2021-10-15T14:38:50,869 Created temporary directory: /tmp/pip-ephem-wheel-cache-2z_r_59a
2021-10-15T14:38:50,872 Created temporary directory: /tmp/pip-req-tracker-8n44hbdw
2021-10-15T14:38:50,872 Initialized build tracking at /tmp/pip-req-tracker-8n44hbdw
2021-10-15T14:38:50,873 Created build tracker: /tmp/pip-req-tracker-8n44hbdw
2021-10-15T14:38:50,873 Entered build tracker: /tmp/pip-req-tracker-8n44hbdw
2021-10-15T14:38:50,873 Created temporary directory: /tmp/pip-wheel-qgaqz0lr
2021-10-15T14:38:50,910 Looking in indexes: https://pypi.org/simple, https://www.piwheels.org/simple
2021-10-15T14:38:50,913 2 location(s) to search for versions of cidc-ngs-pipeline-api:
2021-10-15T14:38:50,913 * https://pypi.org/simple/cidc-ngs-pipeline-api/
2021-10-15T14:38:50,913 * https://www.piwheels.org/simple/cidc-ngs-pipeline-api/
2021-10-15T14:38:50,913 Fetching project page and analyzing links: https://pypi.org/simple/cidc-ngs-pipeline-api/
2021-10-15T14:38:50,914 Getting page https://pypi.org/simple/cidc-ngs-pipeline-api/
2021-10-15T14:38:50,916 Found index url https://pypi.org/simple
2021-10-15T14:38:51,021   Found link https://files.pythonhosted.org/packages/eb/72/048ba0fefabe1a6113dda9f0dd2ef49e48baa3a2192a383fe0f7f81c301b/cidc_ngs_pipeline_api-0.1.0.tar.gz#sha256=329a3c40250acbbac0c692c3c54241917546105fd227df9994c1fcf2da42bff5 (from https://pypi.org/simple/cidc-ngs-pipeline-api/) (requires-python:>=3.6), version: 0.1.0
2021-10-15T14:38:51,022   Found link https://files.pythonhosted.org/packages/9c/a5/33b4625004f55b0de43870d1ed4d15a1a006f7007e8653c70966254a7ea7/cidc_ngs_pipeline_api-0.1.1.tar.gz#sha256=0e0f6e94e05b22145c5a47573bfd5d58449bf7e4f87cf552b7cadfdabf9863ea (from https://pypi.org/simple/cidc-ngs-pipeline-api/) (requires-python:>=3.6), version: 0.1.1
2021-10-15T14:38:51,022   Found link https://files.pythonhosted.org/packages/53/7f/eea842e5d587200410294d40f7917fc2c62dee8956547bfb89bafb00d6e7/cidc_ngs_pipeline_api-0.1.2.tar.gz#sha256=79c4b9690bec471648278566682a9f09ffc71a2c5eb57e57741ea359f87ab4af (from https://pypi.org/simple/cidc-ngs-pipeline-api/) (requires-python:>=3.6), version: 0.1.2
2021-10-15T14:38:51,023   Found link https://files.pythonhosted.org/packages/28/b3/a8ee852b1bec956480c6c975bf61b08be23c22abc84c0111b1312d528dc1/cidc_ngs_pipeline_api-0.1.3.tar.gz#sha256=c2a9197d8f020fed8914b0c6e505d7793ba82cde83a9d0746631a735efb93801 (from https://pypi.org/simple/cidc-ngs-pipeline-api/) (requires-python:>=3.6), version: 0.1.3
2021-10-15T14:38:51,024   Found link https://files.pythonhosted.org/packages/bf/42/6b9fc81f0540d796a21cfae33bf3cb1607a962997764dfd9bc97ecadd002/cidc_ngs_pipeline_api-0.1.4.tar.gz#sha256=cfa762fbd4acceadc1a60134ac0828d263ea97f3e55cb2a4ba4de060fb7682d6 (from https://pypi.org/simple/cidc-ngs-pipeline-api/) (requires-python:>=3.6), version: 0.1.4
2021-10-15T14:38:51,024   Found link https://files.pythonhosted.org/packages/16/30/28d09cf5bea6cee5bab4e2c4a0105648372be2e13cf85735c6dd0da2ac73/cidc_ngs_pipeline_api-0.1.5.tar.gz#sha256=7f1918b7ab1eff39c43b99f54bd80fe136257ded8883022a86f4f85bda4d905c (from https://pypi.org/simple/cidc-ngs-pipeline-api/) (requires-python:>=3.6), version: 0.1.5
2021-10-15T14:38:51,025   Skipping link: No binaries permitted for cidc-ngs-pipeline-api: https://files.pythonhosted.org/packages/51/a6/9750032f7be458ef7fe5ce8c961ef0d6d6dd776383c288db4c754bf6fc62/cidc_ngs_pipeline_api-0.1.6-py3-none-any.whl#sha256=8ff130bde44078018f1fedf3a4e07c3c9adc0230f2a6dbb44e4266e372a26610 (from https://pypi.org/simple/cidc-ngs-pipeline-api/) (requires-python:>=3.6)
2021-10-15T14:38:51,025   Found link https://files.pythonhosted.org/packages/9b/0e/35c8e8177092fc1576ae22518fdc5d10388800441a58c277fe9c9b132bbc/cidc_ngs_pipeline_api-0.1.6.tar.gz#sha256=486eee7c3b727941787aeffaeed36c28cdde5c0eec271834b822e322a59498e8 (from https://pypi.org/simple/cidc-ngs-pipeline-api/) (requires-python:>=3.6), version: 0.1.6
