2021-10-15T09:16:51,023 Created temporary directory: /tmp/pip-ephem-wheel-cache-itssuji4
2021-10-15T09:16:51,026 Created temporary directory: /tmp/pip-req-tracker-vhx7b0f9
2021-10-15T09:16:51,026 Initialized build tracking at /tmp/pip-req-tracker-vhx7b0f9
2021-10-15T09:16:51,027 Created build tracker: /tmp/pip-req-tracker-vhx7b0f9
2021-10-15T09:16:51,027 Entered build tracker: /tmp/pip-req-tracker-vhx7b0f9
2021-10-15T09:16:51,027 Created temporary directory: /tmp/pip-wheel-yz077cee
2021-10-15T09:16:51,065 Looking in indexes: https://pypi.org/simple, https://www.piwheels.org/simple
2021-10-15T09:16:51,068 2 location(s) to search for versions of stereopy:
2021-10-15T09:16:51,068 * https://pypi.org/simple/stereopy/
2021-10-15T09:16:51,068 * https://www.piwheels.org/simple/stereopy/
2021-10-15T09:16:51,068 Fetching project page and analyzing links: https://pypi.org/simple/stereopy/
2021-10-15T09:16:51,069 Getting page https://pypi.org/simple/stereopy/
2021-10-15T09:16:51,071 Found index url https://pypi.org/simple
2021-10-15T09:16:51,162   Found link https://files.pythonhosted.org/packages/ba/e8/211af80a80404175bc1fd16031e19187a8f9f30bbbf83ef798b805bcbfa8/stereopy-0.1.tar.gz#sha256=618b0c895b568f307841c4b6e95448eb73cc56ad5df3b5aff48261dc8a4eb24b (from https://pypi.org/simple/stereopy/) (requires-python:>=3.6), version: 0.1
2021-10-15T09:16:51,163   Found link https://files.pythonhosted.org/packages/8f/b9/c6937d46ebf500f64995f52f08cedcb7da142757c370a71646baf6aff8d4/stereopy-0.1.9.tar.gz#sha256=bbc2f792b3615175ceb42333f8d781a4b15ec9d090980da088bbbc757d4cb154 (from https://pypi.org/simple/stereopy/) (requires-python:>=3.6), version: 0.1.9
2021-10-15T09:16:51,163   Found link https://files.pythonhosted.org/packages/54/d5/44997684dbd629b1d1b6456fd36c6c8a469ef33fd42840b3610b3cc130ea/stereopy-0.2.0.tar.gz#sha256=17d9332696faf468d354a87d2ba78027fc3ebd023dcba9f1ebd0c9cff418e99e (from https://pypi.org/simple/stereopy/) (requires-python:>=3.6), version: 0.2.0
2021-10-15T09:16:51,164   Found link https://files.pythonhosted.org/packages/16/63/f1b3f6cc029841596d2ab044092e8f272e68fb17590c72a6acb49fd9522f/stereopy-0.2.1.tar.gz#sha256=0a085a665f59cb2580b0f89333ca29a4d8cd27e26b9f945b683e5c52bb3a04d3 (from https://pypi.org/simple/stereopy/) (requires-python:>=3.6), version: 0.2.1
2021-10-15T09:16:51,164 Fetching project page and analyzing links: https://www.piwheels.org/simple/stereopy/
2021-10-15T09:16:51,164 Getting page https://www.piwheels.org/simple/stereopy/
2021-10-15T09:16:51,165 Found index url https://www.piwheels.org/simple
2021-10-15T09:17:06,198 WARNING: Retrying (Retry(total=4, connect=None, read=None, redirect=None, status=None)) after connection broken by 'ReadTimeoutError("HTTPSConnectionPool(host='www.piwheels.org', port=443): Read timed out. (read timeout=15)")': /simple/stereopy/
2021-10-15T09:17:21,740 WARNING: Retrying (Retry(total=3, connect=None, read=None, redirect=None, status=None)) after connection broken by 'ReadTimeoutError("HTTPSConnectionPool(host='www.piwheels.org', port=443): Read timed out. (read timeout=15)")': /simple/stereopy/
2021-10-15T09:17:27,789 WARNING: Retrying (Retry(total=2, connect=None, read=None, redirect=None, status=None)) after connection broken by 'ProtocolError('Connection aborted.', OSError(0, 'Error'))': /simple/stereopy/
2021-10-15T09:17:34,834 WARNING: Retrying (Retry(total=1, connect=None, read=None, redirect=None, status=None)) after connection broken by 'ProtocolError('Connection aborted.', OSError(0, 'Error'))': /simple/stereopy/
2021-10-15T09:17:53,884 WARNING: Retrying (Retry(total=0, connect=None, read=None, redirect=None, status=None)) after connection broken by 'ReadTimeoutError("HTTPSConnectionPool(host='www.piwheels.org', port=443): Read timed out. (read timeout=15)")': /simple/stereopy/
2021-10-15T09:18:08,929 Could not fetch URL https://www.piwheels.org/simple/stereopy/: connection error: HTTPSConnectionPool(host='www.piwheels.org', port=443): Max retries exceeded with url: /simple/stereopy/ (Caused by ReadTimeoutError("HTTPSConnectionPool(host='www.piwheels.org', port=443): Read timed out. (read timeout=15)")) - skipping
2021-10-15T09:18:08,934 Skipping link: not a file: https://www.piwheels.org/simple/stereopy/
2021-10-15T09:18:08,935 Skipping link: not a file: https://pypi.org/simple/stereopy/
2021-10-15T09:18:08,958 Given no hashes to check 1 links for project 'stereopy': discarding no candidates
2021-10-15T09:18:08,984 Collecting stereopy==0.2.1
