2021-10-17T13:45:19,348 Created temporary directory: /tmp/pip-ephem-wheel-cache-slpwzbcq 2021-10-17T13:45:19,351 Created temporary directory: /tmp/pip-req-tracker-y51e92aa 2021-10-17T13:45:19,351 Initialized build tracking at /tmp/pip-req-tracker-y51e92aa 2021-10-17T13:45:19,351 Created build tracker: /tmp/pip-req-tracker-y51e92aa 2021-10-17T13:45:19,352 Entered build tracker: /tmp/pip-req-tracker-y51e92aa 2021-10-17T13:45:19,352 Created temporary directory: /tmp/pip-wheel-nqxpv97u 2021-10-17T13:45:19,388 Looking in indexes: https://pypi.org/simple, https://www.piwheels.org/simple 2021-10-17T13:45:19,391 2 location(s) to search for versions of rdkit-to-params: 2021-10-17T13:45:19,391 * https://pypi.org/simple/rdkit-to-params/ 2021-10-17T13:45:19,391 * https://www.piwheels.org/simple/rdkit-to-params/ 2021-10-17T13:45:19,391 Fetching project page and analyzing links: https://pypi.org/simple/rdkit-to-params/ 2021-10-17T13:45:19,392 Getting page https://pypi.org/simple/rdkit-to-params/ 2021-10-17T13:45:19,394 Found index url https://pypi.org/simple 2021-10-17T13:45:19,503 Found link https://files.pythonhosted.org/packages/ef/e8/7a8a812f8d2954b8acdb661bcc9ee5a9d67dae96f96a66d75de2e90282d3/rdkit_to_params-1.tar.gz#sha256=56b7e26a5622a7ac90e54b8a3f4fab79cc8bb63b102aafb3f8c17bcf26df2df3 (from https://pypi.org/simple/rdkit-to-params/) (requires-python:>3.6), version: 1 2021-10-17T13:45:19,504 Found link https://files.pythonhosted.org/packages/54/ce/55e4c99a7500a7db8e785ee282208e50ee8dc541089185144622c9cecdcc/rdkit_to_params-1.0.1.tar.gz#sha256=d11f52ee51e9f79cf3befa26a9669fe7c99be41fff8c654293e5a63136b844f0 (from https://pypi.org/simple/rdkit-to-params/) (requires-python:>3.6), version: 1.0.1 2021-10-17T13:45:19,505 Found link https://files.pythonhosted.org/packages/14/06/f2f72e757eb7deea040c09abef0173a5e6f1023de515afee19d060b9a5f1/rdkit_to_params-1.0.2.tar.gz#sha256=5e169dd2a511f6d4a6747b46010b0d1a165d1ee5a34dd16614b87289d0d344e5 (from https://pypi.org/simple/rdkit-to-params/) (requires-python:>3.6), version: 1.0.2 2021-10-17T13:45:19,505 Found link https://files.pythonhosted.org/packages/cd/23/11617c465b9f3dc6ca9f52356ff4ac3e2f80211800b4205b8123a68a7f73/rdkit_to_params-1.0.4.tar.gz#sha256=74031df79149b4069dc924aa73df9e62dba77d7200473ad02c320c2cfd572aa5 (from https://pypi.org/simple/rdkit-to-params/) (requires-python:>3.6), version: 1.0.4 2021-10-17T13:45:19,506 Found link https://files.pythonhosted.org/packages/53/71/fa36800525e407ac79c355f6e97fefdb808964a7df1e43a088d396654c19/rdkit_to_params-1.0.5.tar.gz#sha256=39461952a6c30a27a23b57a99ca389e4b28d02a53e29d60ad3e9a86395965b3a (from https://pypi.org/simple/rdkit-to-params/) (requires-python:>3.6), version: 1.0.5 2021-10-17T13:45:19,506 Found link https://files.pythonhosted.org/packages/45/0b/867d72723c27a00cc7f330417d6f7268c777b8795bd946fc89786a0f39b0/rdkit_to_params-1.1.0.tar.gz#sha256=c182be58feb386ccb242ccfea7910d18ef6efefbf682c3ecc85088b2c053ba91 (from https://pypi.org/simple/rdkit-to-params/) (requires-python:>3.6), version: 1.1.0 2021-10-17T13:45:19,507 Found link https://files.pythonhosted.org/packages/5b/52/a15ce15be2ad2bd3606c4d9cc0055261cd7eafd098cf9a31dee9f931290a/rdkit_to_params-1.1.1.tar.gz#sha256=4b3a7e70b33bdfc7994cfad00199f794e38f6c9cf88d82ceb78eddf1f2dace9d (from https://pypi.org/simple/rdkit-to-params/) (requires-python:>3.6), version: 1.1.1 2021-10-17T13:45:19,507 Found link https://files.pythonhosted.org/packages/1d/2b/97d12fe38813b96f303f04ed4e2e77f5ee540ad683ff79a21c822c047298/rdkit_to_params-1.1.2.tar.gz#sha256=1967c3716553dd6a34ae8805adc65cbd49646ad28b9386dff094b0dd824283ba (from https://pypi.org/simple/rdkit-to-params/) (requires-python:>3.6), version: 1.1.2 2021-10-17T13:45:19,508 Found link https://files.pythonhosted.org/packages/cf/11/4a451d52b8540a19ae08f28cbec4db146f4d11760133163a94808498f433/rdkit_to_params-1.1.3.tar.gz#sha256=5cdd2f3f7f0751bd2065756ac36147254ca6d87b835828a1f7e5bad1500d7450 (from https://pypi.org/simple/rdkit-to-params/) (requires-python:>3.6), version: 1.1.3 2021-10-17T13:45:19,508 Found link https://files.pythonhosted.org/packages/1f/86/5cdd42d226f7f8dafa43fc9f891a39f8a1689648cfdf0b3653f9fea4c9e9/rdkit_to_params-1.1.4b0.tar.gz#sha256=c1b4c083274f84ff5394d17728cd409fa87418618fdf4c146c47e2947f9c7be7 (from https://pypi.org/simple/rdkit-to-params/) (requires-python:>3.6), version: 1.1.4b0 2021-10-17T13:45:19,509 Found link https://files.pythonhosted.org/packages/cd/9d/b405411dd2b049a635c2629fd62cc23a5b881bf85db16557d8bd02a85f8a/rdkit_to_params-1.1.4.tar.gz#sha256=173a7a029628cccba4ccd041b60dd8144dbc884fd9430f7ffb64a5153ad2531d (from https://pypi.org/simple/rdkit-to-params/) (requires-python:>3.6), version: 1.1.4 2021-10-17T13:45:19,510 Found link https://files.pythonhosted.org/packages/5a/ca/cc51bc1b2d9311c11316ee089825a4183e89dcecc489c1a48c19910c4acd/rdkit_to_params-1.1.5b0.tar.gz#sha256=0cf596da6296d15c9fd3725e0d77e4563c4070913c335e58e8bdf13a5857d5e5 (from https://pypi.org/simple/rdkit-to-params/) (requires-python:>3.6), version: 1.1.5b0 2021-10-17T13:45:19,510 Found link https://files.pythonhosted.org/packages/6e/7d/0ad2b20f89b42b7fb4799b474cff2000529df5b64fac11581103b293c899/rdkit_to_params-1.1.5.tar.gz#sha256=1610c7c8f44d6eb028baeebbc028cf96a3262c5f344262713820b1eb1a7d5d43 (from https://pypi.org/simple/rdkit-to-params/) (requires-python:>3.6), version: 1.1.5 2021-10-17T13:45:19,511 Found link https://files.pythonhosted.org/packages/e9/09/d2b32bb1f932169c2ab253770709574390604a0b44a5edb434823bfd9288/rdkit_to_params-1.1.6.tar.gz#sha256=637b341bc0b31ec3b26740be10630624e47145c9f10d9fa872d087052401635b (from https://pypi.org/simple/rdkit-to-params/) (requires-python:>3.6), version: 1.1.6 2021-10-17T13:45:19,511 Found link https://files.pythonhosted.org/packages/9b/40/43de495b2ef5baff0a174150f26801847d5147e810310d369d82751c8e85/rdkit_to_params-1.1.7.tar.gz#sha256=37cd4c7c940ccad422533c6a8485a111131f0c16e993c15baa71fa529e4fbc91 (from https://pypi.org/simple/rdkit-to-params/) (requires-python:>3.6), version: 1.1.7 2021-10-17T13:45:19,512 Found link https://files.pythonhosted.org/packages/c1/3d/842dffb9d05ee4dda2f199c4e145c443d203b16b6d08fa0e1a22351edf86/rdkit_to_params-1.1.8.tar.gz#sha256=f0e2130b3a9c48d56c7ed43aa1fdbc2c8ff1539c13ce56503f7a8383f5ab9a70 (from https://pypi.org/simple/rdkit-to-params/) (requires-python:>3.6), version: 1.1.8 2021-10-17T13:45:19,512 Found link https://files.pythonhosted.org/packages/00/56/156babfb42fdecf017703b966e539dd05effe4a6aac0bfe30821116f1fca/rdkit_to_params-1.1.9.tar.gz#sha256=735a16118ca30a64b1e012ec29f6c4dcc3dd35b0a1d1affdb152580d0d3ef045 (from https://pypi.org/simple/rdkit-to-params/) (requires-python:>3.6), version: 1.1.9 2021-10-17T13:45:19,513 Found link https://files.pythonhosted.org/packages/df/16/1439c9b0dec13b5d73fece2a25d9d88238165a34e51d0469554ef91a2e4b/rdkit_to_params-1.1.10.tar.gz#sha256=e3c0b209904bcbee4cdd84b643699f0f7faa20550e1397c7e2cfc4ef59a85faa (from https://pypi.org/simple/rdkit-to-params/) (requires-python:>3.6), version: 1.1.10 2021-10-17T13:45:19,513 Found