2021-10-15T14:38:51,026   Skipping link: No binaries permitted for cidc-ngs-pipeline-api: https://files.pythonhosted.org/packages/d1/05/c0f38ac0085f3436b057103081084e30dc37ded05668d1cde90a263495a5/cidc_ngs_pipeline_api-0.1.7-py3-none-any.whl#sha256=9673d25a94b558c2d047aee9ed8f6ad333d14bbf52bc00fc17000fe2ba928c5b (from https://pypi.org/simple/cidc-ngs-pipeline-api/) (requires-python:>=3.6)
2021-10-15T14:38:51,026   Found link https://files.pythonhosted.org/packages/8a/c0/32dc21dd954e2612258def8fdf7fda279d6794fd7f7d169bce2f5a031891/cidc_ngs_pipeline_api-0.1.7.tar.gz#sha256=f1e6e93f9cb604b3da31cf676e708dd5b29f085af51276f63dc93ad723eb6de3 (from https://pypi.org/simple/cidc-ngs-pipeline-api/) (requires-python:>=3.6), version: 0.1.7
2021-10-15T14:38:51,026   Skipping link: No binaries permitted for cidc-ngs-pipeline-api: https://files.pythonhosted.org/packages/fe/6f/4d15d1f2f8457ccbbdefdf1f979a2a88d41ff8a3f71f17f47dddf462f53e/cidc_ngs_pipeline_api-0.1.8-py3-none-any.whl#sha256=f1a1b7a30efd367913cf51384b977187657b938c421bf6f9051902ec2e61a02e (from https://pypi.org/simple/cidc-ngs-pipeline-api/) (requires-python:>=3.6)
2021-10-15T14:38:51,027   Found link https://files.pythonhosted.org/packages/67/cd/f4c3ebdf6dfaae590239ef3b943ffe08d7e101bb7934a484fdd39cc96f01/cidc_ngs_pipeline_api-0.1.8.tar.gz#sha256=dc43f767dd0b8a1ca3767089b11970ac10bb8eae2beda1173147abc32d85ba29 (from https://pypi.org/simple/cidc-ngs-pipeline-api/) (requires-python:>=3.6), version: 0.1.8
2021-10-15T14:38:51,027   Skipping link: No binaries permitted for cidc-ngs-pipeline-api: https://files.pythonhosted.org/packages/74/59/619c739c427a54e86e396e0de9947a2aeef18505641afc8b53ff262a985b/cidc_ngs_pipeline_api-0.1.9-py3-none-any.whl#sha256=1fcbbfe91fe74032d09b845f152724b123a1eb21b16c477162f09888de350f2a (from https://pypi.org/simple/cidc-ngs-pipeline-api/) (requires-python:>=3.6)
2021-10-15T14:38:51,028   Found link https://files.pythonhosted.org/packages/53/54/b2534798bf41979d520d9660ea543402d42eb39fc73cb4db89195d10c390/cidc_ngs_pipeline_api-0.1.9.tar.gz#sha256=d3a03b24304dd4582a7227ab472d27085be9d9c06a0c031c83cfa9ece772d87d (from https://pypi.org/simple/cidc-ngs-pipeline-api/) (requires-python:>=3.6), version: 0.1.9
2021-10-15T14:38:51,028   Skipping link: No binaries permitted for cidc-ngs-pipeline-api: https://files.pythonhosted.org/packages/11/6d/75012ca8ef0a076f50b7d69e71a1994751c16d21263a05a380f0af9a7249/cidc_ngs_pipeline_api-0.1.10-py3-none-any.whl#sha256=5a97e70b5a97be756021c15a0cd5f4e4bd2334415e0e4765fcf2086d45dc1ddb (from https://pypi.org/simple/cidc-ngs-pipeline-api/) (requires-python:>=3.6)
2021-10-15T14:38:51,029   Found link https://files.pythonhosted.org/packages/00/45/46ec726ac7ba1f6dc18f99b99d0435da762c9ed42d149c367733482590a9/cidc_ngs_pipeline_api-0.1.10.tar.gz#sha256=278e76f6fbb384d34a1fc7b8bfd3249563b90e35eca2d23947e6d99e13441aa3 (from https://pypi.org/simple/cidc-ngs-pipeline-api/) (requires-python:>=3.6), version: 0.1.10
2021-10-15T14:38:51,029   Skipping link: No binaries permitted for cidc-ngs-pipeline-api: https://files.pythonhosted.org/packages/34/0c/c0f2947e59ead96372bf41722e917f2e6ceff981a26200e0a1535aeb5ed6/cidc_ngs_pipeline_api-0.1.11-py3-none-any.whl#sha256=b78c3c31fdeadfd8dde14cc0c0818801c92560efd4422676c09a7cba564bcbfa (from https://pypi.org/simple/cidc-ngs-pipeline-api/) (requires-python:>=3.6)
2021-10-15T14:38:51,030   Found link https://files.pythonhosted.org/packages/73/64/96e700b31b4cce120604df67c0758aab90e3b4e77f3289605d930b92da18/cidc_ngs_pipeline_api-0.1.11.tar.gz#sha256=e3772e42435bd8ef0b2ad892a0fca3fc4e95d018d78bb7dd7778d1dc03301518 (from https://pypi.org/simple/cidc-ngs-pipeline-api/) (requires-python:>=3.6), version: 0.1.11
