2021-09-16T13:31:26,386 Created temporary directory: /tmp/pip-ephem-wheel-cache-cnrygbho
2021-09-16T13:31:26,388 Created temporary directory: /tmp/pip-req-tracker-zlir2nbo
2021-09-16T13:31:26,389 Initialized build tracking at /tmp/pip-req-tracker-zlir2nbo
2021-09-16T13:31:26,389 Created build tracker: /tmp/pip-req-tracker-zlir2nbo
2021-09-16T13:31:26,389 Entered build tracker: /tmp/pip-req-tracker-zlir2nbo
2021-09-16T13:31:26,390 Created temporary directory: /tmp/pip-wheel-k6e668lj
2021-09-16T13:31:26,425 Looking in indexes: https://pypi.org/simple, https://www.piwheels.org/simple
2021-09-16T13:31:26,427 2 location(s) to search for versions of pyslow5:
2021-09-16T13:31:26,427 * https://pypi.org/simple/pyslow5/
2021-09-16T13:31:26,427 * https://www.piwheels.org/simple/pyslow5/
2021-09-16T13:31:26,428 Fetching project page and analyzing links: https://pypi.org/simple/pyslow5/
2021-09-16T13:31:26,428 Getting page https://pypi.org/simple/pyslow5/
2021-09-16T13:31:26,430 Found index url https://pypi.org/simple
2021-09-16T13:31:26,521   Found link https://files.pythonhosted.org/packages/23/0d/38c8cfedd09e7f753347b6ecd717a101c7236daf2ecccb34d44cedc6f125/pyslow5-0.2.0a1.tar.gz#sha256=a72b744ec652ba25eee5060748f8df8a5dc49eee126f48b7682f8d11d6cb434b (from https://pypi.org/simple/pyslow5/), version: 0.2.0a1
2021-09-16T13:31:26,522   Found link https://files.pythonhosted.org/packages/41/8b/eed2c94d79c0af2a69cddfcbc774697dbac35e0a053f7bfd452a629aca4a/pyslow5-0.3.0a1.tar.gz#sha256=5b9a25b33d15d6fba531f82deec6244699baedc2dee29dcd848cecc1555e4e60 (from https://pypi.org/simple/pyslow5/) (requires-python:>=3.4.3), version: 0.3.0a1
2021-09-16T13:31:26,522 Fetching project page and analyzing links: https://www.piwheels.org/simple/pyslow5/
2021-09-16T13:31:26,523 Getting page https://www.piwheels.org/simple/pyslow5/
2021-09-16T13:31:26,523 Found index url https://www.piwheels.org/simple
2021-09-16T13:31:26,646   Skipping link: No binaries permitted for pyslow5: https://www.piwheels.org/simple/pyslow5/pyslow5-0.2.0a1-cp35-cp35m-linux_armv6l.whl#sha256=778a99e023f739e757f3a8ac054aaf245b3c3855b3781ba5f9f17403f1f2f323 (from https://www.piwheels.org/simple/pyslow5/) (requires-python:>=3.4.3)
2021-09-16T13:31:26,647   Skipping link: No binaries permitted for pyslow5: https://www.piwheels.org/simple/pyslow5/pyslow5-0.2.0a1-cp35-cp35m-linux_armv7l.whl#sha256=778a99e023f739e757f3a8ac054aaf245b3c3855b3781ba5f9f17403f1f2f323 (from https://www.piwheels.org/simple/pyslow5/) (requires-python:>=3.4.3)
2021-09-16T13:31:26,647   Skipping link: No binaries permitted for pyslow5: https://www.piwheels.org/simple/pyslow5/pyslow5-0.2.0a1-cp37-cp37m-linux_armv6l.whl#sha256=1e44f77d160ed7f970085e6bbd34c072504cd012441dfab74f56f9115217f60a (from https://www.piwheels.org/simple/pyslow5/) (requires-python:>=3.4.3)
2021-09-16T13:31:26,647   Skipping link: No binaries permitted for pyslow5: https://www.piwheels.org/simple/pyslow5/pyslow5-0.2.0a1-cp37-cp37m-linux_armv7l.whl#sha256=1e44f77d160ed7f970085e6bbd34c072504cd012441dfab74f56f9115217f60a (from https://www.piwheels.org/simple/pyslow5/) (requires-python:>=3.4.3)
2021-09-16T13:31:26,648   Skipping link: No binaries permitted for pyslow5: https://www.piwheels.org/simple/pyslow5/pyslow5-0.2.0a1-cp39-cp39-linux_armv6l.whl#sha256=cde6479a69345d4c2bef55beeb0ab67909d74e8f91a2ec5ef1a0f390aaa3c0dd (from https://www.piwheels.org/simple/pyslow5/) (requires-python:>=3.4.3)
