2021-10-22T14:14:54,080 Created temporary directory: /tmp/pip-ephem-wheel-cache-lox1l8fv 2021-10-22T14:14:54,084 Created temporary directory: /tmp/pip-req-tracker-1m7ucbpq 2021-10-22T14:14:54,084 Initialized build tracking at /tmp/pip-req-tracker-1m7ucbpq 2021-10-22T14:14:54,084 Created build tracker: /tmp/pip-req-tracker-1m7ucbpq 2021-10-22T14:14:54,085 Entered build tracker: /tmp/pip-req-tracker-1m7ucbpq 2021-10-22T14:14:54,085 Created temporary directory: /tmp/pip-wheel-z30gs___ 2021-10-22T14:14:54,122 Looking in indexes: https://pypi.org/simple, https://www.piwheels.org/simple 2021-10-22T14:14:54,125 2 location(s) to search for versions of stko: 2021-10-22T14:14:54,125 * https://pypi.org/simple/stko/ 2021-10-22T14:14:54,125 * https://www.piwheels.org/simple/stko/ 2021-10-22T14:14:54,126 Fetching project page and analyzing links: https://pypi.org/simple/stko/ 2021-10-22T14:14:54,126 Getting page https://pypi.org/simple/stko/ 2021-10-22T14:14:54,128 Found index url https://pypi.org/simple 2021-10-22T14:14:54,225 Skipping link: No binaries permitted for stko: https://files.pythonhosted.org/packages/79/3c/f100ec7237764b86d99437fc9b73b2d7db0e36130404702b3047a8652e33/stko-0.0.1-py3-none-any.whl#sha256=0f644b9d942afe4ae773bfed1b82d51da3c5f40f293d65f05e5202b77febaf20 (from https://pypi.org/simple/stko/) (requires-python:>=3.6) 2021-10-22T14:14:54,226 Found link https://files.pythonhosted.org/packages/49/f4/25035d11c4d59e195cdc9f80fb73a856f1ff0af9c80671d49109d2f86e5e/stko-0.0.1.tar.gz#sha256=e6285004915d1b8cbdfe8cfc6e5da9f988daa58980afe06723556b6d76cc2edb (from https://pypi.org/simple/stko/) (requires-python:>=3.6), version: 0.0.1 2021-10-22T14:14:54,227 Skipping link: No binaries permitted for stko: https://files.pythonhosted.org/packages/48/06/0f3151827e4540e0d8487b9beac2aa1d260ad84886c9147e8ad1b0db079f/stko-0.0.2-py3-none-any.whl#sha256=0f63adb67bd8c389aa0b8e634bade015feca94adaff80a70368630ac955cabf5 (from https://pypi.org/simple/stko/) (requires-python:>=3.6) 2021-10-22T14:14:54,227 Found link https://files.pythonhosted.org/packages/f0/32/9c3b005aa040871099082ff9aac21201b2553a01e5b7c5965f5d80c25ad4/stko-0.0.2.tar.gz#sha256=bc437c0f8affeaa4f8473637f770757c4939d66380dee07ed76c522fcd3bf0ed (from https://pypi.org/simple/stko/) (requires-python:>=3.6), version: 0.0.2 2021-10-22T14:14:54,227 Skipping link: No binaries permitted for stko: https://files.pythonhosted.org/packages/f0/cf/86f557dfcb6a0a51f4b0bafecf420222b2cd1028fe2bc16c1b4793d33ceb/stko-0.0.4-py3-none-any.whl#sha256=49f5ef03d469292612ad8e7f4e4d2916b0465f7ddd8b7cddbf42722d2b23b87b (from https://pypi.org/simple/stko/) (requires-python:>=3.6) 2021-10-22T14:14:54,228 Found link https://files.pythonhosted.org/packages/c8/83/b490152d733bc042c7c18bd8cfd84e6d66987b2bdba458669a547f968107/stko-0.0.4.tar.gz#sha256=01f1518d4b29f6738fdeacd147a73bfe41386ec882331ac70d342c8c0d5eb4fc (from https://pypi.org/simple/stko/) (requires-python:>=3.6), version: 0.0.4 2021-10-22T14:14:54,228 Skipping link: No binaries permitted for stko: https://files.pythonhosted.org/packages/2f/af/456987b400232df145177f9d4789ead8593d1b3dcd42e4c94ac2b41b9cdd/stko-0.0.31-py3-none-any.whl#sha256=e2a13577dd6b2d18a0ea109d88873f660f255aeee3233287318ba5ba17c8665f (from https://pypi.org/simple/stko/) (requires-python:>=3.6) 2021-10-22T14:14:54,229 Found link https://files.pythonhosted.org/packages/85/28/1e0efb4291caf8e00dafb6e036c3103cfed7b29423cdb564fac1ff746e4b/stko-0.0.31.tar.gz#sha256=0ee7499eb87b4efd16f535b13ad162c817223172eb605a2824a58c711e783132 (from https://pypi.org/simple/stko/) (requires-python:>=3.6), version: 0.0.31 2021-10-22T14:14:54,229 Skipping link: No binaries permitted for stko: https://files.pythonhosted.org/packages/57/b9/7e0a34f4ab21edba4b732b1cca4b6fc934d847c9f1c2b988dbaf6e06a611/stko-0.0.32-py3-none-any.whl#sha256=2abb07563ebf042f2e3ac82171daa0ff0145fef4b4951113ea51eb7d5c8a86b4 (from https://pypi.org/simple/stko/) (requires-python:>=3.6) 2021-10-22T14:14:54,230 Found link https://files.pythonhosted.org/packages/67/20/5dcc11b1a6ba07d2a2b173541fcfe774cca0094ec4310042f70411484cf5/stko-0.0.32.tar.gz#sha256=d9fcc57ffbcf3861a1add1d2293386950548bc4709871286340fb3db1c066d26 (from https://pypi.org/simple/stko/) (requires-python:>=3.6), version: 0.0.32 2021-10-22T14:14:54,230 Skipping link: No binaries permitted for stko: https://files.pythonhosted.org/packages/cf/5f/d588525d0fed2c6db1d2b7c1b7dce48ca3cd8fb07c29ee97885cdfbd4122/stko-0.0.33-py3-none-any.whl#sha256=dfdaf56253c55c37f01d657f666fbb9ead0dea7f06c2aced0f7fb5896a1af34e (from https://pypi.org/simple/stko/) (requires-python:>=3.6) 2021-10-22T14:14:54,231 Found link https://files.pythonhosted.org/packages/bd/89/692c2b16ec0771dcf179ebd8f0c6b8f33bfe3d5b6692adb82e9f7371643e/stko-0.0.33.tar.gz#sha256=f1f787aea1615053198785d2164bc912f188f4c2de1582fd66c31dd4eaf28a33 (from https://pypi.org/simple/stko/) (requires-python:>=3.6), version: 0.0.33 2021-10-22T14:14:54,231 Skipping link: No binaries permitted for stko: https://files.pythonhosted.org/packages/1c/65/8724f6f1345ea888535c02e2b6c7b661e07c9c4653d2cf03fa2f11874534/stko-0.0.35-py3-none-any.whl#sha256=05517e0e9d6865409a21a8de5a94d9de9e053fc8ba3269d70d677d593f86b713 (from https://pypi.org/simple/stko/) (requires-python:>=3.6) 2021-10-22T14:14:54,231 Found link https://files.pythonhosted.org/packages/fd/bc/6c2f84797e08e7ef8417678eec450eb045166cfb1f3b0b9fa02d8b3ee5fc/stko-0.0.35.tar.gz#sha256=e5b3d14146df866f281c83ba888c8b3ab937c04a665fc5305699161618c016fa (from https://pypi.org/simple/stko/) (requires-python:>=3.6), version: 0.0.35 2021-10-22T14:14:54,232 Skipping link: No binaries permitted for stko: https://files.pythonhosted.org/packages/0a/57/38fed7d235d1da17107e26979733370a1e93de992039f815ea13da2d3ec5/stko-0.0.36-py3-none-any.whl#sha256=00f1ee89fd1cc84d9308ec9c5abe72ff61fa2df3e2ab3af48e1cf7ab09b174f0 (from https://pypi.org/simple/stko/) (requires-python:>=3.6) 2021-10-22T14:14:54,232 Found link https://files.pythonhosted.org/packages/06/6f/6379235d7fb1e37f09d3dafbfd2d4f7ae8e38d9317cf346c99109f0cf83b/stko-0.0.36.tar.gz#sha256=ae17a3f2216d47df9e3a29f9b62813ff4f756c79f35cff09ea2e0e76d76adccf (from https://pypi.org/simple/stko/) (requires-python:>=3.6), version: 0.0.36 2021-10-22T14:14:54,233 Fetching project page and analyzing links: https://www.piwheels.org/simple/stko/ 2021-10-22T14:14:54,233 Getting page https://www.piwheels.org/simple/stko/ 2021-10-22T14:14:54,234 Found index url https://www.piwheels.org/simple 2021-10-22T14:14:54,411 Skipping link: No binaries permitted for stko: https://www.piwheels.org/simple/stko/stko-0.0.1-py3-none-any.whl#sha256=11ce5faa3c17df9f760e3d67a85110f8ffb9a5a27232105947cdd0ab491f9b92 (from https://www.piwheels.org/simple/stko/) (requires-python:>=3.6) 2021-10-22T14:14:54,411 Skipping link: No binaries permitted for stko: https://www.piwheels.org/simple/stko/stko-0.0.2-py3-none-any.whl#sha256=c2210f1ed34091a9ee4fc303649ff9e0ab16aad39b7fc0018a44c164f1c3276a (from https://www.piwheels.org/simple/stko/) (requires-python:>=3.6) 2021-10-22T14:14:54,412 Skipping link: No binaries permitted for stko: https://www.piwheels.org/simple/stko/stko-0.0.31-py3-none-any.whl#sha256=e2a13577dd6b2d18a0ea109d88873f660f255aeee3233287318ba5ba17c8665f (from https://www.piwheels.org/simple/stko/) (requires-python:>=3.6) 2021-10-22T14:14:54,412 Skipping link: No binaries permitted for stko: https://www.piwheels.org/simple/stko/stko-0.0.32-py3-none-any.whl#sha256=2abb07563ebf042f2e3ac82171daa0ff0145fef4b4951113ea51eb7d5c8a86b4 (from https://www.piwheels.org/simple/stko/) (requires-python:>=3.6) 2021-10-22T14:14:54,412 Skipping link: No binaries permitted for stko: https://www.piwheels.org/simple/stko/stko-0.0.33-py3-none-any.whl#sha256=dfdaf56253c55c37f01d657f666fbb9ead0dea7f06c2aced0f7fb5896a1af34e (from https://www.piwheels.org/simple/stko/) (requires-python:>=3.6) 2021-10-22T14:14:54,412 Skipping link: No binaries permitted for stko: https://www.piwheels.org/simple/stko/stko-0.0.35-py3-none-any.whl#sha256=05517e0e9d6865409a21a8de5a94d9de9e053fc8ba3269d70d677d593f86b713 (from https://www.piwheels.org/simple/stko/) (requires-python:>=3.6) 2021-10-22T14:14:54,412 Skipping link: No binaries permitted for stko: https://www.piwheels.org/simple/stko/stko-0.0.4-py3-none-any.whl#sha256=49f5ef03d469292612ad8e7f4e4d2916b0465f7ddd8b7cddbf42722d2b23b87b (from https://www.piwheels.org/simple/stko/) (requires-python:>=3.6) 2021-10-22T14:14:54,413 Skipping link: not a file: https://www.piwheels.org/simple/stko/ 2021-10-22T14:14:54,413 Skipping link: not a file: https://pypi.org/simple/stko/ 2021-10-22T14:14:54,429 Given no hashes to check 1 links for project 'stko': discarding no candidates 2021-10-22T14:14:54,443 Collecting stko==0.0.36 2021-10-22T14:14:54,445 Created temporary directory: /tmp/pip-unpack-4wumqjs8 2021-10-22T14:14:54,620 Downloading stko-0.0.36.tar.gz (64 kB) 