utilities/Parameters/SimulationParams/BiasParams
2021-09-03T17:50:11,989   copying build/lib/pele_platform/Utilities/Parameters/SimulationParams/BiasParams/bias_params.py -> build/bdist.linux-armv7l/wheel/pele_platform/Utilities/Parameters/SimulationParams/BiasParams
2021-09-03T17:50:11,996   creating build/bdist.linux-armv7l/wheel/pele_platform/Utilities/Parameters/SimulationParams/site_finder
2021-09-03T17:50:11,998   copying build/lib/pele_platform/Utilities/Parameters/SimulationParams/site_finder/site_finder.py -> build/bdist.linux-armv7l/wheel/pele_platform/Utilities/Parameters/SimulationParams/site_finder
2021-09-03T17:50:12,004   copying build/lib/pele_platform/Utilities/Parameters/SimulationParams/site_finder/__init__.py -> build/bdist.linux-armv7l/wheel/pele_platform/Utilities/Parameters/SimulationParams/site_finder
2021-09-03T17:50:12,008   creating build/bdist.linux-armv7l/wheel/pele_platform/Utilities/Parameters/SimulationParams/PPI
2021-09-03T17:50:12,010   copying build/lib/pele_platform/Utilities/Parameters/SimulationParams/PPI/__init__.py -> build/bdist.linux-armv7l/wheel/pele_platform/Utilities/Parameters/SimulationParams/PPI
2021-09-03T17:50:12,014   copying build/lib/pele_platform/Utilities/Parameters/SimulationParams/PPI/ppi.py -> build/bdist.linux-armv7l/wheel/pele_platform/Utilities/Parameters/SimulationParams/PPI
2021-09-03T17:50:12,018   copying build/lib/pele_platform/Utilities/Parameters/parameters.py -> build/bdist.linux-armv7l/wheel/pele_platform/Utilities/Parameters
2021-09-03T17:50:12,026   creating build/bdist.linux-armv7l/wheel/pele_platform/constants
2021-09-03T17:50:12,029   copying build/lib/pele_platform/constants/constants.py -> build/bdist.linux-armv7l/wheel/pele_platform/constants
2021-09-03T17:50:12,036   copying build/lib/pele_platform/constants/__init__.py -> build/bdist.linux-armv7l/wheel/pele_platform/constants
2021-09-03T17:50:12,041   copying build/lib/pele_platform/constants/pele_params.py -> build/bdist.linux-armv7l/wheel/pele_platform/constants
2021-09-03T17:50:12,048   creating build/bdist.linux-armv7l/wheel/pele_platform/Checker
2021-09-03T17:50:12,050   copying build/lib/pele_platform/Checker/valid_flags.py -> build/bdist.linux-armv7l/wheel/pele_platform/Checker
2021-09-03T17:50:12,055   copying build/lib/pele_platform/Checker/main.py -> build/bdist.linux-armv7l/wheel/pele_platform/Checker
2021-09-03T17:50:12,060   copying build/lib/pele_platform/Checker/pdb_checker.py -> build/bdist.linux-armv7l/wheel/pele_platform/Checker
2021-09-03T17:50:12,065   copying build/lib/pele_platform/Checker/__init__.py -> build/bdist.linux-armv7l/wheel/pele_platform/Checker
2021-09-03T17:50:12,069   copying build/lib/pele_platform/Checker/python_version.py -> build/bdist.linux-armv7l/wheel/pele_platform/Checker
2021-09-03T17:50:12,075   copying build/lib/pele_platform/Checker/environment_variables.py -> build/bdist.linux-armv7l/wheel/pele_platform/Checker
2021-09-03T17:50:12,080   copying build/lib/pele_platform/Checker/executable.py -> build/bdist.linux-armv7l/wheel/pele_platform/Checker
2021-09-03T17:50:12,086   creating build/bdist.linux-armv7l/wheel/pele_platform/Frag
2021-09-03T17:50:12,088   copying build/lib/pele_platform/Frag/atoms.py -> build/bdist.linux-armv7l/wheel/pele_platform/Frag
2021-09-03T17:50:12,092   copying build/lib/pele_platform/Frag/checker.py -> build/bdist.linux-armv7l/wheel/pele_platform/Frag
2021-09-03T17:50:12,096   copying build/lib/pele_platform/Frag/simulation.py -> build/bdist.linux-armv7l/wheel/pele_platform/Frag
2021-09-03T17:50:12,101   copying build/lib/pele_platform/Frag/fragments.py -> build/bdist.linux-armv7l/wheel/pele_platform/Frag
2021-09-03T17:50:12,107   copying build/lib/pele_platform/Frag/helpers.py -> build/bdist.linux-armv7l/wheel/pele_platform/Frag
2021-09-03T17:50:12,115   creating build/bdist.linux-armv7l/wheel/pele_platform/Frag/parameters
2021-09-03T17:50:12,118   copying build/lib/pele_platform/Frag/parameters/simulation.py -> build/bdist.linux-armv7l/wheel/pele_platform/Frag/parameters
2021-09-03T17:50:12,124   copying build/lib/pele_platform/Frag/parameters/optional.py -> build/bdist.linux-armv7l/wheel/pele_platform/Frag/parameters
2021-09-03T17:50:12,128   copying build/lib/pele_platform/Frag/parameters/__init__.py -> build/bdist.linux-armv7l/wheel/pele_platform/Frag/parameters
2021-09-03T17:50:12,132   copying build/lib/pele_platform/Frag/parameters/water.py -> build/bdist.linux-armv7l/wheel/pele_platform/Frag/parameters
2021-09-03T17:50:12,136   copying build/lib/pele_platform/Frag/parameters/metrics.py -> build/bdist.linux-armv7l/wheel/pele_platform/Frag/parameters
2021-09-03T17:50:12,140   copying build/lib/pele_platform/Frag/parameters/files.py -> build/bdist.linux-armv7l/wheel/pele_platform/Frag/parameters
2021-09-03T17:50:12,144   copying build/lib/pele_platform/Frag/__init__.py -> build/bdist.linux-armv7l/wheel/pele_platform/Frag
2021-09-03T17:50:12,149   copying build/lib/pele_platform/Frag/analysis.py -> build/bdist.linux-armv7l/wheel/pele_platform/Frag
2021-09-03T17:50:12,155   copying build/lib/pele_platform/Frag/generative_model.py -> build/bdist.linux-armv7l/wheel/pele_platform/Frag
2021-09-03T17:50:12,160   copying build/lib/pele_platform/Frag/libraries.py -> build/bdist.linux-armv7l/wheel/pele_platform/Frag
2021-09-03T17:50:12,167   creating build/bdist.linux-armv7l/wheel/pele_platform/RNA
2021-09-03T17:50:12,169   copying build/lib/pele_platform/RNA/__init__.py -> build/bdist.linux-armv7l/wheel/pele_platform/RNA
2021-09-03T17:50:12,173   copying build/lib/pele_platform/RNA/prep.py -> build/bdist.linux-armv7l/wheel/pele_platform/RNA
2021-09-03T17:50:12,179   creating build/bdist.linux-armv7l/wheel/pele_platform/Examples
2021-09-03T17:50:12,182   creating build/bdist.linux-armv7l/wheel/pele_platform/Examples/production
2021-09-03T17:50:12,184   copying build/lib/pele_platform/Examples/production/input.sl -> build/bdist.linux-armv7l/wheel/pele_platform/Examples/production
2021-09-03T17:50:12,190   copying build/lib/pele_platform/Examples/production/input_mae.yaml -> build/bdist.linux-armv7l/wheel/pele_platform/Examples/production
2021-09-03T17:50:12,197   creating build/bdist.linux-armv7l/wheel/pele_platform/Examples/bias
2021-09-03T17:50:12,200   copying build/lib/pele_platform/Examples/bias/complex.pdb -> build/bdist.linux-armv7l/wheel/pele_platform/Examples/bias
2021-09-03T17:50:12,238   copying build/lib/pele_platform/Examples/bias/input_defaults.yaml -> build/bdist.linux-armv7l/wheel/pele_platform/Examples/bias
2021-09-03T17:50:12,245   creating build/bdist.linux-armv7l/wheel/pele_platform/Examples/out_in
2021-09-03T17:50:12,247   copying build/lib/pele_platform/Examples/out_in/input.yaml -> build/bdist.linux-armv7l/wheel/pele_platform/Examples/out_in
2021-09-03T17:50:12,253   copying build/lib/pele_platform/Examples/out_in/input_flag_error.yaml -> build/bdist.linux-armv7l/wheel/pele_platform/Examples/out_in
2021-09-03T17:50:12,258   copying build/lib/pele_platform/Examples/out_in/input_default.yaml -> build/bdist.linux-armv7l/wheel/pele_platform/Examples/out_in
2021-09-03T17:50:12,263   copying build/lib/pele_platform/Examples/out_in/input_metrics.yaml -> build/bdist.linux-armv7l/wheel/pele_platform/Examples/out_in
2021-09-03T17:50:12,268   copying build/lib/pele_platform/Examples/out_in/1_3ZON_complex.pdb -> build/bdist.linux-armv7l/wheel/pele_platform/Examples/out_in
2021-09-03T17:50:12,306   copying build/lib/pele_platform/Examples/out_in/input_box_center.yaml -> build/bdist.linux-armv7l/wheel/pele_platform/Examples/out_in
2021-09-03T17:50:12,311   creating build/bdist.linux-armv7l/wheel/pele_platform/Examples/restart
2021-09-03T17:50:12,313   copying build/lib/pele_platform/Examples/restart/restart.yaml -> build/bdist.linux-armv7l/wheel/pele_platform/Examples/restart
2021-09-03T17:50:12,318   creating build/bdist.linux-armv7l/wheel/pele_platform/Examples/clustering
2021-09-03T17:50:12,321   creating build/bdist.linux-armv7l/wheel/pele_platform/Examples/clustering/0
2021-09-03T17:50:12,324   copying build/lib/pele_platform/Examples/clustering/0/trajectory_4.pdb -> build/bdist.linux-armv7l/wheel/pele_platform/Examples/clustering/0
2021-09-03T17:50:12,391   copying build/lib/pele_platform/Examples/clustering/0/report_2 -> build/bdist.linux-armv7l/wheel/pele_platform/Examples/clustering/0
2021-09-03T17:50:12,396   copying build/lib/pele_platform/Examples/clustering/0/trajectory_3.pdb -> build/bdist.linux-armv7l/wheel/pele_platform/Examples/clustering/0
2021-09-03T17:50:12,468   creating build/bdist.linux-armv7l/wheel/pele_platform/Examples/clustering/0/clustering
2021-09-03T17:50:12,471   copying build/lib/pele_platform/Examples/clustering/0/clustering/object.pkl -> build/bdist.linux-armv7l/wheel/pele_platform/Examples/clustering/0/clustering
2021-09-03T17:50:12,701   copying build/lib/pele_platform/Examples/clustering/0/clustering/summary.txt -> build/bdist.linux-armv7l/wheel/pele_platform/Examples/clustering/0/clustering
2021-09-03T17:50:12,705   copying build/lib/pele_platform/Examples/clustering/0/topologyMapping.txt -> build/bdist.linux-armv7l/wheel/pele_platform/Examples/clustering/0
2021-09-03T17:50:12,709   copying build/lib/pele_platform/Examples/clustering/0/trajectory_2.pdb -> build/bdist.linux-armv7l/wheel/pele_platform/Examples/clustering/0
2021-09-03T17:50:12,745   copying build/lib/pele_platform/Examples/clustering/0/report_1 -> build/bdist.linux-armv7l/wheel/pele_platform/Examples/clustering/0