2021-09-16T13:31:26,648   Skipping link: No binaries permitted for pyslow5: https://www.piwheels.org/simple/pyslow5/pyslow5-0.2.0a1-cp39-cp39-linux_armv7l.whl#sha256=cde6479a69345d4c2bef55beeb0ab67909d74e8f91a2ec5ef1a0f390aaa3c0dd (from https://www.piwheels.org/simple/pyslow5/) (requires-python:>=3.4.3)
2021-09-16T13:31:26,648   Skipping link: No binaries permitted for pyslow5: https://www.piwheels.org/simple/pyslow5/pyslow5-0.3.0a1-cp35-cp35m-linux_armv6l.whl#sha256=4125554be93c113129cf73a27c1b57f46b186115dc541cf7bb02b3161800ff06 (from https://www.piwheels.org/simple/pyslow5/) (requires-python:>=3.4.3)
2021-09-16T13:31:26,648   Skipping link: No binaries permitted for pyslow5: https://www.piwheels.org/simple/pyslow5/pyslow5-0.3.0a1-cp35-cp35m-linux_armv7l.whl#sha256=4125554be93c113129cf73a27c1b57f46b186115dc541cf7bb02b3161800ff06 (from https://www.piwheels.org/simple/pyslow5/) (requires-python:>=3.4.3)
2021-09-16T13:31:26,648   Skipping link: No binaries permitted for pyslow5: https://www.piwheels.org/simple/pyslow5/pyslow5-0.3.0a1-cp37-cp37m-linux_armv6l.whl#sha256=f3b339ad5eb12b3614fd8cbfa976565490be6471edb885f1518c44748f7f6e7c (from https://www.piwheels.org/simple/pyslow5/) (requires-python:>=3.4.3)
2021-09-16T13:31:26,649   Skipping link: No binaries permitted for pyslow5: https://www.piwheels.org/simple/pyslow5/pyslow5-0.3.0a1-cp37-cp37m-linux_armv7l.whl#sha256=f3b339ad5eb12b3614fd8cbfa976565490be6471edb885f1518c44748f7f6e7c (from https://www.piwheels.org/simple/pyslow5/) (requires-python:>=3.4.3)
2021-09-16T13:31:26,649 Skipping link: not a file: https://www.piwheels.org/simple/pyslow5/
2021-09-16T13:31:26,649 Skipping link: not a file: https://pypi.org/simple/pyslow5/
2021-09-16T13:31:26,671 Given no hashes to check 1 links for project 'pyslow5': discarding no candidates
2021-09-16T13:31:26,689 Collecting pyslow5==0.3.0a1
2021-09-16T13:31:26,691   Created temporary directory: /tmp/pip-unpack-q_gs707h
2021-09-16T13:31:26,732   Downloading pyslow5-0.3.0a1.tar.gz (223 kB)
2021-09-16T13:31:26,999   Added pyslow5==0.3.0a1 from https://files.pythonhosted.org/packages/41/8b/eed2c94d79c0af2a69cddfcbc774697dbac35e0a053f7bfd452a629aca4a/pyslow5-0.3.0a1.tar.gz#sha256=5b9a25b33d15d6fba531f82deec6244699baedc2dee29dcd848cecc1555e4e60 to build tracker '/tmp/pip-req-tracker-zlir2nbo'
2021-09-16T13:31:27,000     Running setup.py (path:/tmp/pip-wheel-k6e668lj/pyslow5_324c1218ed8b43688824970315d374fa/setup.py) egg_info for package pyslow5
2021-09-16T13:31:27,001     Created temporary directory: /tmp/pip-pip-egg-info-idg66y6x
2021-09-16T13:31:27,001     Running command python setup.py egg_info
2021-09-16T13:31:28,344     running egg_info
2021-09-16T13:31:28,346     creating /tmp/pip-pip-egg-info-idg66y6x/pyslow5.egg-info
2021-09-16T13:31:28,347     writing /tmp/pip-pip-egg-info-idg66y6x/pyslow5.egg-info/PKG-INFO
2021-09-16T13:31:28,350     writing dependency_links to /tmp/pip-pip-egg-info-idg66y6x/pyslow5.egg-info/dependency_links.txt
2021-09-16T13:31:28,352     writing requirements to /tmp/pip-pip-egg-info-idg66y6x/pyslow5.egg-info/requires.txt
2021-09-16T13:31:28,353     writing top-level names to /tmp/pip-pip-egg-info-idg66y6x/pyslow5.egg-info/top_level.txt
2021-09-16T13:31:28,354     writing manifest file '/tmp/pip-pip-egg-info-idg66y6x/pyslow5.egg-info/SOURCES.txt'