2021-10-15T14:38:51,030   Skipping link: No binaries permitted for cidc-ngs-pipeline-api: https://files.pythonhosted.org/packages/2c/1a/cb0a78341cecbce21dbd16f5f0ce6c37be2b64232055e45dbd3b7a0c8b9a/cidc_ngs_pipeline_api-0.1.12-py3-none-any.whl#sha256=f041d309a7ee3511fb822d5a95f87ee0eafb2ad4bc52077e900ac8a75dda920d (from https://pypi.org/simple/cidc-ngs-pipeline-api/) (requires-python:>=3.6)
2021-10-15T14:38:51,030   Found link https://files.pythonhosted.org/packages/06/18/23c4cc4aac0e61503c80ab34a6d2b5378e3c27a1798fd11ef2562654697b/cidc_ngs_pipeline_api-0.1.12.tar.gz#sha256=f8f8f1766724421992a621e2441f8c587565f9235359074477750850b05c089f (from https://pypi.org/simple/cidc-ngs-pipeline-api/) (requires-python:>=3.6), version: 0.1.12
2021-10-15T14:38:51,031   Skipping link: No binaries permitted for cidc-ngs-pipeline-api: https://files.pythonhosted.org/packages/d8/c8/fd048b2089c88eedd48031d44b8b83e47d07de3a1c4fb5b5ed3f3a206968/cidc_ngs_pipeline_api-0.1.13-py3-none-any.whl#sha256=703ae09096ab89266eb8750607703c15922feb2888cca44e5ebee3c4ff6d1015 (from https://pypi.org/simple/cidc-ngs-pipeline-api/) (requires-python:>=3.6)
2021-10-15T14:38:51,031   Found link https://files.pythonhosted.org/packages/cb/4c/2533adac10d2414ab42c550dae76f8367333cb7573237be1106900ec06c1/cidc_ngs_pipeline_api-0.1.13.tar.gz#sha256=09606df93b7568539da65a6c99914392d356a991ab77063b1dc28f30a944e7c9 (from https://pypi.org/simple/cidc-ngs-pipeline-api/) (requires-python:>=3.6), version: 0.1.13
2021-10-15T14:38:51,032   Skipping link: No binaries permitted for cidc-ngs-pipeline-api: https://files.pythonhosted.org/packages/9d/01/c269abfe16aadfb81ea8d738b6c92568ac87599ad76e597da97fdc5af71e/cidc_ngs_pipeline_api-0.1.14-py3-none-any.whl#sha256=46ff3f3504c438048a63e3a411b2d7b23a04c18e7a6ca2f1ddfa861c04401f1e (from https://pypi.org/simple/cidc-ngs-pipeline-api/) (requires-python:>=3.6)
2021-10-15T14:38:51,032   Found link https://files.pythonhosted.org/packages/e3/51/f3313023607a56ae7c977d33bfb4d43d7d3719277908d42e1e4d15c192f7/cidc_ngs_pipeline_api-0.1.14.tar.gz#sha256=0fc07115fad5051b8904977aa3850e456aa513d29da04dac697406df293161a8 (from https://pypi.org/simple/cidc-ngs-pipeline-api/) (requires-python:>=3.6), version: 0.1.14
2021-10-15T14:38:51,032   Skipping link: No binaries permitted for cidc-ngs-pipeline-api: https://files.pythonhosted.org/packages/c9/c7/bde8fb3f6207adeda0e3562b57de2d132906dc09e64c6c8318b7fbb5bb2e/cidc_ngs_pipeline_api-0.1.15-py3-none-any.whl#sha256=5b66ea1ae5942c8310f3e550c580781383cd4435f851090a92c222c8f8618f69 (from https://pypi.org/simple/cidc-ngs-pipeline-api/) (requires-python:>=3.6)
2021-10-15T14:38:51,033   Found link https://files.pythonhosted.org/packages/04/b3/e3ac098be56ebbacf6957d5ae70d391536c5e611e720203a7f4eb7e2c333/cidc_ngs_pipeline_api-0.1.15.tar.gz#sha256=06f5d6255f3417abbbc0df9942b3f78649fb8b8b4a56de1947b77b246d87a054 (from https://pypi.org/simple/cidc-ngs-pipeline-api/) (requires-python:>=3.6), version: 0.1.15
2021-10-15T14:38:51,033 Fetching project page and analyzing links: https://www.piwheels.org/simple/cidc-ngs-pipeline-api/
2021-10-15T14:38:51,034 Getting page https://www.piwheels.org/simple/cidc-ngs-pipeline-api/
2021-10-15T14:38:51,035 Found index url https://www.piwheels.org/simple
2021-10-15T14:39:06,069 WARNING: Retrying (Retry(total=4, connect=None, read=None, redirect=None, status=None)) after connection broken by 'ReadTimeoutError("HTTPSConnectionPool(host='www.piwheels.org', port=443): Read timed out. (read timeout=15)")': /simple/cidc-ngs-pipeline-api/
2021-10-15T14:39:19,914   Skipping link: No binaries permitted for cidc-ngs-pipeline-api: https://www.piwheels.org/simple/cidc-ngs-pipeline-api/cidc_ngs_pipeline_api-0.1.10-py3-none-any.whl#sha256=5a97e70b5a97be756021c15a0cd5f4e4bd2334415e0e4765fcf2086d45dc1ddb (from https://www.piwheels.org/simple/cidc-ngs-pipeline-api/) (requires-python:>=3.6)