2021-09-03T17:50:12,751   copying build/lib/pele_platform/Examples/clustering/0/report_3 -> build/bdist.linux-armv7l/wheel/pele_platform/Examples/clustering/0
2021-09-03T17:50:12,756   copying build/lib/pele_platform/Examples/clustering/0/report_4 -> build/bdist.linux-armv7l/wheel/pele_platform/Examples/clustering/0
2021-09-03T17:50:12,761   copying build/lib/pele_platform/Examples/clustering/0/trajectory_1.pdb -> build/bdist.linux-armv7l/wheel/pele_platform/Examples/clustering/0
2021-09-03T17:50:12,831   copying build/lib/pele_platform/Examples/clustering/summary.csv -> build/bdist.linux-armv7l/wheel/pele_platform/Examples/clustering
2021-09-03T17:50:12,836   copying build/lib/pele_platform/Examples/test.sl -> build/bdist.linux-armv7l/wheel/pele_platform/Examples
2021-09-03T17:50:12,843   creating build/bdist.linux-armv7l/wheel/pele_platform/Examples/exit_soft
2021-09-03T17:50:12,846   copying build/lib/pele_platform/Examples/exit_soft/input.yaml -> build/bdist.linux-armv7l/wheel/pele_platform/Examples/exit_soft
2021-09-03T17:50:12,851   copying build/lib/pele_platform/Examples/exit_soft/input_defaults.yaml -> build/bdist.linux-armv7l/wheel/pele_platform/Examples/exit_soft
2021-09-03T17:50:12,858   creating build/bdist.linux-armv7l/wheel/pele_platform/Examples/clustering_xtc
2021-09-03T17:50:12,860   copying build/lib/pele_platform/Examples/clustering_xtc/water_clustering.yaml -> build/bdist.linux-armv7l/wheel/pele_platform/Examples/clustering_xtc
2021-09-03T17:50:12,868   creating build/bdist.linux-armv7l/wheel/pele_platform/Examples/clustering_xtc/0
2021-09-03T17:50:12,870   copying build/lib/pele_platform/Examples/clustering_xtc/0/trajectory_1.xtc -> build/bdist.linux-armv7l/wheel/pele_platform/Examples/clustering_xtc/0
2021-09-03T17:50:12,880   copying build/lib/pele_platform/Examples/clustering_xtc/0/report_2 -> build/bdist.linux-armv7l/wheel/pele_platform/Examples/clustering_xtc/0
2021-09-03T17:50:12,885   copying build/lib/pele_platform/Examples/clustering_xtc/0/topology.pdb -> build/bdist.linux-armv7l/wheel/pele_platform/Examples/clustering_xtc/0
2021-09-03T17:50:12,923   copying build/lib/pele_platform/Examples/clustering_xtc/0/trajectory_2.xtc -> build/bdist.linux-armv7l/wheel/pele_platform/Examples/clustering_xtc/0
2021-09-03T17:50:12,930   copying build/lib/pele_platform/Examples/clustering_xtc/0/trajectory_4.xtc -> build/bdist.linux-armv7l/wheel/pele_platform/Examples/clustering_xtc/0
2021-09-03T17:50:12,939   copying build/lib/pele_platform/Examples/clustering_xtc/0/report_1 -> build/bdist.linux-armv7l/wheel/pele_platform/Examples/clustering_xtc/0
2021-09-03T17:50:12,944   copying build/lib/pele_platform/Examples/clustering_xtc/0/trajectory_3.xtc -> build/bdist.linux-armv7l/wheel/pele_platform/Examples/clustering_xtc/0
2021-09-03T17:50:12,954   copying build/lib/pele_platform/Examples/clustering_xtc/0/report_3 -> build/bdist.linux-armv7l/wheel/pele_platform/Examples/clustering_xtc/0
2021-09-03T17:50:12,959   copying build/lib/pele_platform/Examples/clustering_xtc/0/report_4 -> build/bdist.linux-armv7l/wheel/pele_platform/Examples/clustering_xtc/0
2021-09-03T17:50:12,966   creating build/bdist.linux-armv7l/wheel/pele_platform/Examples/minimum_steps
2021-09-03T17:50:12,968   copying build/lib/pele_platform/Examples/minimum_steps/input.yaml -> build/bdist.linux-armv7l/wheel/pele_platform/Examples/minimum_steps
2021-09-03T17:50:12,974   copying build/lib/pele_platform/Examples/minimum_steps/complex.pdb -> build/bdist.linux-armv7l/wheel/pele_platform/Examples/minimum_steps
2021-09-03T17:50:13,042   creating build/bdist.linux-armv7l/wheel/pele_platform/Examples/inputs
2021-09-03T17:50:13,045   copying build/lib/pele_platform/Examples/inputs/input.yaml -> build/bdist.linux-armv7l/wheel/pele_platform/Examples/inputs
2021-09-03T17:50:13,050   copying build/lib/pele_platform/Examples/inputs/mn4.sl -> build/bdist.linux-armv7l/wheel/pele_platform/Examples/inputs
2021-09-03T17:50:13,056   copying build/lib/pele_platform/Examples/inputs/nord3.sge -> build/bdist.linux-armv7l/wheel/pele_platform/Examples/inputs
2021-09-03T17:50:13,063   creating build/bdist.linux-armv7l/wheel/pele_platform/Examples/ligand_conformations
2021-09-03T17:50:13,065   copying build/lib/pele_platform/Examples/ligand_conformations/input.yaml -> build/bdist.linux-armv7l/wheel/pele_platform/Examples/ligand_conformations
2021-09-03T17:50:13,071   copying build/lib/pele_platform/Examples/ligand_conformations/2.pdb -> build/bdist.linux-armv7l/wheel/pele_platform/Examples/ligand_conformations
2021-09-03T17:50:13,076   copying build/lib/pele_platform/Examples/ligand_conformations/3.pdb -> build/bdist.linux-armv7l/wheel/pele_platform/Examples/ligand_conformations
2021-09-03T17:50:13,082   copying build/lib/pele_platform/Examples/ligand_conformations/1.pdb -> build/bdist.linux-armv7l/wheel/pele_platform/Examples/ligand_conformations
2021-09-03T17:50:13,089   creating build/bdist.linux-armv7l/wheel/pele_platform/Examples/analysis
2021-09-03T17:50:13,091   copying build/lib/pele_platform/Examples/analysis/input.yaml -> build/bdist.linux-armv7l/wheel/pele_platform/Examples/analysis
2021-09-03T17:50:13,097   copying build/lib/pele_platform/Examples/analysis/input_flags.yaml -> build/bdist.linux-armv7l/wheel/pele_platform/Examples/analysis
2021-09-03T17:50:13,102   copying build/lib/pele_platform/Examples/analysis/input_xtc.yaml -> build/bdist.linux-armv7l/wheel/pele_platform/Examples/analysis
2021-09-03T17:50:13,108   copying build/lib/pele_platform/Examples/analysis/input_flags0.yaml -> build/bdist.linux-armv7l/wheel/pele_platform/Examples/analysis
2021-09-03T17:50:13,115   creating build/bdist.linux-armv7l/wheel/pele_platform/Examples/analysis/data
2021-09-03T17:50:13,117   copying build/lib/pele_platform/Examples/analysis/data/input.yaml -> build/bdist.linux-armv7l/wheel/pele_platform/Examples/analysis/data
2021-09-03T17:50:13,123   copying build/lib/pele_platform/Examples/analysis/data/input_flags.yaml -> build/bdist.linux-armv7l/wheel/pele_platform/Examples/analysis/data
2021-09-03T17:50:13,127   copying build/lib/pele_platform/Examples/analysis/data/MG.rot.assign -> build/bdist.linux-armv7l/wheel/pele_platform/Examples/analysis/data
2021-09-03T17:50:13,131   creating build/bdist.linux-armv7l/wheel/pele_platform/Examples/analysis/data/inputs
2021-09-03T17:50:13,133   copying build/lib/pele_platform/Examples/analysis/data/inputs/input1.pdb -> build/bdist.linux-armv7l/wheel/pele_platform/Examples/analysis/data/inputs
2021-09-03T17:50:13,170   copying build/lib/pele_platform/Examples/analysis/data/inputs/input2.pdb -> build/bdist.linux-armv7l/wheel/pele_platform/Examples/analysis/data/inputs
2021-09-03T17:50:13,206   copying build/lib/pele_platform/Examples/analysis/data/inputs/input3.pdb -> build/bdist.linux-armv7l/wheel/pele_platform/Examples/analysis/data/inputs
2021-09-03T17:50:13,244   copying build/lib/pele_platform/Examples/analysis/data/input_mae.yaml -> build/bdist.linux-armv7l/wheel/pele_platform/Examples/analysis/data
2021-09-03T17:50:13,249   copying build/lib/pele_platform/Examples/analysis/data/STR.rot.assign -> build/bdist.linux-armv7l/wheel/pele_platform/Examples/analysis/data
2021-09-03T17:50:13,254   copying build/lib/pele_platform/Examples/analysis/data/strz -> build/bdist.linux-armv7l/wheel/pele_platform/Examples/analysis/data
2021-09-03T17:50:13,258   copying build/lib/pele_platform/Examples/analysis/data/pele.conf -> build/bdist.linux-armv7l/wheel/pele_platform/Examples/analysis/data
2021-09-03T17:50:13,264   copying build/lib/pele_platform/Examples/analysis/data/adaptive.conf -> build/bdist.linux-armv7l/wheel/pele_platform/Examples/analysis/data
2021-09-03T17:50:13,268   copying build/lib/pele_platform/Examples/analysis/data/input_flags0.yaml -> build/bdist.linux-armv7l/wheel/pele_platform/Examples/analysis/data
2021-09-03T17:50:13,273   creating build/bdist.linux-armv7l/wheel/pele_platform/Examples/analysis/data/xtc
2021-09-03T17:50:13,276   creating build/bdist.linux-armv7l/wheel/pele_platform/Examples/analysis/data/xtc/0
2021-09-03T17:50:13,278   copying build/lib/pele_platform/Examples/analysis/data/xtc/0/trajectory_1.xtc -> build/bdist.linux-armv7l/wheel/pele_platform/Examples/analysis/data/xtc/0
2021-09-03T17:50:13,283   copying build/lib/pele_platform/Examples/analysis/data/xtc/0/report_2 -> build/bdist.linux-armv7l/wheel/pele_platform/Examples/analysis/data/xtc/0
2021-09-03T17:50:13,288   copying build/lib/pele_platform/Examples/analysis/data/xtc/0/trajectory_2.xtc -> build/bdist.linux-armv7l/wheel/pele_platform/Examples/analysis/data/xtc/0
2021-09-03T17:50:13,295   copying build/lib/pele_platform/Examples/analysis/data/xtc/0/report_1 -> build/bdist.linux-armv7l/wheel/pele_platform/Examples/analysis/data/xtc/0
2021-09-03T17:50:13,302   creating build/bdist.linux-armv7l/wheel/pele_platform/Examples/analysis/data/xtc/topologies
2021-09-03T17:50:13,305   copying build/lib/pele_platform/Examples/analysis/data/xtc/topologies/topology_0.pdb -> build/bdist.linux-armv7l/wheel/pele_platform/Examples/analysis/data/xtc/topologies
2021-09-03T17:50:13,321   copying build/lib/pele_platform/Examples/analysis/data/xtc/summary.csv -> build/bdist.linux-armv7l/wheel/pele_platform/Examples/analysis/data/xtc
2021-09-03T17:50:13,327   copying build/lib/pele_platform/Examples/analysis/data/mgz -> build/bdist.linux-armv7l/wheel/pele_platform/Examples/analysis/data
2021-09-03T17:50:13,333   creating build/bdist.linux-armv7l/wheel/pele_platform/Examples/analysis/data/output