2021-10-15T09:18:08,986   Created temporary directory: /tmp/pip-unpack-72vbl7_u
2021-10-15T09:18:10,268   Downloading stereopy-0.2.1.tar.gz (16.9 MB)
2021-10-15T09:18:13,947   Added stereopy==0.2.1 from https://files.pythonhosted.org/packages/16/63/f1b3f6cc029841596d2ab044092e8f272e68fb17590c72a6acb49fd9522f/stereopy-0.2.1.tar.gz#sha256=0a085a665f59cb2580b0f89333ca29a4d8cd27e26b9f945b683e5c52bb3a04d3 to build tracker '/tmp/pip-req-tracker-vhx7b0f9'
2021-10-15T09:18:13,948     Running setup.py (path:/tmp/pip-wheel-yz077cee/stereopy_f1fe1966c57b45fa89be395f36671563/setup.py) egg_info for package stereopy
2021-10-15T09:18:13,949     Created temporary directory: /tmp/pip-pip-egg-info-hb5znoy6
2021-10-15T09:18:13,949     Running command python setup.py egg_info
2021-10-15T09:20:09,421     running egg_info
2021-10-15T09:20:09,424     creating /tmp/pip-pip-egg-info-hb5znoy6/stereopy.egg-info
2021-10-15T09:20:09,425     writing /tmp/pip-pip-egg-info-hb5znoy6/stereopy.egg-info/PKG-INFO
2021-10-15T09:20:09,427     writing dependency_links to /tmp/pip-pip-egg-info-hb5znoy6/stereopy.egg-info/dependency_links.txt
2021-10-15T09:20:09,429     writing requirements to /tmp/pip-pip-egg-info-hb5znoy6/stereopy.egg-info/requires.txt
2021-10-15T09:20:09,430     writing top-level names to /tmp/pip-pip-egg-info-hb5znoy6/stereopy.egg-info/top_level.txt
2021-10-15T09:20:09,431     writing manifest file '/tmp/pip-pip-egg-info-hb5znoy6/stereopy.egg-info/SOURCES.txt'
2021-10-15T09:20:09,651     listing git files failed - pretending there aren't any
2021-10-15T09:20:09,666     reading manifest file '/tmp/pip-pip-egg-info-hb5znoy6/stereopy.egg-info/SOURCES.txt'
2021-10-15T09:20:09,668     adding license file 'LICENSE'
2021-10-15T09:20:09,674     writing manifest file '/tmp/pip-pip-egg-info-hb5znoy6/stereopy.egg-info/SOURCES.txt'
2021-10-15T09:20:09,757   Source in /tmp/pip-wheel-yz077cee/stereopy_f1fe1966c57b45fa89be395f36671563 has version 0.2.1, which satisfies requirement stereopy==0.2.1 from https://files.pythonhosted.org/packages/16/63/f1b3f6cc029841596d2ab044092e8f272e68fb17590c72a6acb49fd9522f/stereopy-0.2.1.tar.gz#sha256=0a085a665f59cb2580b0f89333ca29a4d8cd27e26b9f945b683e5c52bb3a04d3
2021-10-15T09:20:09,758   Removed stereopy==0.2.1 from https://files.pythonhosted.org/packages/16/63/f1b3f6cc029841596d2ab044092e8f272e68fb17590c72a6acb49fd9522f/stereopy-0.2.1.tar.gz#sha256=0a085a665f59cb2580b0f89333ca29a4d8cd27e26b9f945b683e5c52bb3a04d3 from build tracker '/tmp/pip-req-tracker-vhx7b0f9'
2021-10-15T09:20:09,764 Created temporary directory: /tmp/pip-unpack-6hd5jv9t
2021-10-15T09:20:09,765 Building wheels for collected packages: stereopy
2021-10-15T09:20:09,769   Created temporary directory: /tmp/pip-wheel-y9ld4onb
2021-10-15T09:20:09,769   Building wheel for stereopy (setup.py): started
2021-10-15T09:20:09,769   Destination directory: /tmp/pip-wheel-y9ld4onb
2021-10-15T09:20:09,769   Running command /usr/bin/python3 -u -c 'import io, os, sys, setuptools, tokenize; sys.argv[0] = '"'"'/tmp/pip-wheel-yz077cee/stereopy_f1fe1966c57b45fa89be395f36671563/setup.py'"'"'; __file__='"'"'/tmp/pip-wheel-yz077cee/stereopy_f1fe1966c57b45fa89be395f36671563/setup.py'"'"';f = getattr(tokenize, '"'"'open'"'"', open)(__file__) if os.path.exists(__file__) else io.StringIO('"'"'from setuptools import setup; setup()'"'"');code = f.read().replace('"'"'\r\n'"'"', '"'"'\n'"'"');f.close();exec(compile(code, __file__, '"'"'exec'"'"'))' bdist_wheel -d /tmp/pip-wheel-y9ld4onb
2021-10-15T09:20:17,097   running bdist_wheel
2021-10-15T09:20:17,102   running build
2021-10-15T09:20:17,102   running build_py
2021-10-15T09:20:17,236   creating build
2021-10-15T09:20:17,237   creating build/lib
2021-10-15T09:20:17,237   creating build/lib/stereo
2021-10-15T09:20:17,239   copying stereo/log_manager.py -> build/lib/stereo
2021-10-15T09:20:17,241   copying stereo/__init__.py -> build/lib/stereo
2021-10-15T09:20:17,242   copying stereo/config.py -> build/lib/stereo
2021-10-15T09:20:17,245   creating build/lib/stereo/preprocess
2021-10-15T09:20:17,246   copying stereo/preprocess/normalize.py -> build/lib/stereo/preprocess
2021-10-15T09:20:17,248   copying stereo/preprocess/sc_transform.py -> build/lib/stereo/preprocess
2021-10-15T09:20:17,250   copying stereo/preprocess/qc.py -> build/lib/stereo/preprocess
2021-10-15T09:20:17,252   copying stereo/preprocess/filter.py -> build/lib/stereo/preprocess
2021-10-15T09:20:17,255   copying stereo/preprocess/__init__.py -> build/lib/stereo/preprocess
2021-10-15T09:20:17,258   creating build/lib/stereo/tools
