2021-10-30T07:59:06,430 Created temporary directory: /tmp/pip-ephem-wheel-cache-73e9gd4o 2021-10-30T07:59:06,437 Created temporary directory: /tmp/pip-req-tracker-fn9gzh4r 2021-10-30T07:59:06,438 Initialized build tracking at /tmp/pip-req-tracker-fn9gzh4r 2021-10-30T07:59:06,438 Created build tracker: /tmp/pip-req-tracker-fn9gzh4r 2021-10-30T07:59:06,438 Entered build tracker: /tmp/pip-req-tracker-fn9gzh4r 2021-10-30T07:59:06,440 Created temporary directory: /tmp/pip-wheel-ht84u89w 2021-10-30T07:59:06,506 Looking in indexes: https://pypi.org/simple, https://www.piwheels.org/simple 2021-10-30T07:59:06,509 2 location(s) to search for versions of biobb-adapters: 2021-10-30T07:59:06,509 * https://pypi.org/simple/biobb-adapters/ 2021-10-30T07:59:06,509 * https://www.piwheels.org/simple/biobb-adapters/ 2021-10-30T07:59:06,510 Fetching project page and analyzing links: https://pypi.org/simple/biobb-adapters/ 2021-10-30T07:59:06,512 Getting page https://pypi.org/simple/biobb-adapters/ 2021-10-30T07:59:06,517 Found index url https://pypi.org/simple 2021-10-30T07:59:06,859 Skipping link: No binaries permitted for biobb-adapters: https://files.pythonhosted.org/packages/6e/48/fa9f1781406343cda29442d0ad67f8fa113f3661c8a62ae599a225e559d6/biobb_adapters-0.0.1-py3-none-any.whl#sha256=cf710e8eb6bc1256248c69baea53ce2727fc707766e31bcf25fc9b9cfe66745a (from https://pypi.org/simple/biobb-adapters/) (requires-python:>=3) 2021-10-30T07:59:06,861 Found link https://files.pythonhosted.org/packages/ea/47/5763ae5620f550174e112f8231676887f996c7c7bdacb854a46860abf447/biobb_adapters-0.0.1.tar.gz#sha256=545d7bcf2f0803ff36398ae916f00bc3269fd797ecaac95b0a8de07563b3e749 (from https://pypi.org/simple/biobb-adapters/) (requires-python:>=3), version: 0.0.1 2021-10-30T07:59:06,862 Skipping link: No binaries permitted for biobb-adapters: https://files.pythonhosted.org/packages/0f/61/dc32b2bcfb9b1d1c8d79dc96d32671a901cd83acd1b6184772cdef43c920/biobb_adapters-0.1.2-py3-none-any.whl#sha256=0acb06de199e0ac06376a0ffe5e2071445ee7a36fce431a17edc27fdf218492d (from https://pypi.org/simple/biobb-adapters/) (requires-python:>=3) 2021-10-30T07:59:06,864 Found link https://files.pythonhosted.org/packages/3e/05/6809d3f7ea93db6f0bceb198539299a5e33e6315b666d04e6e57568e7f11/biobb_adapters-0.1.2.tar.gz#sha256=bd7717b1f8a51d2fa7197e1291cc73be9ee6f5acd4352c82635a517d16df219f (from https://pypi.org/simple/biobb-adapters/) (requires-python:>=3), version: 0.1.2 2021-10-30T07:59:06,865 Skipping link: No binaries permitted for biobb-adapters: https://files.pythonhosted.org/packages/d8/34/06237256a2caa148311d8093a3f71206668f61b7cd20799b8ecf6563cbce/biobb_adapters-0.1.3-py3-none-any.whl#sha256=3d9b62abc78a28b54c050954fd6ee0e3a1fed164a3d3b8d6eadadd0b25b775d2 (from https://pypi.org/simple/biobb-adapters/) (requires-python:>=3) 2021-10-30T07:59:06,866 Found link https://files.pythonhosted.org/packages/cf/8d/f1da413a4007f55934dff4375e5d87d0b0f8fb7d84c1062157948f4392c9/biobb_adapters-0.1.3.tar.gz#sha256=a3d7a091a9ccb883339a5095a1099a0b5e085833e85c7d4c100ffcbf82155777 (from