2021-10-13T09:59:25,819 Created temporary directory: /tmp/pip-ephem-wheel-cache-hvnmom47 2021-10-13T09:59:25,822 Created temporary directory: /tmp/pip-req-tracker-0twd08d7 2021-10-13T09:59:25,822 Initialized build tracking at /tmp/pip-req-tracker-0twd08d7 2021-10-13T09:59:25,822 Created build tracker: /tmp/pip-req-tracker-0twd08d7 2021-10-13T09:59:25,823 Entered build tracker: /tmp/pip-req-tracker-0twd08d7 2021-10-13T09:59:25,823 Created temporary directory: /tmp/pip-wheel-gme4459v 2021-10-13T09:59:25,858 Looking in indexes: https://pypi.org/simple, https://www.piwheels.org/simple 2021-10-13T09:59:25,861 2 location(s) to search for versions of biobb-chemistry: 2021-10-13T09:59:25,861 * https://pypi.org/simple/biobb-chemistry/ 2021-10-13T09:59:25,861 * https://www.piwheels.org/simple/biobb-chemistry/ 2021-10-13T09:59:25,862 Fetching project page and analyzing links: https://pypi.org/simple/biobb-chemistry/ 2021-10-13T09:59:25,862 Getting page https://pypi.org/simple/biobb-chemistry/ 2021-10-13T09:59:25,864 Found index url https://pypi.org/simple 2021-10-13T09:59:25,973 Skipping link: No binaries permitted for biobb-chemistry: https://files.pythonhosted.org/packages/25/ad/8950286fa94728758d773573bd83f75739c869143e17e150a0955c0590ed/biobb_chemistry-1.0.1-py3-none-any.whl#sha256=dcf753aade0b6f92d1d741ff81338686f3da638578314994dc7919442d698384 (from https://pypi.org/simple/biobb-chemistry/) (requires-python:==3.6.*) 2021-10-13T09:59:25,974 Link requires a different Python (3.7.3 not in: '==3.6.*'): https://files.pythonhosted.org/packages/6d/8d/221dd5b91bb4e0c7658b96b907ef5bf54bef875895673580e9e804c50196/biobb_chemistry-1.0.1.tar.gz#sha256=8c10c9a0046df6a539c7f01516315f1e80cc9100a4db2cf6fb13f30a29147354 (from https://pypi.org/simple/biobb-chemistry/) (requires-python:==3.6.*) 2021-10-13T09:59:25,974 Skipping link: No binaries permitted for biobb-chemistry: 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2021-10-13T09:59:25,987 Found link https://files.pythonhosted.org/packages/d2/5b/b2fa4c517df58bb396cc2113537d69cd6167fac6186b6764acb441275021/biobb_chemistry-3.7.0.tar.gz#sha256=a6320dd3f4d34a144a944002beaf4a5324c532756e4d9ea6eee452f6c9a2b388 (from https://pypi.org/simple/biobb-chemistry/) (requires-python:==3.7.*), version: 3.7.0 2021-10-13T09:59:25,987 Fetching project page and analyzing links: https://www.piwheels.org/simple/biobb-chemistry/ 2021-10-13T09:59:25,987 Getting page https://www.piwheels.org/simple/biobb-chemistry/ 2021-10-13T09:59:25,988 Found index url https://www.piwheels.org/simple 2021-10-13T09:59:26,159 Skipping link: No binaries permitted for biobb-chemistry: https://www.piwheels.org/simple/biobb-chemistry/biobb_chemistry-3.0.0-py3-none-any.whl#sha256=7db835bd7488c6ec03a180caf8b8a656aa159529607303414c8d80eecae659e9 (from https://www.piwheels.org/simple/biobb-chemistry/) (requires-python:==3.7.