2021-10-15T09:20:17,259   copying stereo/tools/cluster_new.py -> build/lib/stereo/tools
2021-10-15T09:20:17,262   copying stereo/tools/clustering.py -> build/lib/stereo/tools
2021-10-15T09:20:17,264   copying stereo/tools/cell_type_anno.py -> build/lib/stereo/tools
2021-10-15T09:20:17,267   copying stereo/tools/dim_reduce.py -> build/lib/stereo/tools
2021-10-15T09:20:17,270   copying stereo/tools/cluster.py -> build/lib/stereo/tools
2021-10-15T09:20:17,273   copying stereo/tools/spatial_pattern_score.py -> build/lib/stereo/tools
2021-10-15T09:20:17,275   copying stereo/tools/highly_variable_genes.py -> build/lib/stereo/tools
2021-10-15T09:20:17,277   copying stereo/tools/__init__.py -> build/lib/stereo/tools
2021-10-15T09:20:17,280   copying stereo/tools/find_markers.py -> build/lib/stereo/tools
2021-10-15T09:20:17,282   copying stereo/tools/spatial_lag.py -> build/lib/stereo/tools
2021-10-15T09:20:17,286   creating build/lib/stereo/image
2021-10-15T09:20:17,287   copying stereo/image/pyramid.py -> build/lib/stereo/image
2021-10-15T09:20:17,289   copying stereo/image/__init__.py -> build/lib/stereo/image
2021-10-15T09:20:17,292   creating build/lib/stereo/core
2021-10-15T09:20:17,293   copying stereo/core/st_pipeline.py -> build/lib/stereo/core
2021-10-15T09:20:17,297   copying stereo/core/stereo_exp_data.py -> build/lib/stereo/core
2021-10-15T09:20:17,300   copying stereo/core/stereo_result.py -> build/lib/stereo/core
2021-10-15T09:20:17,302   copying stereo/core/gene.py -> build/lib/stereo/core
2021-10-15T09:20:17,305   copying stereo/core/cell.py -> build/lib/stereo/core
2021-10-15T09:20:17,307   copying stereo/core/tool_base.py -> build/lib/stereo/core
2021-10-15T09:20:17,310   copying stereo/core/data.py -> build/lib/stereo/core
2021-10-15T09:20:17,312   copying stereo/core/__init__.py -> build/lib/stereo/core
2021-10-15T09:20:17,316   creating build/lib/stereo/algorithm
2021-10-15T09:20:17,317   copying stereo/algorithm/leiden.py -> build/lib/stereo/algorithm
2021-10-15T09:20:17,319   copying stereo/algorithm/neighbors.py -> build/lib/stereo/algorithm
2021-10-15T09:20:17,322   copying stereo/algorithm/umap.py -> build/lib/stereo/algorithm
2021-10-15T09:20:17,325   copying stereo/algorithm/dim_reduce.py -> build/lib/stereo/algorithm
2021-10-15T09:20:17,328   copying stereo/algorithm/statistics.py -> build/lib/stereo/algorithm
2021-10-15T09:20:17,331   copying stereo/algorithm/phenograph.py -> build/lib/stereo/algorithm
2021-10-15T09:20:17,333   copying stereo/algorithm/spatial_pattern_score.py -> build/lib/stereo/algorithm
2021-10-15T09:20:17,335   copying stereo/algorithm/highly_variable_genes.py -> build/lib/stereo/algorithm
2021-10-15T09:20:17,338   copying stereo/algorithm/__init__.py -> build/lib/stereo/algorithm
2021-10-15T09:20:17,340   copying stereo/algorithm/normalization.py -> build/lib/stereo/algorithm
2021-10-15T09:20:17,342   copying stereo/algorithm/_louvain.py -> build/lib/stereo/algorithm
2021-10-15T09:20:17,346   creating build/lib/stereo/io
2021-10-15T09:20:17,347   copying stereo/io/h5ad.py -> build/lib/stereo/io
2021-10-15T09:20:17,350   copying stereo/io/writer.py -> build/lib/stereo/io
2021-10-15T09:20:17,352   copying stereo/io/gef.py -> build/lib/stereo/io
2021-10-15T09:20:17,354   copying stereo/io/__init__.py -> build/lib/stereo/io
2021-10-15T09:20:17,357   copying stereo/io/reader.py -> build/lib/stereo/io
2021-10-15T09:20:17,360   creating build/lib/stereo/plots
2021-10-15T09:20:17,361   copying stereo/plots/qc.py -> build/lib/stereo/plots
2021-10-15T09:20:17,364   copying stereo/plots/marker_genes.py -> build/lib/stereo/plots
2021-10-15T09:20:17,367   copying stereo/plots/plot_collection.py -> build/lib/stereo/plots
2021-10-15T09:20:17,370   copying stereo/plots/__init__.py -> build/lib/stereo/plots
2021-10-15T09:20:17,372   copying stereo/plots/scatter.py -> build/lib/stereo/plots
2021-10-15T09:20:17,375   creating build/lib/stereo/utils
2021-10-15T09:20:17,376   copying stereo/utils/data_helper.py -> build/lib/stereo/utils
2021-10-15T09:20:17,379   copying stereo/utils/spmatrix_helper.py -> build/lib/stereo/utils
2021-10-15T09:20:17,381   copying stereo/utils/hvg_utils.py -> build/lib/stereo/utils
2021-10-15T09:20:17,383   copying stereo/utils/__init__.py -> build/lib/stereo/utils
2021-10-15T09:20:17,385   copying stereo/utils/correlation.py -> build/lib/stereo/utils
2021-10-15T09:20:17,388   creating build/lib/stereo/image/segmentation