2021-10-15T14:39:19,915   Skipping link: No binaries permitted for cidc-ngs-pipeline-api: https://www.piwheels.org/simple/cidc-ngs-pipeline-api/cidc_ngs_pipeline_api-0.1.11-py3-none-any.whl#sha256=b78c3c31fdeadfd8dde14cc0c0818801c92560efd4422676c09a7cba564bcbfa (from https://www.piwheels.org/simple/cidc-ngs-pipeline-api/) (requires-python:>=3.6)
2021-10-15T14:39:19,915   Skipping link: No binaries permitted for cidc-ngs-pipeline-api: https://www.piwheels.org/simple/cidc-ngs-pipeline-api/cidc_ngs_pipeline_api-0.1.12-py3-none-any.whl#sha256=f041d309a7ee3511fb822d5a95f87ee0eafb2ad4bc52077e900ac8a75dda920d (from https://www.piwheels.org/simple/cidc-ngs-pipeline-api/) (requires-python:>=3.6)
2021-10-15T14:39:19,915   Skipping link: No binaries permitted for cidc-ngs-pipeline-api: https://www.piwheels.org/simple/cidc-ngs-pipeline-api/cidc_ngs_pipeline_api-0.1.13-py3-none-any.whl#sha256=703ae09096ab89266eb8750607703c15922feb2888cca44e5ebee3c4ff6d1015 (from https://www.piwheels.org/simple/cidc-ngs-pipeline-api/) (requires-python:>=3.6)
2021-10-15T14:39:19,915   Skipping link: No binaries permitted for cidc-ngs-pipeline-api: https://www.piwheels.org/simple/cidc-ngs-pipeline-api/cidc_ngs_pipeline_api-0.1.14-py3-none-any.whl#sha256=0fd6f2323195056245234a26945b3b3585304c5f3b17e586ee93cf1b648767e4 (from https://www.piwheels.org/simple/cidc-ngs-pipeline-api/) (requires-python:>=3.6)
2021-10-15T14:39:19,916   Skipping link: No binaries permitted for cidc-ngs-pipeline-api: https://www.piwheels.org/simple/cidc-ngs-pipeline-api/cidc_ngs_pipeline_api-0.1.3-py3-none-any.whl#sha256=84f6e63c8d0e4b5d15de07393cdc599b8e92bcd963f489f77e3672fad846d7ee (from https://www.piwheels.org/simple/cidc-ngs-pipeline-api/) (requires-python:>=3.6)
2021-10-15T14:39:19,916   Skipping link: No binaries permitted for cidc-ngs-pipeline-api: https://www.piwheels.org/simple/cidc-ngs-pipeline-api/cidc_ngs_pipeline_api-0.1.4-py3-none-any.whl#sha256=3f18759c19e177d09ebbda9719d349cd47d03e0fdaded7cbc3d5b23ae4abee22 (from https://www.piwheels.org/simple/cidc-ngs-pipeline-api/) (requires-python:>=3.6)
2021-10-15T14:39:19,916   Skipping link: No binaries permitted for cidc-ngs-pipeline-api: https://www.piwheels.org/simple/cidc-ngs-pipeline-api/cidc_ngs_pipeline_api-0.1.5-py3-none-any.whl#sha256=632f717b48179ca9ae33e1f121af699db3ee3ef1668e5223db1bb19c2201b53b (from https://www.piwheels.org/simple/cidc-ngs-pipeline-api/) (requires-python:>=3.6)
2021-10-15T14:39:19,916   Skipping link: No binaries permitted for cidc-ngs-pipeline-api: https://www.piwheels.org/simple/cidc-ngs-pipeline-api/cidc_ngs_pipeline_api-0.1.6-py3-none-any.whl#sha256=ffa8560a756d968034cd35ae15299e3ac31bc0b3f0179dc50f23e7fd7d963a4f (from https://www.piwheels.org/simple/cidc-ngs-pipeline-api/) (requires-python:>=3.6)
2021-10-15T14:39:19,916   Skipping link: No binaries permitted for cidc-ngs-pipeline-api: https://www.piwheels.org/simple/cidc-ngs-pipeline-api/cidc_ngs_pipeline_api-0.1.7-py3-none-any.whl#sha256=9673d25a94b558c2d047aee9ed8f6ad333d14bbf52bc00fc17000fe2ba928c5b (from https://www.piwheels.org/simple/cidc-ngs-pipeline-api/) (requires-python:>=3.6)
2021-10-15T14:39:19,917   Skipping link: No binaries permitted for cidc-ngs-pipeline-api: https://www.piwheels.org/simple/cidc-ngs-pipeline-api/cidc_ngs_pipeline_api-0.1.8-py3-none-any.whl#sha256=f1a1b7a30efd367913cf51384b977187657b938c421bf6f9051902ec2e61a02e (from https://www.piwheels.org/simple/cidc-ngs-pipeline-api/) (requires-python:>=3.6)
2021-10-15T14:39:19,917   Skipping link: No binaries permitted for cidc-ngs-pipeline-api: https://www.piwheels.org/simple/cidc-ngs-pipeline-api/cidc_ngs_pipeline_api-0.1.9-py3-none-any.whl#sha256=1fcbbfe91fe74032d09b845f152724b123a1eb21b16c477162f09888de350f2a (from https://www.piwheels.org/simple/cidc-ngs-pipeline-api/) (requires-python:>=3.6)