*) 2021-10-13T09:59:26,160 Skipping link: No binaries permitted for biobb-chemistry: https://www.piwheels.org/simple/biobb-chemistry/biobb_chemistry-3.0.1-py3-none-any.whl#sha256=767260e022723e03bf21f94c4f18f5ecd4a26a3085083a989a0e4b20e8b3e466 (from https://www.piwheels.org/simple/biobb-chemistry/) (requires-python:==3.7.*) 2021-10-13T09:59:26,160 Skipping link: No binaries permitted for biobb-chemistry: https://www.piwheels.org/simple/biobb-chemistry/biobb_chemistry-3.0.2-py3-none-any.whl#sha256=37a884b1bca128bb8d932f564a473d44a9691a6d53cdc78eba34eebe11aace56 (from https://www.piwheels.org/simple/biobb-chemistry/) (requires-python:==3.7.*) 2021-10-13T09:59:26,160 Skipping link: No binaries permitted for biobb-chemistry: https://www.piwheels.org/simple/biobb-chemistry/biobb_chemistry-3.5.0-py3-none-any.whl#sha256=b65b946cf89102fb4485b5e71188fc4f0c1cb9e416bb16097c158a8469cf1b6f (from https://www.piwheels.org/simple/biobb-chemistry/) (requires-python:==3.7.*) 2021-10-13T09:59:26,160 Skipping link: No binaries permitted for biobb-chemistry: https://www.piwheels.org/simple/biobb-chemistry/biobb_chemistry-3.6.0-py3-none-any.whl#sha256=50e9c93fd353baa2129bdf776a6c46b4426a182940202dc721a0493cf18bbfa1 (from https://www.piwheels.org/simple/biobb-chemistry/) (requires-python:==3.7.*) 2021-10-13T09:59:26,161 Skipping link: not a file: https://www.piwheels.org/simple/biobb-chemistry/ 2021-10-13T09:59:26,161 Skipping link: not a file: https://pypi.org/simple/biobb-chemistry/ 2021-10-13T09:59:26,176 Given no hashes to check 1 links for project 'biobb-chemistry': discarding no candidates 2021-10-13T09:59:26,191 Collecting biobb-chemistry==3.7.0 2021-10-13T09:59:26,192 Created temporary directory: /tmp/pip-unpack-_o91qxs9 2021-10-13T09:59:26,364 Downloading biobb_chemistry-3.7.0.tar.gz (16 kB) 2021-10-13T09:59:26,455 Added biobb-chemistry==3.7.0 from https://files.pythonhosted.org/packages/d2/5b/b2fa4c517df58bb396cc2113537d69cd6167fac6186b6764acb441275021/biobb_chemistry-3.7.0.tar.gz#sha256=a6320dd3f4d34a144a944002beaf4a5324c532756e4d9ea6eee452f6c9a2b388 to build tracker '/tmp/pip-req-tracker-0twd08d7' 2021-10-13T09:59:26,456 Running setup.py (path:/tmp/pip-wheel-gme4459v/biobb-chemistry_2d7f29e3c8024b5bb2aef34346cbeb65/setup.py) egg_info for package biobb-chemistry 2021-10-13T09:59:26,456 Created temporary directory: /tmp/pip-pip-egg-info-x4nj85hq 2021-10-13T09:59:26,457 Running command python setup.py egg_info 2021-10-13T09:59:27,220 Warning: 'classifiers' should be a list, got type 'tuple' 2021-10-13T09:59:27,338 running egg_info 2021-10-13T09:59:27,340 creating /tmp/pip-pip-egg-info-x4nj85hq/biobb_chemistry.egg-info 2021-10-13T09:59:27,341 writing /tmp/pip-pip-egg-info-x4nj85hq/biobb_chemistry.egg-info/PKG-INFO 2021-10-13T09:59:27,344 writing dependency_links to /tmp/pip-pip-egg-info-x4nj85hq/biobb_chemistry.egg-info/dependency_links.txt 2021-10-13T09:59:27,345 writing entry points to /tmp/pip-pip-egg-info-x4nj85hq/biobb_chemistry.egg-info/entry_points.txt 2021-10-13T09:59:27,347 writing requirements to /tmp/pip-pip-egg-info-x4nj85hq/biobb_chemistry.egg-info/requires.txt 2021-10-13T09:59:27,348 writing top-level names to /tmp/pip-pip-egg-info-x4nj85hq/biobb_chemistry.egg-info/top_level.txt 2021-10-13T09:59:27,349 writing manifest file '/tmp/pip-pip-egg-info-x4nj85hq/biobb_chemistry.egg-info/SOURCES.txt' 2021-10-13T09:59:27,489 reading manifest file '/tmp/pip-pip-egg-info-x4nj85hq/biobb_chemistry.egg-info/SOURCES.txt' 2021-10-13T09:59:27,493 writing manifest file '/tmp/pip-pip-egg-info-x4nj85hq/biobb_chemistry.egg-info/SOURCES.txt' 2021-10-13T09:59:27,556 Source in /tmp/pip-wheel-gme4459v/biobb-chemistry_2d7f29e3c8024b5bb2aef34346cbeb65 has version 3.7.0, which satisfies requirement biobb-chemistry==3.7.0 from https://files.pythonhosted.org/packages/d2/5b/b2fa4c517df58bb396cc2113537d69cd6167fac6186b6764acb441275021/biobb_chemistry-3.7.0.tar.gz#sha256=a6320dd3f4d34a144a944002beaf4a5324c532756e4d9ea6eee452f6c9a2b388 2021-10-13T09:59:27,557 Removed biobb-chemistry==3.7.0 from https://files.pythonhosted.org/packages/d2/5b/b2fa4c517df58bb396cc2113537d69cd6167fac6186b6764acb441275021/biobb_chemistry-3.7.0.tar.gz#sha256=a6320dd3f4d34a144a944002beaf4a5324c532756e4d9ea6eee452f6c9a2b388 from build tracker '/tmp/pip-req-tracker-0twd08d7' 2021-10-13T09:59:27,564 Created temporary directory: /tmp/pip-unpack-_gx6ofrr 2021-10-13T09:59:27,565 Building wheels for collected packages: biobb-chemistry 2021-10-13T09:59:27,570 Created temporary directory: /tmp/pip-wheel-lweoo6wr 2021-10-13T09:59:27,570 Building wheel for biobb-chemistry (setup.py): started 2021-10-13T09:59:27,570 Destination directory: /tmp/pip-wheel-lweoo6wr 2021-10-13T09:59:27,571 Running command /usr/bin/python3 -u -c 'import io, os, sys, setuptools, tokenize; sys.argv[0] = '"'"'/tmp/pip-wheel-gme4459v/biobb-chemistry_2d7f29e3c8024b5bb2aef34346cbeb65/setup.py'"'"'; __file__='"'"'/tmp/pip-wheel-gme4459v/biobb-chemistry_2d7f29e3c8024b5bb2aef34346cbeb65/setup.py'"'"';f = getattr(tokenize, '"'"'open'"'"', open)(__file__) if os.path.exists(__file__) else io.StringIO('"'"'from setuptools import setup; setup()'"'"');code = f.read().replace('"'"'\r\n'"'"', '"'"'\n'"'"');f.close();exec(compile(code, __file__, '"'"'exec'"'"'))' bdist_wheel -d /tmp/pip-wheel-lweoo6wr 2021-10-13T09:59:28,317 Warning: 'classifiers' should be a list, got type 'tuple' 2021-10-13T09:59:28,448 running bdist_wheel 2021-10-13T09:59:28,453 running build 2021-10-13T09:59:28,453 running build_py 2021-10-13T09:59:28,578 creating build 2021-10-13T09:59:28,578 creating build/lib 2021-10-13T09:59:28,579 creating build/lib/biobb_chemistry 2021-10-13T09:59:28,580 copying biobb_chemistry/__init__.py -> build/lib/biobb_chemistry 2021-10-13T09:59:28,582 creating build/lib/biobb_chemistry/babelm 2021-10-13T09:59:28,583 copying biobb_chemistry/babelm/common.py -> build/lib/biobb_chemistry/babelm 2021-10-13T09:59:28,586 copying biobb_chemistry/babelm/babel_minimize.py -> build/lib/biobb_chemistry/babelm 2021-10-13T09:59:28,588 copying biobb_chemistry/babelm/babel_convert.py -> build/lib/biobb_chemistry/babelm 2021-10-13T09:59:28,590 copying biobb_chemistry/babelm/babel_add_hydrogens.py -> build/lib/biobb_chemistry/babelm 2021-10-13T09:59:28,593 copying biobb_chemistry/babelm/__init__.py -> build/lib/biobb_chemistry/babelm 2021-10-13T09:59:28,596 copying biobb_chemistry/babelm/babel_remove_hydrogens.py -> build/lib/biobb_chemistry/babelm 2021-10-13T09:59:28,599 creating build/lib/biobb_chemistry/test 2021-10-13T09:59:28,600 copying biobb_chemistry/test/__init__.py -> build/lib/biobb_chemistry/test 2021-10-13T09:59:28,602 creating build/lib/biobb_chemistry/acpype 2021-10-13T09:59:28,603 copying biobb_chemistry/acpype/acpype_params_gmx.py -> build/lib/biobb_chemistry/acpype 2021-10-13T09:59:28,606 copying biobb_chemistry/acpype/common.py -> build/lib/biobb_chemistry/acpype 2021-10-13T09:59:28,609 copying biobb_chemistry/acpype/acpype_params_ac.py -> build/lib/biobb_chemistry/acpype 2021-10-13T09:59:28,612 copying biobb_chemistry/acpype/acpype_params_gmx_opls.py -> build/lib/biobb_chemistry/acpype 2021-10-13T09:59:28,614 copying biobb_chemistry/acpype/__init__.py -> build/lib/biobb_chemistry/acpype 2021-10-13T09:59:28,616 copying biobb_chemistry/acpype/acpype_params_cns.py -> build/lib/biobb_chemistry/acpype 2021-10-13T09:59:28,620 creating build/lib/biobb_chemistry/ambertools 2021-10-13T09:59:28,620 copying biobb_chemistry/ambertools/common.py -> build/lib/biobb_chemistry/ambertools 2021-10-13T09:59:28,623 copying biobb_chemistry/ambertools/reduce_add_hydrogens.py -> build/lib/biobb_chemistry/ambertools 2021-10-13T09:59:28,625 copying biobb_chemistry/ambertools/reduce_remove_hydrogens.py -> build/lib/biobb_chemistry/ambertools 2021-10-13T09:59:28,628 copying biobb_chemistry/ambertools/__init__.py -> build/lib/biobb_chemistry/ambertools 2021-10-13T09:59:28,639 installing to build/bdist.linux-armv7l/wheel 2021-10-13T09:59:28,640 running install 2021-10-13T09:59:28,641 running install_lib 2021-10-13T09:59:28,646 creating build/bdist.linux-armv7l 2021-10-13T09:59:28,646 creating build/bdist.linux-armv7l/wheel 2021-10-13T09:59:28,648 creating build/bdist.linux-armv7l/wheel/biobb_chemistry 2021-10-13T09:59:28,650 creating build/bdist.linux-armv7l/wheel/biobb_chemistry/babelm 2021-10-13T09:59:28,651 copying build/lib/biobb_chemistry/babelm/common.py -> build/bdist.linux-armv7l/wheel/biobb_chemistry/babelm 2021-10-13T09:59:28,654 copying build/lib/biobb_chemistry/babelm/babel_minimize.py -> build/bdist.linux-armv7l/wheel/biobb_chemistry/babelm 2021-10-13T09:59:28,657 copying build/lib/biobb_chemistry/babelm/babel_convert.py -> build/bdist.linux-armv7l/wheel/biobb_chemistry/babelm 2021-10-13T09:59:28,659 copying