2021-10-15T09:20:17,389   copying stereo/image/segmentation/__init__.py -> build/lib/stereo/image/segmentation
2021-10-15T09:20:17,391   copying stereo/image/segmentation/segment.py -> build/lib/stereo/image/segmentation
2021-10-15T09:20:17,394   creating build/lib/stereo/image/segmentation/seg_utils
2021-10-15T09:20:17,395   copying stereo/image/segmentation/seg_utils/cell_seg_pipeline.py -> build/lib/stereo/image/segmentation/seg_utils
2021-10-15T09:20:17,398   copying stereo/image/segmentation/seg_utils/tissue_seg.py -> build/lib/stereo/image/segmentation/seg_utils
2021-10-15T09:20:17,400   copying stereo/image/segmentation/seg_utils/image.py -> build/lib/stereo/image/segmentation/seg_utils
2021-10-15T09:20:17,402   copying stereo/image/segmentation/seg_utils/tissue_seg_pipeline.py -> build/lib/stereo/image/segmentation/seg_utils
2021-10-15T09:20:17,404   copying stereo/image/segmentation/seg_utils/find_maxima.py -> build/lib/stereo/image/segmentation/seg_utils
2021-10-15T09:20:17,407   copying stereo/image/segmentation/seg_utils/__init__.py -> build/lib/stereo/image/segmentation/seg_utils
2021-10-15T09:20:17,409   copying stereo/image/segmentation/seg_utils/grade.py -> build/lib/stereo/image/segmentation/seg_utils
2021-10-15T09:20:17,411   copying stereo/image/segmentation/seg_utils/utils.py -> build/lib/stereo/image/segmentation/seg_utils
2021-10-15T09:20:17,414   copying stereo/image/segmentation/seg_utils/cell_infer.py -> build/lib/stereo/image/segmentation/seg_utils
2021-10-15T09:20:17,417   creating build/lib/stereo/algorithm/pysctransform
2021-10-15T09:20:17,418   copying stereo/algorithm/pysctransform/pysctransform.py -> build/lib/stereo/algorithm/pysctransform
2021-10-15T09:20:17,422   copying stereo/algorithm/pysctransform/r_bw.py -> build/lib/stereo/algorithm/pysctransform
2021-10-15T09:20:17,424   copying stereo/algorithm/pysctransform/jax_bfgs.py -> build/lib/stereo/algorithm/pysctransform
2021-10-15T09:20:17,426   copying stereo/algorithm/pysctransform/fit.py -> build/lib/stereo/algorithm/pysctransform
2021-10-15T09:20:17,428   copying stereo/algorithm/pysctransform/__init__.py -> build/lib/stereo/algorithm/pysctransform
2021-10-15T09:20:17,430   copying stereo/algorithm/pysctransform/fit_glmgp.py -> build/lib/stereo/algorithm/pysctransform
2021-10-15T09:20:17,432   copying stereo/algorithm/pysctransform/plotting.py -> build/lib/stereo/algorithm/pysctransform
2021-10-15T09:20:17,436   creating build/lib/stereo/plots/interact_plot
2021-10-15T09:20:17,437   copying stereo/plots/interact_plot/spatial_cluster.py -> build/lib/stereo/plots/interact_plot
2021-10-15T09:20:17,439   copying stereo/plots/interact_plot/interactive_scatter.py -> build/lib/stereo/plots/interact_plot
2021-10-15T09:20:17,442   copying stereo/plots/interact_plot/__init__.py -> build/lib/stereo/plots/interact_plot
2021-10-15T09:20:17,445   creating build/lib/stereo/plots/_plot_basic
2021-10-15T09:20:17,446   copying stereo/plots/_plot_basic/get_stereo_data.py -> build/lib/stereo/plots/_plot_basic
2021-10-15T09:20:17,448   copying stereo/plots/_plot_basic/heatmap_plt.py -> build/lib/stereo/plots/_plot_basic
2021-10-15T09:20:17,451   copying stereo/plots/_plot_basic/scatter_plt.py -> build/lib/stereo/plots/_plot_basic
2021-10-15T09:20:17,453   copying stereo/plots/_plot_basic/__init__.py -> build/lib/stereo/plots/_plot_basic
2021-10-15T09:20:17,455   running egg_info
2021-10-15T09:20:17,458   writing stereopy.egg-info/PKG-INFO
2021-10-15T09:20:17,461   writing dependency_links to stereopy.egg-info/dependency_links.txt
2021-10-15T09:20:17,463   writing requirements to stereopy.egg-info/requires.txt
2021-10-15T09:20:17,464   writing top-level names to stereopy.egg-info/top_level.txt
2021-10-15T09:20:17,504   listing git files failed - pretending there aren't any
2021-10-15T09:20:17,517   reading manifest file 'stereopy.egg-info/SOURCES.txt'
2021-10-15T09:20:17,531   adding license file 'LICENSE'
2021-10-15T09:20:17,540   writing manifest file 'stereopy.egg-info/SOURCES.txt'
2021-10-15T09:20:17,563   installing to build/bdist.linux-armv7l/wheel
2021-10-15T09:20:17,563   running install
2021-10-15T09:20:17,564   running install_lib
2021-10-15T09:20:17,568   creating build/bdist.linux-armv7l
2021-10-15T09:20:17,568   creating build/bdist.linux-armv7l/wheel
2021-10-15T09:20:17,570   creating build/bdist.linux-armv7l/wheel/stereo
2021-10-15T09:20:17,571   copying build/lib/stereo/log_manager.py -> build/bdist.linux-armv7l/wheel/stereo
2021-10-15T09:20:17,574   creating build/bdist.linux-armv7l/wheel/stereo/preprocess