link https://files.pythonhosted.org/packages/97/12/e05ada94bd934ec1afe13e09a8cda9f61bdb296476244bbd79d883f9ad67/rdkit_to_params-1.1.11.tar.gz#sha256=e17177c0b8b9b04ccefb7884878b24071c3f5a773a916c37028a64f48e74a6e5 (from https://pypi.org/simple/rdkit-to-params/) (requires-python:>3.6), version: 1.1.11 2021-10-17T13:45:19,514 Found link https://files.pythonhosted.org/packages/ad/43/ab5db3875a9e72588efce8885d135e0ec41db98cd84be2337510864a4d66/rdkit_to_params-1.1.12.tar.gz#sha256=f7410de7bd6a97366f5da2c705d7e690237f3a08a5c618f734fa3437bbabf20c (from https://pypi.org/simple/rdkit-to-params/) (requires-python:>3.6), version: 1.1.12 2021-10-17T13:45:19,514 Found link https://files.pythonhosted.org/packages/58/b8/f3db63a32ce0ca987585de2c98bab92372068b9601c6fcacc03fb215f8c6/rdkit_to_params-1.1.13.tar.gz#sha256=9b5c86c683ef83a4f6384a5fd181cc7dc5531c5d2ddd099e6eddce1e9db79ee1 (from https://pypi.org/simple/rdkit-to-params/) (requires-python:>3.6), version: 1.1.13 2021-10-17T13:45:19,515 Found link https://files.pythonhosted.org/packages/4c/58/0d978fda7cd7942bfd1bb72ad9f75a97eb65ef6f0fc9ba3c6b8bad2ad670/rdkit_to_params-1.1.14.tar.gz#sha256=a2387dc1ce009bf800fb7d891abb0457f82193aeb7c9866a6402d20218a12afd (from https://pypi.org/simple/rdkit-to-params/) (requires-python:>3.6), version: 1.1.14 2021-10-17T13:45:19,515 Fetching project page and analyzing links: https://www.piwheels.org/simple/rdkit-to-params/ 2021-10-17T13:45:19,516 Getting page https://www.piwheels.org/simple/rdkit-to-params/ 2021-10-17T13:45:19,517 Found index url https://www.piwheels.org/simple 2021-10-17T13:45:19,744 Skipping link: No binaries permitted for rdkit-to-params: https://www.piwheels.org/simple/rdkit-to-params/rdkit_to_params-1-py3-none-any.whl#sha256=6657d2d62068cdb2bec06ee2d8edc53ce830fc87c9ff2b6ffe68fbc417550476 (from https://www.piwheels.org/simple/rdkit-to-params/) (requires-python:>3.6) 2021-10-17T13:45:19,744 Skipping link: No binaries permitted for rdkit-to-params: https://www.piwheels.org/simple/rdkit-to-params/rdkit_to_params-1.0.2-py3-none-any.whl#sha256=e6d7aacfa7777780b46ad4e90da5fd087370a567e137f0ab208db5731e9ce5d5 (from https://www.piwheels.org/simple/rdkit-to-params/) (requires-python:>3.6) 2021-10-17T13:45:19,745 Skipping link: No binaries permitted for rdkit-to-params: https://www.piwheels.org/simple/rdkit-to-params/rdkit_to_params-1.0.4-py3-none-any.whl#sha256=50c8e0c31d854c285d64e183767427cce959be81177862fa7c46a46e0de9fefd (from https://www.piwheels.org/simple/rdkit-to-params/) (requires-python:>3.6) 2021-10-17T13:45:19,745 Skipping link: No binaries permitted for rdkit-to-params: https://www.piwheels.org/simple/rdkit-to-params/rdkit_to_params-1.0.5-py3-none-any.whl#sha256=0419d8696b50551e38f2d64f1d139ba461c4d17be145d970061ea103768669b8 (from https://www.piwheels.org/simple/rdkit-to-params/) (requires-python:>3.6) 2021-10-17T13:45:19,745 Skipping link: No binaries permitted for rdkit-to-params: https://www.piwheels.org/simple/rdkit-to-params/rdkit_to_params-1.1.0-py3-none-any.whl#sha256=dd0a4be42610277790d873ddfb3fce8d6943148e8dc48ed42021d36627c9e0c1 (from https://www.piwheels.org/simple/rdkit-to-params/) (requires-python:>3.6) 2021-10-17T13:45:19,745 Skipping link: No binaries permitted for rdkit-to-params: https://www.piwheels.org/simple/rdkit-to-params/rdkit_to_params-1.1.1-py3-none-any.whl#sha256=79c0e322a83b81bf5fd4f153d22621b738ac50075f917a629847c53cb368e09b (from https://www.piwheels.org/simple/rdkit-to-params/) (requires-python:>3.6) 2021-10-17T13:45:19,745 