2021-09-16T13:31:28,382     reading manifest file '/tmp/pip-pip-egg-info-idg66y6x/pyslow5.egg-info/SOURCES.txt'
2021-09-16T13:31:28,384     reading manifest template 'MANIFEST.in'
2021-09-16T13:31:28,399     adding license file 'LICENSE'
2021-09-16T13:31:28,405     writing manifest file '/tmp/pip-pip-egg-info-idg66y6x/pyslow5.egg-info/SOURCES.txt'
2021-09-16T13:31:28,516   Source in /tmp/pip-wheel-k6e668lj/pyslow5_324c1218ed8b43688824970315d374fa has version 0.3.0a1, which satisfies requirement pyslow5==0.3.0a1 from https://files.pythonhosted.org/packages/41/8b/eed2c94d79c0af2a69cddfcbc774697dbac35e0a053f7bfd452a629aca4a/pyslow5-0.3.0a1.tar.gz#sha256=5b9a25b33d15d6fba531f82deec6244699baedc2dee29dcd848cecc1555e4e60
2021-09-16T13:31:28,517   Removed pyslow5==0.3.0a1 from https://files.pythonhosted.org/packages/41/8b/eed2c94d79c0af2a69cddfcbc774697dbac35e0a053f7bfd452a629aca4a/pyslow5-0.3.0a1.tar.gz#sha256=5b9a25b33d15d6fba531f82deec6244699baedc2dee29dcd848cecc1555e4e60 from build tracker '/tmp/pip-req-tracker-zlir2nbo'
2021-09-16T13:31:28,525 Created temporary directory: /tmp/pip-unpack-qf6ryhwz
2021-09-16T13:31:28,526 Building wheels for collected packages: pyslow5
2021-09-16T13:31:28,531   Created temporary directory: /tmp/pip-wheel-3apccd_w
2021-09-16T13:31:28,531   Building wheel for pyslow5 (setup.py): started
2021-09-16T13:31:28,532   Destination directory: /tmp/pip-wheel-3apccd_w
2021-09-16T13:31:28,532   Running command /usr/bin/python3 -u -c 'import io, os, sys, setuptools, tokenize; sys.argv[0] = '"'"'/tmp/pip-wheel-k6e668lj/pyslow5_324c1218ed8b43688824970315d374fa/setup.py'"'"'; __file__='"'"'/tmp/pip-wheel-k6e668lj/pyslow5_324c1218ed8b43688824970315d374fa/setup.py'"'"';f = getattr(tokenize, '"'"'open'"'"', open)(__file__) if os.path.exists(__file__) else io.StringIO('"'"'from setuptools import setup; setup()'"'"');code = f.read().replace('"'"'\r\n'"'"', '"'"'\n'"'"');f.close();exec(compile(code, __file__, '"'"'exec'"'"'))' bdist_wheel -d /tmp/pip-wheel-3apccd_w
2021-09-16T13:31:29,816   running bdist_wheel
2021-09-16T13:31:29,820   running build
2021-09-16T13:31:29,820   running build_ext
2021-09-16T13:31:29,825   cythoning python/pyslow5.pyx to python/pyslow5.c
2021-09-16T13:31:30,893   /usr/local/lib/python3.9/dist-packages/Cython/Compiler/Main.py:369: FutureWarning: Cython directive 'language_level' not set, using 2 for now (Py2). This will change in a later release! File: /tmp/pip-wheel-k6e668lj/pyslow5_324c1218ed8b43688824970315d374fa/python/pyslow5.pxd
2021-09-16T13:31:30,893     tree = Parsing.p_module(s, pxd, full_module_name)
2021-09-16T13:31:34,685   building 'pyslow5' extension
2021-09-16T13:31:34,686   creating build
2021-09-16T13:31:34,686   creating build/temp.linux-armv7l-3.9
2021-09-16T13:31:34,687   creating build/temp.linux-armv7l-3.9/python
2021-09-16T13:31:34,688   creating build/temp.linux-armv7l-3.9/src
2021-09-16T13:31:34,688   creating build/temp.linux-armv7l-3.9/thirdparty
2021-09-16T13:31:34,689   creating build/temp.linux-armv7l-3.9/thirdparty/streamvbyte
2021-09-16T13:31:34,689   creating build/temp.linux-armv7l-3.9/thirdparty/streamvbyte/src