2021-10-15T09:20:17,575   copying build/lib/stereo/preprocess/normalize.py -> build/bdist.linux-armv7l/wheel/stereo/preprocess
2021-10-15T09:20:17,577   copying build/lib/stereo/preprocess/sc_transform.py -> build/bdist.linux-armv7l/wheel/stereo/preprocess
2021-10-15T09:20:17,579   copying build/lib/stereo/preprocess/qc.py -> build/bdist.linux-armv7l/wheel/stereo/preprocess
2021-10-15T09:20:17,581   copying build/lib/stereo/preprocess/filter.py -> build/bdist.linux-armv7l/wheel/stereo/preprocess
2021-10-15T09:20:17,583   copying build/lib/stereo/preprocess/__init__.py -> build/bdist.linux-armv7l/wheel/stereo/preprocess
2021-10-15T09:20:17,586   creating build/bdist.linux-armv7l/wheel/stereo/tools
2021-10-15T09:20:17,587   copying build/lib/stereo/tools/cluster_new.py -> build/bdist.linux-armv7l/wheel/stereo/tools
2021-10-15T09:20:17,589   copying build/lib/stereo/tools/clustering.py -> build/bdist.linux-armv7l/wheel/stereo/tools
2021-10-15T09:20:17,592   copying build/lib/stereo/tools/cell_type_anno.py -> build/bdist.linux-armv7l/wheel/stereo/tools
2021-10-15T09:20:17,594   copying build/lib/stereo/tools/dim_reduce.py -> build/bdist.linux-armv7l/wheel/stereo/tools
2021-10-15T09:20:17,597   copying build/lib/stereo/tools/cluster.py -> build/bdist.linux-armv7l/wheel/stereo/tools
2021-10-15T09:20:17,600   copying build/lib/stereo/tools/spatial_pattern_score.py -> build/bdist.linux-armv7l/wheel/stereo/tools
2021-10-15T09:20:17,602   copying build/lib/stereo/tools/highly_variable_genes.py -> build/bdist.linux-armv7l/wheel/stereo/tools
2021-10-15T09:20:17,604   copying build/lib/stereo/tools/__init__.py -> build/bdist.linux-armv7l/wheel/stereo/tools
2021-10-15T09:20:17,606   copying build/lib/stereo/tools/find_markers.py -> build/bdist.linux-armv7l/wheel/stereo/tools
2021-10-15T09:20:17,609   copying build/lib/stereo/tools/spatial_lag.py -> build/bdist.linux-armv7l/wheel/stereo/tools
2021-10-15T09:20:17,612   creating build/bdist.linux-armv7l/wheel/stereo/image
2021-10-15T09:20:17,614   creating build/bdist.linux-armv7l/wheel/stereo/image/segmentation
2021-10-15T09:20:17,615   copying build/lib/stereo/image/segmentation/__init__.py -> build/bdist.linux-armv7l/wheel/stereo/image/segmentation
2021-10-15T09:20:17,617   copying build/lib/stereo/image/segmentation/segment.py -> build/bdist.linux-armv7l/wheel/stereo/image/segmentation
2021-10-15T09:20:17,620   creating build/bdist.linux-armv7l/wheel/stereo/image/segmentation/seg_utils
2021-10-15T09:20:17,621   copying build/lib/stereo/image/segmentation/seg_utils/cell_seg_pipeline.py -> build/bdist.linux-armv7l/wheel/stereo/image/segmentation/seg_utils
2021-10-15T09:20:17,624   copying build/lib/stereo/image/segmentation/seg_utils/tissue_seg.py -> build/bdist.linux-armv7l/wheel/stereo/image/segmentation/seg_utils
2021-10-15T09:20:17,626   copying build/lib/stereo/image/segmentation/seg_utils/image.py -> build/bdist.linux-armv7l/wheel/stereo/image/segmentation/seg_utils
2021-10-15T09:20:17,629   copying build/lib/stereo/image/segmentation/seg_utils/tissue_seg_pipeline.py -> build/bdist.linux-armv7l/wheel/stereo/image/segmentation/seg_utils
2021-10-15T09:20:17,631   copying build/lib/stereo/image/segmentation/seg_utils/find_maxima.py -> build/bdist.linux-armv7l/wheel/stereo/image/segmentation/seg_utils
2021-10-15T09:20:17,633   copying build/lib/stereo/image/segmentation/seg_utils/__init__.py -> build/bdist.linux-armv7l/wheel/stereo/image/segmentation/seg_utils
2021-10-15T09:20:17,635   copying build/lib/stereo/image/segmentation/seg_utils/grade.py -> build/bdist.linux-armv7l/wheel/stereo/image/segmentation/seg_utils
2021-10-15T09:20:17,637   copying build/lib/stereo/image/segmentation/seg_utils/utils.py -> build/bdist.linux-armv7l/wheel/stereo/image/segmentation/seg_utils
2021-10-15T09:20:17,640   copying build/lib/stereo/image/segmentation/seg_utils/cell_infer.py -> build/bdist.linux-armv7l/wheel/stereo/image/segmentation/seg_utils
2021-10-15T09:20:17,643   copying build/lib/stereo/image/pyramid.py -> build/bdist.linux-armv7l/wheel/stereo/image
2021-10-15T09:20:17,645   copying build/lib/stereo/image/__init__.py -> build/bdist.linux-armv7l/wheel/stereo/image
2021-10-15T09:20:17,647   creating build/bdist.linux-armv7l/wheel/stereo/core
2021-10-15T09:20:17,648   copying build/lib/stereo/core/st_pipeline.py -> build/bdist.linux-armv7l/wheel/stereo/core
2021-10-15T09:20:17,652   copying build/lib/stereo/core/stereo_exp_data.py -> build/bdist.linux-armv7l/wheel/stereo/core