2021-09-03T17:50:13,337   creating build/bdist.linux-armv7l/wheel/pele_platform/Examples/analysis/data/output/synchronization
2021-09-03T17:50:13,339   copying build/lib/pele_platform/Examples/analysis/data/output/synchronization/syncFile.lock -> build/bdist.linux-armv7l/wheel/pele_platform/Examples/analysis/data/output/synchronization
2021-09-03T17:50:13,345   copying build/lib/pele_platform/Examples/analysis/data/output/originalControlFile.conf -> build/bdist.linux-armv7l/wheel/pele_platform/Examples/analysis/data/output
2021-09-03T17:50:13,351   creating build/bdist.linux-armv7l/wheel/pele_platform/Examples/analysis/data/output/0
2021-09-03T17:50:13,354   creating build/bdist.linux-armv7l/wheel/pele_platform/Examples/analysis/data/output/0/clustering
2021-09-03T17:50:13,356   copying build/lib/pele_platform/Examples/analysis/data/output/0/clustering/object.pkl -> build/bdist.linux-armv7l/wheel/pele_platform/Examples/analysis/data/output/0/clustering
2021-09-03T17:50:13,392   copying build/lib/pele_platform/Examples/analysis/data/output/0/clustering/summary.txt -> build/bdist.linux-armv7l/wheel/pele_platform/Examples/analysis/data/output/0/clustering
2021-09-03T17:50:13,396   copying build/lib/pele_platform/Examples/analysis/data/output/0/topologyMapping.txt -> build/bdist.linux-armv7l/wheel/pele_platform/Examples/analysis/data/output/0
2021-09-03T17:50:13,400   copying build/lib/pele_platform/Examples/analysis/data/output/0/report_1 -> build/bdist.linux-armv7l/wheel/pele_platform/Examples/analysis/data/output/0
2021-09-03T17:50:13,404   copying build/lib/pele_platform/Examples/analysis/data/output/0/trajectory_1.pdb -> build/bdist.linux-armv7l/wheel/pele_platform/Examples/analysis/data/output/0
2021-09-03T17:50:13,441   creating build/bdist.linux-armv7l/wheel/pele_platform/Examples/analysis/data/output/topologies
2021-09-03T17:50:13,442   copying build/lib/pele_platform/Examples/analysis/data/output/topologies/topology_0.pdb -> build/bdist.linux-armv7l/wheel/pele_platform/Examples/analysis/data/output/topologies
2021-09-03T17:50:13,479   copying build/lib/pele_platform/Examples/analysis/data/output/topologies/topologies.pkl -> build/bdist.linux-armv7l/wheel/pele_platform/Examples/analysis/data/output/topologies
2021-09-03T17:50:13,512   creating build/bdist.linux-armv7l/wheel/pele_platform/Examples/analysis/data/empty_reports_output
2021-09-03T17:50:13,515   creating build/bdist.linux-armv7l/wheel/pele_platform/Examples/analysis/data/empty_reports_output/0
2021-09-03T17:50:13,517   copying build/lib/pele_platform/Examples/analysis/data/empty_reports_output/0/report_2 -> build/bdist.linux-armv7l/wheel/pele_platform/Examples/analysis/data/empty_reports_output/0
2021-09-03T17:50:13,522   copying build/lib/pele_platform/Examples/analysis/data/empty_reports_output/0/topologyMapping.txt -> build/bdist.linux-armv7l/wheel/pele_platform/Examples/analysis/data/empty_reports_output/0
2021-09-03T17:50:13,526   copying build/lib/pele_platform/Examples/analysis/data/empty_reports_output/0/trajectory_2.pdb -> build/bdist.linux-armv7l/wheel/pele_platform/Examples/analysis/data/empty_reports_output/0
2021-09-03T17:50:13,636   copying build/lib/pele_platform/Examples/analysis/data/empty_reports_output/0/report_1 -> build/bdist.linux-armv7l/wheel/pele_platform/Examples/analysis/data/empty_reports_output/0
2021-09-03T17:50:13,641   copying build/lib/pele_platform/Examples/analysis/data/empty_reports_output/0/trajectory_1.pdb -> build/bdist.linux-armv7l/wheel/pele_platform/Examples/analysis/data/empty_reports_output/0
2021-09-03T17:50:13,686   creating build/bdist.linux-armv7l/wheel/pele_platform/Examples/pca
2021-09-03T17:50:13,689   copying build/lib/pele_platform/Examples/pca/input.yaml -> build/bdist.linux-armv7l/wheel/pele_platform/Examples/pca
2021-09-03T17:50:13,695   copying build/lib/pele_platform/Examples/pca/2.pdb -> build/bdist.linux-armv7l/wheel/pele_platform/Examples/pca
2021-09-03T17:50:13,736   copying build/lib/pele_platform/Examples/pca/3.pdb -> build/bdist.linux-armv7l/wheel/pele_platform/Examples/pca
2021-09-03T17:50:13,777   copying build/lib/pele_platform/Examples/pca/1.pdb -> build/bdist.linux-armv7l/wheel/pele_platform/Examples/pca
2021-09-03T17:50:13,819   copying build/lib/pele_platform/Examples/pca/input_str.yaml -> build/bdist.linux-armv7l/wheel/pele_platform/Examples/pca
2021-09-03T17:50:13,826   creating build/bdist.linux-armv7l/wheel/pele_platform/Examples/interaction_restrictions
2021-09-03T17:50:13,830   creating build/bdist.linux-armv7l/wheel/pele_platform/Examples/interaction_restrictions/out
2021-09-03T17:50:13,833   copying build/lib/pele_platform/Examples/interaction_restrictions/out/expected_conditions.txt -> build/bdist.linux-armv7l/wheel/pele_platform/Examples/interaction_restrictions/out
2021-09-03T17:50:13,839   copying build/lib/pele_platform/Examples/interaction_restrictions/out/expected_metrics.txt -> build/bdist.linux-armv7l/wheel/pele_platform/Examples/interaction_restrictions/out
2021-09-03T17:50:13,843   copying build/lib/pele_platform/Examples/interaction_restrictions/input.yaml -> build/bdist.linux-armv7l/wheel/pele_platform/Examples/interaction_restrictions
2021-09-03T17:50:13,847   copying build/lib/pele_platform/Examples/interaction_restrictions/input_error_2.yaml -> build/bdist.linux-armv7l/wheel/pele_platform/Examples/interaction_restrictions
2021-09-03T17:50:13,851   copying build/lib/pele_platform/Examples/interaction_restrictions/complex.pdb -> build/bdist.linux-armv7l/wheel/pele_platform/Examples/interaction_restrictions
2021-09-03T17:50:13,915   copying build/lib/pele_platform/Examples/interaction_restrictions/input_error.yaml -> build/bdist.linux-armv7l/wheel/pele_platform/Examples/interaction_restrictions
2021-09-03T17:50:13,922   creating build/bdist.linux-armv7l/wheel/pele_platform/Examples/tutorials
2021-09-03T17:50:13,926   creating build/bdist.linux-armv7l/wheel/pele_platform/Examples/tutorials/induced_fit
2021-09-03T17:50:13,929   copying build/lib/pele_platform/Examples/tutorials/induced_fit/input.yaml -> build/bdist.linux-armv7l/wheel/pele_platform/Examples/tutorials/induced_fit
2021-09-03T17:50:13,935   copying build/lib/pele_platform/Examples/tutorials/induced_fit/docking.pdb -> build/bdist.linux-armv7l/wheel/pele_platform/Examples/tutorials/induced_fit
2021-09-03T17:50:14,002   creating build/bdist.linux-armv7l/wheel/pele_platform/Examples/tutorials/gpcr
2021-09-03T17:50:14,003   copying build/lib/pele_platform/Examples/tutorials/gpcr/input.yaml -> build/bdist.linux-armv7l/wheel/pele_platform/Examples/tutorials/gpcr
2021-09-03T17:50:14,009   copying build/lib/pele_platform/Examples/tutorials/gpcr/complex.pdb -> build/bdist.linux-armv7l/wheel/pele_platform/Examples/tutorials/gpcr
2021-09-03T17:50:14,054   creating build/bdist.linux-armv7l/wheel/pele_platform/Examples/tutorials/ppi
2021-09-03T17:50:14,056   copying build/lib/pele_platform/Examples/tutorials/ppi/input.yaml -> build/bdist.linux-armv7l/wheel/pele_platform/Examples/tutorials/ppi
2021-09-03T17:50:14,061   copying build/lib/pele_platform/Examples/tutorials/ppi/4yy6_prep.pdb -> build/bdist.linux-armv7l/wheel/pele_platform/Examples/tutorials/ppi
2021-09-03T17:50:14,087   copying build/lib/pele_platform/Examples/tutorials/ppi/4yy6_ligand.pdb -> build/bdist.linux-armv7l/wheel/pele_platform/Examples/tutorials/ppi
2021-09-03T17:50:14,093   creating build/bdist.linux-armv7l/wheel/pele_platform/Examples/global
2021-09-03T17:50:14,095   copying build/lib/pele_platform/Examples/global/input.yaml -> build/bdist.linux-armv7l/wheel/pele_platform/Examples/global
2021-09-03T17:50:14,099   copying build/lib/pele_platform/Examples/global/input_inputs_asterisc.yaml -> build/bdist.linux-armv7l/wheel/pele_platform/Examples/global
2021-09-03T17:50:14,102   copying build/lib/pele_platform/Examples/global/input_defaults.yaml -> build/bdist.linux-armv7l/wheel/pele_platform/Examples/global
2021-09-03T17:50:14,106   copying build/lib/pele_platform/Examples/global/input_inputs.yaml -> build/bdist.linux-armv7l/wheel/pele_platform/Examples/global
2021-09-03T17:50:14,113   creating build/bdist.linux-armv7l/wheel/pele_platform/Examples/Msm
2021-09-03T17:50:14,116   copying build/lib/pele_platform/Examples/Msm/input.yaml -> build/bdist.linux-armv7l/wheel/pele_platform/Examples/Msm
2021-09-03T17:50:14,121   copying build/lib/pele_platform/Examples/Msm/PR_1A28_protein.pdb -> build/bdist.linux-armv7l/wheel/pele_platform/Examples/Msm
2021-09-03T17:50:14,160   copying build/lib/pele_platform/Examples/Msm/AS4_INIT.mae -> build/bdist.linux-armv7l/wheel/pele_platform/Examples/Msm
2021-09-03T17:50:14,167   copying build/lib/pele_platform/Examples/Msm/PR_1A28_xray_-_minimized.pdb -> build/bdist.linux-armv7l/wheel/pele_platform/Examples/Msm
2021-09-03T17:50:14,204   copying build/lib/pele_platform/Examples/Msm/PR_AS4.pdb -> build/bdist.linux-armv7l/wheel/pele_platform/Examples/Msm
2021-09-03T17:50:14,240   copying build/lib/pele_platform/Examples/Msm/PR_1A28_xray_-_minimized_processed.pdb -> build/bdist.linux-armv7l/wheel/pele_platform/Examples/Msm
2021-09-03T17:50:14,277   creating build/bdist.linux-armv7l/wheel/pele_platform/Examples/enzyme_engineering
2021-09-03T17:50:14,279   copying build/lib/pele_platform/Examples/enzyme_engineering/restart_saturated_mutagenesis.yaml -> build/bdist.linux-armv7l/wheel/pele_platform/Examples/enzyme_engineering
2021-09-03T17:50:14,283   copying build/lib/pele_platform/Examples/enzyme_engineering/saturated_mutagenesis.yaml -> build/bdist.linux-armv7l/wheel/pele_platform/Examples/enzyme_engineering