2021-09-16T13:31:34,690   arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -ffile-prefix-map=/python3.9-3.9.2=. -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -g -ffile-prefix-map=/python3.9-3.9.2=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -Iinclude/ -I/usr/local/lib/python3.9/dist-packages/numpy/core/include -Ithirdparty/streamvbyte/include -I/usr/include/python3.9 -c python/pyslow5.c -o build/temp.linux-armv7l-3.9/python/pyslow5.o -g -Wall -O2 -std=c99
2021-09-16T13:31:35,223   In file included from /usr/local/lib/python3.9/dist-packages/numpy/core/include/numpy/ndarraytypes.h:1969,
2021-09-16T13:31:35,223                    from /usr/local/lib/python3.9/dist-packages/numpy/core/include/numpy/ndarrayobject.h:12,
2021-09-16T13:31:35,224                    from /usr/local/lib/python3.9/dist-packages/numpy/core/include/numpy/arrayobject.h:4,
2021-09-16T13:31:35,224                    from python/pyslow5.c:623:
2021-09-16T13:31:35,224   /usr/local/lib/python3.9/dist-packages/numpy/core/include/numpy/npy_1_7_deprecated_api.h:17:2: warning: #warning "Using deprecated NumPy API, disable it with " "#define NPY_NO_DEPRECATED_API NPY_1_7_API_VERSION" [-Wcpp]
2021-09-16T13:31:35,224      17 | #warning "Using deprecated NumPy API, disable it with " \
2021-09-16T13:31:35,224         |  ^~~~~~~
2021-09-16T13:32:03,443   arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -ffile-prefix-map=/python3.9-3.9.2=. -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -g -ffile-prefix-map=/python3.9-3.9.2=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -Iinclude/ -I/usr/local/lib/python3.9/dist-packages/numpy/core/include -Ithirdparty/streamvbyte/include -I/usr/include/python3.9 -c src/slow5.c -o build/temp.linux-armv7l-3.9/src/slow5.o -g -Wall -O2 -std=c99
2021-09-16T13:32:03,668   src/slow5.c: In function ‘slow5_init’:
2021-09-16T13:32:03,669   src/slow5.c:158:51: warning: comparison of integer expressions of different signedness: ‘uint64_t’ {aka ‘long long unsigned int’} and ‘int’ [-Wsign-compare]
2021-09-16T13:32:03,670     158 |     if ((s5p->meta.start_rec_offset = ftello(fp)) == -1) {
2021-09-16T13:32:03,670         |                                                   ^~
2021-09-16T13:32:03,719   src/slow5.c: In function ‘slow5_get_mem’:
2021-09-16T13:32:03,720   src/slow5.c:2156:49: warning: comparison of integer expressions of different signedness: ‘ssize_t’ {aka ‘int’} and ‘size_t’ {aka ‘unsigned int’} [-Wsign-compare]
2021-09-16T13:32:03,720    2156 |     if (pread(s5p->meta.fd, mem, bytes, offset) != bytes) {
2021-09-16T13:32:03,720         |                                                 ^~
2021-09-16T13:32:03,722   In file included from include/slow5/slow5.h:55,
2021-09-16T13:32:03,722                    from src/slow5.c:40:
2021-09-16T13:32:03,723   include/slow5/slow5_error.h:79:28: warning: format ‘%zu’ expects argument of type ‘size_t’, but argument 5 has type ‘off_t’ {aka ‘long int’} [-Wformat=]
2021-09-16T13:32:03,723      79 | #define SLOW5_ERROR_PREFIX "[%s::ERROR]\033[1;31m "
2021-09-16T13:32:03,723         |                            ^~~~~~~~~~~~~~~~~~~~~~~~
2021-09-16T13:32:03,723   include/slow5/slow5_error.h:116:25: note: in expansion of macro ‘SLOW5_ERROR_PREFIX’
2021-09-16T13:32:03,723     116 |         fprintf(stderr, SLOW5_ERROR_PREFIX msg SLOW5_NO_COLOUR \
2021-09-16T13:32:03,723         |                         ^~~~~~~~~~~~~~~~~~
2021-09-16T13:32:03,723   src/slow5.c:2157:9: note: in expansion of macro ‘SLOW5_ERROR’
2021-09-16T13:32:03,724    2157 |         SLOW5_ERROR("Failed to pread '%zu' bytes at offset '%zu' from slow5 file '%s'.",
