2021-10-25T19:52:07,458 Created temporary directory: /tmp/pip-ephem-wheel-cache-yfriz4kp 2021-10-25T19:52:07,465 Created temporary directory: /tmp/pip-req-tracker-mbnqpkg8 2021-10-25T19:52:07,466 Initialized build tracking at /tmp/pip-req-tracker-mbnqpkg8 2021-10-25T19:52:07,466 Created build tracker: /tmp/pip-req-tracker-mbnqpkg8 2021-10-25T19:52:07,466 Entered build tracker: /tmp/pip-req-tracker-mbnqpkg8 2021-10-25T19:52:07,468 Created temporary directory: /tmp/pip-wheel-0x0paxtw 2021-10-25T19:52:07,524 Looking in indexes: https://pypi.org/simple, https://www.piwheels.org/simple 2021-10-25T19:52:07,527 2 location(s) to search for versions of abutils: 2021-10-25T19:52:07,527 * https://pypi.org/simple/abutils/ 2021-10-25T19:52:07,527 * https://www.piwheels.org/simple/abutils/ 2021-10-25T19:52:07,528 Fetching project page and analyzing links: https://pypi.org/simple/abutils/ 2021-10-25T19:52:07,530 Getting page https://pypi.org/simple/abutils/ 2021-10-25T19:52:07,534 Found index url https://pypi.org/simple 2021-10-25T19:52:07,885 Found link https://files.pythonhosted.org/packages/50/68/e90af4390a5bf4ae7f4d4c320618c21938407e2cbccb1d8eb9e2128129f7/abutils-0.0.1.tar.gz#sha256=37af83364fc31843d62d310521249cbe80cc023d15f5f75fc0d5ce6fcd91deb1 (from https://pypi.org/simple/abutils/), version: 0.0.1 2021-10-25T19:52:07,886 Found link https://files.pythonhosted.org/packages/2a/34/20450169e044c8a5b3f0789cb6792ac3f0d94ee7314aecda4332460d3996/abutils-0.0.2.tar.gz#sha256=43dd804dece09c9369089ed42273c307186637b08af34d02f75dfc89a10f6e5d (from https://pypi.org/simple/abutils/), version: 0.0.2 2021-10-25T19:52:07,887 Found link https://files.pythonhosted.org/packages/e7/0b/92eacaadffa6dbe5536af17cd2288991862e5ca8a5193bc3f5f0c511939b/abutils-0.0.3.tar.gz#sha256=f7405a7b2a9379009f47ba3e8e4bce520e60a017512e03dd5db3fe0a2b78e07b (from https://pypi.org/simple/abutils/), version: 0.0.3 2021-10-25T19:52:07,888 Found link https://files.pythonhosted.org/packages/66/9c/c88a230d9a7df70ed076345a5697bffbac79affa98de6bc7335cbe399508/abutils-0.0.4.tar.gz#sha256=fe6c72b1df17d4762e55b43c72483f2c280ff183a14ab0d2f0e7e565b3c0e1ec (from https://pypi.org/simple/abutils/), version: 0.0.4 2021-10-25T19:52:07,889 Found link https://files.pythonhosted.org/packages/36/3e/e6b030787fca71eedbaaa8be3b8b0169a655c7403622bc0c418918121b72/abutils-0.0.5.tar.gz#sha256=5568b23eaa7ec1f7afb425ab851252e0dff99d18d387b4537afbae3386b226ad (from https://pypi.org/simple/abutils/), version: 0.0.5 2021-10-25T19:52:07,890 Found link https://files.pythonhosted.org/packages/c2/4b/a1c076b09bf2ab1f5545d0f9fe05c7861166c49ea9846f2d72f6306e792c/abutils-0.0.6.tar.gz#sha256=68f0de6febcdad293e885b460fcf68d7c5d58da384fb1ec94c87094d339eb056 (from https://pypi.org/simple/abutils/), version: 0.0.6 2021-10-25T19:52:07,891 Found link https://files.pythonhosted.org/packages/ba/48/ccd3a0f5de7c0b2857f163b24120b027f9b2d88b5b8898646a6126d2ce6b/abutils-0.0.7.tar.gz#sha256=42e65c297d34f2ccedcf763201d0c279b328193ced7eb8aafe204ec44433506d (from https://pypi.org/simple/abutils/), version: 0.0.7 2021-10-25T19:52:07,891 Skipping link: No binaries permitted for abutils: https://files.pythonhosted.org/packages/8e/ba/0b774748bc954d98e3246982d1017d09459ecbc21a76628161aa49d4e3fc/abutils-0.1.0-py3-none-any.whl#sha256=4546e6994f84194f448c4af73e9ac961b6cee59d5825bce6b688a7eb31f173f8 (from https://pypi.org/simple/abutils/) 2021-10-25T19:52:07,892 Found link https://files.pythonhosted.org/packages/8d/4f/f8bde54f3acd7bf945ac9d612145ca8fc2a0eecf26aa439921941211a91a/abutils-0.1.0.tar.gz#sha256=7abbc171edc36db3e2d3c568ef2d90e491768a956064e318ea501c3d45140603 (from https://pypi.org/simple/abutils/), version: 0.1.0 2021-10-25T19:52:07,893 Skipping link: No binaries permitted for abutils: https://files.pythonhosted.org/packages/99/db/544d2861d9f00f1454ae247e50d074062929bdeb0c2d0e968f51e132320e/abutils-0.1.1-py3-none-any.whl#sha256=e848425dd30ebba12d526963aed48ce2705734d49626dcc0c01e60813ce6cf98 (from https://pypi.org/simple/abutils/) 2021-10-25T19:52:07,894 Found link https://files.pythonhosted.org/packages/2e/53/f9f6ef913b46b47233508bafc5c4869a46f3c66a0ec9e446bef0537c88f6/abutils-0.1.1.tar.gz#sha256=fcc015a0b645bb5afcd116809e76257044522fee74068e45aa0102123b5a765f (from https://pypi.org/simple/abutils/), version: 0.1.1 2021-10-25T19:52:07,895 Skipping link: No binaries permitted for abutils: https://files.pythonhosted.org/packages/72/6e/6af90e6c896511e60fa77eeb6742933760f8cc5ba8a8ffbea1bf00440dcf/abutils-0.2-py3-none-any.whl#sha256=ff38b64e1d607db600d5dd88d0a867273e041adde7d995e24c632ca7ee4c07bd (from https://pypi.org/simple/abutils/) 2021-10-25T19:52:07,895 Found link https://files.pythonhosted.org/packages/58/06/198c2161367eed257bbbc6295af2f6bd9148bccd26f67535bd07d1974dfb/abutils-0.2.tar.gz#sha256=009c7434bcb11200a82ae945f041896f3f6a6cd25653005e737051b1f7e4f8ec (from https://pypi.org/simple/abutils/), version: 0.2 2021-10-25T19:52:07,896 Skipping link: No binaries permitted for abutils: https://files.pythonhosted.org/packages/e9/6b/41bd824641aee954bdc00d6fcc3d7f411af32a68acdbb7330c59d7fab67f/abutils-0.2.1-py3-none-any.whl#sha256=53ea13e6f02b9605de8c9613420aaed78962fb944ecdfc100603204c264c7d40 (from https://pypi.org/simple/abutils/) 2021-10-25T19:52:07,897 Found link https://files.pythonhosted.org/packages/c3/51/083596ecb529073ccc5142ffe85766aef208bd4d6925da8f771f6f95e256/abutils-0.2.1.tar.gz#sha256=756af3fbc9a96ddcd2e6967a95f13de25b9141ec74573467aecbbeaa45d1a781 (from https://pypi.org/simple/abutils/), version: 0.2.1 2021-10-25T19:52:07,898 Skipping link: No binaries permitted for abutils: https://files.pythonhosted.org/packages/94/cf/ae1ab5392b0f34c874cc8388d4df2985a2fc02d63dedcad0c2f4ca4b92bd/abutils-0.2.2-py3-none-any.whl#sha256=c5fdeed840fe64d0f8ef6b8b41d34c9d30aaf82fe1313e5d2001037d4f2cdf4c (from https://pypi.org/simple/abutils/) 2021-10-25T19:52:07,899 Found link https://files.pythonhosted.org/packages/dc/f5/c8838ebb6fbaa6b3d01d01d2d56e2ad5352fbeebf5086542c5bcef34c06a/abutils-0.2.2.tar.gz#sha256=09354bf3cd91afd95168e7056c15ec6a2de6ce471d552c684cfca4aebb4ebebe (from https://pypi.org/simple/abutils/), version: 0.2.2 2021-10-25T19:52:07,899 Skipping link: No binaries permitted for abutils: https://files.pythonhosted.org/packages/6a/94/90937a56b32783d6d57a2d6ff5e47d10d1d384f3d084e304f7870297853d/abutils-0.2.3-py3-none-any.whl#sha256=6b5c561a177253264806f3f200ae9aaec814f0c8c0d4205621e783ed7a7e666d (from https://pypi.org/simple/abutils/) 2021-10-25T19:52:07,900 Found link https://files.pythonhosted.org/packages/1e/a6/95c66c7ea2857825eb0af0fcd4e53687b65e4842b010caea5276bd97cd22/abutils-0.2.3.tar.gz#sha256=31d6e64acf878e6c5ecdd5872db5092417b2a1c49a2354874173a18cd271a965 (from https://pypi.org/simple/abutils/), version: 0.2.3 2021-10-25T19:52:07,901 Skipping link: No binaries permitted for abutils: https://files.pythonhosted.org/packages/1b/b2/13e6e64fe25b4ef34bcd9fbd9785b8446dbca4cf4a7fbbafddbfba957aad/abutils-0.2.4-py3-none-any.whl#sha256=b7cc50211227f95b0544149ddb49e17cf733ece77b8531c94bcdebabef433b03 (from https://pypi.org/simple/abutils/) 2021-10-25T19:52:07,902 Found link https://files.pythonhosted.org/packages/cc/04/a14461968dc575254af0e23cb7b259bfd57baa683653d88fcb21af6d526d/abutils-0.2.4.tar.gz#sha256=fa83e160d7fb3098a5b4379d3bee9b1d346a9defb379d061cc21e3115875586a (from https://pypi.org/simple/abutils/), version: 0.2.4 2021-10-25T19:52:07,903 Skipping link: No binaries permitted for abutils: https://files.pythonhosted.org/packages/f8/0d/f3f7b8eb834c24ffe8bf065ce6ab6bf5a60953ea369b1714a5130c0f17fe/abutils-0.2.5-py3-none-any.whl#sha256=3c44090846ba08065707dc7df8793a14006eb2fc1afcf088cf46600ddaaf926d (from https://pypi.org/simple/abutils/) 2021-10-25T19:52:07,904 Found link https://files.pythonhosted.org/packages/3a/91/b7e6649e58b286eb6bfcc14fbe33cc120e3ff30fbacf681b4dca97a448bd/abutils-0.2.5.tar.gz#sha256=f58dddde5ffe4b3ddac076890f2f7e566834e956fbe54589cd97fe007e23e186 (from https://pypi.org/simple/abutils/), version: 0.2.5 2021-10-25T19:52:07,904 Fetching project page and analyzing links: https://www.piwheels.org/simple/abutils/ 2021-10-25T19:52:07,905 Getting page https://www.piwheels.org/simple/abutils/ 2021-10-25T19:52:07,908 Found index url https://www.piwheels.org/simple 2021-10-25T19:52:08,141 Skipping link: No binaries permitted for abutils: https://www.piwheels.org/simple/abutils/abutils-0.0.1-py3-none-any.whl#sha256=80befe258b5d18e6293ffa5f53b4c6fca19cd9c57418df3ad521a374f3827c35 (from https://www.piwheels.org/simple/abutils/) 2021-10-25T19:52:08,142 Skipping link: No binaries permitted for abutils: https://www.piwheels.org/simple/abutils/abutils-0.0.2-py3-none-any.whl#sha256=fb1485c1bdfebb4961c6b63db9ae9c45af6af544bf5a1d88830bff9601c333f7 (from https://www.piwheels.org/simple/abutils/) 2021-10-25T19:52:08,143 Skipping link: No binaries permitted for abutils: https://www.piwheels.org/simple/abutils/abutils-0.0.3-py3-none-any.whl#sha256=3f9161ddaf87fcf6397f20c643a10e6c64dcc028dd9d608e3ba95e9eb4b42301 (from https://www.piwheels.org/simple/abutils/) 2021-10-25T19:52:08,143 Skipping link: No binaries permitted for abutils: https://www.piwheels.org/simple/abutils/abutils-0.0.4-py3-none-any.whl#sha256=a857179e2e3aacd72f0100ab26ddd429e314d0484d9dea700b6e3df6e7b08bfc (from https://www.piwheels.org/simple/abutils/) 2021-10-25T19:52:08,144 Skipping link: No binaries permitted for abutils: https://www.piwheels.org/simple/abutils/abutils-0.0.5-py3-none-any.whl#sha256=82da39e304387e62441d40c8da3e8b8e4f88b62838f0cfa01c9ac53272fd9322 (from https://www.piwheels.org/simple/abutils/) 2021-10-25T19:52:08,145 Skipping link: No binaries permitted for abutils: https://www.piwheels.org/simple/abutils/abutils-0.0.6-py3-none-any.whl#sha256=fa097decefc770e42b78c47c6b74e544cb886b2913fdd2a9764d1649c1083edc (from https://www.piwheels.org/simple/abutils/) 2021-10-25T19:52:08,145 Skipping link: No binaries permitted for abutils: https://www.piwheels.org/simple/abutils/abutils-0.0.7-py3-none-any.whl#sha256=54b0191660cee12eae66a1c9a280779122ee367b18dc31f5386ed7d9695ba86d (from https://www.piwheels.org/simple/abutils/) 2021-10-25T19:52:08,146 Skipping link: No binaries permitted for abutils: https://www.piwheels.org/simple/abutils/abutils-0.1.0-py3-none-any.whl#sha256=4546e6994f84194f448c4af73e9ac961b6cee59d5825bce6b688a7eb31f173f8 (from https://www.piwheels.org/simple/abutils/) 2021-10-25T19:52:08,147 Skipping link: No binaries permitted for abutils: https://www.piwheels.org/simple/abutils/abutils-0.1.1-py3-none-any.whl#sha256=e848425dd30ebba12d526963aed48ce2705734d49626dcc0c01e60813ce6cf98 (from https://www.piwheels.org/simple/abutils/) 2021-10-25T19:52:08,147 Skipping link: No binaries permitted for abutils: https://www.piwheels.org/simple/abutils/abutils-0.2-py3-none-any.whl#sha256=ff38b64e1d607db600d5dd88d0a867273e041adde7d995e24c632ca7ee4c07bd (from https://www.piwheels.org/simple/abutils/) 2021-10-25T19:52:08,148 Skipping link: No binaries permitted for abutils: https://www.piwheels.org/simple/abutils/abutils-0.2.1-py3-none-any.whl#sha256=53ea13e6f02b9605de8c9613420aaed78962fb944ecdfc100603204c264c7d40 (from https://www.piwheels.org/simple/abutils/) 2021-10-25T19:52:08,148 Skipping link: No binaries permitted for abutils: https://www.piwheels.org/simple/abutils/abutils-0.2.2-py3-none-any.whl#sha256=c5fdeed840fe64d0f8ef6b8b41d34c9d30aaf82fe1313e5d2001037d4f2cdf4c (from https://www.piwheels.org/simple/abutils/) 2021-10-25T19:52:08,149 Skipping link: No binaries permitted for abutils: https://www.piwheels.org/simple/abutils/abutils-0.2.3-py3-none-any.whl#sha256=6b5c561a177253264806f3f200ae9aaec814f0c8c0d4205621e783ed7a7e666d (from https://www.piwheels.org/simple/abutils/) 2021-10-25T19:52:08,149 Skipping link: No binaries permitted for abutils: https://www.piwheels.org/simple/abutils/abutils-0.2.4-py3-none-any.whl#sha256=b7cc50211227f95b0544149ddb49e17cf733ece77b8531c94bcdebabef433b03 (from https://www.piwheels.org/simple/abutils/) 2021-10-25T19:52:08,185 Given no hashes to check 1 links for project 'abutils': discarding no candidates 2021-10-25T19:52:08,217 Collecting abutils==0.2.5 2021-10-25T19:52:08,221 Created temporary directory: /tmp/pip-unpack-sy8hodja 2021-10-25T19:52:09,341 Downloading abutils-0.2.5.tar.gz (18.3 MB) 2021-10-25T19:52:22,031 Added abutils==0.2.5 from https://files.pythonhosted.org/packages/3a/91/b7e6649e58b286eb6bfcc14fbe33cc120e3ff30fbacf681b4dca97a448bd/abutils-0.2.5.tar.gz#sha256=f58dddde5ffe4b3ddac076890f2f7e566834e956fbe54589cd97fe007e23e186 to build tracker '/tmp/pip-req-tracker-mbnqpkg8' 2021-10-25T19:52:22,038 Running setup.py (path:/tmp/pip-wheel-0x0paxtw/abutils_b747fc15c7fc423c971d2d1044472f49/setup.py) egg_info for package abutils 2021-10-25T19:52:22,040 Created temporary directory: /tmp/pip-pip-egg-info-1urngjtf 2021-10-25T19:52:22,041 Running command python setup.py egg_info 2021-10-25T19:52:25,683 running egg_info 2021-10-25T19:52:25,688 creating /tmp/pip-pip-egg-info-1urngjtf/abutils.egg-info 2021-10-25T19:52:25,691 writing requirements to /tmp/pip-pip-egg-info-1urngjtf/abutils.egg-info/requires.txt 2021-10-25T19:52:25,694 writing dependency_links to /tmp/pip-pip-egg-info-1urngjtf/abutils.egg-info/dependency_links.txt 2021-10-25T19:52:25,696 writing /tmp/pip-pip-egg-info-1urngjtf/abutils.egg-info/PKG-INFO 2021-10-25T19:52:25,701 writing top-level names to /tmp/pip-pip-egg-info-1urngjtf/abutils.egg-info/top_level.txt 2021-10-25T19:52:25,705 writing manifest file '/tmp/pip-pip-egg-info-1urngjtf/abutils.egg-info/SOURCES.txt' 2021-10-25T19:52:26,105 reading manifest file '/tmp/pip-pip-egg-info-1urngjtf/abutils.egg-info/SOURCES.txt' 2021-10-25T19:52:26,108 reading manifest template 'MANIFEST.in' 2021-10-25T19:52:26,135 writing manifest file '/tmp/pip-pip-egg-info-1urngjtf/abutils.egg-info/SOURCES.txt' 2021-10-25T19:52:26,370 Source in /tmp/pip-wheel-0x0paxtw/abutils_b747fc15c7fc423c971d2d1044472f49 has version 0.2.5, which satisfies requirement abutils==0.2.5 from https://files.pythonhosted.org/packages/3a/91/b7e6649e58b286eb6bfcc14fbe33cc120e3ff30fbacf681b4dca97a448bd/abutils-0.2.5.tar.gz#sha256=f58dddde5ffe4b3ddac076890f2f7e566834e956fbe54589cd97fe007e23e186 2021-10-25T19:52:26,372 Removed abutils==0.2.5 from https://files.pythonhosted.org/packages/3a/91/b7e6649e58b286eb6bfcc14fbe33cc120e3ff30fbacf681b4dca97a448bd/abutils-0.2.5.tar.gz#sha256=f58dddde5ffe4b3ddac076890f2f7e566834e956fbe54589cd97fe007e23e186 from build tracker '/tmp/pip-req-tracker-mbnqpkg8' 