2021-09-03T17:50:14,287   copying build/lib/pele_platform/Examples/enzyme_engineering/wrong_cpus.yaml -> build/bdist.linux-armv7l/wheel/pele_platform/Examples/enzyme_engineering
2021-09-03T17:50:14,293   creating build/bdist.linux-armv7l/wheel/pele_platform/Examples/enzyme_engineering/directory_to_restart
2021-09-03T17:50:14,298   creating build/bdist.linux-armv7l/wheel/pele_platform/Examples/enzyme_engineering/directory_to_restart/Subset_2
2021-09-03T17:50:14,301   copying build/lib/pele_platform/Examples/enzyme_engineering/directory_to_restart/Subset_2/restart_saturated_mutagenesis.yaml -> build/bdist.linux-armv7l/wheel/pele_platform/Examples/enzyme_engineering/directory_to_restart/Subset_2
2021-09-03T17:50:14,308   creating build/bdist.linux-armv7l/wheel/pele_platform/Examples/enzyme_engineering/directory_to_restart/Subset_2/input
2021-09-03T17:50:14,310   copying build/lib/pele_platform/Examples/enzyme_engineering/directory_to_restart/Subset_2/input/T454E_processed.pdb -> build/bdist.linux-armv7l/wheel/pele_platform/Examples/enzyme_engineering/directory_to_restart/Subset_2/input
2021-09-03T17:50:14,369   copying build/lib/pele_platform/Examples/enzyme_engineering/directory_to_restart/Subset_2/input/T454E.pdb -> build/bdist.linux-armv7l/wheel/pele_platform/Examples/enzyme_engineering/directory_to_restart/Subset_2/input
2021-09-03T17:50:14,431   copying build/lib/pele_platform/Examples/enzyme_engineering/directory_to_restart/Subset_2/input/receptor.pdb -> build/bdist.linux-armv7l/wheel/pele_platform/Examples/enzyme_engineering/directory_to_restart/Subset_2/input
2021-09-03T17:50:14,494   copying build/lib/pele_platform/Examples/enzyme_engineering/directory_to_restart/Subset_2/input/ligand.pdb -> build/bdist.linux-armv7l/wheel/pele_platform/Examples/enzyme_engineering/directory_to_restart/Subset_2/input
2021-09-03T17:50:14,499   copying build/lib/pele_platform/Examples/enzyme_engineering/directory_to_restart/Subset_2/ANL.mae -> build/bdist.linux-armv7l/wheel/pele_platform/Examples/enzyme_engineering/directory_to_restart/Subset_2
2021-09-03T17:50:14,505   copying build/lib/pele_platform/Examples/enzyme_engineering/directory_to_restart/Subset_2/pele.conf -> build/bdist.linux-armv7l/wheel/pele_platform/Examples/enzyme_engineering/directory_to_restart/Subset_2
2021-09-03T17:50:14,510   copying build/lib/pele_platform/Examples/enzyme_engineering/directory_to_restart/Subset_2/adaptive.conf -> build/bdist.linux-armv7l/wheel/pele_platform/Examples/enzyme_engineering/directory_to_restart/Subset_2
2021-09-03T17:50:14,516   copying build/lib/pele_platform/Examples/enzyme_engineering/directory_to_restart/completed_mutations.log -> build/bdist.linux-armv7l/wheel/pele_platform/Examples/enzyme_engineering/directory_to_restart
2021-09-03T17:50:14,523   creating build/bdist.linux-armv7l/wheel/pele_platform/Examples/enzyme_engineering/directory_to_restart/Subset_1
2021-09-03T17:50:14,525   copying build/lib/pele_platform/Examples/enzyme_engineering/directory_to_restart/Subset_1/restart_saturated_mutagenesis.yaml -> build/bdist.linux-armv7l/wheel/pele_platform/Examples/enzyme_engineering/directory_to_restart/Subset_1
2021-09-03T17:50:14,533   creating build/bdist.linux-armv7l/wheel/pele_platform/Examples/enzyme_engineering/directory_to_restart/Subset_1/input
2021-09-03T17:50:14,535   copying build/lib/pele_platform/Examples/enzyme_engineering/directory_to_restart/Subset_1/input/T454D_processed.pdb -> build/bdist.linux-armv7l/wheel/pele_platform/Examples/enzyme_engineering/directory_to_restart/Subset_1/input
2021-09-03T17:50:14,594   copying build/lib/pele_platform/Examples/enzyme_engineering/directory_to_restart/Subset_1/input/T454D.pdb -> build/bdist.linux-armv7l/wheel/pele_platform/Examples/enzyme_engineering/directory_to_restart/Subset_1/input
2021-09-03T17:50:14,657   copying build/lib/pele_platform/Examples/enzyme_engineering/directory_to_restart/Subset_1/input/T454A_processed.pdb -> build/bdist.linux-armv7l/wheel/pele_platform/Examples/enzyme_engineering/directory_to_restart/Subset_1/input
2021-09-03T17:50:14,718   copying build/lib/pele_platform/Examples/enzyme_engineering/directory_to_restart/Subset_1/input/T454A.pdb -> build/bdist.linux-armv7l/wheel/pele_platform/Examples/enzyme_engineering/directory_to_restart/Subset_1/input
2021-09-03T17:50:14,777   copying build/lib/pele_platform/Examples/enzyme_engineering/directory_to_restart/Subset_1/input/receptor.pdb -> build/bdist.linux-armv7l/wheel/pele_platform/Examples/enzyme_engineering/directory_to_restart/Subset_1/input
2021-09-03T17:50:14,839   copying build/lib/pele_platform/Examples/enzyme_engineering/directory_to_restart/Subset_1/input/ligand.pdb -> build/bdist.linux-armv7l/wheel/pele_platform/Examples/enzyme_engineering/directory_to_restart/Subset_1/input
2021-09-03T17:50:14,847   creating build/bdist.linux-armv7l/wheel/pele_platform/Examples/enzyme_engineering/directory_to_restart/Subset_1/DataLocal
2021-09-03T17:50:14,851   creating build/bdist.linux-armv7l/wheel/pele_platform/Examples/enzyme_engineering/directory_to_restart/Subset_1/DataLocal/LigandRotamerLibs
2021-09-03T17:50:14,854   copying build/lib/pele_platform/Examples/enzyme_engineering/directory_to_restart/Subset_1/DataLocal/LigandRotamerLibs/ANL.rot.assign -> build/bdist.linux-armv7l/wheel/pele_platform/Examples/enzyme_engineering/directory_to_restart/Subset_1/DataLocal/LigandRotamerLibs
2021-09-03T17:50:14,860   creating build/bdist.linux-armv7l/wheel/pele_platform/Examples/enzyme_engineering/directory_to_restart/Subset_1/DataLocal/Templates
2021-09-03T17:50:14,863   creating build/bdist.linux-armv7l/wheel/pele_platform/Examples/enzyme_engineering/directory_to_restart/Subset_1/DataLocal/Templates/OPLS2005
2021-09-03T17:50:14,867   creating build/bdist.linux-armv7l/wheel/pele_platform/Examples/enzyme_engineering/directory_to_restart/Subset_1/DataLocal/Templates/OPLS2005/HeteroAtoms
2021-09-03T17:50:14,869   copying build/lib/pele_platform/Examples/enzyme_engineering/directory_to_restart/Subset_1/DataLocal/Templates/OPLS2005/HeteroAtoms/anlz -> build/bdist.linux-armv7l/wheel/pele_platform/Examples/enzyme_engineering/directory_to_restart/Subset_1/DataLocal/Templates/OPLS2005/HeteroAtoms
2021-09-03T17:50:14,875   copying build/lib/pele_platform/Examples/enzyme_engineering/directory_to_restart/Subset_1/ANL.mae -> build/bdist.linux-armv7l/wheel/pele_platform/Examples/enzyme_engineering/directory_to_restart/Subset_1
2021-09-03T17:50:14,882   creating build/bdist.linux-armv7l/wheel/pele_platform/Examples/enzyme_engineering/directory_to_restart/Subset_1/tmp_output
2021-09-03T17:50:14,884   copying build/lib/pele_platform/Examples/enzyme_engineering/directory_to_restart/Subset_1/tmp_output/initial_0_1.pdb -> build/bdist.linux-armv7l/wheel/pele_platform/Examples/enzyme_engineering/directory_to_restart/Subset_1/tmp_output
2021-09-03T17:50:14,947   copying build/lib/pele_platform/Examples/enzyme_engineering/directory_to_restart/Subset_1/tmp_output/initial_0_0.pdb -> build/bdist.linux-armv7l/wheel/pele_platform/Examples/enzyme_engineering/directory_to_restart/Subset_1/tmp_output
2021-09-03T17:50:15,020   copying build/lib/pele_platform/Examples/enzyme_engineering/directory_to_restart/Subset_1/tmp_output/controlFile0.conf -> build/bdist.linux-armv7l/wheel/pele_platform/Examples/enzyme_engineering/directory_to_restart/Subset_1/tmp_output
2021-09-03T17:50:15,026   copying build/lib/pele_platform/Examples/enzyme_engineering/directory_to_restart/Subset_1/pele.conf -> build/bdist.linux-armv7l/wheel/pele_platform/Examples/enzyme_engineering/directory_to_restart/Subset_1
2021-09-03T17:50:15,032   copying build/lib/pele_platform/Examples/enzyme_engineering/directory_to_restart/Subset_1/adaptive.conf -> build/bdist.linux-armv7l/wheel/pele_platform/Examples/enzyme_engineering/directory_to_restart/Subset_1
2021-09-03T17:50:15,037   creating build/bdist.linux-armv7l/wheel/pele_platform/Examples/enzyme_engineering/directory_to_restart/Subset_1/output
2021-09-03T17:50:15,040   creating build/bdist.linux-armv7l/wheel/pele_platform/Examples/enzyme_engineering/directory_to_restart/Subset_1/output/synchronization
2021-09-03T17:50:15,043   copying build/lib/pele_platform/Examples/enzyme_engineering/directory_to_restart/Subset_1/output/synchronization/syncFile.lock -> build/bdist.linux-armv7l/wheel/pele_platform/Examples/enzyme_engineering/directory_to_restart/Subset_1/output/synchronization
2021-09-03T17:50:15,050   creating build/bdist.linux-armv7l/wheel/pele_platform/Examples/enzyme_engineering/directory_to_restart/Subset_1/output/T454A
2021-09-03T17:50:15,053   copying build/lib/pele_platform/Examples/enzyme_engineering/directory_to_restart/Subset_1/output/T454A/trajectory_3.pdb -> build/bdist.linux-armv7l/wheel/pele_platform/Examples/enzyme_engineering/directory_to_restart/Subset_1/output/T454A
2021-09-03T17:50:15,171   copying build/lib/pele_platform/Examples/enzyme_engineering/directory_to_restart/Subset_1/output/T454A/report_1 -> build/bdist.linux-armv7l/wheel/pele_platform/Examples/enzyme_engineering/directory_to_restart/Subset_1/output/T454A
2021-09-03T17:50:15,177   copying build/lib/pele_platform/Examples/enzyme_engineering/directory_to_restart/Subset_1/output/T454A/report_3 -> build/bdist.linux-armv7l/wheel/pele_platform/Examples/enzyme_engineering/directory_to_restart/Subset_1/output/T454A