https://pypi.org/simple/biobb-adapters/) (requires-python:>=3), version: 0.1.3 2021-10-30T07:59:06,867 Skipping link: No binaries permitted for biobb-adapters: https://files.pythonhosted.org/packages/10/82/a1f366057fb6d101117ace12799cda70ce00ea9c76277d2c8e08e2fafc14/biobb_adapters-0.1.4-py3-none-any.whl#sha256=f26f2aaffd33d22a606ba569276dcfd04bce56a2e8ab8e382acc2646b01f3a85 (from https://pypi.org/simple/biobb-adapters/) (requires-python:>=3) 2021-10-30T07:59:06,869 Found link https://files.pythonhosted.org/packages/fc/71/7d6174c4c56a7b38322a5a99c1d72c4f6b1115106508a887fbbda63e30d4/biobb_adapters-0.1.4.tar.gz#sha256=7b19e009f69f9f9f3a292ba235dcee790f7e0da435365d4f8f19a63910b7c6d4 (from https://pypi.org/simple/biobb-adapters/) (requires-python:>=3), version: 0.1.4 2021-10-30T07:59:06,870 Skipping link: No binaries permitted for biobb-adapters: https://files.pythonhosted.org/packages/af/fd/491ede12a15215794041755b568998a5ff3e8c2e1e8df7b5cec044dcdc6e/biobb_adapters-3.6.0-py3-none-any.whl#sha256=deec3d977dc1d2088be8a28197d1bd98650e1baba87d45b5d2ef7fed41fa671c (from https://pypi.org/simple/biobb-adapters/) (requires-python:>=3) 2021-10-30T07:59:06,871 Found link https://files.pythonhosted.org/packages/d4/8e/89622b96a2f6255ba0313fb1eaf264343e3c7c1c2e2bcbb0544b990d32bc/biobb_adapters-3.6.0.tar.gz#sha256=912dfc9f49bf587955a8ac0f90907ccb8c2384a4922ef561cb4b2521771d2277 (from https://pypi.org/simple/biobb-adapters/) (requires-python:>=3), version: 3.6.0 2021-10-30T07:59:06,873 Skipping link: No binaries permitted for biobb-adapters: https://files.pythonhosted.org/packages/76/dc/444595a3497f5b5e9220cfb8c683abb044a799aa63249e69fa1c8c46c51b/biobb_adapters-3.6.1-py3-none-any.whl#sha256=1a05b0db6800ac0b68e9219d7a32d56e933c0dbc76ad2d31fbcf25650764ad6c (from https://pypi.org/simple/biobb-adapters/) (requires-python:>=3) 2021-10-30T07:59:06,874 Found link https://files.pythonhosted.org/packages/1c/c1/1cb78ece834741799903f6eac3dd0035297ff1c7cbb75f391ec9d5edd95b/biobb_adapters-3.6.1.tar.gz#sha256=b27198ef9d9b4d321bd91c280d40e0fa8cf1b8660e6eb7e9fa780a7ce1409892 (from https://pypi.org/simple/biobb-adapters/) (requires-python:>=3), version: 3.6.1 2021-10-30T07:59:06,875 Skipping link: No binaries permitted for biobb-adapters: https://files.pythonhosted.org/packages/ba/21/064ebc456bb946b0e94829c80dfd6adc302bc65cf2d4eb774a5a1da47d90/biobb_adapters-3.7.0-py3-none-any.whl#sha256=127ff1ebd94fa6a00aa2ce2637c9fc3a233a312bda784f3f08a19e7c1a88c1ff (from https://pypi.org/simple/biobb-adapters/) (requires-python:>=3) 2021-10-30T07:59:06,877 Found link https://files.pythonhosted.org/packages/8d/bd/df127a6c4c110ffd8e6cf6a5a186fb0ddd180f7fd15f3283f5588834a605/biobb_adapters-3.7.0.tar.gz#sha256=5f7dd222332b76f4926dd47717690045bd67599fc94f365e1a1c099825400d88 (from https://pypi.org/simple/biobb-adapters/) (requires-python:>=3), version: 3.7.0 2021-10-30T07:59:06,877 Fetching project page and analyzing links: https://www.piwheels.org/simple/biobb-adapters/ 2021-10-30T07:59:06,878 Getting page https://www.piwheels.org/simple/biobb-adapters/ 2021-10-30T07:59:06,881 Found