2021-09-16T13:32:03,724         |         ^~~~~~~~~~~
2021-09-16T13:32:03,739   src/slow5.c: In function ‘slow5_rec_aux_parse’:
2021-09-16T13:32:03,740   include/slow5/slow5_error.h:79:28: warning: format ‘%llu’ expects argument of type ‘long long unsigned int’, but argument 6 has type ‘size_t’ {aka ‘unsigned int’} [-Wformat=]
2021-09-16T13:32:03,741      79 | #define SLOW5_ERROR_PREFIX "[%s::ERROR]\033[1;31m "
2021-09-16T13:32:03,741         |                            ^~~~~~~~~~~~~~~~~~~~~~~~
2021-09-16T13:32:03,741   include/slow5/slow5_error.h:116:25: note: in expansion of macro ‘SLOW5_ERROR_PREFIX’
2021-09-16T13:32:03,741     116 |         fprintf(stderr, SLOW5_ERROR_PREFIX msg SLOW5_NO_COLOUR \
2021-09-16T13:32:03,741         |                         ^~~~~~~~~~~~~~~~~~
2021-09-16T13:32:03,741   src/slow5.c:2747:17: note: in expansion of macro ‘SLOW5_ERROR’
2021-09-16T13:32:03,741    2747 |                 SLOW5_ERROR("Auxiliary field '%s' is missing in record. At offset '%" PRIu64 "' and record size is '%" PRIu64 "'.", aux_meta->attrs[i], offset, read_size);
2021-09-16T13:32:03,742         |                 ^~~~~~~~~~~
2021-09-16T13:32:13,163   arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -ffile-prefix-map=/python3.9-3.9.2=. -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -g -ffile-prefix-map=/python3.9-3.9.2=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -Iinclude/ -I/usr/local/lib/python3.9/dist-packages/numpy/core/include -Ithirdparty/streamvbyte/include -I/usr/include/python3.9 -c src/slow5_idx.c -o build/temp.linux-armv7l-3.9/src/slow5_idx.o -g -Wall -O2 -std=c99
2021-09-16T13:32:14,177   arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -ffile-prefix-map=/python3.9-3.9.2=. -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -g -ffile-prefix-map=/python3.9-3.9.2=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -Iinclude/ -I/usr/local/lib/python3.9/dist-packages/numpy/core/include -Ithirdparty/streamvbyte/include -I/usr/include/python3.9 -c src/slow5_misc.c -o build/temp.linux-armv7l-3.9/src/slow5_misc.o -g -Wall -O2 -std=c99
2021-09-16T13:32:14,688   arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -ffile-prefix-map=/python3.9-3.9.2=. -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -g -ffile-prefix-map=/python3.9-3.9.2=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -Iinclude/ -I/usr/local/lib/python3.9/dist-packages/numpy/core/include -Ithirdparty/streamvbyte/include -I/usr/include/python3.9 -c src/slow5_press.c -o build/temp.linux-armv7l-3.9/src/slow5_press.o -g -Wall -O2 -std=c99
2021-09-16T13:32:14,899   src/slow5_press.c: In function ‘slow5_fwrite_compress’:
2021-09-16T13:32:14,900   src/slow5_press.c:558:27: warning: comparison of integer expressions of different signedness: ‘ssize_t’ {aka ‘int’} and ‘size_t’ {aka ‘unsigned int’} [-Wsign-compare]
2021-09-16T13:32:14,900     558 |                 if (bytes != size * nmemb || ferror(fp)) {
2021-09-16T13:32:14,900         |                           ^~
2021-09-16T13:32:14,900   src/slow5_press.c:559:31: warning: comparison of integer expressions of different signedness: ‘ssize_t’ {aka ‘int’} and ‘size_t’ {aka ‘unsigned int’} [-Wsign-compare]
2021-09-16T13:32:14,900     559 |                     if (bytes != size * nmemb) {