2021-09-03T17:50:15,182   copying build/lib/pele_platform/Examples/enzyme_engineering/directory_to_restart/Subset_1/output/T454A/trajectory_1.pdb -> build/bdist.linux-armv7l/wheel/pele_platform/Examples/enzyme_engineering/directory_to_restart/Subset_1/output/T454A
2021-09-03T17:50:15,299   copying build/lib/pele_platform/Examples/enzyme_engineering/directory_to_restart/Subset_1/output/originalControlFile.conf -> build/bdist.linux-armv7l/wheel/pele_platform/Examples/enzyme_engineering/directory_to_restart/Subset_1/output
2021-09-03T17:50:15,304   creating build/bdist.linux-armv7l/wheel/pele_platform/Examples/enzyme_engineering/directory_to_restart/Subset_1/output/0
2021-09-03T17:50:15,307   creating build/bdist.linux-armv7l/wheel/pele_platform/Examples/enzyme_engineering/directory_to_restart/Subset_1/output/0/clustering
2021-09-03T17:50:15,309   copying build/lib/pele_platform/Examples/enzyme_engineering/directory_to_restart/Subset_1/output/0/clustering/object.pkl -> build/bdist.linux-armv7l/wheel/pele_platform/Examples/enzyme_engineering/directory_to_restart/Subset_1/output/0/clustering
2021-09-03T17:50:15,314   copying build/lib/pele_platform/Examples/enzyme_engineering/directory_to_restart/Subset_1/output/0/clustering/summary.txt -> build/bdist.linux-armv7l/wheel/pele_platform/Examples/enzyme_engineering/directory_to_restart/Subset_1/output/0/clustering
2021-09-03T17:50:15,318   copying build/lib/pele_platform/Examples/enzyme_engineering/directory_to_restart/Subset_1/output/0/topologyMapping.txt -> build/bdist.linux-armv7l/wheel/pele_platform/Examples/enzyme_engineering/directory_to_restart/Subset_1/output/0
2021-09-03T17:50:15,325   creating build/bdist.linux-armv7l/wheel/pele_platform/Examples/enzyme_engineering/directory_to_restart/Subset_1/output/topologies
2021-09-03T17:50:15,328   copying build/lib/pele_platform/Examples/enzyme_engineering/directory_to_restart/Subset_1/output/topologies/topology_1.pdb -> build/bdist.linux-armv7l/wheel/pele_platform/Examples/enzyme_engineering/directory_to_restart/Subset_1/output/topologies
2021-09-03T17:50:15,391   copying build/lib/pele_platform/Examples/enzyme_engineering/directory_to_restart/Subset_1/output/topologies/topology_0.pdb -> build/bdist.linux-armv7l/wheel/pele_platform/Examples/enzyme_engineering/directory_to_restart/Subset_1/output/topologies
2021-09-03T17:50:15,452   copying build/lib/pele_platform/Examples/enzyme_engineering/directory_to_restart/Subset_1/output/topologies/topologies.pkl -> build/bdist.linux-armv7l/wheel/pele_platform/Examples/enzyme_engineering/directory_to_restart/Subset_1/output/topologies
2021-09-03T17:50:15,556   creating build/bdist.linux-armv7l/wheel/pele_platform/Examples/enzyme_engineering/directory_to_restart/Subset_1/output/T454D
2021-09-03T17:50:15,559   copying build/lib/pele_platform/Examples/enzyme_engineering/directory_to_restart/Subset_1/output/T454D/trajectory_4.pdb -> build/bdist.linux-armv7l/wheel/pele_platform/Examples/enzyme_engineering/directory_to_restart/Subset_1/output/T454D
2021-09-03T17:50:15,676   copying build/lib/pele_platform/Examples/enzyme_engineering/directory_to_restart/Subset_1/output/T454D/report_2 -> build/bdist.linux-armv7l/wheel/pele_platform/Examples/enzyme_engineering/directory_to_restart/Subset_1/output/T454D
2021-09-03T17:50:15,680   copying build/lib/pele_platform/Examples/enzyme_engineering/directory_to_restart/Subset_1/output/T454D/trajectory_2.pdb -> build/bdist.linux-armv7l/wheel/pele_platform/Examples/enzyme_engineering/directory_to_restart/Subset_1/output/T454D
2021-09-03T17:50:15,798   copying build/lib/pele_platform/Examples/enzyme_engineering/directory_to_restart/Subset_1/output/T454D/report_4 -> build/bdist.linux-armv7l/wheel/pele_platform/Examples/enzyme_engineering/directory_to_restart/Subset_1/output/T454D
2021-09-03T17:50:15,805   creating build/bdist.linux-armv7l/wheel/pele_platform/Examples/enzyme_engineering/pdb_files
2021-09-03T17:50:15,808   copying build/lib/pele_platform/Examples/enzyme_engineering/pdb_files/T454E.pdb -> build/bdist.linux-armv7l/wheel/pele_platform/Examples/enzyme_engineering/pdb_files
2021-09-03T17:50:15,870   copying build/lib/pele_platform/Examples/enzyme_engineering/pdb_files/T454D.pdb -> build/bdist.linux-armv7l/wheel/pele_platform/Examples/enzyme_engineering/pdb_files
2021-09-03T17:50:15,929   copying build/lib/pele_platform/Examples/enzyme_engineering/pdb_files/T454A.pdb -> build/bdist.linux-armv7l/wheel/pele_platform/Examples/enzyme_engineering/pdb_files
2021-09-03T17:50:15,993   creating build/bdist.linux-armv7l/wheel/pele_platform/Examples/exit
2021-09-03T17:50:15,996   copying build/lib/pele_platform/Examples/exit/input.yaml -> build/bdist.linux-armv7l/wheel/pele_platform/Examples/exit
2021-09-03T17:50:16,002   copying build/lib/pele_platform/Examples/exit/input_defaults.yaml -> build/bdist.linux-armv7l/wheel/pele_platform/Examples/exit
2021-09-03T17:50:16,010   creating build/bdist.linux-armv7l/wheel/pele_platform/Examples/frag
2021-09-03T17:50:16,012   copying build/lib/pele_platform/Examples/frag/input_sim.yaml -> build/bdist.linux-armv7l/wheel/pele_platform/Examples/frag
2021-09-03T17:50:16,018   copying build/lib/pele_platform/Examples/frag/1dyi_waters.pdb -> build/bdist.linux-armv7l/wheel/pele_platform/Examples/frag
2021-09-03T17:50:16,044   copying build/lib/pele_platform/Examples/frag/input_flags.yaml -> build/bdist.linux-armv7l/wheel/pele_platform/Examples/frag
2021-09-03T17:50:16,054   copying build/lib/pele_platform/Examples/frag/input_ai.yaml -> build/bdist.linux-armv7l/wheel/pele_platform/Examples/frag
2021-09-03T17:50:16,059   copying build/lib/pele_platform/Examples/frag/input_fragment_atom.yaml -> build/bdist.linux-armv7l/wheel/pele_platform/Examples/frag
2021-09-03T17:50:16,065   creating build/bdist.linux-armv7l/wheel/pele_platform/Examples/frag/sdf_test_lib
2021-09-03T17:50:16,068   copying build/lib/pele_platform/Examples/frag/sdf_test_lib/test_library.sdf -> build/bdist.linux-armv7l/wheel/pele_platform/Examples/frag/sdf_test_lib
2021-09-03T17:50:16,074   copying build/lib/pele_platform/Examples/frag/sequential.conf -> build/bdist.linux-armv7l/wheel/pele_platform/Examples/frag
2021-09-03T17:50:16,079   copying build/lib/pele_platform/Examples/frag/1w7h_preparation_structure_2w_processed.pdb -> build/bdist.linux-armv7l/wheel/pele_platform/Examples/frag
2021-09-03T17:50:16,129   copying build/lib/pele_platform/Examples/frag/flags.conf -> build/bdist.linux-armv7l/wheel/pele_platform/Examples/frag
2021-09-03T17:50:16,132   copying build/lib/pele_platform/Examples/frag/input_lib_pdb.yaml -> build/bdist.linux-armv7l/wheel/pele_platform/Examples/frag
2021-09-03T17:50:16,136   copying build/lib/pele_platform/Examples/frag/ligands.sdf -> build/bdist.linux-armv7l/wheel/pele_platform/Examples/frag
2021-09-03T17:50:16,140   copying build/lib/pele_platform/Examples/frag/input_symmetry.yaml -> build/bdist.linux-armv7l/wheel/pele_platform/Examples/frag
2021-09-03T17:50:16,144   copying build/lib/pele_platform/Examples/frag/1w7h_preparation_structure_2w.pdb -> build/bdist.linux-armv7l/wheel/pele_platform/Examples/frag
2021-09-03T17:50:16,195   copying build/lib/pele_platform/Examples/frag/input_core.yaml -> build/bdist.linux-armv7l/wheel/pele_platform/Examples/frag
2021-09-03T17:50:16,200   copying build/lib/pele_platform/Examples/frag/input_lib_sdf.yaml -> build/bdist.linux-armv7l/wheel/pele_platform/Examples/frag
2021-09-03T17:50:16,206   copying build/lib/pele_platform/Examples/frag/core.pdb -> build/bdist.linux-armv7l/wheel/pele_platform/Examples/frag
2021-09-03T17:50:16,213   creating build/bdist.linux-armv7l/wheel/pele_platform/Examples/frag/pdb_test_lib
2021-09-03T17:50:16,215   copying build/lib/pele_platform/Examples/frag/pdb_test_lib/mol2.pdb -> build/bdist.linux-armv7l/wheel/pele_platform/Examples/frag/pdb_test_lib
2021-09-03T17:50:16,221   copying build/lib/pele_platform/Examples/frag/pdb_test_lib/mol1.pdb -> build/bdist.linux-armv7l/wheel/pele_platform/Examples/frag/pdb_test_lib
2021-09-03T17:50:16,227   copying build/lib/pele_platform/Examples/frag/input_point_analysis.yaml -> build/bdist.linux-armv7l/wheel/pele_platform/Examples/frag
2021-09-03T17:50:16,232   creating build/bdist.linux-armv7l/wheel/pele_platform/Examples/frag/analysis_data
2021-09-03T17:50:16,235   creating build/bdist.linux-armv7l/wheel/pele_platform/Examples/frag/analysis_data/1w7h_preparation_structure_2w_processed_mol1C3-H2C1-H1
2021-09-03T17:50:16,238   creating build/bdist.linux-armv7l/wheel/pele_platform/Examples/frag/analysis_data/1w7h_preparation_structure_2w_processed_mol1C3-H2C1-H1/top_result
2021-09-03T17:50:16,240   copying build/lib/pele_platform/Examples/frag/analysis_data/1w7h_preparation_structure_2w_processed_mol1C3-H2C1-H1/top_result/epochsampling_result_trajectory_1.1_BindingEnergy-23.4636.pdb -> build/bdist.linux-armv7l/wheel/pele_platform/Examples/frag/analysis_data/1w7h_preparation_structure_2w_processed_mol1C3-H2C1-H1/top_result
2021-09-03T17:50:16,288   copying build/lib/pele_platform/Examples/frag/analysis_data/1w7h_preparation_structure_2w_processed_mol1C3-H2C1-H1/top_result/epochsampling_result_trajectory_2.1_BindingEnergy-25.1634.pdb -> build/bdist.linux-armv7l/wheel/pele_platform/Examples/frag/analysis_data/1w7h_preparation_structure_2w_processed_mol1C3-H2C1-H1/top_result
2021-09-03T17:50:16,338   copying build/lib/pele_platform/Examples/frag/ligands_water.sdf -> build/bdist.linux-armv7l/wheel/pele_platform/Examples/frag
2021-09-03T17:50:16,346   creating build/bdist.linux-armv7l/wheel/pele_platform/Examples/frag/sdf_joiner