2021-10-22T14:14:54,803 Added stko==0.0.36 from https://files.pythonhosted.org/packages/06/6f/6379235d7fb1e37f09d3dafbfd2d4f7ae8e38d9317cf346c99109f0cf83b/stko-0.0.36.tar.gz#sha256=ae17a3f2216d47df9e3a29f9b62813ff4f756c79f35cff09ea2e0e76d76adccf to build tracker '/tmp/pip-req-tracker-1m7ucbpq' 2021-10-22T14:14:54,804 Running setup.py (path:/tmp/pip-wheel-z30gs___/stko_9afb59ff0b0b4c01833daa914631119a/setup.py) egg_info for package stko 2021-10-22T14:14:54,805 Created temporary directory: /tmp/pip-pip-egg-info-ot9e6tqt 2021-10-22T14:14:54,805 Running command python setup.py egg_info 2021-10-22T14:14:55,742 running egg_info 2021-10-22T14:14:55,744 creating /tmp/pip-pip-egg-info-ot9e6tqt/stko.egg-info 2021-10-22T14:14:55,745 writing /tmp/pip-pip-egg-info-ot9e6tqt/stko.egg-info/PKG-INFO 2021-10-22T14:14:55,747 writing dependency_links to /tmp/pip-pip-egg-info-ot9e6tqt/stko.egg-info/dependency_links.txt 2021-10-22T14:14:55,750 writing requirements to /tmp/pip-pip-egg-info-ot9e6tqt/stko.egg-info/requires.txt 2021-10-22T14:14:55,750 writing top-level names to /tmp/pip-pip-egg-info-ot9e6tqt/stko.egg-info/top_level.txt 2021-10-22T14:14:55,752 writing manifest file '/tmp/pip-pip-egg-info-ot9e6tqt/stko.egg-info/SOURCES.txt' 2021-10-22T14:14:55,897 reading manifest file '/tmp/pip-pip-egg-info-ot9e6tqt/stko.egg-info/SOURCES.txt' 2021-10-22T14:14:55,899 adding license file 'LICENSE' 2021-10-22T14:14:55,903 writing manifest file '/tmp/pip-pip-egg-info-ot9e6tqt/stko.egg-info/SOURCES.txt' 2021-10-22T14:14:55,966 Source in /tmp/pip-wheel-z30gs___/stko_9afb59ff0b0b4c01833daa914631119a has version 0.0.36, which satisfies requirement stko==0.0.36 from https://files.pythonhosted.org/packages/06/6f/6379235d7fb1e37f09d3dafbfd2d4f7ae8e38d9317cf346c99109f0cf83b/stko-0.0.36.tar.gz#sha256=ae17a3f2216d47df9e3a29f9b62813ff4f756c79f35cff09ea2e0e76d76adccf 2021-10-22T14:14:55,967 Removed stko==0.0.36 from https://files.pythonhosted.org/packages/06/6f/6379235d7fb1e37f09d3dafbfd2d4f7ae8e38d9317cf346c99109f0cf83b/stko-0.0.36.tar.gz#sha256=ae17a3f2216d47df9e3a29f9b62813ff4f756c79f35cff09ea2e0e76d76adccf from build tracker '/tmp/pip-req-tracker-1m7ucbpq' 2021-10-22T14:14:55,973 Created temporary directory: /tmp/pip-unpack-oe4nyjy3 2021-10-22T14:14:55,974 Building wheels for collected packages: stko 2021-10-22T14:14:55,978 Created temporary directory: /tmp/pip-wheel-nwcws6b0 2021-10-22T14:14:55,979 Building wheel for stko (setup.py): started 2021-10-22T14:14:55,979 Destination directory: /tmp/pip-wheel-nwcws6b0 2021-10-22T14:14:55,979 Running command /usr/bin/python3 -u -c 'import io, os, sys, setuptools, tokenize; sys.argv[0] = '"'"'/tmp/pip-wheel-z30gs___/stko_9afb59ff0b0b4c01833daa914631119a/setup.py'"'"'; __file__='"'"'/tmp/pip-wheel-z30gs___/stko_9afb59ff0b0b4c01833daa914631119a/setup.py'"'"';f = getattr(tokenize, '"'"'open'"'"', open)(__file__) if os.path.exists(__file__) else io.StringIO('"'"'from setuptools import setup; setup()'"'"');code = f.read().replace('"'"'\r\n'"'"', '"'"'\n'"'"');f.close();exec(compile(code, __file__, '"'"'exec'"'"'))' bdist_wheel -d /tmp/pip-wheel-nwcws6b0 2021-10-22T14:14:56,894 running bdist_wheel 2021-10-22T14:14:56,899 running build 2021-10-22T14:14:56,899 running build_py 2021-10-22T14:14:57,025 creating build 2021-10-22T14:14:57,025 creating build/lib 2021-10-22T14:14:57,026 creating build/lib/tests 2021-10-22T14:14:57,027 copying tests/__init__.py -> build/lib/tests 2021-10-22T14:14:57,028 copying tests/conftest.py -> build/lib/tests 2021-10-22T14:14:57,030 creating build/lib/stko 2021-10-22T14:14:57,031 copying stko/__init__.py -> build/lib/stko 2021-10-22T14:14:57,033 creating build/lib/tests/molecular 2021-10-22T14:14:57,034 copying tests/molecular/__init__.py -> build/lib/tests/molecular 2021-10-22T14:14:57,036 creating build/lib/tests/optimizers 2021-10-22T14:14:57,037 copying tests/optimizers/test_uff_assign_ff.py -> build/lib/tests/optimizers 2021-10-22T14:14:57,040 copying tests/optimizers/__init__.py -> build/lib/tests/optimizers 2021-10-22T14:14:57,041 copying tests/optimizers/test_optimizers.py -> build/lib/tests/optimizers 2021-10-22T14:14:57,043 copying tests/optimizers/conftest.py -> build/lib/tests/optimizers 2021-10-22T14:14:57,045 copying tests/optimizers/utilities.py -> build/lib/tests/optimizers 2021-10-22T14:14:57,047 copying tests/optimizers/test_gulp.py -> build/lib/tests/optimizers 2021-10-22T14:14:57,049 copying tests/optimizers/test_rdkit_optimizers.py -> build/lib/tests/optimizers 2021-10-22T14:14:57,052 creating build/lib/tests/molecular/z_matrix 2021-10-22T14:14:57,053 copying tests/molecular/z_matrix/test_zmatrix.py -> build/lib/tests/molecular/z_matrix 2021-10-22T14:14:57,055 copying tests/molecular/z_matrix/__init__.py -> build/lib/tests/molecular/z_matrix 2021-10-22T14:14:57,057 copying tests/molecular/z_matrix/conftest.py -> build/lib/tests/molecular/z_matrix 2021-10-22T14:14:57,059 copying tests/molecular/z_matrix/case_data.py -> build/lib/tests/molecular/z_matrix 2021-10-22T14:14:57,062 creating build/lib/tests/optimizers/macromodel_optimizers 2021-10-22T14:14:57,063 copying tests/optimizers/macromodel_optimizers/__init__.py -> build/lib/tests/optimizers/macromodel_optimizers 2021-10-22T14:14:57,065 copying tests/optimizers/macromodel_optimizers/test_macromodel.py -> build/lib/tests/optimizers/macromodel_optimizers 2021-10-22T14:14:57,067 creating build/lib/stko/molecular 2021-10-22T14:14:57,068 copying stko/molecular/__init__.py -> build/lib/stko/molecular 2021-10-22T14:14:57,071 creating build/lib/stko/utilities 2021-10-22T14:14:57,072 copying stko/utilities/__init__.py -> build/lib/stko/utilities 2021-10-22T14:14:57,075 copying stko/utilities/utilities.py -> build/lib/stko/utilities 2021-10-22T14:14:57,079 creating build/lib/stko/calculators 2021-10-22T14:14:57,080 copying stko/calculators/rdkit_calculators.py -> build/lib/stko/calculators 2021-10-22T14:14:57,083 copying stko/calculators/__init__.py -> build/lib/stko/calculators 2021-10-22T14:14:57,085 copying stko/calculators/orca_calculators.py -> build/lib/stko/calculators 2021-10-22T14:14:57,087 copying stko/calculators/torsion_calculators.py -> build/lib/stko/calculators 2021-10-22T14:14:57,090 copying stko/calculators/calculators.py -> build/lib/stko/calculators 2021-10-22T14:14:57,092 copying stko/calculators/shape_calculators.py -> build/lib/stko/calculators 2021-10-22T14:14:57,094 copying stko/calculators/xtb_calculators.py -> build/lib/stko/calculators 2021-10-22T14:14:57,098 creating build/lib/stko/optimizers 2021-10-22T14:14:57,099 copying stko/optimizers/__init__.py -> build/lib/stko/optimizers 2021-10-22T14:14:57,101 copying stko/optimizers/gulp.py -> build/lib/stko/optimizers 2021-10-22T14:14:57,104 copying stko/optimizers/macromodel.py -> build/lib/stko/optimizers 2021-10-22T14:14:57,108 copying stko/optimizers/xtb.py -> build/lib/stko/optimizers 2021-10-22T14:14:57,112 copying stko/optimizers/collapser.py -> build/lib/stko/optimizers 2021-10-22T14:14:57,115 copying stko/optimizers/optimizers.py -> build/lib/stko/optimizers 2021-10-22T14:14:57,117 copying stko/optimizers/rdkit.py -> build/lib/stko/optimizers 2021-10-22T14:14:57,121 creating build/lib/stko/molecular/torsion 2021-10-22T14:14:57,122 copying stko/molecular/torsion/__init__.py -> build/lib/stko/molecular/torsion 2021-10-22T14:14:57,124 copying stko/molecular/torsion/torsion.py -> build/lib/stko/molecular/torsion 2021-10-22T14:14:57,126 copying stko/molecular/torsion/torsion_info.py -> build/lib/stko/molecular/torsion 2021-10-22T14:14:57,129 creating build/lib/stko/molecular/periodic 2021-10-22T14:14:57,130 copying stko/molecular/periodic/__init__.py -> build/lib/stko/molecular/periodic 2021-10-22T14:14:57,132 copying stko/molecular/periodic/unitcell.py -> build/lib/stko/molecular/periodic 2021-10-22T14:14:57,135 copying stko/molecular/periodic/utilities.py -> build/lib/stko/molecular/periodic 2021-10-22T14:14:57,138 creating build/lib/stko/molecular/networkx 2021-10-22T14:14:57,139 copying stko/molecular/networkx/__init__.py -> build/lib/stko/molecular/networkx 2021-10-22T14:14:57,141 copying stko/molecular/networkx/network.py -> build/lib/stko/molecular/networkx 2021-10-22T14:14:57,144 creating build/lib/stko/molecular/molecule_splitter 2021-10-22T14:14:57,145 copying stko/molecular/molecule_splitter/__init__.py -> build/lib/stko/molecular/molecule_splitter 2021-10-22T14:14:57,147 copying stko/molecular/molecule_splitter/molecule_splitter.py -> build/lib/stko/molecular/molecule_splitter 2021-10-22T14:14:57,150 creating build/lib/stko/molecular/conversion 2021-10-22T14:14:57,151 copying stko/molecular/conversion/__init__.py -> build/lib/stko/molecular/conversion 2021-10-22T14:14:57,153 copying stko/molecular/conversion/z_matrix.py -> build/lib/stko/molecular/conversion 2021-10-22T14:14:57,156 creating build/lib/stko/molecular/topology_extractor 