2021-10-15T09:20:17,654   copying build/lib/stereo/core/stereo_result.py -> build/bdist.linux-armv7l/wheel/stereo/core
2021-10-15T09:20:17,656   copying build/lib/stereo/core/gene.py -> build/bdist.linux-armv7l/wheel/stereo/core
2021-10-15T09:20:17,658   copying build/lib/stereo/core/cell.py -> build/bdist.linux-armv7l/wheel/stereo/core
2021-10-15T09:20:17,660   copying build/lib/stereo/core/tool_base.py -> build/bdist.linux-armv7l/wheel/stereo/core
2021-10-15T09:20:17,663   copying build/lib/stereo/core/data.py -> build/bdist.linux-armv7l/wheel/stereo/core
2021-10-15T09:20:17,665   copying build/lib/stereo/core/__init__.py -> build/bdist.linux-armv7l/wheel/stereo/core
2021-10-15T09:20:17,668   creating build/bdist.linux-armv7l/wheel/stereo/algorithm
2021-10-15T09:20:17,669   copying build/lib/stereo/algorithm/leiden.py -> build/bdist.linux-armv7l/wheel/stereo/algorithm
2021-10-15T09:20:17,671   copying build/lib/stereo/algorithm/neighbors.py -> build/bdist.linux-armv7l/wheel/stereo/algorithm
2021-10-15T09:20:17,674   copying build/lib/stereo/algorithm/umap.py -> build/bdist.linux-armv7l/wheel/stereo/algorithm
2021-10-15T09:20:17,676   copying build/lib/stereo/algorithm/dim_reduce.py -> build/bdist.linux-armv7l/wheel/stereo/algorithm
2021-10-15T09:20:17,678   copying build/lib/stereo/algorithm/statistics.py -> build/bdist.linux-armv7l/wheel/stereo/algorithm
2021-10-15T09:20:17,681   copying build/lib/stereo/algorithm/phenograph.py -> build/bdist.linux-armv7l/wheel/stereo/algorithm
2021-10-15T09:20:17,683   copying build/lib/stereo/algorithm/spatial_pattern_score.py -> build/bdist.linux-armv7l/wheel/stereo/algorithm
2021-10-15T09:20:17,685   copying build/lib/stereo/algorithm/highly_variable_genes.py -> build/bdist.linux-armv7l/wheel/stereo/algorithm
2021-10-15T09:20:17,688   creating build/bdist.linux-armv7l/wheel/stereo/algorithm/pysctransform
2021-10-15T09:20:17,689   copying build/lib/stereo/algorithm/pysctransform/pysctransform.py -> build/bdist.linux-armv7l/wheel/stereo/algorithm/pysctransform
2021-10-15T09:20:17,693   copying build/lib/stereo/algorithm/pysctransform/r_bw.py -> build/bdist.linux-armv7l/wheel/stereo/algorithm/pysctransform
2021-10-15T09:20:17,695   copying build/lib/stereo/algorithm/pysctransform/jax_bfgs.py -> build/bdist.linux-armv7l/wheel/stereo/algorithm/pysctransform
2021-10-15T09:20:17,697   copying build/lib/stereo/algorithm/pysctransform/fit.py -> build/bdist.linux-armv7l/wheel/stereo/algorithm/pysctransform
2021-10-15T09:20:17,700   copying build/lib/stereo/algorithm/pysctransform/__init__.py -> build/bdist.linux-armv7l/wheel/stereo/algorithm/pysctransform
2021-10-15T09:20:17,702   copying build/lib/stereo/algorithm/pysctransform/fit_glmgp.py -> build/bdist.linux-armv7l/wheel/stereo/algorithm/pysctransform
2021-10-15T09:20:17,704   copying build/lib/stereo/algorithm/pysctransform/plotting.py -> build/bdist.linux-armv7l/wheel/stereo/algorithm/pysctransform
2021-10-15T09:20:17,706   copying build/lib/stereo/algorithm/__init__.py -> build/bdist.linux-armv7l/wheel/stereo/algorithm
2021-10-15T09:20:17,708   copying build/lib/stereo/algorithm/normalization.py -> build/bdist.linux-armv7l/wheel/stereo/algorithm
2021-10-15T09:20:17,710   copying build/lib/stereo/algorithm/_louvain.py -> build/bdist.linux-armv7l/wheel/stereo/algorithm
2021-10-15T09:20:17,713   creating build/bdist.linux-armv7l/wheel/stereo/io
2021-10-15T09:20:17,714   copying build/lib/stereo/io/h5ad.py -> build/bdist.linux-armv7l/wheel/stereo/io
2021-10-15T09:20:17,717   copying build/lib/stereo/io/writer.py -> build/bdist.linux-armv7l/wheel/stereo/io
2021-10-15T09:20:17,718   copying build/lib/stereo/io/gef.py -> build/bdist.linux-armv7l/wheel/stereo/io
2021-10-15T09:20:17,721   copying build/lib/stereo/io/__init__.py -> build/bdist.linux-armv7l/wheel/stereo/io
2021-10-15T09:20:17,723   copying build/lib/stereo/io/reader.py -> build/bdist.linux-armv7l/wheel/stereo/io
2021-10-15T09:20:17,726   copying build/lib/stereo/__init__.py -> build/bdist.linux-armv7l/wheel/stereo
2021-10-15T09:20:17,729   creating build/bdist.linux-armv7l/wheel/stereo/plots
2021-10-15T09:20:17,730   creating build/bdist.linux-armv7l/wheel/stereo/plots/interact_plot
2021-10-15T09:20:17,731   copying build/lib/stereo/plots/interact_plot/spatial_cluster.py -> build/bdist.linux-armv7l/wheel/stereo/plots/interact_plot
2021-10-15T09:20:17,734   copying build/lib/stereo/plots/interact_plot/interactive_scatter.py -> build/bdist.linux-armv7l/wheel/stereo/plots/interact_plot