2021-09-03T17:50:16,349   copying build/lib/pele_platform/Examples/frag/sdf_joiner/core3.pdb -> build/bdist.linux-armv7l/wheel/pele_platform/Examples/frag/sdf_joiner
2021-09-03T17:50:16,367   copying build/lib/pele_platform/Examples/frag/sdf_joiner/frag2.yml -> build/bdist.linux-armv7l/wheel/pele_platform/Examples/frag/sdf_joiner
2021-09-03T17:50:16,372   copying build/lib/pele_platform/Examples/frag/sdf_joiner/glide-dockSARS_core.pdb -> build/bdist.linux-armv7l/wheel/pele_platform/Examples/frag/sdf_joiner
2021-09-03T17:50:16,446   copying build/lib/pele_platform/Examples/frag/sdf_joiner/frag2.sdf -> build/bdist.linux-armv7l/wheel/pele_platform/Examples/frag/sdf_joiner
2021-09-03T17:50:16,456   copying build/lib/pele_platform/Examples/frag/sdf_joiner/frag31.sdf -> build/bdist.linux-armv7l/wheel/pele_platform/Examples/frag/sdf_joiner
2021-09-03T17:50:16,467   copying build/lib/pele_platform/Examples/frag/sdf_joiner/core2.pdb -> build/bdist.linux-armv7l/wheel/pele_platform/Examples/frag/sdf_joiner
2021-09-03T17:50:16,505   copying build/lib/pele_platform/Examples/frag/sdf_joiner/4RFM_series.sdf -> build/bdist.linux-armv7l/wheel/pele_platform/Examples/frag/sdf_joiner
2021-09-03T17:50:16,511   copying build/lib/pele_platform/Examples/frag/sdf_joiner/4RFM_core_sc.pdb -> build/bdist.linux-armv7l/wheel/pele_platform/Examples/frag/sdf_joiner
2021-09-03T17:50:16,560   copying build/lib/pele_platform/Examples/frag/sdf_joiner/frag5.yml -> build/bdist.linux-armv7l/wheel/pele_platform/Examples/frag/sdf_joiner
2021-09-03T17:50:16,566   copying build/lib/pele_platform/Examples/frag/sdf_joiner/13_serie.sdf -> build/bdist.linux-armv7l/wheel/pele_platform/Examples/frag/sdf_joiner
2021-09-03T17:50:16,578   copying build/lib/pele_platform/Examples/frag/sdf_joiner/frag.sdf -> build/bdist.linux-armv7l/wheel/pele_platform/Examples/frag/sdf_joiner
2021-09-03T17:50:16,586   copying build/lib/pele_platform/Examples/frag/sdf_joiner/frag3.yml -> build/bdist.linux-armv7l/wheel/pele_platform/Examples/frag/sdf_joiner
2021-09-03T17:50:16,592   copying build/lib/pele_platform/Examples/frag/sdf_joiner/frag4.yml -> build/bdist.linux-armv7l/wheel/pele_platform/Examples/frag/sdf_joiner
2021-09-03T17:50:16,597   copying build/lib/pele_platform/Examples/frag/sdf_joiner/frag3.sdf -> build/bdist.linux-armv7l/wheel/pele_platform/Examples/frag/sdf_joiner
2021-09-03T17:50:16,608   copying build/lib/pele_platform/Examples/frag/sdf_joiner/4RFM_proc.pdb -> build/bdist.linux-armv7l/wheel/pele_platform/Examples/frag/sdf_joiner
2021-09-03T17:50:16,658   copying build/lib/pele_platform/Examples/frag/sdf_joiner/frag.yml -> build/bdist.linux-armv7l/wheel/pele_platform/Examples/frag/sdf_joiner
2021-09-03T17:50:16,662   copying build/lib/pele_platform/Examples/frag/input_frag_waters.yaml -> build/bdist.linux-armv7l/wheel/pele_platform/Examples/frag
2021-09-03T17:50:16,666   copying build/lib/pele_platform/Examples/frag/1dyi_no_waters.pdb -> build/bdist.linux-armv7l/wheel/pele_platform/Examples/frag
2021-09-03T17:50:16,690   copying build/lib/pele_platform/Examples/frag/input_sim_xtc.yaml -> build/bdist.linux-armv7l/wheel/pele_platform/Examples/frag
2021-09-03T17:50:16,696   copying build/lib/pele_platform/Examples/frag/input_core_sdf.yaml -> build/bdist.linux-armv7l/wheel/pele_platform/Examples/frag
2021-09-03T17:50:16,703   creating build/bdist.linux-armv7l/wheel/pele_platform/Examples/frag/checker
2021-09-03T17:50:16,706   copying build/lib/pele_platform/Examples/frag/checker/4RFM_series.sdf -> build/bdist.linux-armv7l/wheel/pele_platform/Examples/frag/checker
2021-09-03T17:50:16,713   copying build/lib/pele_platform/Examples/frag/checker/4RFM_proc.pdb -> build/bdist.linux-armv7l/wheel/pele_platform/Examples/frag/checker
2021-09-03T17:50:16,719   copying build/lib/pele_platform/Examples/frag/checker/receptor.sdf -> build/bdist.linux-armv7l/wheel/pele_platform/Examples/frag/checker
2021-09-03T17:50:16,750   copying build/lib/pele_platform/Examples/frag/amino.pdb -> build/bdist.linux-armv7l/wheel/pele_platform/Examples/frag
2021-09-03T17:50:16,757   creating build/bdist.linux-armv7l/wheel/pele_platform/Examples/box
2021-09-03T17:50:16,759   copying build/lib/pele_platform/Examples/box/input.yaml -> build/bdist.linux-armv7l/wheel/pele_platform/Examples/box
2021-09-03T17:50:16,767   creating build/bdist.linux-armv7l/wheel/pele_platform/Examples/induced_fit
2021-09-03T17:50:16,769   copying build/lib/pele_platform/Examples/induced_fit/input_exhaustive.yaml -> build/bdist.linux-armv7l/wheel/pele_platform/Examples/induced_fit
2021-09-03T17:50:16,775   copying build/lib/pele_platform/Examples/induced_fit/input_exhaustive_defaults.yaml -> build/bdist.linux-armv7l/wheel/pele_platform/Examples/induced_fit
2021-09-03T17:50:16,780   copying build/lib/pele_platform/Examples/induced_fit/input_fast.yaml -> build/bdist.linux-armv7l/wheel/pele_platform/Examples/induced_fit
2021-09-03T17:50:16,784   copying build/lib/pele_platform/Examples/induced_fit/input_mae.yaml -> build/bdist.linux-armv7l/wheel/pele_platform/Examples/induced_fit
2021-09-03T17:50:16,787   copying build/lib/pele_platform/Examples/induced_fit/input_fast_defaults.yaml -> build/bdist.linux-armv7l/wheel/pele_platform/Examples/induced_fit
2021-09-03T17:50:16,793   creating build/bdist.linux-armv7l/wheel/pele_platform/Examples/water
2021-09-03T17:50:16,795   copying build/lib/pele_platform/Examples/water/input_lig_defaults.yaml -> build/bdist.linux-armv7l/wheel/pele_platform/Examples/water
2021-09-03T17:50:16,800   copying build/lib/pele_platform/Examples/water/input_lig.yaml -> build/bdist.linux-armv7l/wheel/pele_platform/Examples/water
2021-09-03T17:50:16,806   copying build/lib/pele_platform/Examples/water/input_all.yaml -> build/bdist.linux-armv7l/wheel/pele_platform/Examples/water
2021-09-03T17:50:16,811   copying build/lib/pele_platform/Examples/water/input_previous_water.yaml -> build/bdist.linux-armv7l/wheel/pele_platform/Examples/water
2021-09-03T17:50:16,816   copying build/lib/pele_platform/Examples/water/water2_pele.conf -> build/bdist.linux-armv7l/wheel/pele_platform/Examples/water
2021-09-03T17:50:16,822   copying build/lib/pele_platform/Examples/water/water_processed.pdb -> build/bdist.linux-armv7l/wheel/pele_platform/Examples/water
2021-09-03T17:50:16,872   copying build/lib/pele_platform/Examples/water/input_bs_defaults.yaml -> build/bdist.linux-armv7l/wheel/pele_platform/Examples/water
2021-09-03T17:50:16,878   copying build/lib/pele_platform/Examples/water/complex_ref_LESSH2O.pdb -> build/bdist.linux-armv7l/wheel/pele_platform/Examples/water
2021-09-03T17:50:16,926   copying build/lib/pele_platform/Examples/water/complex_induced.pdb -> build/bdist.linux-armv7l/wheel/pele_platform/Examples/water
2021-09-03T17:50:16,945   copying build/lib/pele_platform/Examples/water/input_induced.yaml -> build/bdist.linux-armv7l/wheel/pele_platform/Examples/water
2021-09-03T17:50:16,950   copying build/lib/pele_platform/Examples/water/input_nwaters.yaml -> build/bdist.linux-armv7l/wheel/pele_platform/Examples/water
2021-09-03T17:50:16,956   copying build/lib/pele_platform/Examples/water/input_bs.yaml -> build/bdist.linux-armv7l/wheel/pele_platform/Examples/water
2021-09-03T17:50:16,961   copying build/lib/pele_platform/Examples/water/water_pele.conf -> build/bdist.linux-armv7l/wheel/pele_platform/Examples/water
2021-09-03T17:50:16,969   creating build/bdist.linux-armv7l/wheel/pele_platform/Examples/RNA
2021-09-03T17:50:16,972   copying build/lib/pele_platform/Examples/RNA/input.yaml -> build/bdist.linux-armv7l/wheel/pele_platform/Examples/RNA
2021-09-03T17:50:16,977   copying build/lib/pele_platform/Examples/RNA/5C45_prep_proc.pdb -> build/bdist.linux-armv7l/wheel/pele_platform/Examples/RNA
2021-09-03T17:50:17,019   copying build/lib/pele_platform/Examples/RNA/5C45_prep.pdb -> build/bdist.linux-armv7l/wheel/pele_platform/Examples/RNA
2021-09-03T17:50:17,061   copying build/lib/pele_platform/Examples/RNA/2l94.yaml -> build/bdist.linux-armv7l/wheel/pele_platform/Examples/RNA
2021-09-03T17:50:17,067   copying build/lib/pele_platform/Examples/RNA/input_induced.yaml -> build/bdist.linux-armv7l/wheel/pele_platform/Examples/RNA
2021-09-03T17:50:17,074   creating build/bdist.linux-armv7l/wheel/pele_platform/Examples/preparation
2021-09-03T17:50:17,076   copying build/lib/pele_platform/Examples/preparation/input_space.yaml -> build/bdist.linux-armv7l/wheel/pele_platform/Examples/preparation
2021-09-03T17:50:17,082   copying build/lib/pele_platform/Examples/preparation/6qmk_repeated.pdb -> build/bdist.linux-armv7l/wheel/pele_platform/Examples/preparation
2021-09-03T17:50:17,137   copying build/lib/pele_platform/Examples/preparation/input.yaml -> build/bdist.linux-armv7l/wheel/pele_platform/Examples/preparation
2021-09-03T17:50:17,141   copying build/lib/pele_platform/Examples/preparation/complex.pdb -> build/bdist.linux-armv7l/wheel/pele_platform/Examples/preparation
2021-09-03T17:50:17,176   copying build/lib/pele_platform/Examples/preparation/parametrization_flags.yaml -> build/bdist.linux-armv7l/wheel/pele_platform/Examples/preparation
2021-09-03T17:50:17,180   copying build/lib/pele_platform/Examples/preparation/complex_2.pdb -> build/bdist.linux-armv7l/wheel/pele_platform/Examples/preparation
2021-09-03T17:50:17,238   copying build/lib/pele_platform/Examples/preparation/input_nonstandard.yaml -> build/bdist.linux-armv7l/wheel/pele_platform/Examples/preparation