2021-10-25T19:52:26,380 Created temporary directory: /tmp/pip-unpack-epumsayt 2021-10-25T19:52:26,381 Building wheels for collected packages: abutils 2021-10-25T19:52:26,390 Created temporary directory: /tmp/pip-wheel-jbozx1mc 2021-10-25T19:52:26,391 Building wheel for abutils (setup.py): started 2021-10-25T19:52:26,392 Destination directory: /tmp/pip-wheel-jbozx1mc 2021-10-25T19:52:26,392 Running command /usr/bin/python3 -u -c 'import sys, setuptools, tokenize; sys.argv[0] = '"'"'/tmp/pip-wheel-0x0paxtw/abutils_b747fc15c7fc423c971d2d1044472f49/setup.py'"'"'; __file__='"'"'/tmp/pip-wheel-0x0paxtw/abutils_b747fc15c7fc423c971d2d1044472f49/setup.py'"'"';f=getattr(tokenize, '"'"'open'"'"', open)(__file__);code=f.read().replace('"'"'\r\n'"'"', '"'"'\n'"'"');f.close();exec(compile(code, __file__, '"'"'exec'"'"'))' bdist_wheel -d /tmp/pip-wheel-jbozx1mc 2021-10-25T19:52:29,909 running bdist_wheel 2021-10-25T19:52:29,921 running build 2021-10-25T19:52:29,922 running build_py 2021-10-25T19:52:30,297 creating build 2021-10-25T19:52:30,298 creating build/lib 2021-10-25T19:52:30,299 creating build/lib/abutils 2021-10-25T19:52:30,302 copying abutils/pl.py -> build/lib/abutils 2021-10-25T19:52:30,306 copying abutils/version.py -> build/lib/abutils 2021-10-25T19:52:30,309 copying abutils/tl.py -> build/lib/abutils 2021-10-25T19:52:30,313 copying abutils/io.py -> build/lib/abutils 2021-10-25T19:52:30,316 copying abutils/__init__.py -> build/lib/abutils 2021-10-25T19:52:30,319 running egg_info 2021-10-25T19:52:30,351 writing dependency_links to abutils.egg-info/dependency_links.txt 2021-10-25T19:52:30,354 writing abutils.egg-info/PKG-INFO 2021-10-25T19:52:30,357 writing top-level names to abutils.egg-info/top_level.txt 2021-10-25T19:52:30,360 writing requirements to abutils.egg-info/requires.txt 2021-10-25T19:52:30,369 reading manifest file 'abutils.egg-info/SOURCES.txt' 2021-10-25T19:52:30,376 reading manifest template 'MANIFEST.in' 2021-10-25T19:52:30,400 writing manifest file 'abutils.egg-info/SOURCES.txt' 2021-10-25T19:52:30,414 creating build/lib/abutils/bin 2021-10-25T19:52:30,416 copying abutils/bin/cdhit_darwin -> build/lib/abutils/bin 2021-10-25T19:52:30,436 copying abutils/bin/cdhit_linux -> build/lib/abutils/bin 2021-10-25T19:52:30,455 copying abutils/bin/mafft_darwin -> build/lib/abutils/bin 2021-10-25T19:52:30,472 copying abutils/bin/mafft_linux -> build/lib/abutils/bin 2021-10-25T19:52:30,487 copying abutils/bin/mmseqs_darwin -> build/lib/abutils/bin 2021-10-25T19:52:31,149 copying abutils/bin/mmseqs_linux -> build/lib/abutils/bin 2021-10-25T19:52:35,548 copying abutils/bin/muscle_darwin -> build/lib/abutils/bin 2021-10-25T19:52:35,595 copying abutils/bin/muscle_linux -> build/lib/abutils/bin 2021-10-25T19:52:35,638 copying abutils/bin/vsearch_darwin -> build/lib/abutils/bin 2021-10-25T19:52:35,693 copying abutils/bin/vsearch_linux -> build/lib/abutils/bin 2021-10-25T19:52:35,893 creating build/lib/abutils/core 2021-10-25T19:52:35,896 copying abutils/core/__init__.py -> build/lib/abutils/core 2021-10-25T19:52:35,903 copying abutils/core/lineage.py -> build/lib/abutils/core 2021-10-25T19:52:35,914 copying abutils/core/pair.py -> build/lib/abutils/core 2021-10-25T19:52:35,924 copying abutils/core/sequence.py -> build/lib/abutils/core 2021-10-25T19:52:35,932 creating build/lib/abutils/plots 2021-10-25T19:52:35,935 copying abutils/plots/__init__.py -> build/lib/abutils/plots 2021-10-25T19:52:35,942 copying abutils/plots/base.py -> build/lib/abutils/plots 2021-10-25T19:52:35,949 copying abutils/plots/lineage.py -> build/lib/abutils/plots 