index url https://www.piwheels.org/simple 2021-10-30T07:59:07,121 Skipping link: No binaries permitted for biobb-adapters: https://www.piwheels.org/simple/biobb-adapters/biobb_adapters-0.0.1-py3-none-any.whl#sha256=cf710e8eb6bc1256248c69baea53ce2727fc707766e31bcf25fc9b9cfe66745a (from https://www.piwheels.org/simple/biobb-adapters/) (requires-python:>=3) 2021-10-30T07:59:07,122 Skipping link: No binaries permitted for biobb-adapters: https://www.piwheels.org/simple/biobb-adapters/biobb_adapters-0.1.2-py3-none-any.whl#sha256=0acb06de199e0ac06376a0ffe5e2071445ee7a36fce431a17edc27fdf218492d (from https://www.piwheels.org/simple/biobb-adapters/) (requires-python:>=3) 2021-10-30T07:59:07,122 Skipping link: No binaries permitted for biobb-adapters: https://www.piwheels.org/simple/biobb-adapters/biobb_adapters-0.1.3-py3-none-any.whl#sha256=3d9b62abc78a28b54c050954fd6ee0e3a1fed164a3d3b8d6eadadd0b25b775d2 (from https://www.piwheels.org/simple/biobb-adapters/) (requires-python:>=3) 2021-10-30T07:59:07,123 Skipping link: No binaries permitted for biobb-adapters: https://www.piwheels.org/simple/biobb-adapters/biobb_adapters-0.1.4-py3-none-any.whl#sha256=f26f2aaffd33d22a606ba569276dcfd04bce56a2e8ab8e382acc2646b01f3a85 (from https://www.piwheels.org/simple/biobb-adapters/) (requires-python:>=3) 2021-10-30T07:59:07,124 Skipping link: No binaries permitted for biobb-adapters: https://www.piwheels.org/simple/biobb-adapters/biobb_adapters-3.6.0-py3-none-any.whl#sha256=deec3d977dc1d2088be8a28197d1bd98650e1baba87d45b5d2ef7fed41fa671c (from https://www.piwheels.org/simple/biobb-adapters/) (requires-python:>=3) 2021-10-30T07:59:07,124 Skipping link: No binaries permitted for biobb-adapters: https://www.piwheels.org/simple/biobb-adapters/biobb_adapters-3.6.1-py3-none-any.whl#sha256=8260317060e532fea600980ac833bd79b07ac5df283349b573221a8a7c732506 (from https://www.piwheels.org/simple/biobb-adapters/) (requires-python:>=3) 2021-10-30T07:59:07,156 Given no hashes to check 1 links for project 'biobb-adapters': discarding no candidates 2021-10-30T07:59:07,188 Collecting biobb-adapters==3.7.0 2021-10-30T07:59:07,191 Created temporary directory: /tmp/pip-unpack-9em3m_iy 2021-10-30T07:59:08,570 Downloading biobb_adapters-3.7.0.tar.gz (39.4 MB) 2021-10-30T07:59:35,185 Added biobb-adapters==3.7.0 from https://files.pythonhosted.org/packages/8d/bd/df127a6c4c110ffd8e6cf6a5a186fb0ddd180f7fd15f3283f5588834a605/biobb_adapters-3.7.0.tar.gz#sha256=5f7dd222332b76f4926dd47717690045bd67599fc94f365e1a1c099825400d88 to build tracker '/tmp/pip-req-tracker-fn9gzh4r' 2021-10-30T07:59:35,189 Running setup.py (path:/tmp/pip-wheel-ht84u89w/biobb-adapters_b5e19f0377be40d3980efc7154621b37/setup.py) egg_info for package biobb-adapters 2021-10-30T07:59:35,191 Created temporary directory: /tmp/pip-pip-egg-info-rr9xte55 2021-10-30T07:59:35,193 Running command python setup.py egg_info 2021-10-30T07:59:37,196 running egg_info 2021-10-30T07:59:37,202 creating /tmp/pip-pip-egg-info-rr9xte55/biobb_adapters.egg-info 2021-10-30T07:59:37,206 writing /tmp/pip-pip-egg-info-rr9xte55/biobb_adapters.egg-info/PKG-INFO 2021-10-30T07:59:37,212 writing requirements to /tmp/pip-pip-egg-info-rr9xte55/biobb_adapters.egg-info/requires.txt 2021-10-30T07:59:37,215 writing top-level names to /tmp/pip-pip-egg-info-rr9xte55/biobb_adapters.egg-info/top_level.txt 2021-10-30T07:59:37,217 writing dependency_links to /tmp/pip-pip-egg-info-rr9xte55/biobb_adapters.egg-info/dependency_links.txt 2021-10-30T07:59:37,222 writing manifest file '/tmp/pip-pip-egg-info-rr9xte55/biobb_adapters.egg-info/SOURCES.txt' 2021-10-30T07:59:37,659 reading manifest file '/tmp/pip-pip-egg-info-rr9xte55/biobb_adapters.egg-info/SOURCES.txt' 2021-10-30T07:59:37,662 reading manifest template 'MANIFEST.in' 2021-10-30T07:59:38,329 writing manifest file '/tmp/pip-pip-egg-info-rr9xte55/biobb_adapters.egg-info/SOURCES.txt' 2021-10-30T07:59:38,466 Source in /tmp/pip-wheel-ht84u89w/biobb-adapters_b5e19f0377be40d3980efc7154621b37 has version 3.7.0, which satisfies requirement biobb-adapters==3.7.0 from https://files.pythonhosted.org/packages/8d/bd/df127a6c4c110ffd8e6cf6a5a186fb0ddd180f7fd15f3283f5588834a605/biobb_adapters-3.7.0.tar.gz#sha256=5f7dd222332b76f4926dd47717690045bd67599fc94f365e1a1c099825400d88 2021-10-30T07:59:38,468 Removed biobb-adapters==3.7.0 from https://files.pythonhosted.org/packages/8d/bd/df127a6c4c110ffd8e6cf6a5a186fb0ddd180f7fd15f3283f5588834a605/biobb_adapters-3.7.0.tar.gz#sha256=5f7dd222332b76f4926dd47717690045bd67599fc94f365e1a1c099825400d88 from build tracker '/tmp/pip-req-tracker-fn9gzh4r' 2021-10-30T07:59:38,480 Created temporary directory: /tmp/pip-unpack-k7ty9jc4 2021-10-30T07:59:38,481 Building wheels for collected packages: biobb-adapters 2021-10-30T07:59:38,490 Created temporary directory: /tmp/pip-wheel-ph7ndo6f 2021-10-30T07:59:38,491 Building wheel for biobb-adapters (setup.py): started 2021-10-30T07:59:38,491 Destination directory: /tmp/pip-wheel-ph7ndo6f 2021-10-30T07:59:38,492 Running command /usr/bin/python3 -u -c 'import sys, setuptools, tokenize; sys.argv[0] = '"'"'/tmp/pip-wheel-ht84u89w/biobb-adapters_b5e19f0377be40d3980efc7154621b37/setup.py'"'"'; __file__='"'"'/tmp/pip-wheel-ht84u89w/biobb-adapters_b5e19f0377be40d3980efc7154621b37/setup.py'"'"';f=getattr(tokenize, '"'"'open'"'"', open)(__file__);code=f.read().replace('"'"'\r\n'"'"', '"'"'\n'"'"');f.close();exec(compile(code, __file__, '"'"'exec'"'"'))' bdist_wheel -d /tmp/pip-wheel-ph7ndo6f 2021-10-30T07:59:40,424 running bdist_wheel 2021-10-30T07:59:40,440 running build 2021-10-30T07:59:40,441 running build_py 2021-10-30T07:59:40,779 creating build 2021-10-30T07:59:40,779 creating build/lib 2021-10-30T07:59:40,781 creating build/lib/biobb_adapters 2021-10-30T07:59:40,784 copying biobb_adapters/__init__.py -> build/lib/biobb_adapters 2021-10-30T07:59:40,788 creating build/lib/biobb_adapters/pycompss 2021-10-30T07:59:40,790 copying biobb_adapters/pycompss/__init__.py -> build/lib/biobb_adapters/pycompss 2021-10-30T07:59:40,795 creating build/lib/biobb_adapters/pycompss/biobb_cmip 2021-10-30T07:59:40,796 copying biobb_adapters/pycompss/biobb_cmip/__init__.py -> build/lib/biobb_adapters/pycompss/biobb_cmip 2021-10-30T07:59:40,801 creating build/lib/biobb_adapters/pycompss/biobb_commons 2021-10-30T07:59:40,803 copying biobb_adapters/pycompss/biobb_commons/__init__.py -> build/lib/biobb_adapters/pycompss/biobb_commons 2021-10-30T07:59:40,808 copying biobb_adapters/pycompss/biobb_commons/task_config.py -> build/lib/biobb_adapters/pycompss/biobb_commons 2021-10-30T07:59:40,815 creating build/lib/biobb_adapters/pycompss/biobb_io 2021-10-30T07:59:40,817 copying biobb_adapters/pycompss/biobb_io/__init__.py -> build/lib/biobb_adapters/pycompss/biobb_io 2021-10-30T07:59:40,824 creating build/lib/biobb_adapters/pycompss/biobb_vs 2021-10-30T07:59:40,826 copying biobb_adapters/pycompss/biobb_vs/__init__.py -> build/lib/biobb_adapters/pycompss/biobb_vs 2021-10-30T07:59:40,830 creating build/lib/biobb_adapters/pycompss/biobb_ml 2021-10-30T07:59:40,832 copying biobb_adapters/pycompss/biobb_ml/__init__.py -> build/lib/biobb_adapters/pycompss/biobb_ml 2021-10-30T07:59:40,836 creating build/lib/biobb_adapters/pycompss/biobb_chemistry 2021-10-30T07:59:40,838 copying biobb_adapters/pycompss/biobb_chemistry/__init__.py -> build/lib/biobb_adapters/pycompss/biobb_chemistry 2021-10-30T07:59:40,843 creating build/lib/biobb_adapters/pycompss/biobb_amber 2021-10-30T07:59:40,845 copying biobb_adapters/pycompss/biobb_amber/__init__.py -> build/lib/biobb_adapters/pycompss/biobb_amber 2021-10-30T07:59:40,851 creating build/lib/biobb_adapters/pycompss/biobb_pmx 2021-10-30T07:59:40,854 copying biobb_adapters/pycompss/biobb_pmx/__init__.py -> build/lib/biobb_adapters/pycompss/biobb_pmx 2021-10-30T07:59:40,860 creating build/lib/biobb_adapters/pycompss/biobb_md 2021-10-30T07:59:40,862 copying biobb_adapters/pycompss/biobb_md/__init__.py -> build/lib/biobb_adapters/pycompss/biobb_md 2021-10-30T07:59:40,867 creating build/lib/biobb_adapters/pycompss/biobb_model 2021-10-30T07:59:40,869 copying biobb_adapters/pycompss/biobb_model/__init__.py -> build/lib/biobb_adapters/pycompss/biobb_model 2021-10-30T07:59:40,874 creating build/lib/biobb_adapters/pycompss/biobb_analysis 2021-10-30T07:59:40,875 copying biobb_adapters/pycompss/biobb_analysis/__init__.py -> build/lib/biobb_adapters/pycompss/biobb_analysis 2021-10-30T07:59:40,880 creating build/lib/biobb_adapters/pycompss/biobb_structure_utils 2021-10-30T07:59:40,881 copying biobb_adapters/pycompss/biobb_structure_utils/__init__.py -> build/lib/biobb_adapters/pycompss/biobb_structure_utils 2021-10-30T07:59:40,887 creating build/lib/biobb_adapters/pycompss/biobb_cmip/cmip 2021-10-30T07:59:40,890 copying biobb_adapters/pycompss/biobb_cmip/cmip/cmip.py -> build/lib/biobb_adapters/pycompss/biobb_cmip/cmip 2021-10-30T07:59:40,896 copying biobb_adapters/pycompss/biobb_cmip/cmip/__init__.py -> build/lib/biobb_adapters/pycompss/biobb_cmip/cmip 2021-10-30T07:59:40,900 copying biobb_adapters/pycompss/biobb_cmip/cmip/titration.py -> build/lib/biobb_adapters/pycompss/biobb_cmip/cmip 2021-10-30T07:59:40,909 creating build/lib/biobb_adapters/pycompss/biobb_io/api 