2021-09-03T17:50:17,243   copying build/lib/pele_platform/Examples/preparation/6qmk_correct.pdb -> build/bdist.linux-armv7l/wheel/pele_platform/Examples/preparation
2021-09-03T17:50:17,293   creating build/bdist.linux-armv7l/wheel/pele_platform/Examples/covalent_docking
2021-09-03T17:50:17,296   copying build/lib/pele_platform/Examples/covalent_docking/6M06_prepared.pdb -> build/bdist.linux-armv7l/wheel/pele_platform/Examples/covalent_docking
2021-09-03T17:50:17,348   copying build/lib/pele_platform/Examples/covalent_docking/6P0M_prepared.pdb -> build/bdist.linux-armv7l/wheel/pele_platform/Examples/covalent_docking
2021-09-03T17:50:17,384   copying build/lib/pele_platform/Examples/covalent_docking/5XXD_prepared.pdb -> build/bdist.linux-armv7l/wheel/pele_platform/Examples/covalent_docking
2021-09-03T17:50:17,442   copying build/lib/pele_platform/Examples/covalent_docking/input2.yaml -> build/bdist.linux-armv7l/wheel/pele_platform/Examples/covalent_docking
2021-09-03T17:50:17,447   copying build/lib/pele_platform/Examples/covalent_docking/input_defaults.yaml -> build/bdist.linux-armv7l/wheel/pele_platform/Examples/covalent_docking
2021-09-03T17:50:17,452   copying build/lib/pele_platform/Examples/covalent_docking/input_defaults_refinement.yaml -> build/bdist.linux-armv7l/wheel/pele_platform/Examples/covalent_docking
2021-09-03T17:50:17,458   copying build/lib/pele_platform/Examples/covalent_docking/input3.yaml -> build/bdist.linux-armv7l/wheel/pele_platform/Examples/covalent_docking
2021-09-03T17:50:17,463   copying build/lib/pele_platform/Examples/covalent_docking/input1.yaml -> build/bdist.linux-armv7l/wheel/pele_platform/Examples/covalent_docking
2021-09-03T17:50:17,470   creating build/bdist.linux-armv7l/wheel/pele_platform/Examples/gpcr
2021-09-03T17:50:17,472   copying build/lib/pele_platform/Examples/gpcr/input.yaml -> build/bdist.linux-armv7l/wheel/pele_platform/Examples/gpcr
2021-09-03T17:50:17,476   copying build/lib/pele_platform/Examples/gpcr/complex.pdb -> build/bdist.linux-armv7l/wheel/pele_platform/Examples/gpcr
2021-09-03T17:50:17,517   copying build/lib/pele_platform/Examples/gpcr/complex_processed.pdb -> build/bdist.linux-armv7l/wheel/pele_platform/Examples/gpcr
2021-09-03T17:50:17,559   copying build/lib/pele_platform/Examples/gpcr/input_defaults.yaml -> build/bdist.linux-armv7l/wheel/pele_platform/Examples/gpcr
2021-09-03T17:50:17,563   copying build/lib/pele_platform/Examples/gpcr/input_atom_error.yaml -> build/bdist.linux-armv7l/wheel/pele_platform/Examples/gpcr
2021-09-03T17:50:17,567   copying build/lib/pele_platform/Examples/gpcr/input_defaults2.yaml -> build/bdist.linux-armv7l/wheel/pele_platform/Examples/gpcr
2021-09-03T17:50:17,572   creating build/bdist.linux-armv7l/wheel/pele_platform/Examples/Adaptive
2021-09-03T17:50:17,574   copying build/lib/pele_platform/Examples/Adaptive/test.sl -> build/bdist.linux-armv7l/wheel/pele_platform/Examples/Adaptive
2021-09-03T17:50:17,580   copying build/lib/pele_platform/Examples/Adaptive/STR.rot.assign -> build/bdist.linux-armv7l/wheel/pele_platform/Examples/Adaptive
2021-09-03T17:50:17,585   copying build/lib/pele_platform/Examples/Adaptive/strz -> build/bdist.linux-armv7l/wheel/pele_platform/Examples/Adaptive
2021-09-03T17:50:17,596   copying build/lib/pele_platform/Examples/Adaptive/pele_file_4Adaptive.conf -> build/bdist.linux-armv7l/wheel/pele_platform/Examples/Adaptive
2021-09-03T17:50:17,602   copying build/lib/pele_platform/Examples/Adaptive/adaptive.conf -> build/bdist.linux-armv7l/wheel/pele_platform/Examples/Adaptive
2021-09-03T17:50:17,609   creating build/bdist.linux-armv7l/wheel/pele_platform/Examples/site_finder
2021-09-03T17:50:17,611   copying build/lib/pele_platform/Examples/site_finder/complex.pdb -> build/bdist.linux-armv7l/wheel/pele_platform/Examples/site_finder
2021-09-03T17:50:17,659   copying build/lib/pele_platform/Examples/site_finder/input_skipref.yaml -> build/bdist.linux-armv7l/wheel/pele_platform/Examples/site_finder
2021-09-03T17:50:17,664   copying build/lib/pele_platform/Examples/site_finder/input_restart.yaml -> build/bdist.linux-armv7l/wheel/pele_platform/Examples/site_finder
2021-09-03T17:50:17,669   copying build/lib/pele_platform/Examples/site_finder/input_global_xtc.yaml -> build/bdist.linux-armv7l/wheel/pele_platform/Examples/site_finder
2021-09-03T17:50:17,675   copying build/lib/pele_platform/Examples/site_finder/local.yaml -> build/bdist.linux-armv7l/wheel/pele_platform/Examples/site_finder
2021-09-03T17:50:17,680   copying build/lib/pele_platform/Examples/site_finder/input_global.yaml -> build/bdist.linux-armv7l/wheel/pele_platform/Examples/site_finder
2021-09-03T17:50:17,685   copying build/lib/pele_platform/Examples/site_finder/input_folder.yaml -> build/bdist.linux-armv7l/wheel/pele_platform/Examples/site_finder
2021-09-03T17:50:17,690   copying build/lib/pele_platform/Examples/site_finder/global.yaml -> build/bdist.linux-armv7l/wheel/pele_platform/Examples/site_finder
2021-09-03T17:50:17,696   creating build/bdist.linux-armv7l/wheel/pele_platform/Examples/PPI
2021-09-03T17:50:17,698   copying build/lib/pele_platform/Examples/PPI/1tnf_prep.pdb -> build/bdist.linux-armv7l/wheel/pele_platform/Examples/PPI
2021-09-03T17:50:17,758   copying build/lib/pele_platform/Examples/PPI/input.yaml -> build/bdist.linux-armv7l/wheel/pele_platform/Examples/PPI
2021-09-03T17:50:17,763   copying build/lib/pele_platform/Examples/PPI/input_skipref.yaml -> build/bdist.linux-armv7l/wheel/pele_platform/Examples/PPI
2021-09-03T17:50:17,769   copying build/lib/pele_platform/Examples/PPI/1f47_prep.pdb -> build/bdist.linux-armv7l/wheel/pele_platform/Examples/PPI
2021-09-03T17:50:17,792   copying build/lib/pele_platform/Examples/PPI/1tnf_ligand.pdb -> build/bdist.linux-armv7l/wheel/pele_platform/Examples/PPI
2021-09-03T17:50:17,799   copying build/lib/pele_platform/Examples/PPI/1f47_ligand.pdb -> build/bdist.linux-armv7l/wheel/pele_platform/Examples/PPI
2021-09-03T17:50:17,805   copying build/lib/pele_platform/Examples/PPI/input_folder.yaml -> build/bdist.linux-armv7l/wheel/pele_platform/Examples/PPI
2021-09-03T17:50:17,814   creating build/bdist.linux-armv7l/wheel/pele_platform/Examples/constraints
2021-09-03T17:50:17,816   copying build/lib/pele_platform/Examples/constraints/4qnr_prep.pdb -> build/bdist.linux-armv7l/wheel/pele_platform/Examples/constraints
2021-09-03T17:50:17,869   copying build/lib/pele_platform/Examples/constraints/4zu9_prep.pdb -> build/bdist.linux-armv7l/wheel/pele_platform/Examples/constraints
2021-09-03T17:50:17,983   copying build/lib/pele_platform/Examples/constraints/input_constrain_smarts.yaml -> build/bdist.linux-armv7l/wheel/pele_platform/Examples/constraints
2021-09-03T17:50:17,988   copying build/lib/pele_platform/Examples/constraints/input_square_planar_polarisation.yaml -> build/bdist.linux-armv7l/wheel/pele_platform/Examples/constraints
2021-09-03T17:50:17,994   copying build/lib/pele_platform/Examples/constraints/input_square_planar.yaml -> build/bdist.linux-armv7l/wheel/pele_platform/Examples/constraints
2021-09-03T17:50:17,999   copying build/lib/pele_platform/Examples/constraints/input_ignore.yaml -> build/bdist.linux-armv7l/wheel/pele_platform/Examples/constraints
2021-09-03T17:50:18,004   copying build/lib/pele_platform/Examples/constraints/4w4o_prep.pdb -> build/bdist.linux-armv7l/wheel/pele_platform/Examples/constraints
2021-09-03T17:50:18,036   copying build/lib/pele_platform/Examples/constraints/input_tetrahedral.yaml -> build/bdist.linux-armv7l/wheel/pele_platform/Examples/constraints
2021-09-03T17:50:18,041   copying build/lib/pele_platform/Examples/constraints/complex_smiles_error.pdb -> build/bdist.linux-armv7l/wheel/pele_platform/Examples/constraints
2021-09-03T17:50:18,082   copying build/lib/pele_platform/Examples/constraints/input_metals.yaml -> build/bdist.linux-armv7l/wheel/pele_platform/Examples/constraints
2021-09-03T17:50:18,086   copying build/lib/pele_platform/Examples/constraints/1zop.pdb -> build/bdist.linux-armv7l/wheel/pele_platform/Examples/constraints
2021-09-03T17:50:18,117   copying build/lib/pele_platform/Examples/constraints/input_no_metal_constraints.yaml -> build/bdist.linux-armv7l/wheel/pele_platform/Examples/constraints
2021-09-03T17:50:18,122   copying build/lib/pele_platform/Examples/constraints/input_constrain_smiles.yaml -> build/bdist.linux-armv7l/wheel/pele_platform/Examples/constraints
2021-09-03T17:50:18,128   copying build/lib/pele_platform/Examples/constraints/input_ca_ppp.yaml -> build/bdist.linux-armv7l/wheel/pele_platform/Examples/constraints
2021-09-03T17:50:18,133   copying build/lib/pele_platform/Examples/constraints/input_all_metal_constraints.yaml -> build/bdist.linux-armv7l/wheel/pele_platform/Examples/constraints
2021-09-03T17:50:18,138   copying build/lib/pele_platform/Examples/constraints/ca_constraints.pdb -> build/bdist.linux-armv7l/wheel/pele_platform/Examples/constraints
2021-09-03T17:50:18,204   copying build/lib/pele_platform/Examples/constraints/input_external_constraints.yaml -> build/bdist.linux-armv7l/wheel/pele_platform/Examples/constraints
2021-09-03T17:50:18,209   copying build/lib/pele_platform/Examples/constraints/input_k.yaml -> build/bdist.linux-armv7l/wheel/pele_platform/Examples/constraints
2021-09-03T17:50:18,214   copying build/lib/pele_platform/Examples/constraints/fail_input_permissive_constraints.yaml -> build/bdist.linux-armv7l/wheel/pele_platform/Examples/constraints
2021-09-03T17:50:18,220   copying build/lib/pele_platform/Examples/constraints/input_smiles_error.yaml -> build/bdist.linux-armv7l/wheel/pele_platform/Examples/constraints