2021-10-25T19:52:35,958 copying abutils/plots/summary.py -> build/lib/abutils/plots 2021-10-25T19:52:35,965 creating build/lib/abutils/tenx 2021-10-25T19:52:35,968 copying abutils/tenx/__init__.py -> build/lib/abutils/tenx 2021-10-25T19:52:35,975 copying abutils/tenx/batch_cellranger.py -> build/lib/abutils/tenx 2021-10-25T19:52:35,985 copying abutils/tenx/features.py -> build/lib/abutils/tenx 2021-10-25T19:52:35,994 copying abutils/tenx/io.py -> build/lib/abutils/tenx 2021-10-25T19:52:36,002 copying abutils/tenx/pl.py -> build/lib/abutils/tenx 2021-10-25T19:52:36,011 copying abutils/tenx/tl.py -> build/lib/abutils/tenx 2021-10-25T19:52:36,017 creating build/lib/abutils/utils 2021-10-25T19:52:36,020 copying abutils/utils/__init__.py -> build/lib/abutils/utils 2021-10-25T19:52:36,027 copying abutils/utils/alignment.py -> build/lib/abutils/utils 2021-10-25T19:52:36,039 copying abutils/utils/cluster.py -> build/lib/abutils/utils 2021-10-25T19:52:36,047 copying abutils/utils/codons.py -> build/lib/abutils/utils 2021-10-25T19:52:36,053 copying abutils/utils/color.py -> build/lib/abutils/utils 2021-10-25T19:52:36,059 copying abutils/utils/convert.py -> build/lib/abutils/utils 2021-10-25T19:52:36,065 copying abutils/utils/database.py -> build/lib/abutils/utils 2021-10-25T19:52:36,073 copying abutils/utils/decorators.py -> build/lib/abutils/utils 2021-10-25T19:52:36,079 copying abutils/utils/germlines.py -> build/lib/abutils/utils 2021-10-25T19:52:36,086 copying abutils/utils/jobs.py -> build/lib/abutils/utils 2021-10-25T19:52:36,092 copying abutils/utils/log.py -> build/lib/abutils/utils 2021-10-25T19:52:36,098 copying abutils/utils/mongodb.py -> build/lib/abutils/utils 2021-10-25T19:52:36,105 copying abutils/utils/phylogeny.py -> build/lib/abutils/utils 2021-10-25T19:52:36,114 copying abutils/utils/pipeline.py -> build/lib/abutils/utils 2021-10-25T19:52:36,121 copying abutils/utils/progbar.py -> build/lib/abutils/utils 2021-10-25T19:52:36,127 copying abutils/utils/s3.py -> build/lib/abutils/utils 2021-10-25T19:52:36,134 copying abutils/utils/seqio.py -> build/lib/abutils/utils 2021-10-25T19:52:36,141 copying abutils/utils/ssh_tunnel.py -> build/lib/abutils/utils 2021-10-25T19:52:36,146 copying abutils/utils/utilities.py -> build/lib/abutils/utils 2021-10-25T19:52:36,151 creating build/lib/abutils/utils/matrices 2021-10-25T19:52:36,153 copying abutils/utils/matrices/blosum62 -> build/lib/abutils/utils/matrices 2021-10-25T19:52:36,159 copying abutils/utils/matrices/match1mismatch0 -> build/lib/abutils/utils/matrices 2021-10-25T19:52:36,166 copying abutils/utils/matrices/match3mismatch2 -> build/lib/abutils/utils/matrices 2021-10-25T19:52:36,174 running build_scripts 2021-10-25T19:52:36,176 creating build/scripts-3.5 2021-10-25T19:52:36,179 copying and adjusting bin/batch_cellranger -> build/scripts-3.5 2021-10-25T19:52:36,182 changing mode of build/scripts-3.5/batch_cellranger from 644 to 755 2021-10-25T19:52:36,186 installing to build/bdist.linux-armv7l/wheel 2021-10-25T19:52:36,187 running install 2021-10-25T19:52:36,188 running install_lib 2021-10-25T19:52:36,197 creating build/bdist.linux-armv7l 2021-10-25T19:52:36,198 creating build/bdist.linux-armv7l/wheel 2021-10-25T19:52:36,203 creating build/bdist.linux-armv7l/wheel/abutils 2021-10-25T19:52:36,207 creating build/bdist.linux-armv7l/wheel/abutils/tenx 2021-10-25T19:52:36,209 copying build/lib/abutils/tenx/batch_cellranger.py -> build/bdist.linux-armv7l/wheel/abutils/tenx 2021-10-25T19:52:36,217 copying build/lib/abutils/tenx/pl.py -> build/bdist.linux-armv7l/wheel/abutils/tenx 2021-10-25T19:52:36,224 