2021-10-22T14:14:57,157 copying stko/molecular/topology_extractor/__init__.py -> build/lib/stko/molecular/topology_extractor 2021-10-22T14:14:57,160 copying stko/molecular/topology_extractor/topology_extractor.py -> build/lib/stko/molecular/topology_extractor 2021-10-22T14:14:57,162 copying stko/molecular/topology_extractor/topology_info.py -> build/lib/stko/molecular/topology_extractor 2021-10-22T14:14:57,165 creating build/lib/stko/calculators/extractors 2021-10-22T14:14:57,166 copying stko/calculators/extractors/extractor.py -> build/lib/stko/calculators/extractors 2021-10-22T14:14:57,168 copying stko/calculators/extractors/__init__.py -> build/lib/stko/calculators/extractors 2021-10-22T14:14:57,170 copying stko/calculators/extractors/orca_extractor.py -> build/lib/stko/calculators/extractors 2021-10-22T14:14:57,172 copying stko/calculators/extractors/xtb_extractor.py -> build/lib/stko/calculators/extractors 2021-10-22T14:14:57,175 creating build/lib/stko/calculators/results 2021-10-22T14:14:57,176 copying stko/calculators/results/__init__.py -> build/lib/stko/calculators/results 2021-10-22T14:14:57,178 copying stko/calculators/results/results.py -> build/lib/stko/calculators/results 2021-10-22T14:14:57,180 copying stko/calculators/results/orca_results.py -> build/lib/stko/calculators/results 2021-10-22T14:14:57,182 copying stko/calculators/results/energy_results.py -> build/lib/stko/calculators/results 2021-10-22T14:14:57,185 copying stko/calculators/results/torsion_results.py -> build/lib/stko/calculators/results 2021-10-22T14:14:57,187 copying stko/calculators/results/shape_results.py -> build/lib/stko/calculators/results 2021-10-22T14:14:57,189 copying stko/calculators/results/xtb_results.py -> build/lib/stko/calculators/results 2021-10-22T14:14:57,209 installing to build/bdist.linux-armv7l/wheel 2021-10-22T14:14:57,210 running install 2021-10-22T14:14:57,211 running install_lib 2021-10-22T14:14:57,217 creating build/bdist.linux-armv7l 2021-10-22T14:14:57,217 creating build/bdist.linux-armv7l/wheel 2021-10-22T14:14:57,219 creating build/bdist.linux-armv7l/wheel/tests 2021-10-22T14:14:57,220 copying build/lib/tests/__init__.py -> build/bdist.linux-armv7l/wheel/tests 2021-10-22T14:14:57,223 creating build/bdist.linux-armv7l/wheel/tests/molecular 2021-10-22T14:14:57,223 copying build/lib/tests/molecular/__init__.py -> build/bdist.linux-armv7l/wheel/tests/molecular 2021-10-22T14:14:57,226 creating build/bdist.linux-armv7l/wheel/tests/molecular/z_matrix 2021-10-22T14:14:57,227 copying build/lib/tests/molecular/z_matrix/test_zmatrix.py -> build/bdist.linux-armv7l/wheel/tests/molecular/z_matrix 2021-10-22T14:14:57,229 copying build/lib/tests/molecular/z_matrix/__init__.py -> build/bdist.linux-armv7l/wheel/tests/molecular/z_matrix 2021-10-22T14:14:57,231 copying build/lib/tests/molecular/z_matrix/conftest.py -> build/bdist.linux-armv7l/wheel/tests/molecular/z_matrix 2021-10-22T14:14:57,233 copying build/lib/tests/molecular/z_matrix/case_data.py -> build/bdist.linux-armv7l/wheel/tests/molecular/z_matrix 2021-10-22T14:14:57,235 copying build/lib/tests/conftest.py -> build/bdist.linux-armv7l/wheel/tests 2021-10-22T14:14:57,237 creating build/bdist.linux-armv7l/wheel/tests/optimizers 2021-10-22T14:14:57,238 copying build/lib/tests/optimizers/test_uff_assign_ff.py -> build/bdist.linux-armv7l/wheel/tests/optimizers 2021-10-22T14:14:57,241 copying build/lib/tests/optimizers/__init__.py -> build/bdist.linux-armv7l/wheel/tests/optimizers 2021-10-22T14:14:57,243 creating build/bdist.linux-armv7l/wheel/tests/optimizers/macromodel_optimizers 2021-10-22T14:14:57,244 copying build/lib/tests/optimizers/macromodel_optimizers/__init__.py -> build/bdist.linux-armv7l/wheel/tests/optimizers/macromodel_optimizers 2021-10-22T14:14:57,246 copying build/lib/tests/optimizers/macromodel_optimizers/test_macromodel.py -> build/bdist.linux-armv7l/wheel/tests/optimizers/macromodel_optimizers 2021-10-22T14:14:57,248 copying build/lib/tests/optimizers/test_optimizers.py -> build/bdist.linux-armv7l/wheel/tests/optimizers 2021-10-22T14:14:57,250 copying build/lib/tests/optimizers/conftest.py -> build/bdist.linux-armv7l/wheel/tests/optimizers 2021-10-22T14:14:57,252 copying build/lib/tests/optimizers/utilities.py -> build/bdist.linux-armv7l/wheel/tests/optimizers 2021-10-22T14:14:57,254 copying build/lib/tests/optimizers/test_gulp.py -> build/bdist.linux-armv7l/wheel/tests/optimizers 