2021-10-15T09:20:17,736   copying build/lib/stereo/plots/interact_plot/__init__.py -> build/bdist.linux-armv7l/wheel/stereo/plots/interact_plot
2021-10-15T09:20:17,738   copying build/lib/stereo/plots/qc.py -> build/bdist.linux-armv7l/wheel/stereo/plots
2021-10-15T09:20:17,741   copying build/lib/stereo/plots/marker_genes.py -> build/bdist.linux-armv7l/wheel/stereo/plots
2021-10-15T09:20:17,744   copying build/lib/stereo/plots/plot_collection.py -> build/bdist.linux-armv7l/wheel/stereo/plots
2021-10-15T09:20:17,746   copying build/lib/stereo/plots/__init__.py -> build/bdist.linux-armv7l/wheel/stereo/plots
2021-10-15T09:20:17,749   creating build/bdist.linux-armv7l/wheel/stereo/plots/_plot_basic
2021-10-15T09:20:17,750   copying build/lib/stereo/plots/_plot_basic/get_stereo_data.py -> build/bdist.linux-armv7l/wheel/stereo/plots/_plot_basic
2021-10-15T09:20:17,752   copying build/lib/stereo/plots/_plot_basic/heatmap_plt.py -> build/bdist.linux-armv7l/wheel/stereo/plots/_plot_basic
2021-10-15T09:20:17,755   copying build/lib/stereo/plots/_plot_basic/scatter_plt.py -> build/bdist.linux-armv7l/wheel/stereo/plots/_plot_basic
2021-10-15T09:20:17,757   copying build/lib/stereo/plots/_plot_basic/__init__.py -> build/bdist.linux-armv7l/wheel/stereo/plots/_plot_basic
2021-10-15T09:20:17,759   copying build/lib/stereo/plots/scatter.py -> build/bdist.linux-armv7l/wheel/stereo/plots
2021-10-15T09:20:17,762   copying build/lib/stereo/config.py -> build/bdist.linux-armv7l/wheel/stereo
2021-10-15T09:20:17,765   creating build/bdist.linux-armv7l/wheel/stereo/utils
2021-10-15T09:20:17,766   copying build/lib/stereo/utils/data_helper.py -> build/bdist.linux-armv7l/wheel/stereo/utils
2021-10-15T09:20:17,769   copying build/lib/stereo/utils/spmatrix_helper.py -> build/bdist.linux-armv7l/wheel/stereo/utils
2021-10-15T09:20:17,771   copying build/lib/stereo/utils/hvg_utils.py -> build/bdist.linux-armv7l/wheel/stereo/utils
2021-10-15T09:20:17,774   copying build/lib/stereo/utils/__init__.py -> build/bdist.linux-armv7l/wheel/stereo/utils
2021-10-15T09:20:17,776   copying build/lib/stereo/utils/correlation.py -> build/bdist.linux-armv7l/wheel/stereo/utils
2021-10-15T09:20:17,778   running install_egg_info
2021-10-15T09:20:17,783   Copying stereopy.egg-info to build/bdist.linux-armv7l/wheel/stereopy-0.2.1-py3.7.egg-info
2021-10-15T09:20:17,795   running install_scripts
2021-10-15T09:20:17,935   adding license file "LICENSE" (matched pattern "LICEN[CS]E*")
2021-10-15T09:20:17,940   creating build/bdist.linux-armv7l/wheel/stereopy-0.2.1.dist-info/WHEEL
2021-10-15T09:20:17,943   creating '/tmp/pip-wheel-y9ld4onb/stereopy-0.2.1-py3-none-any.whl' and adding 'build/bdist.linux-armv7l/wheel' to it
2021-10-15T09:20:17,946   adding 'stereo/__init__.py'
2021-10-15T09:20:17,948   adding 'stereo/config.py'
2021-10-15T09:20:17,949   adding 'stereo/log_manager.py'
2021-10-15T09:20:17,951   adding 'stereo/algorithm/__init__.py'
2021-10-15T09:20:17,953   adding 'stereo/algorithm/_louvain.py'
2021-10-15T09:20:17,954   adding 'stereo/algorithm/dim_reduce.py'
2021-10-15T09:20:17,956   adding 'stereo/algorithm/highly_variable_genes.py'
2021-10-15T09:20:17,958   adding 'stereo/algorithm/leiden.py'
2021-10-15T09:20:17,960   adding 'stereo/algorithm/neighbors.py'
2021-10-15T09:20:17,962   adding 'stereo/algorithm/normalization.py'
2021-10-15T09:20:17,963   adding 'stereo/algorithm/phenograph.py'
2021-10-15T09:20:17,964   adding 'stereo/algorithm/spatial_pattern_score.py'
2021-10-15T09:20:17,966   adding 'stereo/algorithm/statistics.py'
2021-10-15T09:20:17,967   adding 'stereo/algorithm/umap.py'
2021-10-15T09:20:17,969   adding 'stereo/algorithm/pysctransform/__init__.py'
2021-10-15T09:20:17,971   adding 'stereo/algorithm/pysctransform/fit.py'
2021-10-15T09:20:17,972   adding 'stereo/algorithm/pysctransform/fit_glmgp.py'
2021-10-15T09:20:17,974   adding 'stereo/algorithm/pysctransform/jax_bfgs.py'
2021-10-15T09:20:17,975   adding 'stereo/algorithm/pysctransform/plotting.py'
2021-10-15T09:20:17,980   adding 'stereo/algorithm/pysctransform/pysctransform.py'
2021-10-15T09:20:17,981   adding 'stereo/algorithm/pysctransform/r_bw.py'
2021-10-15T09:20:17,983   adding 'stereo/core/__init__.py'
2021-10-15T09:20:17,985   adding 'stereo/core/cell.py'
2021-10-15T09:20:17,986   adding 'stereo/core/data.py'
2021-10-15T09:20:17,987   adding 'stereo/core/gene.py'
2021-10-15T09:20:17,991   adding 'stereo/core/st_pipeline.py'
2021-10-15T09:20:17,993   adding 'stereo/core/stereo_exp_data.py'