build/lib/biobb_chemistry/babelm/babel_add_hydrogens.py -> build/bdist.linux-armv7l/wheel/biobb_chemistry/babelm 2021-10-13T09:59:28,662 copying build/lib/biobb_chemistry/babelm/__init__.py -> build/bdist.linux-armv7l/wheel/biobb_chemistry/babelm 2021-10-13T09:59:28,664 copying build/lib/biobb_chemistry/babelm/babel_remove_hydrogens.py -> build/bdist.linux-armv7l/wheel/biobb_chemistry/babelm 2021-10-13T09:59:28,667 creating build/bdist.linux-armv7l/wheel/biobb_chemistry/test 2021-10-13T09:59:28,668 copying build/lib/biobb_chemistry/test/__init__.py -> build/bdist.linux-armv7l/wheel/biobb_chemistry/test 2021-10-13T09:59:28,670 creating build/bdist.linux-armv7l/wheel/biobb_chemistry/acpype 2021-10-13T09:59:28,671 copying build/lib/biobb_chemistry/acpype/acpype_params_gmx.py -> build/bdist.linux-armv7l/wheel/biobb_chemistry/acpype 2021-10-13T09:59:28,673 copying build/lib/biobb_chemistry/acpype/common.py -> build/bdist.linux-armv7l/wheel/biobb_chemistry/acpype 2021-10-13T09:59:28,676 copying build/lib/biobb_chemistry/acpype/acpype_params_ac.py -> build/bdist.linux-armv7l/wheel/biobb_chemistry/acpype 2021-10-13T09:59:28,679 copying build/lib/biobb_chemistry/acpype/acpype_params_gmx_opls.py -> build/bdist.linux-armv7l/wheel/biobb_chemistry/acpype 2021-10-13T09:59:28,681 copying build/lib/biobb_chemistry/acpype/__init__.py -> build/bdist.linux-armv7l/wheel/biobb_chemistry/acpype 2021-10-13T09:59:28,683 copying build/lib/biobb_chemistry/acpype/acpype_params_cns.py -> build/bdist.linux-armv7l/wheel/biobb_chemistry/acpype 2021-10-13T09:59:28,687 creating build/bdist.linux-armv7l/wheel/biobb_chemistry/ambertools 2021-10-13T09:59:28,687 copying build/lib/biobb_chemistry/ambertools/common.py -> build/bdist.linux-armv7l/wheel/biobb_chemistry/ambertools 2021-10-13T09:59:28,690 copying build/lib/biobb_chemistry/ambertools/reduce_add_hydrogens.py -> build/bdist.linux-armv7l/wheel/biobb_chemistry/ambertools 2021-10-13T09:59:28,692 copying build/lib/biobb_chemistry/ambertools/reduce_remove_hydrogens.py -> build/bdist.linux-armv7l/wheel/biobb_chemistry/ambertools 2021-10-13T09:59:28,695 copying build/lib/biobb_chemistry/ambertools/__init__.py -> build/bdist.linux-armv7l/wheel/biobb_chemistry/ambertools 2021-10-13T09:59:28,697 copying build/lib/biobb_chemistry/__init__.py -> build/bdist.linux-armv7l/wheel/biobb_chemistry 2021-10-13T09:59:28,698 running install_egg_info 2021-10-13T09:59:28,720 running egg_info 2021-10-13T09:59:28,721 writing biobb_chemistry.egg-info/PKG-INFO 2021-10-13T09:59:28,723 writing dependency_links to biobb_chemistry.egg-info/dependency_links.txt 2021-10-13T09:59:28,725 writing entry points to biobb_chemistry.egg-info/entry_points.txt 2021-10-13T09:59:28,726 writing requirements to biobb_chemistry.egg-info/requires.txt 2021-10-13T09:59:28,727 writing top-level names to biobb_chemistry.egg-info/top_level.txt 2021-10-13T09:59:28,734 reading manifest