2021-10-22T14:14:57,257 copying build/lib/tests/optimizers/test_rdkit_optimizers.py -> build/bdist.linux-armv7l/wheel/tests/optimizers 2021-10-22T14:14:57,259 creating build/bdist.linux-armv7l/wheel/stko 2021-10-22T14:14:57,260 copying build/lib/stko/__init__.py -> build/bdist.linux-armv7l/wheel/stko 2021-10-22T14:14:57,263 creating build/bdist.linux-armv7l/wheel/stko/molecular 2021-10-22T14:14:57,265 creating build/bdist.linux-armv7l/wheel/stko/molecular/torsion 2021-10-22T14:14:57,266 copying build/lib/stko/molecular/torsion/__init__.py -> build/bdist.linux-armv7l/wheel/stko/molecular/torsion 2021-10-22T14:14:57,269 copying build/lib/stko/molecular/torsion/torsion.py -> build/bdist.linux-armv7l/wheel/stko/molecular/torsion 2021-10-22T14:14:57,271 copying build/lib/stko/molecular/torsion/torsion_info.py -> build/bdist.linux-armv7l/wheel/stko/molecular/torsion 2021-10-22T14:14:57,274 creating build/bdist.linux-armv7l/wheel/stko/molecular/periodic 2021-10-22T14:14:57,275 copying build/lib/stko/molecular/periodic/__init__.py -> build/bdist.linux-armv7l/wheel/stko/molecular/periodic 2021-10-22T14:14:57,277 copying build/lib/stko/molecular/periodic/unitcell.py -> build/bdist.linux-armv7l/wheel/stko/molecular/periodic 2021-10-22T14:14:57,279 copying build/lib/stko/molecular/periodic/utilities.py -> build/bdist.linux-armv7l/wheel/stko/molecular/periodic 2021-10-22T14:14:57,282 copying build/lib/stko/molecular/__init__.py -> build/bdist.linux-armv7l/wheel/stko/molecular 2021-10-22T14:14:57,285 creating build/bdist.linux-armv7l/wheel/stko/molecular/networkx 2021-10-22T14:14:57,286 copying build/lib/stko/molecular/networkx/__init__.py -> build/bdist.linux-armv7l/wheel/stko/molecular/networkx 2021-10-22T14:14:57,288 copying build/lib/stko/molecular/networkx/network.py -> build/bdist.linux-armv7l/wheel/stko/molecular/networkx 2021-10-22T14:14:57,291 creating build/bdist.linux-armv7l/wheel/stko/molecular/molecule_splitter 2021-10-22T14:14:57,292 copying build/lib/stko/molecular/molecule_splitter/__init__.py -> build/bdist.linux-armv7l/wheel/stko/molecular/molecule_splitter 2021-10-22T14:14:57,294 copying build/lib/stko/molecular/molecule_splitter/molecule_splitter.py -> build/bdist.linux-armv7l/wheel/stko/molecular/molecule_splitter 2021-10-22T14:14:57,297 creating build/bdist.linux-armv7l/wheel/stko/molecular/conversion 2021-10-22T14:14:57,298 copying build/lib/stko/molecular/conversion/__init__.py -> build/bdist.linux-armv7l/wheel/stko/molecular/conversion 2021-10-22T14:14:57,300 copying build/lib/stko/molecular/conversion/z_matrix.py -> build/bdist.linux-armv7l/wheel/stko/molecular/conversion 2021-10-22T14:14:57,303 creating build/bdist.linux-armv7l/wheel/stko/molecular/topology_extractor 2021-10-22T14:14:57,304 copying build/lib/stko/molecular/topology_extractor/__init__.py -> build/bdist.linux-armv7l/wheel/stko/molecular/topology_extractor 2021-10-22T14:14:57,306 copying build/lib/stko/molecular/topology_extractor/topology_extractor.py -> build/bdist.linux-armv7l/wheel/stko/molecular/topology_extractor 2021-10-22T14:14:57,308 copying build/lib/stko/molecular/topology_extractor/topology_info.py -> build/bdist.linux-armv7l/wheel/stko/molecular/topology_extractor 2021-10-22T14:14:57,311 creating build/bdist.linux-armv7l/wheel/stko/utilities 2021-10-22T14:14:57,312 copying build/lib/stko/utilities/__init__.py -> build/bdist.linux-armv7l/wheel/stko/utilities 2021-10-22T14:14:57,314 copying build/lib/stko/utilities/utilities.py -> build/bdist.linux-armv7l/wheel/stko/utilities 2021-10-22T14:14:57,318 creating build/bdist.linux-armv7l/wheel/stko/calculators 2021-10-22T14:14:57,319 copying build/lib/stko/calculators/rdkit_calculators.py -> build/bdist.linux-armv7l/wheel/stko/calculators 2021-10-22T14:14:57,321 copying build/lib/stko/calculators/__init__.py -> build/bdist.linux-armv7l/wheel/stko/calculators 2021-10-22T14:14:57,323 copying build/lib/stko/calculators/orca_calculators.py -> build/bdist.linux-armv7l/wheel/stko/calculators 2021-10-22T14:14:57,327 creating build/bdist.linux-armv7l/wheel/stko/calculators/extractors 2021-10-22T14:14:57,328 copying build/lib/stko/calculators/extractors/extractor.py -> build/bdist.linux-armv7l/wheel/stko/calculators/extractors 2021-10-22T14:14:57,330 copying build/lib/stko/calculators/extractors/__init__.py -> build/bdist.linux-armv7l/wheel/stko/calculators/extractors 2021-10-22T14:14:57,332 copying build/lib/stko/calculators/extractors/orca_extractor.py -> build/bdist.linux-armv7l/wheel/stko/calculators/extractors 2021-10-22T14:14:57,334 copying build/lib/stko/calculators/extractors/xtb_extractor.py -> build/bdist.linux-armv7l/wheel/stko/calculators/extractors 2021-10-22T14:14:57,337 copying build/lib/stko/calculators/torsion_calculators.py -> build/bdist.linux-armv7l/wheel/stko/calculators 2021-10-22T14:14:57,340 creating build/bdist.linux-armv7l/wheel/stko/calculators/results 2021-10-22T14:14:57,341 copying build/lib/stko/calculators/results/__init__.py -> build/bdist.linux-armv7l/wheel/stko/calculators/results 2021-10-22T14:14:57,343 copying build/lib/stko/calculators/results/results.py -> build/bdist.linux-armv7l/wheel/stko/calculators/results 2021-10-22T14:14:57,345 copying build/lib/stko/calculators/results/orca_results.py -> build/bdist.linux-armv7l/wheel/stko/calculators/results 2021-10-22T14:14:57,347 copying build/lib/stko/calculators/results/energy_results.py -> build/bdist.linux-armv7l/wheel/stko/calculators/results 2021-10-22T14:14:57,349 copying build/lib/stko/calculators/results/torsion_results.py -> build/bdist.linux-armv7l/wheel/stko/calculators/results 2021-10-22T14:14:57,351 copying build/lib/stko/calculators/results/shape_results.py -> build/bdist.linux-armv7l/wheel/stko/calculators/results 2021-10-22T14:14:57,353 copying build/lib/stko/calculators/results/xtb_results.py -> build/bdist.linux-armv7l/wheel/stko/calculators/results 2021-10-22T14:14:57,355 copying build/lib/stko/calculators/calculators.py -> build/bdist.linux-armv7l/wheel/stko/calculators 2021-10-22T14:14:57,357 copying build/lib/stko/calculators/shape_calculators.py -> build/bdist.linux-armv7l/wheel/stko/calculators 2021-10-22T14:14:57,359 copying build/lib/stko/calculators/xtb_calculators.py -> build/bdist.linux-armv7l/wheel/stko/calculators 2021-10-22T14:14:57,363 creating build/bdist.linux-armv7l/wheel/stko/optimizers 2021-10-22T14:14:57,363 copying build/lib/stko/optimizers/__init__.py -> build/bdist.linux-armv7l/wheel/stko/optimizers 2021-10-22T14:14:57,366 copying build/lib/stko/optimizers/gulp.py -> build/bdist.linux-armv7l/wheel/stko/optimizers 2021-10-22T14:14:57,369 copying build/lib/stko/optimizers/macromodel.py -> build/bdist.linux-armv7l/wheel/stko/optimizers 2021-10-22T14:14:57,373 copying build/lib/stko/optimizers/xtb.py -> build/bdist.linux-armv7l/wheel/stko/optimizers 2021-10-22T14:14:57,377 copying build/lib/stko/optimizers/collapser.py -> build/bdist.linux-armv7l/wheel/stko/optimizers 2021-10-22T14:14:57,380 copying build/lib/stko/optimizers/optimizers.py -> build/bdist.linux-armv7l/wheel/stko/optimizers 2021-10-22T14:14:57,383 copying build/lib/stko/optimizers/rdkit.py -> build/bdist.linux-armv7l/wheel/stko/optimizers 2021-10-22T14:14:57,385 running install_egg_info 2021-10-22T14:14:57,407 running egg_info 2021-10-22T14:14:57,407 writing stko.egg-info/PKG-INFO 2021-10-22T14:14:57,409 writing dependency_links to stko.egg-info/dependency_links.txt 2021-10-22T14:14:57,411 writing requirements to stko.egg-info/requires.txt 2021-10-22T14:14:57,412 writing top-level names to stko.egg-info/top_level.txt 2021-10-22T14:14:57,426 reading manifest file 'stko.egg-info/SOURCES.txt' 2021-10-22T14:14:57,429 adding license file 'LICENSE' 2021-10-22T14:14:57,434 writing manifest file 'stko.egg-info/SOURCES.txt' 2021-10-22T14:14:57,436 Copying stko.egg-info to build/bdist.linux-armv7l/wheel/stko-0.0.36-py3.7.egg-info 2021-10-22T14:14:57,446 running install_scripts 2021-10-22T14:14:57,517 adding license file "LICENSE" (matched pattern "LICEN[CS]E*") 2021-10-22T14:14:57,520 creating build/bdist.linux-armv7l/wheel/stko-0.0.36.dist-info/WHEEL 2021-10-22T14:14:57,523 creating '/tmp/pip-wheel-nwcws6b0/stko-0.0.36-py3-none-any.whl' and adding 'build/bdist.linux-armv7l/wheel' to it 2021-10-22T14:14:57,525 adding 'stko/__init__.py' 2021-10-22T14:14:57,527 adding 'stko/calculators/__init__.py' 2021-10-22T14:14:57,528 adding 'stko/calculators/calculators.py' 2021-10-22T14:14:57,530 adding 'stko/calculators/orca_calculators.py' 2021-10-22T14:14:57,531 adding 'stko/calculators/rdkit_calculators.py' 2021-10-22T14:14:57,533 adding 'stko/calculators/shape_calculators.py' 2021-10-22T14:14:57,534 adding 'stko/calculators/torsion_calculators.py' 2021-10-22T14:14:57,537 adding 'stko/calculators/xtb_calculators.py' 2021-10-22T14:14:57,539 adding 'stko/calculators/extractors/__init__.py' 2021-10-22T14:14:57,540 