2021-10-15T09:20:17,994   adding 'stereo/core/stereo_result.py'
2021-10-15T09:20:17,996   adding 'stereo/core/tool_base.py'
2021-10-15T09:20:17,998   adding 'stereo/image/__init__.py'
2021-10-15T09:20:18,000   adding 'stereo/image/pyramid.py'
2021-10-15T09:20:18,001   adding 'stereo/image/segmentation/__init__.py'
2021-10-15T09:20:18,003   adding 'stereo/image/segmentation/segment.py'
2021-10-15T09:20:18,005   adding 'stereo/image/segmentation/seg_utils/__init__.py'
2021-10-15T09:20:18,007   adding 'stereo/image/segmentation/seg_utils/cell_infer.py'
2021-10-15T09:20:18,009   adding 'stereo/image/segmentation/seg_utils/cell_seg_pipeline.py'
2021-10-15T09:20:18,011   adding 'stereo/image/segmentation/seg_utils/find_maxima.py'
2021-10-15T09:20:18,013   adding 'stereo/image/segmentation/seg_utils/grade.py'
2021-10-15T09:20:18,014   adding 'stereo/image/segmentation/seg_utils/image.py'
2021-10-15T09:20:18,015   adding 'stereo/image/segmentation/seg_utils/tissue_seg.py'
2021-10-15T09:20:18,017   adding 'stereo/image/segmentation/seg_utils/tissue_seg_pipeline.py'
2021-10-15T09:20:18,020   adding 'stereo/image/segmentation/seg_utils/utils.py'
2021-10-15T09:20:18,022   adding 'stereo/io/__init__.py'
2021-10-15T09:20:18,024   adding 'stereo/io/gef.py'
2021-10-15T09:20:18,026   adding 'stereo/io/h5ad.py'
2021-10-15T09:20:18,028   adding 'stereo/io/reader.py'
2021-10-15T09:20:18,030   adding 'stereo/io/writer.py'
2021-10-15T09:20:18,032   adding 'stereo/plots/__init__.py'
2021-10-15T09:20:18,034   adding 'stereo/plots/marker_genes.py'
2021-10-15T09:20:18,036   adding 'stereo/plots/plot_collection.py'
2021-10-15T09:20:18,037   adding 'stereo/plots/qc.py'
2021-10-15T09:20:18,040   adding 'stereo/plots/scatter.py'
2021-10-15T09:20:18,042   adding 'stereo/plots/_plot_basic/__init__.py'
2021-10-15T09:20:18,043   adding 'stereo/plots/_plot_basic/get_stereo_data.py'
2021-10-15T09:20:18,045   adding 'stereo/plots/_plot_basic/heatmap_plt.py'
2021-10-15T09:20:18,047   adding 'stereo/plots/_plot_basic/scatter_plt.py'
2021-10-15T09:20:18,049   adding 'stereo/plots/interact_plot/__init__.py'
2021-10-15T09:20:18,051   adding 'stereo/plots/interact_plot/interactive_scatter.py'
2021-10-15T09:20:18,052   adding 'stereo/plots/interact_plot/spatial_cluster.py'
2021-10-15T09:20:18,054   adding 'stereo/preprocess/__init__.py'
2021-10-15T09:20:18,056   adding 'stereo/preprocess/filter.py'
2021-10-15T09:20:18,058   adding 'stereo/preprocess/normalize.py'
2021-10-15T09:20:18,059   adding 'stereo/preprocess/qc.py'
2021-10-15T09:20:18,061   adding 'stereo/preprocess/sc_transform.py'
2021-10-15T09:20:18,063   adding 'stereo/tools/__init__.py'
2021-10-15T09:20:18,065   adding 'stereo/tools/cell_type_anno.py'
2021-10-15T09:20:18,067   adding 'stereo/tools/cluster.py'
2021-10-15T09:20:18,069   adding 'stereo/tools/cluster_new.py'
2021-10-15T09:20:18,071   adding 'stereo/tools/clustering.py'
2021-10-15T09:20:18,073   adding 'stereo/tools/dim_reduce.py'
2021-10-15T09:20:18,074   adding 'stereo/tools/find_markers.py'
2021-10-15T09:20:18,076   adding 'stereo/tools/highly_variable_genes.py'
2021-10-15T09:20:18,078   adding 'stereo/tools/spatial_lag.py'
2021-10-15T09:20:18,079   adding 'stereo/tools/spatial_pattern_score.py'
2021-10-15T09:20:18,081   adding 'stereo/utils/__init__.py'
2021-10-15T09:20:18,082   adding 'stereo/utils/correlation.py'
2021-10-15T09:20:18,084   adding 'stereo/utils/data_helper.py'
2021-10-15T09:20:18,085   adding 'stereo/utils/hvg_utils.py'
2021-10-15T09:20:18,087   adding 'stereo/utils/spmatrix_helper.py'
2021-10-15T09:20:18,089   adding 'stereopy-0.2.1.dist-info/LICENSE'
2021-10-15T09:20:18,091   adding 'stereopy-0.2.1.dist-info/METADATA'
2021-10-15T09:20:18,092   adding 'stereopy-0.2.1.dist-info/WHEEL'
2021-10-15T09:20:18,093   adding 'stereopy-0.2.1.dist-info/top_level.txt'
2021-10-15T09:20:18,094   adding 'stereopy-0.2.1.dist-info/RECORD'
2021-10-15T09:20:18,099   removing build/bdist.linux-armv7l/wheel
2021-10-15T09:20:18,220   Building wheel for stereopy (setup.py): finished with status 'done'
2021-10-15T09:20:18,224   Created wheel for stereopy: filename=stereopy-0.2.1-py3-none-any.whl size=142002 sha256=cf71efeac7cafa9bff7c3a22c48c80c49cdd789556030cddb0f42576b578642b
2021-10-15T09:20:18,225   Stored in directory: /tmp/pip-ephem-wheel-cache-itssuji4/wheels/b3/56/9a/8bdf9e4bca05023627006e416cf01f472843aa2ef161d92cdd
2021-10-15T09:20:18,237 Successfully built stereopy
2021-10-15T09:20:18,245 Removed build tracker: '/tmp/pip-req-tracker-vhx7b0f9'