2021-09-16T07:03:38,183 Created temporary directory: /tmp/pip-ephem-wheel-cache-4kc837l3 2021-09-16T07:03:38,186 Created temporary directory: /tmp/pip-req-tracker-s4fzqf6q 2021-09-16T07:03:38,186 Initialized build tracking at /tmp/pip-req-tracker-s4fzqf6q 2021-09-16T07:03:38,186 Created build tracker: /tmp/pip-req-tracker-s4fzqf6q 2021-09-16T07:03:38,187 Entered build tracker: /tmp/pip-req-tracker-s4fzqf6q 2021-09-16T07:03:38,187 Created temporary directory: /tmp/pip-wheel-2kdg76rt 2021-09-16T07:03:38,221 Looking in indexes: https://pypi.org/simple, https://www.piwheels.org/simple 2021-09-16T07:03:38,224 2 location(s) to search for versions of stereopy: 2021-09-16T07:03:38,224 * https://pypi.org/simple/stereopy/ 2021-09-16T07:03:38,224 * https://www.piwheels.org/simple/stereopy/ 2021-09-16T07:03:38,225 Fetching project page and analyzing links: https://pypi.org/simple/stereopy/ 2021-09-16T07:03:38,225 Getting page https://pypi.org/simple/stereopy/ 2021-09-16T07:03:38,227 Found index url https://pypi.org/simple 2021-09-16T07:03:38,318 Found link https://files.pythonhosted.org/packages/ba/e8/211af80a80404175bc1fd16031e19187a8f9f30bbbf83ef798b805bcbfa8/stereopy-0.1.tar.gz#sha256=618b0c895b568f307841c4b6e95448eb73cc56ad5df3b5aff48261dc8a4eb24b (from https://pypi.org/simple/stereopy/) (requires-python:>=3.6), version: 0.1 2021-09-16T07:03:38,319 Found link https://files.pythonhosted.org/packages/8f/b9/c6937d46ebf500f64995f52f08cedcb7da142757c370a71646baf6aff8d4/stereopy-0.1.9.tar.gz#sha256=bbc2f792b3615175ceb42333f8d781a4b15ec9d090980da088bbbc757d4cb154 (from https://pypi.org/simple/stereopy/) (requires-python:>=3.6), version: 0.1.9 2021-09-16T07:03:38,319 Found link https://files.pythonhosted.org/packages/54/d5/44997684dbd629b1d1b6456fd36c6c8a469ef33fd42840b3610b3cc130ea/stereopy-0.2.0.tar.gz#sha256=17d9332696faf468d354a87d2ba78027fc3ebd023dcba9f1ebd0c9cff418e99e (from https://pypi.org/simple/stereopy/) (requires-python:>=3.6), version: 0.2.0 2021-09-16T07:03:38,320 Fetching project page and analyzing links: https://www.piwheels.org/simple/stereopy/ 2021-09-16T07:03:38,320 Getting page https://www.piwheels.org/simple/stereopy/ 2021-09-16T07:03:38,321 Found index url https://www.piwheels.org/simple 2021-09-16T07:03:38,416 Skipping link: No binaries permitted for stereopy: https://www.piwheels.org/simple/stereopy/stereopy-0.1-py3-none-any.whl#sha256=1436faf8dcf176e53adce94e2bc87792de7d4cdaaed317c408128bc9daa5e231 (from https://www.piwheels.org/simple/stereopy/) (requires-python:>=3.6) 2021-09-16T07:03:38,417 Skipping link: not a file: https://www.piwheels.org/simple/stereopy/ 2021-09-16T07:03:38,417 Skipping link: not a file: https://pypi.org/simple/stereopy/ 2021-09-16T07:03:38,437 Given no hashes to check 1 links for project 'stereopy': discarding no candidates 2021-09-16T07:03:38,452 Collecting stereopy==0.2.0 2021-09-16T07:03:38,454 Created temporary directory: /tmp/pip-unpack-9wfgcowv 2021-09-16T07:03:39,190 Downloading stereopy-0.2.0.tar.gz (15.2 MB) 2021-09-16T07:03:42,192 Added stereopy==0.2.0 from https://files.pythonhosted.org/packages/54/d5/44997684dbd629b1d1b6456fd36c6c8a469ef33fd42840b3610b3cc130ea/stereopy-0.2.0.tar.gz#sha256=17d9332696faf468d354a87d2ba78027fc3ebd023dcba9f1ebd0c9cff418e99e to build tracker '/tmp/pip-req-tracker-s4fzqf6q' 2021-09-16T07:03:42,193 Running setup.py (path:/tmp/pip-wheel-2kdg76rt/stereopy_d659f710d55d4f9db8ad3dc555e5fd41/setup.py) egg_info for package stereopy 2021-09-16T07:03:42,194 Created temporary directory: /tmp/pip-pip-egg-info-arjg_3hv 2021-09-16T07:03:42,194 Running command python setup.py egg_info 2021-09-16T07:24:43,746 running egg_info 2021-09-16T07:24:43,749 creating /tmp/pip-pip-egg-info-arjg_3hv/stereopy.egg-info 2021-09-16T07:24:43,750 writing /tmp/pip-pip-egg-info-arjg_3hv/stereopy.egg-info/PKG-INFO 2021-09-16T07:24:43,752 writing dependency_links to /tmp/pip-pip-egg-info-arjg_3hv/stereopy.egg-info/dependency_links.txt 2021-09-16T07:24:43,755 writing requirements to /tmp/pip-pip-egg-info-arjg_3hv/stereopy.egg-info/requires.txt 2021-09-16T07:24:43,756 writing top-level names to /tmp/pip-pip-egg-info-arjg_3hv/stereopy.egg-info/top_level.txt 2021-09-16T07:24:43,758 writing manifest file '/tmp/pip-pip-egg-info-arjg_3hv/stereopy.egg-info/SOURCES.txt' 2021-09-16T07:24:43,986 listing git files failed - pretending there aren't any 2021-09-16T07:24:44,001 reading manifest file '/tmp/pip-pip-egg-info-arjg_3hv/stereopy.egg-info/SOURCES.txt' 2021-09-16T07:24:44,003 adding license file 'LICENSE' 2021-09-16T07:24:44,010 writing manifest file '/tmp/pip-pip-egg-info-arjg_3hv/stereopy.egg-info/SOURCES.txt' 2021-09-16T07:24:44,093 Source in /tmp/pip-wheel-2kdg76rt/stereopy_d659f710d55d4f9db8ad3dc555e5fd41 has version 0.2.0, which satisfies requirement stereopy==0.2.0 from https://files.pythonhosted.org/packages/54/d5/44997684dbd629b1d1b6456fd36c6c8a469ef33fd42840b3610b3cc130ea/stereopy-0.2.0.tar.gz#sha256=17d9332696faf468d354a87d2ba78027fc3ebd023dcba9f1ebd0c9cff418e99e 2021-09-16T07:24:44,094 Removed stereopy==0.2.0 from https://files.pythonhosted.org/packages/54/d5/44997684dbd629b1d1b6456fd36c6c8a469ef33fd42840b3610b3cc130ea/stereopy-0.2.0.tar.gz#sha256=17d9332696faf468d354a87d2ba78027fc3ebd023dcba9f1ebd0c9cff418e99e from build tracker '/tmp/pip-req-tracker-s4fzqf6q' 2021-09-16T07:24:44,100 Created temporary directory: /tmp/pip-unpack-jlcc_kf7 2021-09-16T07:24:44,101 Building wheels for collected packages: stereopy 2021-09-16T07:24:44,105 Created temporary directory: /tmp/pip-wheel-kiwihu1c 2021-09-16T07:24:44,106 Building wheel for stereopy (setup.py): started 2021-09-16T07:24:44,106 Destination directory: /tmp/pip-wheel-kiwihu1c 2021-09-16T07:24:44,106 Running command /usr/bin/python3 -u -c 'import io, os, sys, setuptools, tokenize; sys.argv[0] = '"'"'/tmp/pip-wheel-2kdg76rt/stereopy_d659f710d55d4f9db8ad3dc555e5fd41/setup.py'"'"'; __file__='"'"'/tmp/pip-wheel-2kdg76rt/stereopy_d659f710d55d4f9db8ad3dc555e5fd41/setup.py'"'"';f = getattr(tokenize, '"'"'open'"'"', open)(__file__) if os.path.exists(__file__) else io.StringIO('"'"'from setuptools import setup; setup()'"'"');code = f.read().replace('"'"'\r\n'"'"', '"'"'\n'"'"');f.close();exec(compile(code, __file__, '"'"'exec'"'"'))' bdist_wheel -d /tmp/pip-wheel-kiwihu1c 2021-09-16T07:24:51,455 running bdist_wheel 2021-09-16T07:24:51,460 running build 2021-09-16T07:24:51,460 running build_py 2021-09-16T07:24:51,596 creating build 2021-09-16T07:24:51,596 creating build/lib 2021-09-16T07:24:51,597 creating build/lib/stereo 2021-09-16T07:24:51,598 copying stereo/config.py -> build/lib/stereo 2021-09-16T07:24:51,601 copying stereo/__init__.py -> build/lib/stereo 2021-09-16T07:24:51,602 copying stereo/log_manager.py -> build/lib/stereo 2021-09-16T07:24:51,605 creating build/lib/stereo/core 2021-09-16T07:24:51,607 copying stereo/core/stereo_result.py -> build/lib/stereo/core 2021-09-16T07:24:51,609 copying stereo/core/__init__.py -> build/lib/stereo/core 2021-09-16T07:24:51,611 copying stereo/core/data.py -> build/lib/stereo/core 2021-09-16T07:24:51,613 copying stereo/core/cell.py -> build/lib/stereo/core 2021-09-16T07:24:51,615 copying stereo/core/tool_base.py -> build/lib/stereo/core 2021-09-16T07:24:51,618 copying stereo/core/stereo_exp_data.py -> build/lib/stereo/core 2021-09-16T07:24:51,621 copying stereo/core/gene.py -> build/lib/stereo/core 2021-09-16T07:24:51,623 copying stereo/core/st_pipeline.py -> build/lib/stereo/core 2021-09-16T07:24:51,627 creating build/lib/stereo/io 2021-09-16T07:24:51,628 copying stereo/io/__init__.py -> build/lib/stereo/io 2021-09-16T07:24:51,631 copying stereo/io/h5ad.py -> build/lib/stereo/io 2021-09-16T07:24:51,634 copying stereo/io/gef.py -> build/lib/stereo/io 2021-09-16T07:24:51,637 copying stereo/io/reader.py -> build/lib/stereo/io 2021-09-16T07:24:51,640 copying stereo/io/writer.py -> build/lib/stereo/io 2021-09-16T07:24:51,644 creating build/lib/stereo/plots 2021-09-16T07:24:51,645 copying stereo/plots/qc.py -> build/lib/stereo/plots 2021-09-16T07:24:51,648 copying stereo/plots/__init__.py -> build/lib/stereo/plots 2021-09-16T07:24:51,650 copying stereo/plots/plot_collection.py -> build/lib/stereo/plots 2021-09-16T07:24:51,653 copying stereo/plots/marker_genes.py -> build/lib/stereo/plots 2021-09-16T07:24:51,656 copying stereo/plots/scatter.py -> build/lib/stereo/plots 2021-09-16T07:24:51,660 creating build/lib/stereo/utils 2021-09-16T07:24:51,661 copying stereo/utils/correlation.py -> build/lib/stereo/utils 2021-09-16T07:24:51,663 copying stereo/utils/data_helper.py -> build/lib/stereo/utils 2021-09-16T07:24:51,666 copying stereo/utils/spmatrix_helper.py -> build/lib/stereo/utils 2021-09-16T07:24:51,668 copying stereo/utils/__init__.py -> build/lib/stereo/utils 2021-09-16T07:24:51,670 copying stereo/utils/hvg_utils.py -> build/lib/stereo/utils 2021-09-16T07:24:51,674 creating build/lib/stereo/algorithm 2021-09-16T07:24:51,675 copying stereo/algorithm/highly_variable_genes.py -> build/lib/stereo/algorithm 2021-09-16T07:24:51,678 copying stereo/algorithm/phenograph.py -> build/lib/stereo/algorithm 2021-09-16T07:24:51,680 copying stereo/algorithm/__init__.py -> build/lib/stereo/algorithm 2021-09-16T07:24:51,682 copying stereo/algorithm/dim_reduce.py -> build/lib/stereo/algorithm 2021-09-16T07:24:51,685 copying stereo/algorithm/statistics.py -> build/lib/stereo/algorithm 2021-09-16T07:24:51,687 copying stereo/algorithm/normalization.py -> build/lib/stereo/algorithm 2021-09-16T07:24:51,689 copying stereo/algorithm/neighbors.py -> build/lib/stereo/algorithm 2021-09-16T07:24:51,692 copying stereo/algorithm/umap.py -> build/lib/stereo/algorithm 2021-09-16T07:24:51,695 copying stereo/algorithm/leiden.py -> build/lib/stereo/algorithm 2021-09-16T07:24:51,697 copying stereo/algorithm/spatial_pattern_score.py -> build/lib/stereo/algorithm 2021-09-16T07:24:51,700 copying stereo/algorithm/_louvain.py -> build/lib/stereo/algorithm 2021-09-16T07:24:51,703 creating build/lib/stereo/tools 2021-09-16T07:24:51,704 copying stereo/tools/cluster.py -> build/lib/stereo/tools 2021-09-16T07:24:51,707 copying stereo/tools/highly_variable_genes.py -> build/lib/stereo/tools 2021-09-16T07:24:51,710 copying stereo/tools/cell_type_anno.py -> build/lib/stereo/tools 2021-09-16T07:24:51,713 copying stereo/tools/__init__.py -> build/lib/stereo/tools 2021-09-16T07:24:51,715 copying stereo/tools/dim_reduce.py -> build/lib/stereo/tools 2021-09-16T07:24:51,718 copying stereo/tools/find_markers.py -> build/lib/stereo/tools 2021-09-16T07:24:51,721 copying stereo/tools/spatial_lag.py -> build/lib/stereo/tools 2021-09-16T07:24:51,723 copying stereo/tools/cluster_new.py -> build/lib/stereo/tools 2021-09-16T07:24:51,726 copying stereo/tools/clustering.py -> build/lib/stereo/tools 2021-09-16T07:24:51,729 copying stereo/tools/spatial_pattern_score.py -> build/lib/stereo/tools 2021-09-16T07:24:51,732 creating build/lib/stereo/preprocess 2021-09-16T07:24:51,733 copying stereo/preprocess/filter.py -> build/lib/stereo/preprocess 2021-09-16T07:24:51,736 copying stereo/preprocess/qc.py -> build/lib/stereo/preprocess 2021-09-16T07:24:51,739 copying stereo/preprocess/normalize.py -> build/lib/stereo/preprocess 2021-09-16T07:24:51,741 copying stereo/preprocess/__init__.py -> build/lib/stereo/preprocess 2021-09-16T07:24:51,743 copying stereo/preprocess/sc_transform.py -> build/lib/stereo/preprocess 2021-09-16T07:24:51,746 creating build/lib/stereo/image 2021-09-16T07:24:51,747 copying stereo/image/__init__.py -> build/lib/stereo/image 2021-09-16T07:24:51,750 copying stereo/image/pyramid.py -> build/lib/stereo/image 2021-09-16T07:24:51,753 creating build/lib/stereo/plots/interact_plot 2021-09-16T07:24:51,754 copying stereo/plots/interact_plot/__init__.py -> build/lib/stereo/plots/interact_plot 2021-09-16T07:24:51,757 copying stereo/plots/interact_plot/spatial_cluster.py -> build/lib/stereo/plots/interact_plot 2021-09-16T07:24:51,759 copying stereo/plots/interact_plot/interactive_scatter.py -> build/lib/stereo/plots/interact_plot 2021-09-16T07:24:51,763 creating build/lib/stereo/plots/_plot_basic 2021-09-16T07:24:51,764 copying stereo/plots/_plot_basic/scatter_plt.py -> build/lib/stereo/plots/_plot_basic 2021-09-16T07:24:51,766 copying stereo/plots/_plot_basic/heatmap_plt.py -> build/lib/stereo/plots/_plot_basic 2021-09-16T07:24:51,769 copying stereo/plots/_plot_basic/__init__.py -> build/lib/stereo/plots/_plot_basic 2021-09-16T07:24:51,772 copying stereo/plots/_plot_basic/get_stereo_data.py -> build/lib/stereo/plots/_plot_basic 2021-09-16T07:24:51,775 creating build/lib/stereo/algorithm/pysctransform 2021-09-16T07:24:51,776 copying stereo/algorithm/pysctransform/fit.py -> build/lib/stereo/algorithm/pysctransform 2021-09-16T07:24:51,779 copying stereo/algorithm/pysctransform/plotting.py -> build/lib/stereo/algorithm/pysctransform 2021-09-16T07:24:51,781 copying stereo/algorithm/pysctransform/__init__.py -> build/lib/stereo/algorithm/pysctransform 2021-09-16T07:24:51,784 copying stereo/algorithm/pysctransform/jax_bfgs.py -> build/lib/stereo/algorithm/pysctransform 2021-09-16T07:24:51,786 copying stereo/algorithm/pysctransform/r_bw.py -> build/lib/stereo/algorithm/pysctransform 2021-09-16T07:24:51,788 copying stereo/algorithm/pysctransform/fit_glmgp.py -> build/lib/stereo/algorithm/pysctransform 2021-09-16T07:24:51,791 copying stereo/algorithm/pysctransform/pysctransform.py -> build/lib/stereo/algorithm/pysctransform 2021-09-16T07:24:51,795 creating build/lib/stereo/image/segmentation 2021-09-16T07:24:51,796 copying stereo/image/segmentation/__init__.py -> build/lib/stereo/image/segmentation 2021-09-16T07:24:51,798 copying stereo/image/segmentation/segment.py -> build/lib/stereo/image/segmentation 2021-09-16T07:24:51,802 creating build/lib/stereo/image/segmentation/seg_utils 2021-09-16T07:24:51,803 copying stereo/image/segmentation/seg_utils/tissue_seg_pipeline.py -> build/lib/stereo/image/segmentation/seg_utils 2021-09-16T07:24:51,805 copying stereo/image/segmentation/seg_utils/grade.py -> build/lib/stereo/image/segmentation/seg_utils 2021-09-16T07:24:51,808 copying stereo/image/segmentation/seg_utils/cell_infer.py -> build/lib/stereo/image/segmentation/seg_utils 2021-09-16T07:24:51,811 copying stereo/image/segmentation/seg_utils/__init__.py -> build/lib/stereo/image/segmentation/seg_utils 2021-09-16T07:24:51,813 copying stereo/image/segmentation/seg_utils/image.py -> build/lib/stereo/image/segmentation/seg_utils 2021-09-16T07:24:51,815 copying stereo/image/segmentation/seg_utils/find_maxima.py -> build/lib/stereo/image/segmentation/seg_utils 2021-09-16T07:24:51,818 copying stereo/image/segmentation/seg_utils/utils.py -> build/lib/stereo/image/segmentation/seg_utils 2021-09-16T07:24:51,821 copying stereo/image/segmentation/seg_utils/tissue_seg.py -> build/lib/stereo/image/segmentation/seg_utils 2021-09-16T07:24:51,824 copying stereo/image/segmentation/seg_utils/cell_seg_pipeline.py -> build/lib/stereo/image/segmentation/seg_utils 2021-09-16T07:24:51,826 running egg_info 2021-09-16T07:24:51,830 writing stereopy.egg-info/PKG-INFO 2021-09-16T07:24:51,832 writing dependency_links to stereopy.egg-info/dependency_links.txt 2021-09-16T07:24:51,835 writing requirements to stereopy.egg-info/requires.txt 2021-09-16T07:24:51,836 writing top-level names to stereopy.egg-info/top_level.txt 2021-09-16T07:24:51,877 listing git files failed - pretending there aren't any 2021-09-16T07:24:51,889 reading manifest file 'stereopy.egg-info/SOURCES.txt' 2021-09-16T07:24:51,905 adding license file 'LICENSE' 2021-09-16T07:24:51,915 writing manifest file 'stereopy.egg-info/SOURCES.txt' 2021-09-16T07:24:51,940 installing to build/bdist.linux-armv7l/wheel 2021-09-16T07:24:51,941 running install 2021-09-16T07:24:51,942 running install_lib 2021-09-16T07:24:51,946 creating build/bdist.linux-armv7l 2021-09-16T07:24:51,947 creating build/bdist.linux-armv7l/wheel 2021-09-16T07:24:51,949 creating build/bdist.linux-armv7l/wheel/stereo 2021-09-16T07:24:51,950 copying build/lib/stereo/config.py -> build/bdist.linux-armv7l/wheel/stereo 2021-09-16T07:24:51,954 creating build/bdist.linux-armv7l/wheel/stereo/core 2021-09-16T07:24:51,955 copying build/lib/stereo/core/stereo_result.py -> build/bdist.linux-armv7l/wheel/stereo/core 2021-09-16T07:24:51,957 copying build/lib/stereo/core/__init__.py -> build/bdist.linux-armv7l/wheel/stereo/core 2021-09-16T07:24:51,959 copying build/lib/stereo/core/data.py -> build/bdist.linux-armv7l/wheel/stereo/core 2021-09-16T07:24:51,961 copying build/lib/stereo/core/cell.py -> build/bdist.linux-armv7l/wheel/stereo/core 2021-09-16T07:24:51,963 copying build/lib/stereo/core/tool_base.py -> build/bdist.linux-armv7l/wheel/stereo/core 2021-09-16T07:24:51,966 copying build/lib/stereo/core/stereo_exp_data.py -> build/bdist.linux-armv7l/wheel/stereo/core 2021-09-16T07:24:51,969 copying build/lib/stereo/core/gene.py -> build/bdist.linux-armv7l/wheel/stereo/core 2021-09-16T07:24:51,971 copying build/lib/stereo/core/st_pipeline.py -> build/bdist.linux-armv7l/wheel/stereo/core 2021-09-16T07:24:51,975 creating build/bdist.linux-armv7l/wheel/stereo/io 2021-09-16T07:24:51,976 copying build/lib/stereo/io/__init__.py -> build/bdist.linux-armv7l/wheel/stereo/io 2021-09-16T07:24:51,979 copying build/lib/stereo/io/h5ad.py -> build/bdist.linux-armv7l/wheel/stereo/io 2021-09-16T07:24:51,982 copying build/lib/stereo/io/gef.py -> build/bdist.linux-armv7l/wheel/stereo/io 2021-09-16T07:24:51,985 copying build/lib/stereo/io/reader.py -> build/bdist.linux-armv7l/wheel/stereo/io 2021-09-16T07:24:51,988 copying build/lib/stereo/io/writer.py -> build/bdist.linux-armv7l/wheel/stereo/io 2021-09-16T07:24:51,992 creating build/bdist.linux-armv7l/wheel/stereo/plots 2021-09-16T07:24:51,993 copying build/lib/stereo/plots/qc.py -> build/bdist.linux-armv7l/wheel/stereo/plots 2021-09-16T07:24:51,996 copying build/lib/stereo/plots/__init__.py -> build/bdist.linux-armv7l/wheel/stereo/plots 2021-09-16T07:24:51,999 copying build/lib/stereo/plots/plot_collection.py -> build/bdist.linux-armv7l/wheel/stereo/plots 2021-09-16T07:24:52,002 copying build/lib/stereo/plots/marker_genes.py -> build/bdist.linux-armv7l/wheel/stereo/plots 2021-09-16T07:24:52,006 creating build/bdist.linux-armv7l/wheel/stereo/plots/interact_plot 2021-09-16T07:24:52,007 copying build/lib/stereo/plots/interact_plot/__init__.py -> build/bdist.linux-armv7l/wheel/stereo/plots/interact_plot 2021-09-16T07:24:52,009 copying build/lib/stereo/plots/interact_plot/spatial_cluster.py -> build/bdist.linux-armv7l/wheel/stereo/plots/interact_plot 2021-09-16T07:24:52,012 copying build/lib/stereo/plots/interact_plot/interactive_scatter.py -> build/bdist.linux-armv7l/wheel/stereo/plots/interact_plot 2021-09-16T07:24:52,015 copying build/lib/stereo/plots/scatter.py -> build/bdist.linux-armv7l/wheel/stereo/plots 2021-09-16T07:24:52,019 creating build/bdist.linux-armv7l/wheel/stereo/plots/_plot_basic 2021-09-16T07:24:52,020 copying build/lib/stereo/plots/_plot_basic/scatter_plt.py -> build/bdist.linux-armv7l/wheel/stereo/plots/_plot_basic 2021-09-16T07:24:52,023 copying build/lib/stereo/plots/_plot_basic/heatmap_plt.py -> build/bdist.linux-armv7l/wheel/stereo/plots/_plot_basic 2021-09-16T07:24:52,026 copying build/lib/stereo/plots/_plot_basic/__init__.py -> build/bdist.linux-armv7l/wheel/stereo/plots/_plot_basic 2021-09-16T07:24:52,029 copying build/lib/stereo/plots/_plot_basic/get_stereo_data.py -> build/bdist.linux-armv7l/wheel/stereo/plots/_plot_basic 2021-09-16T07:24:52,031 copying build/lib/stereo/__init__.py -> build/bdist.linux-armv7l/wheel/stereo 2021-09-16T07:24:52,033 copying build/lib/stereo/log_manager.py -> build/bdist.linux-armv7l/wheel/stereo 2021-09-16T07:24:52,036 creating build/bdist.linux-armv7l/wheel/stereo/utils 2021-09-16T07:24:52,037 copying build/lib/stereo/utils/correlation.py -> build/bdist.linux-armv7l/wheel/stereo/utils 2021-09-16T07:24:52,040 copying build/lib/stereo/utils/data_helper.py -> build/bdist.linux-armv7l/wheel/stereo/utils 2021-09-16T07:24:52,042 copying build/lib/stereo/utils/spmatrix_helper.py -> build/bdist.linux-armv7l/wheel/stereo/utils 2021-09-16T07:24:52,044 copying build/lib/stereo/utils/__init__.py -> build/bdist.linux-armv7l/wheel/stereo/utils 2021-09-16T07:24:52,047 copying build/lib/stereo/utils/hvg_utils.py -> build/bdist.linux-armv7l/wheel/stereo/utils 2021-09-16T07:24:52,051 creating build/bdist.linux-armv7l/wheel/stereo/algorithm 2021-09-16T07:24:52,052 copying build/lib/stereo/algorithm/highly_variable_genes.py -> build/bdist.linux-armv7l/wheel/stereo/algorithm 2021-09-16T07:24:52,055 copying build/lib/stereo/algorithm/phenograph.py -> build/bdist.linux-armv7l/wheel/stereo/algorithm 2021-09-16T07:24:52,057 copying build/lib/stereo/algorithm/__init__.py -> build/bdist.linux-armv7l/wheel/stereo/algorithm 2021-09-16T07:24:52,060 creating build/bdist.linux-armv7l/wheel/stereo/algorithm/pysctransform 2021-09-16T07:24:52,061 copying build/lib/stereo/algorithm/pysctransform/fit.py -> build/bdist.linux-armv7l/wheel/stereo/algorithm/pysctransform 2021-09-16T07:24:52,064 copying build/lib/stereo/algorithm/pysctransform/plotting.py -> build/bdist.linux-armv7l/wheel/stereo/algorithm/pysctransform 2021-09-16T07:24:52,066 copying build/lib/stereo/algorithm/pysctransform/__init__.py -> build/bdist.linux-armv7l/wheel/stereo/algorithm/pysctransform 2021-09-16T07:24:52,069 copying build/lib/stereo/algorithm/pysctransform/jax_bfgs.py -> build/bdist.linux-armv7l/wheel/stereo/algorithm/pysctransform 2021-09-16T07:24:52,071 copying build/lib/stereo/algorithm/pysctransform/r_bw.py -> build/bdist.linux-armv7l/wheel/stereo/algorithm/pysctransform 2021-09-16T07:24:52,074 copying build/lib/stereo/algorithm/pysctransform/fit_glmgp.py -> build/bdist.linux-armv7l/wheel/stereo/algorithm/pysctransform 2021-09-16T07:24:52,076 copying build/lib/stereo/algorithm/pysctransform/pysctransform.py -> build/bdist.linux-armv7l/wheel/stereo/algorithm/pysctransform 2021-09-16T07:24:52,080 copying build/lib/stereo/algorithm/dim_reduce.py -> build/bdist.linux-armv7l/wheel/stereo/algorithm 2021-09-16T07:24:52,082 copying build/lib/stereo/algorithm/statistics.py -> build/bdist.linux-armv7l/wheel/stereo/algorithm 2021-09-16T07:24:52,085 copying build/lib/stereo/algorithm/normalization.py -> build/bdist.linux-armv7l/wheel/stereo/algorithm 2021-09-16T07:24:52,087 copying build/lib/stereo/algorithm/neighbors.py -> build/bdist.linux-armv7l/wheel/stereo/algorithm 2021-09-16T07:24:52,090 copying build/lib/stereo/algorithm/umap.py -> build/bdist.linux-armv7l/wheel/stereo/algorithm 2021-09-16T07:24:52,093 copying build/lib/stereo/algorithm/leiden.py -> build/bdist.linux-armv7l/wheel/stereo/algorithm 2021-09-16T07:24:52,095 copying build/lib/stereo/algorithm/spatial_pattern_score.py -> build/bdist.linux-armv7l/wheel/stereo/algorithm 2021-09-16T07:24:52,098 copying build/lib/stereo/algorithm/_louvain.py -> build/bdist.linux-armv7l/wheel/stereo/algorithm 2021-09-16T07:24:52,101 creating build/bdist.linux-armv7l/wheel/stereo/tools 2021-09-16T07:24:52,102 copying build/lib/stereo/tools/cluster.py -> build/bdist.linux-armv7l/wheel/stereo/tools 2021-09-16T07:24:52,106 copying build/lib/stereo/tools/highly_variable_genes.py -> build/bdist.linux-armv7l/wheel/stereo/tools 2021-09-16T07:24:52,108 copying build/lib/stereo/tools/cell_type_anno.py -> build/bdist.linux-armv7l/wheel/stereo/tools 2021-09-16T07:24:52,112 copying build/lib/stereo/tools/__init__.py -> build/bdist.linux-armv7l/wheel/stereo/tools 2021-09-16T07:24:52,114 copying build/lib/stereo/tools/dim_reduce.py -> build/bdist.linux-armv7l/wheel/stereo/tools 2021-09-16T07:24:52,117 copying build/lib/stereo/tools/find_markers.py -> build/bdist.linux-armv7l/wheel/stereo/tools 2021-09-16T07:24:52,120 copying build/lib/stereo/tools/spatial_lag.py -> build/bdist.linux-armv7l/wheel/stereo/tools 2021-09-16T07:24:52,122 copying build/lib/stereo/tools/cluster_new.py -> build/bdist.linux-armv7l/wheel/stereo/tools 2021-09-16T07:24:52,125 copying build/lib/stereo/tools/clustering.py -> build/bdist.linux-armv7l/wheel/stereo/tools 2021-09-16T07:24:52,128 copying build/lib/stereo/tools/spatial_pattern_score.py -> build/bdist.linux-armv7l/wheel/stereo/tools 2021-09-16T07:24:52,131 creating build/bdist.linux-armv7l/wheel/stereo/preprocess 2021-09-16T07:24:52,132 copying build/lib/stereo/preprocess/filter.py -> build/bdist.linux-armv7l/wheel/stereo/preprocess 2021-09-16T07:24:52,135 copying build/lib/stereo/preprocess/qc.py -> build/bdist.linux-armv7l/wheel/stereo/preprocess 2021-09-16T07:24:52,137 copying build/lib/stereo/preprocess/normalize.py -> build/bdist.linux-armv7l/wheel/stereo/preprocess 2021-09-16T07:24:52,140 copying build/lib/stereo/preprocess/__init__.py -> build/bdist.linux-armv7l/wheel/stereo/preprocess 2021-09-16T07:24:52,142 copying build/lib/stereo/preprocess/sc_transform.py -> build/bdist.linux-armv7l/wheel/stereo/preprocess 2021-09-16T07:24:52,146 creating build/bdist.linux-armv7l/wheel/stereo/image 2021-09-16T07:24:52,147 copying build/lib/stereo/image/__init__.py -> build/bdist.linux-armv7l/wheel/stereo/image 2021-09-16T07:24:52,149 copying build/lib/stereo/image/pyramid.py -> build/bdist.linux-armv7l/wheel/stereo/image 2021-09-16T07:24:52,152 creating build/bdist.linux-armv7l/wheel/stereo/image/segmentation 2021-09-16T07:24:52,154 creating