Skipping link: No binaries permitted for rdkit-to-params: https://www.piwheels.org/simple/rdkit-to-params/rdkit_to_params-1.1.10-py3-none-any.whl#sha256=309913f50f02dd2dd88767f302c746ed4135786cda27d084240033d7af7e3d62 (from https://www.piwheels.org/simple/rdkit-to-params/) (requires-python:>3.6) 2021-10-17T13:45:19,746 Skipping link: No binaries permitted for rdkit-to-params: https://www.piwheels.org/simple/rdkit-to-params/rdkit_to_params-1.1.11-py3-none-any.whl#sha256=7afdd64ac624b1fbce16d662c39408d8bdf545fd8e3d0330d9669d3d11d895be (from https://www.piwheels.org/simple/rdkit-to-params/) (requires-python:>3.6) 2021-10-17T13:45:19,746 Skipping link: No binaries permitted for rdkit-to-params: https://www.piwheels.org/simple/rdkit-to-params/rdkit_to_params-1.1.12-py3-none-any.whl#sha256=0d03ef046207ac83b9cf570e32bf0dc5cd95abae8d55527fe5f5ba66e2ea2ac2 (from https://www.piwheels.org/simple/rdkit-to-params/) (requires-python:>3.6) 2021-10-17T13:45:19,746 Skipping link: No binaries permitted for rdkit-to-params: https://www.piwheels.org/simple/rdkit-to-params/rdkit_to_params-1.1.13-py3-none-any.whl#sha256=bffd8b158f0074c2015a503feacbe4c7b716b996168154f92de579e059d0ecef (from https://www.piwheels.org/simple/rdkit-to-params/) (requires-python:>3.6) 2021-10-17T13:45:19,746 Skipping link: No binaries permitted for rdkit-to-params: https://www.piwheels.org/simple/rdkit-to-params/rdkit_to_params-1.1.2-py3-none-any.whl#sha256=9c037bd0f94acfa15a9725a2e3158b661f2d6534c1430fe90cbf6f8768abbf49 (from https://www.piwheels.org/simple/rdkit-to-params/) (requires-python:>3.6) 2021-10-17T13:45:19,747 Skipping link: No binaries permitted for rdkit-to-params: https://www.piwheels.org/simple/rdkit-to-params/rdkit_to_params-1.1.3-py3-none-any.whl#sha256=d657ea6ad426aeed46895b60377cad41bf7be74fa70a31a7d433e3892febbb1f (from https://www.piwheels.org/simple/rdkit-to-params/) (requires-python:>3.6) 2021-10-17T13:45:19,747 Skipping link: No binaries permitted for rdkit-to-params: https://www.piwheels.org/simple/rdkit-to-params/rdkit_to_params-1.1.4-py3-none-any.whl#sha256=45d32505d1b840d1821f255c96a156a4230156b842f6b2a0bef29f376af69394 (from https://www.piwheels.org/simple/rdkit-to-params/) (requires-python:>3.6) 2021-10-17T13:45:19,747 Skipping link: No binaries permitted for rdkit-to-params: https://www.piwheels.org/simple/rdkit-to-params/rdkit_to_params-1.1.4b0-py3-none-any.whl#sha256=68fba99b2bf0d110eba43fbc33896c770b3713f0b37736051b8c04e4ae23ad8b (from https://www.piwheels.org/simple/rdkit-to-params/) (requires-python:>3.6) 2021-10-17T13:45:19,747 Skipping link: No binaries permitted for rdkit-to-params: https://www.piwheels.org/simple/rdkit-to-params/rdkit_to_params-1.1.5-py3-none-any.whl#sha256=26ade56dd22354912f8ad6a7fa7dd17687c77194e8d98c13bba3007d7ad19d98 (from https://www.piwheels.org/simple/rdkit-to-params/) (requires-python:>3.6) 2021-10-17T13:45:19,747 Skipping link: No binaries permitted for rdkit-to-params: https://www.piwheels.org/simple/rdkit-to-params/rdkit_to_params-1.1.5b0-py3-none-any.whl#sha256=838de8cc29fd93d56b5f9b1dde19f77122535aea1d4b3ad588c2ab0bfea79847 (from https://www.piwheels.org/simple/rdkit-to-params/) (requires-python:>3.6) 2021-10-17T13:45:19,748 Skipping link: No binaries permitted for rdkit-to-params: https://www.piwheels.org/simple/rdkit-to-params/rdkit_to_params-1.1.6-py3-none-any.whl#sha256=7ee08391ee90a5415dbfb8d9ccc2615536cf8ba84b6d7b2c807e7327c76f12e6 (from https://www.piwheels.org/simple/rdkit-to-params/) (requires-python:>3.6) 