2021-10-15T14:39:19,917 Skipping link: not a file: https://www.piwheels.org/simple/cidc-ngs-pipeline-api/
2021-10-15T14:39:19,917 Skipping link: not a file: https://pypi.org/simple/cidc-ngs-pipeline-api/
2021-10-15T14:39:19,933 Given no hashes to check 1 links for project 'cidc-ngs-pipeline-api': discarding no candidates
2021-10-15T14:39:19,948 Collecting cidc-ngs-pipeline-api==0.1.15
2021-10-15T14:39:19,950   Created temporary directory: /tmp/pip-unpack-_y1jkro2
2021-10-15T14:39:20,336   Downloading cidc_ngs_pipeline_api-0.1.15.tar.gz (2.3 MB)
2021-10-15T14:39:20,747   Added cidc-ngs-pipeline-api==0.1.15 from https://files.pythonhosted.org/packages/04/b3/e3ac098be56ebbacf6957d5ae70d391536c5e611e720203a7f4eb7e2c333/cidc_ngs_pipeline_api-0.1.15.tar.gz#sha256=06f5d6255f3417abbbc0df9942b3f78649fb8b8b4a56de1947b77b246d87a054 to build tracker '/tmp/pip-req-tracker-8n44hbdw'
2021-10-15T14:39:20,748     Running setup.py (path:/tmp/pip-wheel-qgaqz0lr/cidc-ngs-pipeline-api_7231d9bf378d47168eb0f8df14325614/setup.py) egg_info for package cidc-ngs-pipeline-api
2021-10-15T14:39:20,749     Created temporary directory: /tmp/pip-pip-egg-info-9kxqgzfx
2021-10-15T14:39:20,749     Running command python setup.py egg_info
2021-10-15T14:39:21,645     rna
2021-10-15T14:39:21,645     atacseq
2021-10-15T14:39:21,645     wes_tumor_only
2021-10-15T14:39:21,645     wes
2021-10-15T14:39:21,646     running egg_info
2021-10-15T14:39:21,647     creating /tmp/pip-pip-egg-info-9kxqgzfx/cidc_ngs_pipeline_api.egg-info
2021-10-15T14:39:21,648     writing /tmp/pip-pip-egg-info-9kxqgzfx/cidc_ngs_pipeline_api.egg-info/PKG-INFO
2021-10-15T14:39:21,651     writing dependency_links to /tmp/pip-pip-egg-info-9kxqgzfx/cidc_ngs_pipeline_api.egg-info/dependency_links.txt
2021-10-15T14:39:21,653     writing requirements to /tmp/pip-pip-egg-info-9kxqgzfx/cidc_ngs_pipeline_api.egg-info/requires.txt
2021-10-15T14:39:21,654     writing top-level names to /tmp/pip-pip-egg-info-9kxqgzfx/cidc_ngs_pipeline_api.egg-info/top_level.txt
2021-10-15T14:39:21,655     writing manifest file '/tmp/pip-pip-egg-info-9kxqgzfx/cidc_ngs_pipeline_api.egg-info/SOURCES.txt'
2021-10-15T14:39:21,792     reading manifest file '/tmp/pip-pip-egg-info-9kxqgzfx/cidc_ngs_pipeline_api.egg-info/SOURCES.txt'
2021-10-15T14:39:21,793     reading manifest template 'MANIFEST.in'
2021-10-15T14:39:21,800     writing manifest file '/tmp/pip-pip-egg-info-9kxqgzfx/cidc_ngs_pipeline_api.egg-info/SOURCES.txt'
2021-10-15T14:39:21,864   Source in /tmp/pip-wheel-qgaqz0lr/cidc-ngs-pipeline-api_7231d9bf378d47168eb0f8df14325614 has version 0.1.15, which satisfies requirement cidc-ngs-pipeline-api==0.1.15 from https://files.pythonhosted.org/packages/04/b3/e3ac098be56ebbacf6957d5ae70d391536c5e611e720203a7f4eb7e2c333/cidc_ngs_pipeline_api-0.1.15.tar.gz#sha256=06f5d6255f3417abbbc0df9942b3f78649fb8b8b4a56de1947b77b246d87a054
2021-10-15T14:39:21,865   Removed cidc-ngs-pipeline-api==0.1.15 from https://files.pythonhosted.org/packages/04/b3/e3ac098be56ebbacf6957d5ae70d391536c5e611e720203a7f4eb7e2c333/cidc_ngs_pipeline_api-0.1.15.tar.gz#sha256=06f5d6255f3417abbbc0df9942b3f78649fb8b8b4a56de1947b77b246d87a054 from build tracker '/tmp/pip-req-tracker-8n44hbdw'
2021-10-15T14:39:21,871 Created temporary directory: /tmp/pip-unpack-r5au6oda
2021-10-15T14:39:21,871 Building wheels for collected packages: cidc-ngs-pipeline-api
2021-10-15T14:39:21,875   Created temporary directory: /tmp/pip-wheel-tie4zuth
2021-10-15T14:39:21,876   Building wheel for cidc-ngs-pipeline-api (setup.py): started
2021-10-15T14:39:21,876   Destination directory: /tmp/pip-wheel-tie4zuth