adding 'stko/calculators/extractors/extractor.py' 2021-10-22T14:14:57,541 adding 'stko/calculators/extractors/orca_extractor.py' 2021-10-22T14:14:57,543 adding 'stko/calculators/extractors/xtb_extractor.py' 2021-10-22T14:14:57,545 adding 'stko/calculators/results/__init__.py' 2021-10-22T14:14:57,546 adding 'stko/calculators/results/energy_results.py' 2021-10-22T14:14:57,547 adding 'stko/calculators/results/orca_results.py' 2021-10-22T14:14:57,548 adding 'stko/calculators/results/results.py' 2021-10-22T14:14:57,549 adding 'stko/calculators/results/shape_results.py' 2021-10-22T14:14:57,551 adding 'stko/calculators/results/torsion_results.py' 2021-10-22T14:14:57,552 adding 'stko/calculators/results/xtb_results.py' 2021-10-22T14:14:57,553 adding 'stko/molecular/__init__.py' 2021-10-22T14:14:57,555 adding 'stko/molecular/conversion/__init__.py' 2021-10-22T14:14:57,556 adding 'stko/molecular/conversion/z_matrix.py' 2021-10-22T14:14:57,558 adding 'stko/molecular/molecule_splitter/__init__.py' 2021-10-22T14:14:57,559 adding 'stko/molecular/molecule_splitter/molecule_splitter.py' 2021-10-22T14:14:57,561 adding 'stko/molecular/networkx/__init__.py' 2021-10-22T14:14:57,562 adding 'stko/molecular/networkx/network.py' 2021-10-22T14:14:57,564 adding 'stko/molecular/periodic/__init__.py' 2021-10-22T14:14:57,566 adding 'stko/molecular/periodic/unitcell.py' 2021-10-22T14:14:57,567 adding 'stko/molecular/periodic/utilities.py' 2021-10-22T14:14:57,569 adding 'stko/molecular/topology_extractor/__init__.py' 2021-10-22T14:14:57,570 adding 'stko/molecular/topology_extractor/topology_extractor.py' 2021-10-22T14:14:57,572 adding 'stko/molecular/topology_extractor/topology_info.py' 2021-10-22T14:14:57,573 adding 'stko/molecular/torsion/__init__.py' 2021-10-22T14:14:57,575 adding 'stko/molecular/torsion/torsion.py' 2021-10-22T14:14:57,576 adding 'stko/molecular/torsion/torsion_info.py' 2021-10-22T14:14:57,578 adding 'stko/optimizers/__init__.py' 2021-10-22T14:14:57,581 adding 'stko/optimizers/collapser.py' 2021-10-22T14:14:57,586 adding 'stko/optimizers/gulp.py' 2021-10-22T14:14:57,591 adding 'stko/optimizers/macromodel.py' 2021-10-22T14:14:57,593 adding 'stko/optimizers/optimizers.py' 2021-10-22T14:14:57,595 adding 'stko/optimizers/rdkit.py' 2021-10-22T14:14:57,599 adding 'stko/optimizers/xtb.py' 2021-10-22T14:14:57,601 adding 'stko/utilities/__init__.py' 2021-10-22T14:14:57,604 adding 'stko/utilities/utilities.py' 2021-10-22T14:14:57,608 adding 'tests/__init__.py' 2021-10-22T14:14:57,609 adding 'tests/conftest.py' 2021-10-22T14:14:57,610 adding 'tests/molecular/__init__.py' 2021-10-22T14:14:57,612 adding 'tests/molecular/z_matrix/__init__.py' 2021-10-22T14:14:57,613 adding 'tests/molecular/z_matrix/case_data.py' 2021-10-22T14:14:57,614 adding 'tests/molecular/z_matrix/conftest.py' 2021-10-22T14:14:57,615 adding 'tests/molecular/z_matrix/test_zmatrix.py' 2021-10-22T14:14:57,617 adding 'tests/optimizers/__init__.py' 2021-10-22T14:14:57,618 adding 'tests/optimizers/conftest.py' 2021-10-22T14:14:57,619 adding 'tests/optimizers/test_gulp.py' 2021-10-22T14:14:57,620 adding 'tests/optimizers/test_optimizers.py' 2021-10-22T14:14:57,621 adding 'tests/optimizers/test_rdkit_optimizers.py' 2021-10-22T14:14:57,623 adding 'tests/optimizers/test_uff_assign_ff.py' 2021-10-22T14:14:57,624 adding 'tests/optimizers/utilities.py' 2021-10-22T14:14:57,626 adding 'tests/optimizers/macromodel_optimizers/__init__.py' 2021-10-22T14:14:57,627 adding 'tests/optimizers/macromodel_optimizers/test_macromodel.py' 2021-10-22T14:14:57,628 adding 'stko-0.0.36.dist-info/LICENSE' 2021-10-22T14:14:57,629 adding 'stko-0.0.36.dist-info/METADATA' 2021-10-22T14:14:57,630 adding 'stko-0.0.36.dist-info/WHEEL' 2021-10-22T14:14:57,631 adding 'stko-0.0.36.dist-info/top_level.txt' 2021-10-22T14:14:57,632 adding 'stko-0.0.36.dist-info/RECORD' 2021-10-22T14:14:57,635 removing build/bdist.linux-armv7l/wheel 2021-10-22T14:14:57,738 Building wheel for stko (setup.py): finished with status 'done' 2021-10-22T14:14:57,741 Created wheel for stko: filename=stko-0.0.36-py3-none-any.whl size=84900 sha256=e803ed8c59f28396d67ffef15200aa5ccb4b3bd83eb3a26bb18cffd2e7885407 2021-10-22T14:14:57,742 Stored in directory: /tmp/pip-ephem-wheel-cache-lox1l8fv/wheels/b9/f4/68/c1c8d2c7df63e75a1bf097202cd4804194d05599ca6d6786d5 2021-10-22T14:14:57,752 Successfully built stko 2021-10-22T14:14:57,758 Removed build tracker: '/tmp/pip-req-tracker-1m7ucbpq'