2021-10-17T13:45:19,748 Skipping link: No binaries permitted for rdkit-to-params: https://www.piwheels.org/simple/rdkit-to-params/rdkit_to_params-1.1.7-py3-none-any.whl#sha256=5b1d7ea816db4c6a55cf4afc61dcfe4302f7792cd814df425386b006ce4ea144 (from https://www.piwheels.org/simple/rdkit-to-params/) (requires-python:>3.6) 2021-10-17T13:45:19,748 Skipping link: No binaries permitted for rdkit-to-params: https://www.piwheels.org/simple/rdkit-to-params/rdkit_to_params-1.1.8-py3-none-any.whl#sha256=5594f09bf20208b4a7d486c7c63da48097b4e393066fd280af45c98c07da6fe0 (from https://www.piwheels.org/simple/rdkit-to-params/) (requires-python:>3.6) 2021-10-17T13:45:19,748 Skipping link: No binaries permitted for rdkit-to-params: https://www.piwheels.org/simple/rdkit-to-params/rdkit_to_params-1.1.9-py3-none-any.whl#sha256=003ace8e736486b384c59c8969d0daacc1b5b51510ce639f8fae6194b988831a (from https://www.piwheels.org/simple/rdkit-to-params/) (requires-python:>3.6) 2021-10-17T13:45:19,749 Skipping link: not a file: https://www.piwheels.org/simple/rdkit-to-params/ 2021-10-17T13:45:19,749 Skipping link: not a file: https://pypi.org/simple/rdkit-to-params/ 2021-10-17T13:45:19,765 Given no hashes to check 1 links for project 'rdkit-to-params': discarding no candidates 2021-10-17T13:45:19,780 Collecting rdkit-to-params==1.1.14 2021-10-17T13:45:19,782 Created temporary directory: /tmp/pip-unpack-c8elrjck 2021-10-17T13:45:19,986 Downloading rdkit_to_params-1.1.14.tar.gz (45 kB) 2021-10-17T13:45:20,075 Added rdkit-to-params==1.1.14 from https://files.pythonhosted.org/packages/4c/58/0d978fda7cd7942bfd1bb72ad9f75a97eb65ef6f0fc9ba3c6b8bad2ad670/rdkit_to_params-1.1.14.tar.gz#sha256=a2387dc1ce009bf800fb7d891abb0457f82193aeb7c9866a6402d20218a12afd to build tracker '/tmp/pip-req-tracker-y51e92aa' 2021-10-17T13:45:20,076 Running setup.py (path:/tmp/pip-wheel-nqxpv97u/rdkit-to-params_127fd789daf04e9c8c10a2aee1d180f7/setup.py) egg_info for package rdkit-to-params 2021-10-17T13:45:20,077 Created temporary directory: /tmp/pip-pip-egg-info-r3dndtjm 2021-10-17T13:45:20,077 Running command python setup.py egg_info 2021-10-17T13:45:20,962 running egg_info 2021-10-17T13:45:20,965 creating /tmp/pip-pip-egg-info-r3dndtjm/rdkit_to_params.egg-info 2021-10-17T13:45:20,966 writing /tmp/pip-pip-egg-info-r3dndtjm/rdkit_to_params.egg-info/PKG-INFO 2021-10-17T13:45:20,969 writing dependency_links to /tmp/pip-pip-egg-info-r3dndtjm/rdkit_to_params.egg-info/dependency_links.txt 2021-10-17T13:45:20,971 writing entry points to /tmp/pip-pip-egg-info-r3dndtjm/rdkit_to_params.egg-info/entry_points.txt 2021-10-17T13:45:20,973 writing top-level names to /tmp/pip-pip-egg-info-r3dndtjm/rdkit_to_params.egg-info/top_level.txt 2021-10-17T13:45:20,975 writing manifest file '/tmp/pip-pip-egg-info-r3dndtjm/rdkit_to_params.egg-info/SOURCES.txt' 2021-10-17T13:45:21,119 reading manifest file '/tmp/pip-pip-egg-info-r3dndtjm/rdkit_to_params.egg-info/SOURCES.txt' 2021-10-17T13:45:21,123 writing manifest file '/tmp/pip-pip-egg-info-r3dndtjm/rdkit_to_params.egg-info/SOURCES.txt' 2021-10-17T13:45:21,124 /tmp/pip-wheel-nqxpv97u/rdkit-to-params_127fd789daf04e9c8c10a2aee1d180f7/setup.py:30: UserWarning: Albeit optional, a lot of this code relies on rdkit which cannot be pip installed.To install try either conda install -c conda-forge rdkit or sudo apt-get/brew install python3-rdkit or visit rdkit documentation.or use the new pip install rdkit-pypi 2021-10-17T13:45:21,124 'sudo apt-get/brew install python3-rdkit or visit rdkit documentation.' + 