copying build/lib/abutils/tenx/tl.py -> build/bdist.linux-armv7l/wheel/abutils/tenx 2021-10-25T19:52:36,229 copying build/lib/abutils/tenx/io.py -> build/bdist.linux-armv7l/wheel/abutils/tenx 2021-10-25T19:52:36,236 copying build/lib/abutils/tenx/__init__.py -> build/bdist.linux-armv7l/wheel/abutils/tenx 2021-10-25T19:52:36,241 copying build/lib/abutils/tenx/features.py -> build/bdist.linux-armv7l/wheel/abutils/tenx 2021-10-25T19:52:36,246 copying build/lib/abutils/pl.py -> build/bdist.linux-armv7l/wheel/abutils 2021-10-25T19:52:36,251 creating build/bdist.linux-armv7l/wheel/abutils/core 2021-10-25T19:52:36,253 copying build/lib/abutils/core/pair.py -> build/bdist.linux-armv7l/wheel/abutils/core 2021-10-25T19:52:36,260 copying build/lib/abutils/core/lineage.py -> build/bdist.linux-armv7l/wheel/abutils/core 2021-10-25T19:52:36,270 copying build/lib/abutils/core/sequence.py -> build/bdist.linux-armv7l/wheel/abutils/core 2021-10-25T19:52:36,278 copying build/lib/abutils/core/__init__.py -> build/bdist.linux-armv7l/wheel/abutils/core 2021-10-25T19:52:36,282 copying build/lib/abutils/version.py -> build/bdist.linux-armv7l/wheel/abutils 2021-10-25T19:52:36,286 copying build/lib/abutils/tl.py -> build/bdist.linux-armv7l/wheel/abutils 2021-10-25T19:52:36,291 creating build/bdist.linux-armv7l/wheel/abutils/utils 2021-10-25T19:52:36,293 copying build/lib/abutils/utils/phylogeny.py -> build/bdist.linux-armv7l/wheel/abutils/utils 2021-10-25T19:52:36,300 copying build/lib/abutils/utils/ssh_tunnel.py -> build/bdist.linux-armv7l/wheel/abutils/utils 2021-10-25T19:52:36,307 copying build/lib/abutils/utils/progbar.py -> build/bdist.linux-armv7l/wheel/abutils/utils 2021-10-25T19:52:36,313 copying build/lib/abutils/utils/decorators.py -> build/bdist.linux-armv7l/wheel/abutils/utils 2021-10-25T19:52:36,318 copying build/lib/abutils/utils/database.py -> build/bdist.linux-armv7l/wheel/abutils/utils 2021-10-25T19:52:36,324 copying build/lib/abutils/utils/pipeline.py -> build/bdist.linux-armv7l/wheel/abutils/utils 2021-10-25T19:52:36,329 copying build/lib/abutils/utils/cluster.py -> build/bdist.linux-armv7l/wheel/abutils/utils 2021-10-25T19:52:36,335 copying build/lib/abutils/utils/mongodb.py -> build/bdist.linux-armv7l/wheel/abutils/utils 2021-10-25T19:52:36,341 copying build/lib/abutils/utils/codons.py -> build/bdist.linux-armv7l/wheel/abutils/utils 2021-10-25T19:52:36,346 copying build/lib/abutils/utils/seqio.py -> build/bdist.linux-armv7l/wheel/abutils/utils 2021-10-25T19:52:36,353 copying build/lib/abutils/utils/s3.py -> build/bdist.linux-armv7l/wheel/abutils/utils 2021-10-25T19:52:36,359 copying build/lib/abutils/utils/alignment.py -> build/bdist.linux-armv7l/wheel/abutils/utils 2021-10-25T19:52:36,368 copying build/lib/abutils/utils/convert.py -> build/bdist.linux-armv7l/wheel/abutils/utils 2021-10-25T19:52:36,373 creating build/bdist.linux-armv7l/wheel/abutils/utils/matrices 2021-10-25T19:52:36,375 copying build/lib/abutils/utils/matrices/match1mismatch0 -> build/bdist.linux-armv7l/wheel/abutils/utils/matrices 2021-10-25T19:52:36,380 copying build/lib/abutils/utils/matrices/blosum62 -> build/bdist.linux-armv7l/wheel/abutils/utils/matrices 2021-10-25T19:52:36,385 copying build/lib/abutils/utils/matrices/match3mismatch2 -> build/bdist.linux-armv7l/wheel/abutils/utils/matrices 2021-10-25T19:52:36,390 copying build/lib/abutils/utils/__init__.py -> build/bdist.linux-armv7l/wheel/abutils/utils 2021-10-25T19:52:36,395 copying build/lib/abutils/utils/germlines.py -> build/bdist.linux-armv7l/wheel/abutils/utils 2021-10-25T19:52:36,402 copying build/lib/abutils/utils/color.py -> build/bdist.linux-armv7l/wheel/abutils/utils 2021-10-25T19:52:36,407 copying build/lib/abutils/utils/log.py -> build/bdist.linux-armv7l/wheel/abutils/utils 2021-10-25T19:52:36,411 copying build/lib/abutils/utils/jobs.py -> build/bdist.linux-armv7l/wheel/abutils/utils 2021-10-25T19:52:36,416 copying build/lib/abutils/utils/utilities.py -> build/bdist.linux-armv7l/wheel/abutils/utils 2021-10-25T19:52:36,420 copying build/lib/abutils/io.py -> build/bdist.linux-armv7l/wheel/abutils 2021-10-25T19:52:36,426 creating build/bdist.linux-armv7l/wheel/abutils/plots 2021-10-25T19:52:36,428 copying build/lib/abutils/plots/lineage.py -> build/bdist.linux-armv7l/wheel/abutils/plots 2021-10-25T19:52:36,436 copying build/lib/abutils/plots/summary.py -> build/bdist.linux-armv7l/wheel/abutils/plots 2021-10-25T19:52:36,442 copying build/lib/abutils/plots/base.py -> build/bdist.linux-armv7l/wheel/abutils/plots 2021-10-25T19:52:36,448 copying build/lib/abutils/plots/__init__.py -> build/bdist.linux-armv7l/wheel/abutils/plots 2021-10-25T19:52:36,453 copying build/lib/abutils/__init__.py -> build/bdist.linux-armv7l/wheel/abutils 2021-10-25T19:52:36,460 creating build/bdist.linux-armv7l/wheel/abutils/bin 2021-10-25T19:52:36,462 copying build/lib/abutils/bin/mmseqs_darwin -> build/bdist.linux-armv7l/wheel/abutils/bin 2021-10-25T19:52:37,117 copying build/lib/abutils/bin/vsearch_darwin -> build/bdist.linux-armv7l/wheel/abutils/bin 2021-10-25T19:52:37,171 copying build/lib/abutils/bin/cdhit_linux -> build/bdist.linux-armv7l/wheel/abutils/bin 2021-10-25T19:52:37,190 copying build/lib/abutils/bin/muscle_darwin -> build/bdist.linux-armv7l/wheel/abutils/bin 2021-10-25T19:52:37,236 copying build/lib/abutils/bin/mafft_linux -> build/bdist.linux-armv7l/wheel/abutils/bin 2021-10-25T19:52:37,251 copying build/lib/abutils/bin/vsearch_linux -> build/bdist.linux-armv7l/wheel/abutils/bin 2021-10-25T19:52:37,443 copying build/lib/abutils/bin/cdhit_darwin -> build/bdist.linux-armv7l/wheel/abutils/bin 2021-10-25T19:52:37,464 copying build/lib/abutils/bin/muscle_linux -> build/bdist.linux-armv7l/wheel/abutils/bin 2021-10-25T19:52:37,501 copying build/lib/abutils/bin/mmseqs_linux -> build/bdist.linux-armv7l/wheel/abutils/bin 2021-10-25T19:52:41,786 copying build/lib/abutils/bin/mafft_darwin -> build/bdist.linux-armv7l/wheel/abutils/bin 2021-10-25T19:52:41,799 running install_egg_info 2021-10-25T19:52:41,809 Copying abutils.egg-info to build/bdist.linux-armv7l/wheel/abutils-0.2.5-py3.5.egg-info 2021-10-25T19:52:41,838 running install_scripts 2021-10-25T19:52:41,885 creating build/bdist.linux-armv7l/wheel/abutils-0.2.5.data 2021-10-25T19:52:41,886 creating build/bdist.linux-armv7l/wheel/abutils-0.2.5.data/scripts 2021-10-25T19:52:41,888 copying build/scripts-3.5/batch_cellranger -> build/bdist.linux-armv7l/wheel/abutils-0.2.5.data/scripts 2021-10-25T19:52:41,892 changing mode of build/bdist.linux-armv7l/wheel/abutils-0.2.5.data/scripts/batch_cellranger to 755 2021-10-25T19:52:41,975 creating build/bdist.linux-armv7l/wheel/abutils-0.2.5.dist-info/WHEEL 2021-10-25T19:52:59,597 Building wheel for abutils (setup.py): finished with status 'done' 2021-10-25T19:52:59,906 Created wheel for abutils: filename=abutils-0.2.5-py3-none-any.whl size=18410947 sha256=132b4af2881b535924c6b615f7e0dca8d858a65db5ce7f600425f0afa220e942 2021-10-25T19:52:59,907 Stored in directory: /tmp/pip-ephem-wheel-cache-yfriz4kp/wheels/71/49/ce/56116be71fa8ec5def5b4053ce5dd10bebcd1e805b5a08f4df 2021-10-25T19:52:59,937 Successfully built abutils 2021-10-25T19:53:03,196 Removed build tracker: '/tmp/pip-req-tracker-mbnqpkg8'