2021-10-30T07:59:40,911 copying biobb_adapters/pycompss/biobb_io/api/pdb_variants_pc.py -> build/lib/biobb_adapters/pycompss/biobb_io/api 2021-10-30T07:59:40,915 copying biobb_adapters/pycompss/biobb_io/api/mmcif.py -> build/lib/biobb_adapters/pycompss/biobb_io/api 2021-10-30T07:59:40,919 copying biobb_adapters/pycompss/biobb_io/api/binding_site.py -> build/lib/biobb_adapters/pycompss/biobb_io/api 2021-10-30T07:59:40,923 copying biobb_adapters/pycompss/biobb_io/api/api_binding_site.py -> build/lib/biobb_adapters/pycompss/biobb_io/api 2021-10-30T07:59:40,928 copying biobb_adapters/pycompss/biobb_io/api/pdb_cluster_zip.py -> build/lib/biobb_adapters/pycompss/biobb_io/api 2021-10-30T07:59:40,934 copying biobb_adapters/pycompss/biobb_io/api/pdb_variants.py -> build/lib/biobb_adapters/pycompss/biobb_io/api 2021-10-30T07:59:40,940 copying biobb_adapters/pycompss/biobb_io/api/ligand_pc.py -> build/lib/biobb_adapters/pycompss/biobb_io/api 2021-10-30T07:59:40,945 copying biobb_adapters/pycompss/biobb_io/api/drugbank.py -> build/lib/biobb_adapters/pycompss/biobb_io/api 2021-10-30T07:59:40,949 copying biobb_adapters/pycompss/biobb_io/api/structure_info.py -> build/lib/biobb_adapters/pycompss/biobb_io/api 2021-10-30T07:59:40,953 copying biobb_adapters/pycompss/biobb_io/api/canonical_fasta.py -> build/lib/biobb_adapters/pycompss/biobb_io/api 2021-10-30T07:59:40,957 copying biobb_adapters/pycompss/biobb_io/api/memprotmd_sim_search.py -> build/lib/biobb_adapters/pycompss/biobb_io/api 2021-10-30T07:59:40,961 copying biobb_adapters/pycompss/biobb_io/api/pdb_pc.py -> build/lib/biobb_adapters/pycompss/biobb_io/api 2021-10-30T07:59:40,965 copying biobb_adapters/pycompss/biobb_io/api/__init__.py -> build/lib/biobb_adapters/pycompss/biobb_io/api 2021-10-30T07:59:40,970 copying biobb_adapters/pycompss/biobb_io/api/pdb.py -> build/lib/biobb_adapters/pycompss/biobb_io/api 2021-10-30T07:59:40,976 copying biobb_adapters/pycompss/biobb_io/api/memprotmd_sim_list.py -> build/lib/biobb_adapters/pycompss/biobb_io/api 2021-10-30T07:59:40,981 copying biobb_adapters/pycompss/biobb_io/api/pdb_cluster_zip_pc.py -> build/lib/biobb_adapters/pycompss/biobb_io/api 2021-10-30T07:59:40,987 copying biobb_adapters/pycompss/biobb_io/api/memprotmd_sim.py -> build/lib/biobb_adapters/pycompss/biobb_io/api 2021-10-30T07:59:40,991 copying biobb_adapters/pycompss/biobb_io/api/ligand.py -> build/lib/biobb_adapters/pycompss/biobb_io/api 2021-10-30T07:59:40,995 copying biobb_adapters/pycompss/biobb_io/api/ideal_sdf.py -> build/lib/biobb_adapters/pycompss/biobb_io/api 2021-10-30T07:59:41,000 creating build/lib/biobb_adapters/pycompss/biobb_vs/utils 2021-10-30T07:59:41,002 copying biobb_adapters/pycompss/biobb_vs/utils/extract_model_pdbqt.py -> build/lib/biobb_adapters/pycompss/biobb_vs/utils 2021-10-30T07:59:41,007 copying biobb_adapters/pycompss/biobb_vs/utils/box_residues.py -> build/lib/biobb_adapters/pycompss/biobb_vs/utils 2021-10-30T07:59:41,013 copying biobb_adapters/pycompss/biobb_vs/utils/box.py -> build/lib/biobb_adapters/pycompss/biobb_vs/utils 2021-10-30T07:59:41,019 