build/bdist.linux-armv7l/wheel/stereo/image/segmentation/seg_utils 2021-09-16T07:24:52,155 copying build/lib/stereo/image/segmentation/seg_utils/tissue_seg_pipeline.py -> build/bdist.linux-armv7l/wheel/stereo/image/segmentation/seg_utils 2021-09-16T07:24:52,158 copying build/lib/stereo/image/segmentation/seg_utils/grade.py -> build/bdist.linux-armv7l/wheel/stereo/image/segmentation/seg_utils 2021-09-16T07:24:52,160 copying build/lib/stereo/image/segmentation/seg_utils/cell_infer.py -> build/bdist.linux-armv7l/wheel/stereo/image/segmentation/seg_utils 2021-09-16T07:24:52,163 copying build/lib/stereo/image/segmentation/seg_utils/__init__.py -> build/bdist.linux-armv7l/wheel/stereo/image/segmentation/seg_utils 2021-09-16T07:24:52,165 copying build/lib/stereo/image/segmentation/seg_utils/image.py -> build/bdist.linux-armv7l/wheel/stereo/image/segmentation/seg_utils 2021-09-16T07:24:52,167 copying build/lib/stereo/image/segmentation/seg_utils/find_maxima.py -> build/bdist.linux-armv7l/wheel/stereo/image/segmentation/seg_utils 2021-09-16T07:24:52,170 copying build/lib/stereo/image/segmentation/seg_utils/utils.py -> build/bdist.linux-armv7l/wheel/stereo/image/segmentation/seg_utils 2021-09-16T07:24:52,173 copying build/lib/stereo/image/segmentation/seg_utils/tissue_seg.py -> build/bdist.linux-armv7l/wheel/stereo/image/segmentation/seg_utils 2021-09-16T07:24:52,176 copying build/lib/stereo/image/segmentation/seg_utils/cell_seg_pipeline.py -> build/bdist.linux-armv7l/wheel/stereo/image/segmentation/seg_utils 2021-09-16T07:24:52,179 copying build/lib/stereo/image/segmentation/__init__.py -> build/bdist.linux-armv7l/wheel/stereo/image/segmentation 2021-09-16T07:24:52,181 copying build/lib/stereo/image/segmentation/segment.py -> build/bdist.linux-armv7l/wheel/stereo/image/segmentation 2021-09-16T07:24:52,183 running install_egg_info 2021-09-16T07:24:52,188 Copying stereopy.egg-info to build/bdist.linux-armv7l/wheel/stereopy-0.2.0-py3.7.egg-info 2021-09-16T07:24:52,202 running install_scripts 2021-09-16T07:24:52,340 adding license file "LICENSE" (matched pattern "LICEN[CS]E*") 2021-09-16T07:24:52,345 creating build/bdist.linux-armv7l/wheel/stereopy-0.2.0.dist-info/WHEEL 2021-09-16T07:24:52,348 creating '/tmp/pip-wheel-kiwihu1c/stereopy-0.2.0-py3-none-any.whl' and adding 'build/bdist.linux-armv7l/wheel' to it 2021-09-16T07:24:52,351 adding 'stereo/__init__.py' 2021-09-16T07:24:52,353 adding 'stereo/config.py' 2021-09-16T07:24:52,354 adding 'stereo/log_manager.py' 2021-09-16T07:24:52,356 adding 'stereo/algorithm/__init__.py' 2021-09-16T07:24:52,358 adding 'stereo/algorithm/_louvain.py' 2021-09-16T07:24:52,359 adding 'stereo/algorithm/dim_reduce.py' 2021-09-16T07:24:52,361 adding 'stereo/algorithm/highly_variable_genes.py' 2021-09-16T07:24:52,363 adding 'stereo/algorithm/leiden.py' 2021-09-16T07:24:52,365 adding 'stereo/algorithm/neighbors.py' 2021-09-16T07:24:52,367 adding 'stereo/algorithm/normalization.py' 2021-09-16T07:24:52,368 adding 'stereo/algorithm/phenograph.py' 2021-09-16T07:24:52,370 adding 'stereo/algorithm/spatial_pattern_score.py' 2021-09-16T07:24:52,371 adding 'stereo/algorithm/statistics.py' 2021-09-16T07:24:52,373 adding 'stereo/algorithm/umap.py' 2021-09-16T07:24:52,375 adding 'stereo/algorithm/pysctransform/__init__.py' 2021-09-16T07:24:52,377 adding 'stereo/algorithm/pysctransform/fit.py' 2021-09-16T07:24:52,378 adding 'stereo/algorithm/pysctransform/fit_glmgp.py' 2021-09-16T07:24:52,380 adding 'stereo/algorithm/pysctransform/jax_bfgs.py' 2021-09-16T07:24:52,382 adding 'stereo/algorithm/pysctransform/plotting.py' 2021-09-16T07:24:52,386 adding 'stereo/algorithm/pysctransform/pysctransform.py' 2021-09-16T07:24:52,388 adding 'stereo/algorithm/pysctransform/r_bw.py' 2021-09-16T07:24:52,390 adding 'stereo/core/__init__.py' 2021-09-16T07:24:52,391 adding 'stereo/core/cell.py' 2021-09-16T07:24:52,393 adding 'stereo/core/data.py' 2021-09-16T07:24:52,394 adding 'stereo/core/gene.py' 2021-09-16T07:24:52,398 adding 'stereo/core/st_pipeline.py' 2021-09-16T07:24:52,400 adding 'stereo/core/stereo_exp_data.py' 2021-09-16T07:24:52,401 adding 'stereo/core/stereo_result.py' 2021-09-16T07:24:52,403 adding 'stereo/core/tool_base.py' 2021-09-16T07:24:52,405 adding 'stereo/image/__init__.py' 