2021-10-15T14:39:21,876   Running command /usr/bin/python3 -u -c 'import io, os, sys, setuptools, tokenize; sys.argv[0] = '"'"'/tmp/pip-wheel-qgaqz0lr/cidc-ngs-pipeline-api_7231d9bf378d47168eb0f8df14325614/setup.py'"'"'; __file__='"'"'/tmp/pip-wheel-qgaqz0lr/cidc-ngs-pipeline-api_7231d9bf378d47168eb0f8df14325614/setup.py'"'"';f = getattr(tokenize, '"'"'open'"'"', open)(__file__) if os.path.exists(__file__) else io.StringIO('"'"'from setuptools import setup; setup()'"'"');code = f.read().replace('"'"'\r\n'"'"', '"'"'\n'"'"');f.close();exec(compile(code, __file__, '"'"'exec'"'"'))' bdist_wheel -d /tmp/pip-wheel-tie4zuth
2021-10-15T14:39:22,566   rna
2021-10-15T14:39:22,567   atacseq
2021-10-15T14:39:22,568   wes_tumor_only
2021-10-15T14:39:22,569   wes
2021-10-15T14:39:22,740   running bdist_wheel
2021-10-15T14:39:22,744   running build
2021-10-15T14:39:22,745   running build_py
2021-10-15T14:39:22,871   creating build
2021-10-15T14:39:22,872   creating build/lib
2021-10-15T14:39:22,872   creating build/lib/cidc_ngs_pipeline_api
2021-10-15T14:39:22,873   copying cidc_ngs_pipeline_api/__init__.py -> build/lib/cidc_ngs_pipeline_api
2021-10-15T14:39:22,875   running egg_info
2021-10-15T14:39:22,889   writing cidc_ngs_pipeline_api.egg-info/PKG-INFO
2021-10-15T14:39:22,891   writing dependency_links to cidc_ngs_pipeline_api.egg-info/dependency_links.txt
2021-10-15T14:39:22,893   writing requirements to cidc_ngs_pipeline_api.egg-info/requires.txt
2021-10-15T14:39:22,894   writing top-level names to cidc_ngs_pipeline_api.egg-info/top_level.txt
2021-10-15T14:39:22,898   reading manifest file 'cidc_ngs_pipeline_api.egg-info/SOURCES.txt'
2021-10-15T14:39:22,901   reading manifest template 'MANIFEST.in'
2021-10-15T14:39:22,909   writing manifest file 'cidc_ngs_pipeline_api.egg-info/SOURCES.txt'
2021-10-15T14:39:22,912   copying cidc_ngs_pipeline_api/output_API.schema.json -> build/lib/cidc_ngs_pipeline_api
2021-10-15T14:39:22,915   creating build/lib/cidc_ngs_pipeline_api/__pycache__
2021-10-15T14:39:22,916   copying cidc_ngs_pipeline_api/__pycache__/__init__.cpython-37.pyc -> build/lib/cidc_ngs_pipeline_api/__pycache__
2021-10-15T14:39:22,918   creating build/lib/cidc_ngs_pipeline_api/atacseq
2021-10-15T14:39:22,919   copying cidc_ngs_pipeline_api/atacseq/atacseq.md -> build/lib/cidc_ngs_pipeline_api/atacseq
2021-10-15T14:39:22,922   copying cidc_ngs_pipeline_api/atacseq/atacseq_output_API.json -> build/lib/cidc_ngs_pipeline_api/atacseq
2021-10-15T14:39:22,924   creating build/lib/cidc_ngs_pipeline_api/atacseq/imgs
2021-10-15T14:39:22,925   copying cidc_ngs_pipeline_api/atacseq/imgs/atacseq.png -> build/lib/cidc_ngs_pipeline_api/atacseq/imgs
2021-10-15T14:39:22,943   creating build/lib/cidc_ngs_pipeline_api/rna
2021-10-15T14:39:22,944   copying cidc_ngs_pipeline_api/rna/rna.md -> build/lib/cidc_ngs_pipeline_api/rna
2021-10-15T14:39:22,946   copying cidc_ngs_pipeline_api/rna/rna_config.schema.json -> build/lib/cidc_ngs_pipeline_api/rna
2021-10-15T14:39:22,949   copying cidc_ngs_pipeline_api/rna/rna_output_API.json -> build/lib/cidc_ngs_pipeline_api/rna
2021-10-15T14:39:22,952   creating build/lib/cidc_ngs_pipeline_api/rna/imgs
2021-10-15T14:39:22,953   copying cidc_ngs_pipeline_api/rna/imgs/RIMA.png -> build/lib/cidc_ngs_pipeline_api/rna/imgs
2021-10-15T14:39:22,983   creating build/lib/cidc_ngs_pipeline_api/tcr
2021-10-15T14:39:22,984   copying cidc_ngs_pipeline_api/tcr/tcr.md -> build/lib/cidc_ngs_pipeline_api/tcr
2021-10-15T14:39:22,986   creating build/lib/cidc_ngs_pipeline_api/tcr/imgs
2021-10-15T14:39:22,987   copying cidc_ngs_pipeline_api/tcr/imgs/TCRseq.png -> build/lib/cidc_ngs_pipeline_api/tcr/imgs
2021-10-15T14:39:22,994   creating build/lib/cidc_ngs_pipeline_api/wes
2021-10-15T14:39:22,995   copying cidc_ngs_pipeline_api/wes/wes.md -> build/lib/cidc_ngs_pipeline_api/wes