file 'biobb_chemistry.egg-info/SOURCES.txt' 2021-10-13T09:59:28,739 writing manifest file 'biobb_chemistry.egg-info/SOURCES.txt' 2021-10-13T09:59:28,741 Copying biobb_chemistry.egg-info to build/bdist.linux-armv7l/wheel/biobb_chemistry-3.7.0-py3.7.egg-info 2021-10-13T09:59:28,753 running install_scripts 2021-10-13T09:59:28,829 creating build/bdist.linux-armv7l/wheel/biobb_chemistry-3.7.0.dist-info/WHEEL 2021-10-13T09:59:28,831 creating '/tmp/pip-wheel-lweoo6wr/biobb_chemistry-3.7.0-py3-none-any.whl' and adding 'build/bdist.linux-armv7l/wheel' to it 2021-10-13T09:59:28,834 adding 'biobb_chemistry/__init__.py' 2021-10-13T09:59:28,836 adding 'biobb_chemistry/acpype/__init__.py' 2021-10-13T09:59:28,838 adding 'biobb_chemistry/acpype/acpype_params_ac.py' 2021-10-13T09:59:28,840 adding 'biobb_chemistry/acpype/acpype_params_cns.py' 2021-10-13T09:59:28,842 adding 'biobb_chemistry/acpype/acpype_params_gmx.py' 2021-10-13T09:59:28,844 adding 'biobb_chemistry/acpype/acpype_params_gmx_opls.py' 2021-10-13T09:59:28,846 adding 'biobb_chemistry/acpype/common.py' 2021-10-13T09:59:28,848 adding 'biobb_chemistry/ambertools/__init__.py' 2021-10-13T09:59:28,849 adding 'biobb_chemistry/ambertools/common.py' 2021-10-13T09:59:28,851 adding 'biobb_chemistry/ambertools/reduce_add_hydrogens.py' 2021-10-13T09:59:28,853 adding 'biobb_chemistry/ambertools/reduce_remove_hydrogens.py' 2021-10-13T09:59:28,855 adding 'biobb_chemistry/babelm/__init__.py' 2021-10-13T09:59:28,857 adding 'biobb_chemistry/babelm/babel_add_hydrogens.py' 2021-10-13T09:59:28,859 adding 'biobb_chemistry/babelm/babel_convert.py' 2021-10-13T09:59:28,861 adding 'biobb_chemistry/babelm/babel_minimize.py' 2021-10-13T09:59:28,863 adding 'biobb_chemistry/babelm/babel_remove_hydrogens.py' 2021-10-13T09:59:28,865 adding 'biobb_chemistry/babelm/common.py' 2021-10-13T09:59:28,866 adding 'biobb_chemistry/test/__init__.py' 2021-10-13T09:59:28,869 adding 'biobb_chemistry-3.7.0.dist-info/METADATA' 2021-10-13T09:59:28,870 adding 'biobb_chemistry-3.7.0.dist-info/WHEEL' 2021-10-13T09:59:28,871 adding 'biobb_chemistry-3.7.0.dist-info/entry_points.txt' 2021-10-13T09:59:28,872 adding 'biobb_chemistry-3.7.0.dist-info/top_level.txt' 2021-10-13T09:59:28,872 adding 'biobb_chemistry-3.7.0.dist-info/RECORD' 2021-10-13T09:59:28,874 removing build/bdist.linux-armv7l/wheel 2021-10-13T09:59:28,952 Building wheel for biobb-chemistry (setup.py): finished with status 'done' 2021-10-13T09:59:28,954 Created wheel for biobb-chemistry: filename=biobb_chemistry-3.7.0-py3-none-any.whl size=39128 sha256=308f53d55dc7b763c246bcd8577248022c300597bda1388b013b7c7f051d72d9 2021-10-13T09:59:28,955 Stored in directory: /tmp/pip-ephem-wheel-cache-hvnmom47/wheels/6f/4e/87/aabaafae6003a08be969b214f34dce8667953ee19544018c4e 2021-10-13T09:59:28,966 Successfully built biobb-chemistry 2021-10-13T09:59:28,971 Removed build tracker: '/tmp/pip-req-tracker-0twd08d7'