2021-10-17T13:45:21,125 /tmp/pip-wheel-nqxpv97u/rdkit-to-params_127fd789daf04e9c8c10a2aee1d180f7/setup.py:35: UserWarning: The minimisation part of this code uses pyrosetta, which has to be downloaded from the Rosetta software site due to licencing. Without it only the classes Monster and Rectifier will work 2021-10-17T13:45:21,125 warn('The minimisation part of this code uses pyrosetta, which has to be downloaded from ' + 2021-10-17T13:45:21,187 Source in /tmp/pip-wheel-nqxpv97u/rdkit-to-params_127fd789daf04e9c8c10a2aee1d180f7 has version 1.1.14, which satisfies requirement rdkit-to-params==1.1.14 from https://files.pythonhosted.org/packages/4c/58/0d978fda7cd7942bfd1bb72ad9f75a97eb65ef6f0fc9ba3c6b8bad2ad670/rdkit_to_params-1.1.14.tar.gz#sha256=a2387dc1ce009bf800fb7d891abb0457f82193aeb7c9866a6402d20218a12afd 2021-10-17T13:45:21,188 Removed rdkit-to-params==1.1.14 from https://files.pythonhosted.org/packages/4c/58/0d978fda7cd7942bfd1bb72ad9f75a97eb65ef6f0fc9ba3c6b8bad2ad670/rdkit_to_params-1.1.14.tar.gz#sha256=a2387dc1ce009bf800fb7d891abb0457f82193aeb7c9866a6402d20218a12afd from build tracker '/tmp/pip-req-tracker-y51e92aa' 2021-10-17T13:45:21,196 Created temporary directory: /tmp/pip-unpack-7n375t10 2021-10-17T13:45:21,196 Building wheels for collected packages: rdkit-to-params 2021-10-17T13:45:21,201 Created temporary directory: /tmp/pip-wheel-r0ntidfx 2021-10-17T13:45:21,202 Building wheel for rdkit-to-params (setup.py): started 2021-10-17T13:45:21,202 Destination directory: /tmp/pip-wheel-r0ntidfx 2021-10-17T13:45:21,202 Running command /usr/bin/python3 -u -c 'import io, os, sys, setuptools, tokenize; sys.argv[0] = '"'"'/tmp/pip-wheel-nqxpv97u/rdkit-to-params_127fd789daf04e9c8c10a2aee1d180f7/setup.py'"'"'; __file__='"'"'/tmp/pip-wheel-nqxpv97u/rdkit-to-params_127fd789daf04e9c8c10a2aee1d180f7/setup.py'"'"';f = getattr(tokenize, '"'"'open'"'"', open)(__file__) if os.path.exists(__file__) else io.StringIO('"'"'from setuptools import setup; setup()'"'"');code = f.read().replace('"'"'\r\n'"'"', '"'"'\n'"'"');f.close();exec(compile(code, __file__, '"'"'exec'"'"'))' bdist_wheel -d /tmp/pip-wheel-r0ntidfx 2021-10-17T13:45:21,918 /tmp/pip-wheel-nqxpv97u/rdkit-to-params_127fd789daf04e9c8c10a2aee1d180f7/setup.py:30: UserWarning: Albeit optional, a lot of this code relies on rdkit which cannot be pip installed.To install try either conda install -c conda-forge rdkit or sudo apt-get/brew install python3-rdkit or visit rdkit documentation.or use the new pip install rdkit-pypi 2021-10-17T13:45:21,919 'sudo apt-get/brew install python3-rdkit or visit rdkit documentation.' + 2021-10-17T13:45:21,919 /tmp/pip-wheel-nqxpv97u/rdkit-to-params_127fd789daf04e9c8c10a2aee1d180f7/setup.py:35: UserWarning: The minimisation part of this code uses pyrosetta, which has to be downloaded from the Rosetta software site due to licencing. Without it only the classes Monster and Rectifier will work 2021-10-17T13:45:21,919 warn('The minimisation part of this code uses pyrosetta, which has to be downloaded from ' + 2021-10-17T13:45:22,083 running bdist_wheel 2021-10-17T13:45:22,088 running build 2021-10-17T13:45:22,088 running build_py 2021-10-17T13:45:22,214 creating build 2021-10-17T13:45:22,214 creating build/lib 2021-10-17T13:45:22,215 creating build/lib/rdkit_to_params 2021-10-17T13:45:22,216 copying rdkit_to_params/__init__.py -> build/lib/rdkit_to_params 2021-10-17T13:45:22,219 copying rdkit_to_params/constraint.py -> build/lib/rdkit_to_params 2021-10-17T13:45:22,222 copying