2021-09-16T13:32:14,900         |                               ^~
2021-09-16T13:32:14,902   src/slow5_press.c: In function ‘slow5_pread_depress_solo’:
2021-09-16T13:32:14,903   src/slow5_press.c:686:47: warning: comparison of integer expressions of different signedness: ‘ssize_t’ {aka ‘int’} and ‘size_t’ {aka ‘unsigned int’} [-Wsign-compare]
2021-09-16T13:32:14,903     686 |     if ((ret = pread(fd, raw, count, offset)) != count) {
2021-09-16T13:32:14,903         |                                               ^~
2021-09-16T13:32:15,931   arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -ffile-prefix-map=/python3.9-3.9.2=. -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -g -ffile-prefix-map=/python3.9-3.9.2=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -Iinclude/ -I/usr/local/lib/python3.9/dist-packages/numpy/core/include -Ithirdparty/streamvbyte/include -I/usr/include/python3.9 -c thirdparty/streamvbyte/src/streamvbyte_decode.c -o build/temp.linux-armv7l-3.9/thirdparty/streamvbyte/src/streamvbyte_decode.o -g -Wall -O2 -std=c99
2021-09-16T13:32:16,030   In file included from thirdparty/streamvbyte/src/streamvbyte_decode.c:25:
2021-09-16T13:32:16,030   thirdparty/streamvbyte/src/streamvbyte_shuffle_tables_decode.h:22:16: warning: ‘shuffleTable’ defined but not used [-Wunused-variable]
2021-09-16T13:32:16,031      22 | static uint8_t shuffleTable[256][16] = {
2021-09-16T13:32:16,031         |                ^~~~~~~~~~~~
2021-09-16T13:32:16,031   thirdparty/streamvbyte/src/streamvbyte_shuffle_tables_decode.h:2:16: warning: ‘lengthTable’ defined but not used [-Wunused-variable]
2021-09-16T13:32:16,031       2 | static uint8_t lengthTable[256] ={
2021-09-16T13:32:16,031         |                ^~~~~~~~~~~
2021-09-16T13:32:16,116   arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -ffile-prefix-map=/python3.9-3.9.2=. -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -g -ffile-prefix-map=/python3.9-3.9.2=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -Iinclude/ -I/usr/local/lib/python3.9/dist-packages/numpy/core/include -Ithirdparty/streamvbyte/include -I/usr/include/python3.9 -c thirdparty/streamvbyte/src/streamvbyte_encode.c -o build/temp.linux-armv7l-3.9/thirdparty/streamvbyte/src/streamvbyte_encode.o -g -Wall -O2 -std=c99
2021-09-16T13:32:16,213   In file included from thirdparty/streamvbyte/src/streamvbyte_encode.c:25:
2021-09-16T13:32:16,213   thirdparty/streamvbyte/src/streamvbyte_shuffle_tables_encode.h:93:16: warning: ‘encodingShuffleTable’ defined but not used [-Wunused-variable]
2021-09-16T13:32:16,213      93 | static uint8_t encodingShuffleTable[256][16] = {
2021-09-16T13:32:16,213         |                ^~~~~~~~~~~~~~~~~~~~
2021-09-16T13:32:16,297   arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -ffile-prefix-map=/python3.9-3.9.2=. -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -g -ffile-prefix-map=/python3.9-3.9.2=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -Iinclude/ -I/usr/local/lib/python3.9/dist-packages/numpy/core/include -Ithirdparty/streamvbyte/include -I/usr/include/python3.9 -c thirdparty/streamvbyte/src/streamvbyte_zigzag.c -o build/temp.linux-armv7l-3.9/thirdparty/streamvbyte/src/streamvbyte_zigzag.o -g -Wall -O2 -std=c99
2021-09-16T13:32:16,465   creating build/lib.linux-armv7l-3.9