2021-09-03T17:50:18,225   copying build/lib/pele_platform/Examples/constraints/pass_input_permissive_constraints.yaml -> build/bdist.linux-armv7l/wheel/pele_platform/Examples/constraints
2021-09-03T17:50:18,230   copying build/lib/pele_platform/Examples/constraints/input_ca_noppp.yaml -> build/bdist.linux-armv7l/wheel/pele_platform/Examples/constraints
2021-09-03T17:50:18,234   copying build/lib/pele_platform/Examples/constraints/4w5i_prep.pdb -> build/bdist.linux-armv7l/wheel/pele_platform/Examples/constraints
2021-09-03T17:50:18,266   copying build/lib/pele_platform/Examples/constraints/no_connects.pdb -> build/bdist.linux-armv7l/wheel/pele_platform/Examples/constraints
2021-09-03T17:50:18,272   copying build/lib/pele_platform/Examples/constraints/4l3a_prep.pdb -> build/bdist.linux-armv7l/wheel/pele_platform/Examples/constraints
2021-09-03T17:50:18,326   copying build/lib/pele_platform/Examples/constraints/input_permissive_exception.yaml -> build/bdist.linux-armv7l/wheel/pele_platform/Examples/constraints
2021-09-03T17:50:18,333   creating build/bdist.linux-armv7l/wheel/pele_platform/Examples/flags
2021-09-03T17:50:18,336   copying build/lib/pele_platform/Examples/flags/input.yaml -> build/bdist.linux-armv7l/wheel/pele_platform/Examples/flags
2021-09-03T17:50:18,343   creating build/bdist.linux-armv7l/wheel/pele_platform/Examples/singularity
2021-09-03T17:50:18,346   copying build/lib/pele_platform/Examples/singularity/input_frag.yaml -> build/bdist.linux-armv7l/wheel/pele_platform/Examples/singularity
2021-09-03T17:50:18,351   copying build/lib/pele_platform/Examples/singularity/input_adaptive.yaml -> build/bdist.linux-armv7l/wheel/pele_platform/Examples/singularity
2021-09-03T17:50:18,356   creating build/bdist.linux-armv7l/wheel/pele_platform/Examples/rescoring
2021-09-03T17:50:18,358   copying build/lib/pele_platform/Examples/rescoring/input.yaml -> build/bdist.linux-armv7l/wheel/pele_platform/Examples/rescoring
2021-09-03T17:50:18,363   copying build/lib/pele_platform/Examples/rescoring/input_defaults.yaml -> build/bdist.linux-armv7l/wheel/pele_platform/Examples/rescoring
2021-09-03T17:50:18,368   creating build/bdist.linux-armv7l/wheel/pele_platform/Examples/checker
2021-09-03T17:50:18,370   copying build/lib/pele_platform/Examples/checker/input_space.yaml -> build/bdist.linux-armv7l/wheel/pele_platform/Examples/checker
2021-09-03T17:50:18,376   copying build/lib/pele_platform/Examples/checker/input_atom_string.yaml -> build/bdist.linux-armv7l/wheel/pele_platform/Examples/checker
2021-09-03T17:50:18,382   copying build/lib/pele_platform/Examples/checker/complex2.pdb -> build/bdist.linux-armv7l/wheel/pele_platform/Examples/checker
2021-09-03T17:50:18,408   copying build/lib/pele_platform/Examples/checker/input_rotamer.yaml -> build/bdist.linux-armv7l/wheel/pele_platform/Examples/checker
2021-09-03T17:50:18,415   copying build/lib/pele_platform/Examples/checker/multiple_simulations.yaml -> build/bdist.linux-armv7l/wheel/pele_platform/Examples/checker
2021-09-03T17:50:18,421   copying build/lib/pele_platform/Examples/checker/input.yaml -> build/bdist.linux-armv7l/wheel/pele_platform/Examples/checker
2021-09-03T17:50:18,428   copying build/lib/pele_platform/Examples/checker/complex.pdb -> build/bdist.linux-armv7l/wheel/pele_platform/Examples/checker
2021-09-03T17:50:18,475   copying build/lib/pele_platform/Examples/checker/input_pele_exec.yaml -> build/bdist.linux-armv7l/wheel/pele_platform/Examples/checker
2021-09-03T17:50:18,481   copying build/lib/pele_platform/Examples/checker/input_template.yaml -> build/bdist.linux-armv7l/wheel/pele_platform/Examples/checker
2021-09-03T17:50:18,488   copying build/lib/pele_platform/Examples/checker/input_map_atom_num.yaml -> build/bdist.linux-armv7l/wheel/pele_platform/Examples/checker
2021-09-03T17:50:18,494   copying build/lib/pele_platform/Examples/checker/complex_unk.yaml -> build/bdist.linux-armv7l/wheel/pele_platform/Examples/checker
2021-09-03T17:50:18,559   copying build/lib/pele_platform/Examples/checker/input_unk.yaml -> build/bdist.linux-armv7l/wheel/pele_platform/Examples/checker
2021-09-03T17:50:18,566   copying build/lib/pele_platform/Examples/checker/input_env.yaml -> build/bdist.linux-armv7l/wheel/pele_platform/Examples/checker
2021-09-03T17:50:18,573   copying build/lib/pele_platform/Examples/checker/input_underscore.yaml -> build/bdist.linux-armv7l/wheel/pele_platform/Examples/checker
2021-09-03T17:50:18,579   copying build/lib/pele_platform/Examples/checker/incompatible_flags.yaml -> build/bdist.linux-armv7l/wheel/pele_platform/Examples/checker
2021-09-03T17:50:18,583   copying build/lib/pele_platform/Examples/checker/negative_residues.pdb -> build/bdist.linux-armv7l/wheel/pele_platform/Examples/checker
2021-09-03T17:50:18,589   copying build/lib/pele_platform/Examples/checker/input_map_atom_str.yaml -> build/bdist.linux-armv7l/wheel/pele_platform/Examples/checker
2021-09-03T17:50:18,594   copying build/lib/pele_platform/Examples/checker/ligand2.pdb -> build/bdist.linux-armv7l/wheel/pele_platform/Examples/checker
2021-09-03T17:50:18,600   copying build/lib/pele_platform/Examples/checker/input_tab.yaml -> build/bdist.linux-armv7l/wheel/pele_platform/Examples/checker
2021-09-03T17:50:18,605   copying build/lib/pele_platform/Examples/checker/mapping_complex.pdb -> build/bdist.linux-armv7l/wheel/pele_platform/Examples/checker
2021-09-03T17:50:18,671   creating build/bdist.linux-armv7l/wheel/pele_platform/covalent_docking
2021-09-03T17:50:18,675   copying build/lib/pele_platform/covalent_docking/main.py -> build/bdist.linux-armv7l/wheel/pele_platform/covalent_docking
2021-09-03T17:50:18,684   copying build/lib/pele_platform/covalent_docking/__init__.py -> build/bdist.linux-armv7l/wheel/pele_platform/covalent_docking
2021-09-03T17:50:18,691   creating build/bdist.linux-armv7l/wheel/pele_platform/gpcr
2021-09-03T17:50:18,695   copying build/lib/pele_platform/gpcr/main.py -> build/bdist.linux-armv7l/wheel/pele_platform/gpcr
2021-09-03T17:50:18,701   copying build/lib/pele_platform/gpcr/__init__.py -> build/bdist.linux-armv7l/wheel/pele_platform/gpcr
2021-09-03T17:50:18,707   creating build/bdist.linux-armv7l/wheel/pele_platform/Adaptive
2021-09-03T17:50:18,709   copying build/lib/pele_platform/Adaptive/parametrizer.py -> build/bdist.linux-armv7l/wheel/pele_platform/Adaptive
2021-09-03T17:50:18,720   copying build/lib/pele_platform/Adaptive/interaction_restrictions.py -> build/bdist.linux-armv7l/wheel/pele_platform/Adaptive
2021-09-03T17:50:18,727   copying build/lib/pele_platform/Adaptive/simulation.py -> build/bdist.linux-armv7l/wheel/pele_platform/Adaptive
2021-09-03T17:50:18,737   copying build/lib/pele_platform/Adaptive/plop_solvent.py -> build/bdist.linux-armv7l/wheel/pele_platform/Adaptive
2021-09-03T17:50:18,742   copying build/lib/pele_platform/Adaptive/plop_ligand_parametrization.py -> build/bdist.linux-armv7l/wheel/pele_platform/Adaptive
2021-09-03T17:50:18,747   copying build/lib/pele_platform/Adaptive/__init__.py -> build/bdist.linux-armv7l/wheel/pele_platform/Adaptive
2021-09-03T17:50:18,752   copying build/lib/pele_platform/Adaptive/metrics.py -> build/bdist.linux-armv7l/wheel/pele_platform/Adaptive
2021-09-03T17:50:18,757   copying build/lib/pele_platform/Adaptive/box.py -> build/bdist.linux-armv7l/wheel/pele_platform/Adaptive
2021-09-03T17:50:18,762   copying build/lib/pele_platform/Adaptive/pca.py -> build/bdist.linux-armv7l/wheel/pele_platform/Adaptive
2021-09-03T17:50:18,768   creating build/bdist.linux-armv7l/wheel/pele_platform/site_finder
2021-09-03T17:50:18,770   copying build/lib/pele_platform/site_finder/main.py -> build/bdist.linux-armv7l/wheel/pele_platform/site_finder
2021-09-03T17:50:18,777   copying build/lib/pele_platform/site_finder/__init__.py -> build/bdist.linux-armv7l/wheel/pele_platform/site_finder
2021-09-03T17:50:18,784   creating build/bdist.linux-armv7l/wheel/pele_platform/PPI
2021-09-03T17:50:18,787   copying build/lib/pele_platform/PPI/cluster.py -> build/bdist.linux-armv7l/wheel/pele_platform/PPI
2021-09-03T17:50:18,795   copying build/lib/pele_platform/PPI/simulation_launcher.py -> build/bdist.linux-armv7l/wheel/pele_platform/PPI
2021-09-03T17:50:18,801   copying build/lib/pele_platform/PPI/main.py -> build/bdist.linux-armv7l/wheel/pele_platform/PPI
2021-09-03T17:50:18,807   copying build/lib/pele_platform/PPI/__init__.py -> build/bdist.linux-armv7l/wheel/pele_platform/PPI
2021-09-03T17:50:18,811   copying build/lib/pele_platform/PPI/preparation.py -> build/bdist.linux-armv7l/wheel/pele_platform/PPI
2021-09-03T17:50:18,816   running install_egg_info
2021-09-03T17:50:18,834   Copying pele_platform.egg-info to build/bdist.linux-armv7l/wheel/pele_platform-1.6.0-py3.5.egg-info
2021-09-03T17:50:18,864   running install_scripts
2021-09-03T17:50:19,101   creating build/bdist.linux-armv7l/wheel/pele_platform-1.6.0.dist-info/WHEEL
2021-09-03T17:50:35,685   Building wheel for pele-platform (setup.py): finished with status 'done'
2021-09-03T17:50:35,877   Created wheel for pele-platform: filename=pele_platform-1.6.0-py3-none-any.whl size=11422430 sha256=a90b83350ffdd162d0d81d6b1fc8f7193b5a97d25088dd494e44c9ed5bc1ee68
2021-09-03T17:50:35,878   Stored in directory: /tmp/pip-ephem-wheel-cache-jbm4kqwr/wheels/d3/0e/7b/9cb4811dfbb3d1bdc0ac770cfc01906df018b214f9e6feff39
2021-09-03T17:50:35,944 Successfully built pele-platform
2021-09-03T17:50:37,922 Removed build tracker: '/tmp/pip-req-tracker-tcz7fjug'