2021-10-15T14:39:22,997   copying cidc_ngs_pipeline_api/wes/wes_config.schema.json -> build/lib/cidc_ngs_pipeline_api/wes
2021-10-15T14:39:22,999   copying cidc_ngs_pipeline_api/wes/wes_output_API.json -> build/lib/cidc_ngs_pipeline_api/wes
2021-10-15T14:39:23,003   copying cidc_ngs_pipeline_api/wes/wes_output_API.py -> build/lib/cidc_ngs_pipeline_api/wes
2021-10-15T14:39:23,006   copying cidc_ngs_pipeline_api/wes/wes_tumor_only_output_API.json -> build/lib/cidc_ngs_pipeline_api/wes
2021-10-15T14:39:23,010   creating build/lib/cidc_ngs_pipeline_api/wes/imgs
2021-10-15T14:39:23,011   copying cidc_ngs_pipeline_api/wes/imgs/wes.png -> build/lib/cidc_ngs_pipeline_api/wes/imgs
2021-10-15T14:39:23,034   installing to build/bdist.linux-armv7l/wheel
2021-10-15T14:39:23,034   running install
2021-10-15T14:39:23,035   running install_lib
2021-10-15T14:39:23,040   creating build/bdist.linux-armv7l
2021-10-15T14:39:23,040   creating build/bdist.linux-armv7l/wheel
2021-10-15T14:39:23,042   creating build/bdist.linux-armv7l/wheel/cidc_ngs_pipeline_api
2021-10-15T14:39:23,044   creating build/bdist.linux-armv7l/wheel/cidc_ngs_pipeline_api/tcr
2021-10-15T14:39:23,045   copying build/lib/cidc_ngs_pipeline_api/tcr/tcr.md -> build/bdist.linux-armv7l/wheel/cidc_ngs_pipeline_api/tcr
2021-10-15T14:39:23,048   creating build/bdist.linux-armv7l/wheel/cidc_ngs_pipeline_api/tcr/imgs
2021-10-15T14:39:23,049   copying build/lib/cidc_ngs_pipeline_api/tcr/imgs/TCRseq.png -> build/bdist.linux-armv7l/wheel/cidc_ngs_pipeline_api/tcr/imgs
2021-10-15T14:39:23,056   creating build/bdist.linux-armv7l/wheel/cidc_ngs_pipeline_api/rna
2021-10-15T14:39:23,057   copying build/lib/cidc_ngs_pipeline_api/rna/rna_config.schema.json -> build/bdist.linux-armv7l/wheel/cidc_ngs_pipeline_api/rna
2021-10-15T14:39:23,060   copying build/lib/cidc_ngs_pipeline_api/rna/rna_output_API.json -> build/bdist.linux-armv7l/wheel/cidc_ngs_pipeline_api/rna
2021-10-15T14:39:23,062   copying build/lib/cidc_ngs_pipeline_api/rna/rna.md -> build/bdist.linux-armv7l/wheel/cidc_ngs_pipeline_api/rna
2021-10-15T14:39:23,065   creating build/bdist.linux-armv7l/wheel/cidc_ngs_pipeline_api/rna/imgs
2021-10-15T14:39:23,065   copying build/lib/cidc_ngs_pipeline_api/rna/imgs/RIMA.png -> build/bdist.linux-armv7l/wheel/cidc_ngs_pipeline_api/rna/imgs
2021-10-15T14:39:23,097   copying build/lib/cidc_ngs_pipeline_api/output_API.schema.json -> build/bdist.linux-armv7l/wheel/cidc_ngs_pipeline_api
2021-10-15T14:39:23,099   creating build/bdist.linux-armv7l/wheel/cidc_ngs_pipeline_api/atacseq
2021-10-15T14:39:23,100   copying build/lib/cidc_ngs_pipeline_api/atacseq/atacseq.md -> build/bdist.linux-armv7l/wheel/cidc_ngs_pipeline_api/atacseq
2021-10-15T14:39:23,102   creating build/bdist.linux-armv7l/wheel/cidc_ngs_pipeline_api/atacseq/imgs
2021-10-15T14:39:23,103   copying build/lib/cidc_ngs_pipeline_api/atacseq/imgs/atacseq.png -> build/bdist.linux-armv7l/wheel/cidc_ngs_pipeline_api/atacseq/imgs
2021-10-15T14:39:23,122   copying build/lib/cidc_ngs_pipeline_api/atacseq/atacseq_output_API.json -> build/bdist.linux-armv7l/wheel/cidc_ngs_pipeline_api/atacseq
2021-10-15T14:39:23,124   creating build/bdist.linux-armv7l/wheel/cidc_ngs_pipeline_api/__pycache__
2021-10-15T14:39:23,125   copying build/lib/cidc_ngs_pipeline_api/__pycache__/__init__.cpython-37.pyc -> build/bdist.linux-armv7l/wheel/cidc_ngs_pipeline_api/__pycache__
2021-10-15T14:39:23,127   copying build/lib/cidc_ngs_pipeline_api/__init__.py -> build/bdist.linux-armv7l/wheel/cidc_ngs_pipeline_api
2021-10-15T14:39:23,129   creating build/bdist.linux-armv7l/wheel/cidc_ngs_pipeline_api/wes
2021-10-15T14:39:23,130   copying build/lib/cidc_ngs_pipeline_api/wes/wes_config.schema.json -> build/bdist.linux-armv7l/wheel/cidc_ngs_pipeline_api/wes