2021-09-16T13:32:16,465   arm-linux-gnueabihf-gcc -pthread -shared -Wl,-O1 -Wl,-Bsymbolic-functions -Wl,-z,relro -g -fwrapv -O2 -Wl,-z,relro -g -fwrapv -O2 -g -ffile-prefix-map=/python3.9-3.9.2=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 build/temp.linux-armv7l-3.9/python/pyslow5.o build/temp.linux-armv7l-3.9/src/slow5.o build/temp.linux-armv7l-3.9/src/slow5_idx.o build/temp.linux-armv7l-3.9/src/slow5_misc.o build/temp.linux-armv7l-3.9/src/slow5_press.o build/temp.linux-armv7l-3.9/thirdparty/streamvbyte/src/streamvbyte_decode.o build/temp.linux-armv7l-3.9/thirdparty/streamvbyte/src/streamvbyte_encode.o build/temp.linux-armv7l-3.9/thirdparty/streamvbyte/src/streamvbyte_zigzag.o -L. -lm -lz -o build/lib.linux-armv7l-3.9/pyslow5.cpython-39-arm-linux-gnueabihf.so
2021-09-16T13:32:16,743   installing to build/bdist.linux-armv7l/wheel
2021-09-16T13:32:16,744   running install
2021-09-16T13:32:16,745   running install_lib
2021-09-16T13:32:16,749   creating build/bdist.linux-armv7l
2021-09-16T13:32:16,749   creating build/bdist.linux-armv7l/wheel
2021-09-16T13:32:16,750   copying build/lib.linux-armv7l-3.9/pyslow5.cpython-39-arm-linux-gnueabihf.so -> build/bdist.linux-armv7l/wheel
2021-09-16T13:32:16,796   running install_egg_info
2021-09-16T13:32:16,818   running egg_info
2021-09-16T13:32:16,819   writing pyslow5.egg-info/PKG-INFO
2021-09-16T13:32:16,821   writing dependency_links to pyslow5.egg-info/dependency_links.txt
2021-09-16T13:32:16,823   writing requirements to pyslow5.egg-info/requires.txt
2021-09-16T13:32:16,824   writing top-level names to pyslow5.egg-info/top_level.txt
2021-09-16T13:32:16,850   reading manifest file 'pyslow5.egg-info/SOURCES.txt'
2021-09-16T13:32:16,861   reading manifest template 'MANIFEST.in'
2021-09-16T13:32:16,873   adding license file 'LICENSE'
2021-09-16T13:32:16,880   writing manifest file 'pyslow5.egg-info/SOURCES.txt'
2021-09-16T13:32:16,882   Copying pyslow5.egg-info to build/bdist.linux-armv7l/wheel/pyslow5-0.3.0a1-py3.9.egg-info
2021-09-16T13:32:16,895   running install_scripts
2021-09-16T13:32:16,939   adding license file "LICENSE" (matched pattern "LICEN[CS]E*")
2021-09-16T13:32:16,944   creating build/bdist.linux-armv7l/wheel/pyslow5-0.3.0a1.dist-info/WHEEL
2021-09-16T13:32:16,947   creating '/tmp/pip-wheel-3apccd_w/pyslow5-0.3.0a1-cp39-cp39-linux_armv7l.whl' and adding 'build/bdist.linux-armv7l/wheel' to it
2021-09-16T13:32:17,364   adding 'pyslow5.cpython-39-arm-linux-gnueabihf.so'
2021-09-16T13:32:17,382   adding 'pyslow5-0.3.0a1.dist-info/LICENSE'
2021-09-16T13:32:17,384   adding 'pyslow5-0.3.0a1.dist-info/METADATA'
2021-09-16T13:32:17,385   adding 'pyslow5-0.3.0a1.dist-info/WHEEL'
2021-09-16T13:32:17,386   adding 'pyslow5-0.3.0a1.dist-info/top_level.txt'
2021-09-16T13:32:17,387   adding 'pyslow5-0.3.0a1.dist-info/RECORD'
2021-09-16T13:32:17,400   removing build/bdist.linux-armv7l/wheel
2021-09-16T13:32:17,640   Building wheel for pyslow5 (setup.py): finished with status 'done'
2021-09-16T13:32:17,654   Created wheel for pyslow5: filename=pyslow5-0.3.0a1-cp39-cp39-linux_armv7l.whl size=741413 sha256=c237e6b28164ceb880925c3306fad541230757b454e99331d9e703e174f93044
2021-09-16T13:32:17,654   Stored in directory: /tmp/pip-ephem-wheel-cache-cnrygbho/wheels/59/c1/ac/9164f04b4c3ad628c3b5182ad123c6162a988d624453fe0882
2021-09-16T13:32:17,668 Successfully built pyslow5
2021-09-16T13:32:17,699 Removed build tracker: '/tmp/pip-req-tracker-zlir2nbo'