rdkit_to_params/version.py -> build/lib/rdkit_to_params 2021-10-17T13:45:22,223 copying rdkit_to_params/_init_mixin.py -> build/lib/rdkit_to_params 2021-10-17T13:45:22,225 copying rdkit_to_params/entries.py -> build/lib/rdkit_to_params 2021-10-17T13:45:22,228 copying rdkit_to_params/_pyrosetta_mixin.py -> build/lib/rdkit_to_params 2021-10-17T13:45:22,230 copying rdkit_to_params/_io_mixin.py -> build/lib/rdkit_to_params 2021-10-17T13:45:22,232 creating build/lib/tests 2021-10-17T13:45:22,233 copying tests/__init__.py -> build/lib/tests 2021-10-17T13:45:22,236 creating build/lib/rdkit_to_params/cli 2021-10-17T13:45:22,237 copying rdkit_to_params/cli/__init__.py -> build/lib/rdkit_to_params/cli 2021-10-17T13:45:22,240 creating build/lib/rdkit_to_params/rdkitside 2021-10-17T13:45:22,241 copying rdkit_to_params/rdkitside/_rdkit_rename.py -> build/lib/rdkit_to_params/rdkitside 2021-10-17T13:45:22,244 copying rdkit_to_params/rdkitside/utilities.py -> build/lib/rdkit_to_params/rdkitside 2021-10-17T13:45:22,246 copying rdkit_to_params/rdkitside/_rdkit_prep.py -> build/lib/rdkit_to_params/rdkitside 2021-10-17T13:45:22,250 copying rdkit_to_params/rdkitside/__init__.py -> build/lib/rdkit_to_params/rdkitside 2021-10-17T13:45:22,252 copying rdkit_to_params/rdkitside/_rdkit_inits.py -> build/lib/rdkit_to_params/rdkitside 2021-10-17T13:45:22,254 copying rdkit_to_params/rdkitside/_rdkit_convert.py -> build/lib/rdkit_to_params/rdkitside 2021-10-17T13:45:22,266 installing to build/bdist.linux-armv7l/wheel 2021-10-17T13:45:22,267 running install 2021-10-17T13:45:22,268 running install_lib 2021-10-17T13:45:22,273 creating build/bdist.linux-armv7l 2021-10-17T13:45:22,273 creating build/bdist.linux-armv7l/wheel 2021-10-17T13:45:22,275 creating build/bdist.linux-armv7l/wheel/rdkit_to_params 2021-10-17T13:45:22,277 creating build/bdist.linux-armv7l/wheel/rdkit_to_params/cli 2021-10-17T13:45:22,278 copying build/lib/rdkit_to_params/cli/__init__.py -> build/bdist.linux-armv7l/wheel/rdkit_to_params/cli 2021-10-17T13:45:22,281 creating build/bdist.linux-armv7l/wheel/rdkit_to_params/rdkitside 2021-10-17T13:45:22,282 copying build/lib/rdkit_to_params/rdkitside/_rdkit_rename.py -> build/bdist.linux-armv7l/wheel/rdkit_to_params/rdkitside 2021-10-17T13:45:22,284 copying build/lib/rdkit_to_params/rdkitside/utilities.py -> build/bdist.linux-armv7l/wheel/rdkit_to_params/rdkitside 2021-10-17T13:45:22,287 copying build/lib/rdkit_to_params/rdkitside/_rdkit_prep.py -> build/bdist.linux-armv7l/wheel/rdkit_to_params/rdkitside 2021-10-17T13:45:22,290 copying build/lib/rdkit_to_params/rdkitside/__init__.py -> build/bdist.linux-armv7l/wheel/rdkit_to_params/rdkitside 2021-10-17T13:45:22,292 copying build/lib/rdkit_to_params/rdkitside/_rdkit_inits.py -> build/bdist.linux-armv7l/wheel/rdkit_to_params/rdkitside 2021-10-17T13:45:22,295 copying build/lib/rdkit_to_params/rdkitside/_rdkit_convert.py -> build/bdist.linux-armv7l/wheel/rdkit_to_params/rdkitside 2021-10-17T13:45:22,298 copying build/lib/rdkit_to_params/__init__.py -> build/bdist.linux-armv7l/wheel/rdkit_to_params 2021-10-17T13:45:22,301 copying build/lib/rdkit_to_params/constraint.py -> build/bdist.linux-armv7l/wheel/rdkit_to_params 2021-10-17T13:45:22,304 copying build/lib/rdkit_to_params/version.py -> build/bdist.linux-armv7l/wheel/rdkit_to_params 2021-10-17T13:45:22,306 copying build/lib/rdkit_to_params/_init_mixin.py -> build/bdist.linux-armv7l/wheel/rdkit_to_params 2021-10-17T13:45:22,308 copying build/lib/rdkit_to_params/entries.py -> build/bdist.linux-armv7l/wheel/rdkit_to_params 2021-10-17T13:45:22,311 copying build/lib/rdkit_to_params/_pyrosetta_mixin.py -> build/bdist.linux-armv7l/wheel/rdkit_to_params 2021-10-17T13:45:22,313 copying build/lib/rdkit_to_params/_io_mixin.py -> build/bdist.linux-armv7l/wheel/rdkit_to_params 2021-10-17T13:45:22,316 creating build/bdist.linux-armv7l/wheel/tests 2021-10-17T13:45:22,317 copying build/lib/tests/__init__.py -> build/bdist.linux-armv7l/wheel/tests 2021-10-17T13:45:22,319 running install_egg_info 2021-10-17T13:45:22,342 running egg_info 2021-10-17T13:45:22,342 writing rdkit_to_params.egg-info/PKG-INFO 2021-10-17T13:45:22,345 writing dependency_links to rdkit_to_params.egg-info/dependency_links.txt 2021-10-17T13:45:22,347 writing entry points to rdkit_to_params.egg-info/entry_points.txt 2021-10-17T13:45:22,348 writing top-level names to rdkit_to_params.egg-info/top_level.txt 2021-10-17T13:45:22,355 reading manifest file 'rdkit_to_params.egg-info/SOURCES.txt' 2021-10-17T13:45:22,360 writing manifest file 'rdkit_to_params.egg-info/SOURCES.txt' 2021-10-17T13:45:22,361 Copying rdkit_to_params.egg-info to build/bdist.linux-armv7l/wheel/rdkit_to_params-1.1.14-py3.7.egg-info 2021-10-17T13:45:22,373 running install_scripts 2021-10-17T13:45:22,450 creating build/bdist.linux-armv7l/wheel/rdkit_to_params-1.1.14.dist-info/WHEEL 2021-10-17T13:45:22,453 creating '/tmp/pip-wheel-r0ntidfx/rdkit_to_params-1.1.14-py3-none-any.whl' and adding 'build/bdist.linux-armv7l/wheel' to it 2021-10-17T13:45:22,457 adding 'rdkit_to_params/__init__.py' 2021-10-17T13:45:22,459 adding 'rdkit_to_params/_init_mixin.py' 2021-10-17T13:45:22,461 adding 'rdkit_to_params/_io_mixin.py' 2021-10-17T13:45:22,462 adding 'rdkit_to_params/_pyrosetta_mixin.py' 2021-10-17T13:45:22,465 adding 'rdkit_to_params/constraint.py' 2021-10-17T13:45:22,468 adding 'rdkit_to_params/entries.py' 2021-10-17T13:45:22,470 adding 'rdkit_to_params/version.py' 2021-10-17T13:45:22,472 adding 'rdkit_to_params/cli/__init__.py' 2021-10-17T13:45:22,474 adding 'rdkit_to_params/rdkitside/__init__.py' 2021-10-17T13:45:22,477 adding 'rdkit_to_params/rdkitside/_rdkit_convert.py' 2021-10-17T13:45:22,479 adding 'rdkit_to_params/rdkitside/_rdkit_inits.py' 2021-10-17T13:45:22,482 adding 'rdkit_to_params/rdkitside/_rdkit_prep.py' 2021-10-17T13:45:22,484 adding 'rdkit_to_params/rdkitside/_rdkit_rename.py' 2021-10-17T13:45:22,486 adding 'rdkit_to_params/rdkitside/utilities.py' 2021-10-17T13:45:22,489 adding 'tests/__init__.py' 2021-10-17T13:45:22,491 adding 'rdkit_to_params-1.1.14.dist-info/METADATA' 2021-10-17T13:45:22,492 adding 'rdkit_to_params-1.1.14.dist-info/WHEEL' 2021-10-17T13:45:22,493 adding 'rdkit_to_params-1.1.14.dist-info/entry_points.txt' 2021-10-17T13:45:22,494 adding 'rdkit_to_params-1.1.14.dist-info/top_level.txt' 2021-10-17T13:45:22,494 adding 'rdkit_to_params-1.1.14.dist-info/RECORD' 2021-10-17T13:45:22,496 removing build/bdist.linux-armv7l/wheel 2021-10-17T13:45:22,573 Building wheel for rdkit-to-params (setup.py): finished with status 'done' 2021-10-17T13:45:22,576 Created wheel for rdkit-to-params: filename=rdkit_to_params-1.1.14-py3-none-any.whl size=45476 sha256=7b541fb19bf16cf9415393b3939ac87fa1a54fe96f53a8c48857f91a2bf1eef7 2021-10-17T13:45:22,576 Stored in directory: /tmp/pip-ephem-wheel-cache-slpwzbcq/wheels/8d/0e/72/9a2328a7728cd177c229f2dc5470ecf6e1bfbe09a681804d5f 2021-10-17T13:45:22,588 Successfully built rdkit-to-params 2021-10-17T13:45:22,593 Removed build tracker: '/tmp/pip-req-tracker-y51e92aa'