2021-10-15T14:39:23,132   copying build/lib/cidc_ngs_pipeline_api/wes/wes.md -> build/bdist.linux-armv7l/wheel/cidc_ngs_pipeline_api/wes
2021-10-15T14:39:23,134   creating build/bdist.linux-armv7l/wheel/cidc_ngs_pipeline_api/wes/imgs
2021-10-15T14:39:23,135   copying build/lib/cidc_ngs_pipeline_api/wes/imgs/wes.png -> build/bdist.linux-armv7l/wheel/cidc_ngs_pipeline_api/wes/imgs
2021-10-15T14:39:23,146   copying build/lib/cidc_ngs_pipeline_api/wes/wes_tumor_only_output_API.json -> build/bdist.linux-armv7l/wheel/cidc_ngs_pipeline_api/wes
2021-10-15T14:39:23,149   copying build/lib/cidc_ngs_pipeline_api/wes/wes_output_API.py -> build/bdist.linux-armv7l/wheel/cidc_ngs_pipeline_api/wes
2021-10-15T14:39:23,152   copying build/lib/cidc_ngs_pipeline_api/wes/wes_output_API.json -> build/bdist.linux-armv7l/wheel/cidc_ngs_pipeline_api/wes
2021-10-15T14:39:23,154   running install_egg_info
2021-10-15T14:39:23,163   Copying cidc_ngs_pipeline_api.egg-info to build/bdist.linux-armv7l/wheel/cidc_ngs_pipeline_api-0.1.15-py3.7.egg-info
2021-10-15T14:39:23,175   running install_scripts
2021-10-15T14:39:23,248   creating build/bdist.linux-armv7l/wheel/cidc_ngs_pipeline_api-0.1.15.dist-info/WHEEL
2021-10-15T14:39:23,251   creating '/tmp/pip-wheel-tie4zuth/cidc_ngs_pipeline_api-0.1.15-py3-none-any.whl' and adding 'build/bdist.linux-armv7l/wheel' to it
2021-10-15T14:39:23,253   adding 'cidc_ngs_pipeline_api/__init__.py'
2021-10-15T14:39:23,255   adding 'cidc_ngs_pipeline_api/output_API.schema.json'
2021-10-15T14:39:23,256   adding 'cidc_ngs_pipeline_api/__pycache__/__init__.cpython-37.pyc'
2021-10-15T14:39:23,259   adding 'cidc_ngs_pipeline_api/atacseq/atacseq.md'
2021-10-15T14:39:23,260   adding 'cidc_ngs_pipeline_api/atacseq/atacseq_output_API.json'
2021-10-15T14:39:23,349   adding 'cidc_ngs_pipeline_api/atacseq/imgs/atacseq.png'
2021-10-15T14:39:23,357   adding 'cidc_ngs_pipeline_api/rna/rna.md'
2021-10-15T14:39:23,359   adding 'cidc_ngs_pipeline_api/rna/rna_config.schema.json'
2021-10-15T14:39:23,361   adding 'cidc_ngs_pipeline_api/rna/rna_output_API.json'
2021-10-15T14:39:23,494   adding 'cidc_ngs_pipeline_api/rna/imgs/RIMA.png'
2021-10-15T14:39:23,505   adding 'cidc_ngs_pipeline_api/tcr/tcr.md'
2021-10-15T14:39:23,525   adding 'cidc_ngs_pipeline_api/tcr/imgs/TCRseq.png'
2021-10-15T14:39:23,529   adding 'cidc_ngs_pipeline_api/wes/wes.md'
2021-10-15T14:39:23,530   adding 'cidc_ngs_pipeline_api/wes/wes_config.schema.json'
2021-10-15T14:39:23,532   adding 'cidc_ngs_pipeline_api/wes/wes_output_API.json'
2021-10-15T14:39:23,534   adding 'cidc_ngs_pipeline_api/wes/wes_output_API.py'
2021-10-15T14:39:23,536   adding 'cidc_ngs_pipeline_api/wes/wes_tumor_only_output_API.json'
2021-10-15T14:39:23,587   adding 'cidc_ngs_pipeline_api/wes/imgs/wes.png'
2021-10-15T14:39:23,592   adding 'cidc_ngs_pipeline_api-0.1.15.dist-info/METADATA'
2021-10-15T14:39:23,593   adding 'cidc_ngs_pipeline_api-0.1.15.dist-info/WHEEL'
2021-10-15T14:39:23,594   adding 'cidc_ngs_pipeline_api-0.1.15.dist-info/top_level.txt'
2021-10-15T14:39:23,595   adding 'cidc_ngs_pipeline_api-0.1.15.dist-info/RECORD'
2021-10-15T14:39:23,627   removing build/bdist.linux-armv7l/wheel
2021-10-15T14:39:23,708   Building wheel for cidc-ngs-pipeline-api (setup.py): finished with status 'done'
2021-10-15T14:39:23,741   Created wheel for cidc-ngs-pipeline-api: filename=cidc_ngs_pipeline_api-0.1.15-py3-none-any.whl size=2339478 sha256=690df872380f5f0872c5e389cf1756618910c2a95656552927f1d0e7c555e31d
2021-10-15T14:39:23,741   Stored in directory: /tmp/pip-ephem-wheel-cache-2z_r_59a/wheels/18/70/59/0390cf3383f9d77ec980f8b33440eed9b8bb50a7b089f619ce
2021-10-15T14:39:23,752 Successfully built cidc-ngs-pipeline-api
2021-10-15T14:39:23,832 Removed build tracker: '/tmp/pip-req-tracker-8n44hbdw'