2021-09-16T07:24:52,406 adding 'stereo/image/pyramid.py' 2021-09-16T07:24:52,408 adding 'stereo/image/segmentation/__init__.py' 2021-09-16T07:24:52,409 adding 'stereo/image/segmentation/segment.py' 2021-09-16T07:24:52,411 adding 'stereo/image/segmentation/seg_utils/__init__.py' 2021-09-16T07:24:52,413 adding 'stereo/image/segmentation/seg_utils/cell_infer.py' 2021-09-16T07:24:52,415 adding 'stereo/image/segmentation/seg_utils/cell_seg_pipeline.py' 2021-09-16T07:24:52,417 adding 'stereo/image/segmentation/seg_utils/find_maxima.py' 2021-09-16T07:24:52,419 adding 'stereo/image/segmentation/seg_utils/grade.py' 2021-09-16T07:24:52,420 adding 'stereo/image/segmentation/seg_utils/image.py' 2021-09-16T07:24:52,421 adding 'stereo/image/segmentation/seg_utils/tissue_seg.py' 2021-09-16T07:24:52,423 adding 'stereo/image/segmentation/seg_utils/tissue_seg_pipeline.py' 2021-09-16T07:24:52,426 adding 'stereo/image/segmentation/seg_utils/utils.py' 2021-09-16T07:24:52,428 adding 'stereo/io/__init__.py' 2021-09-16T07:24:52,430 adding 'stereo/io/gef.py' 2021-09-16T07:24:52,432 adding 'stereo/io/h5ad.py' 2021-09-16T07:24:52,434 adding 'stereo/io/reader.py' 2021-09-16T07:24:52,435 adding 'stereo/io/writer.py' 2021-09-16T07:24:52,437 adding 'stereo/plots/__init__.py' 2021-09-16T07:24:52,439 adding 'stereo/plots/marker_genes.py' 2021-09-16T07:24:52,442 adding 'stereo/plots/plot_collection.py' 2021-09-16T07:24:52,443 adding 'stereo/plots/qc.py' 2021-09-16T07:24:52,446 adding 'stereo/plots/scatter.py' 2021-09-16T07:24:52,447 adding 'stereo/plots/_plot_basic/__init__.py' 2021-09-16T07:24:52,449 adding 'stereo/plots/_plot_basic/get_stereo_data.py' 2021-09-16T07:24:52,451 adding 'stereo/plots/_plot_basic/heatmap_plt.py' 2021-09-16T07:24:52,452 adding 'stereo/plots/_plot_basic/scatter_plt.py' 2021-09-16T07:24:52,454 adding 'stereo/plots/interact_plot/__init__.py' 2021-09-16T07:24:52,455 adding 'stereo/plots/interact_plot/interactive_scatter.py' 2021-09-16T07:24:52,457 adding 'stereo/plots/interact_plot/spatial_cluster.py' 2021-09-16T07:24:52,459 adding 'stereo/preprocess/__init__.py' 2021-09-16T07:24:52,460 adding 'stereo/preprocess/filter.py' 2021-09-16T07:24:52,462 adding 'stereo/preprocess/normalize.py' 2021-09-16T07:24:52,463 adding 'stereo/preprocess/qc.py' 2021-09-16T07:24:52,464 adding 'stereo/preprocess/sc_transform.py' 2021-09-16T07:24:52,466 adding 'stereo/tools/__init__.py' 2021-09-16T07:24:52,469 adding 'stereo/tools/cell_type_anno.py' 2021-09-16T07:24:52,471 adding 'stereo/tools/cluster.py' 2021-09-16T07:24:52,473 adding 'stereo/tools/cluster_new.py' 2021-09-16T07:24:52,474 adding 'stereo/tools/clustering.py' 2021-09-16T07:24:52,476 adding 'stereo/tools/dim_reduce.py' 2021-09-16T07:24:52,478 adding 'stereo/tools/find_markers.py' 2021-09-16T07:24:52,480 adding 'stereo/tools/highly_variable_genes.py' 2021-09-16T07:24:52,481 adding 'stereo/tools/spatial_lag.py' 2021-09-16T07:24:52,483 adding 'stereo/tools/spatial_pattern_score.py' 2021-09-16T07:24:52,484 adding 'stereo/utils/__init__.py' 2021-09-16T07:24:52,486 adding 'stereo/utils/correlation.py' 2021-09-16T07:24:52,487 adding 'stereo/utils/data_helper.py' 2021-09-16T07:24:52,489 adding 'stereo/utils/hvg_utils.py' 2021-09-16T07:24:52,490 adding 'stereo/utils/spmatrix_helper.py' 2021-09-16T07:24:52,493 adding 'stereopy-0.2.0.dist-info/LICENSE' 2021-09-16T07:24:52,494 adding 'stereopy-0.2.0.dist-info/METADATA' 2021-09-16T07:24:52,495 adding 'stereopy-0.2.0.dist-info/WHEEL' 2021-09-16T07:24:52,496 adding 'stereopy-0.2.0.dist-info/top_level.txt' 2021-09-16T07:24:52,497 adding 'stereopy-0.2.0.dist-info/RECORD' 2021-09-16T07:24:52,502 removing build/bdist.linux-armv7l/wheel 2021-09-16T07:24:52,625 Building wheel for stereopy (setup.py): finished with status 'done' 2021-09-16T07:24:52,630 Created wheel for stereopy: filename=stereopy-0.2.0-py3-none-any.whl size=141451 sha256=ae14c63aea986a54218b9fed56b879d0a97082db8a4f6fadc91a319e0ce90c8f 2021-09-16T07:24:52,630 Stored in directory: /tmp/pip-ephem-wheel-cache-4kc837l3/wheels/9e/ee/88/665db17af6784d33f91e6baf5f2f2214e953a53d6b5ae9538e 2021-09-16T07:24:52,642 Successfully built stereopy 2021-09-16T07:24:52,651 Removed build tracker: '/tmp/pip-req-tracker-s4fzqf6q'