copying biobb_adapters/pycompss/biobb_vs/utils/bindingsite.py -> build/lib/biobb_adapters/pycompss/biobb_vs/utils 2021-10-30T07:59:41,024 copying biobb_adapters/pycompss/biobb_vs/utils/__init__.py -> build/lib/biobb_adapters/pycompss/biobb_vs/utils 2021-10-30T07:59:41,030 creating build/lib/biobb_adapters/pycompss/biobb_vs/fpocket 2021-10-30T07:59:41,032 copying biobb_adapters/pycompss/biobb_vs/fpocket/fpocket_run.py -> build/lib/biobb_adapters/pycompss/biobb_vs/fpocket 2021-10-30T07:59:41,037 copying biobb_adapters/pycompss/biobb_vs/fpocket/fpocket.py -> build/lib/biobb_adapters/pycompss/biobb_vs/fpocket 2021-10-30T07:59:41,041 copying biobb_adapters/pycompss/biobb_vs/fpocket/fpocket_filter.py -> build/lib/biobb_adapters/pycompss/biobb_vs/fpocket 2021-10-30T07:59:41,045 copying biobb_adapters/pycompss/biobb_vs/fpocket/__init__.py -> build/lib/biobb_adapters/pycompss/biobb_vs/fpocket 2021-10-30T07:59:41,048 copying biobb_adapters/pycompss/biobb_vs/fpocket/fpocket_select.py -> build/lib/biobb_adapters/pycompss/biobb_vs/fpocket 2021-10-30T07:59:41,055 creating build/lib/biobb_adapters/pycompss/biobb_vs/vina 2021-10-30T07:59:41,058 copying biobb_adapters/pycompss/biobb_vs/vina/autodock_vina_run.py -> build/lib/biobb_adapters/pycompss/biobb_vs/vina 2021-10-30T07:59:41,064 copying biobb_adapters/pycompss/biobb_vs/vina/autodock_vina.py -> build/lib/biobb_adapters/pycompss/biobb_vs/vina 2021-10-30T07:59:41,070 copying biobb_adapters/pycompss/biobb_vs/vina/__init__.py -> build/lib/biobb_adapters/pycompss/biobb_vs/vina 2021-10-30T07:59:41,075 creating build/lib/biobb_adapters/pycompss/biobb_ml/clustering 2021-10-30T07:59:41,077 copying biobb_adapters/pycompss/biobb_ml/clustering/k_means.py -> build/lib/biobb_adapters/pycompss/biobb_ml/clustering 2021-10-30T07:59:41,081 copying biobb_adapters/pycompss/biobb_ml/clustering/agglomerative_clustering.py -> build/lib/biobb_adapters/pycompss/biobb_ml/clustering 2021-10-30T07:59:41,085 copying biobb_adapters/pycompss/biobb_ml/clustering/clustering_predict.py -> build/lib/biobb_adapters/pycompss/biobb_ml/clustering 2021-10-30T07:59:41,090 copying biobb_adapters/pycompss/biobb_ml/clustering/agglomerative_coefficient.py -> build/lib/biobb_adapters/pycompss/biobb_ml/clustering 2021-10-30T07:59:41,096 copying biobb_adapters/pycompss/biobb_ml/clustering/spectral_coefficient.py -> build/lib/biobb_adapters/pycompss/biobb_ml/clustering 2021-10-30T07:59:41,101 copying biobb_adapters/pycompss/biobb_ml/clustering/k_means_coefficient.py -> build/lib/biobb_adapters/pycompss/biobb_ml/clustering 2021-10-30T07:59:41,107 copying biobb_adapters/pycompss/biobb_ml/clustering/spectral_clustering.py -> build/lib/biobb_adapters/pycompss/biobb_ml/clustering 2021-10-30T07:59:41,111 copying biobb_adapters/pycompss/biobb_ml/clustering/dbscan.py -> build/lib/biobb_adapters/pycompss/biobb_ml/clustering 2021-10-30T07:59:41,115 copying biobb_adapters/pycompss/biobb_ml/clustering/__init__.py -> build/lib/biobb_adapters/pycompss/biobb_ml/clustering 2021-10-30T07:59:41,120 creating build/lib/biobb_adapters/pycompss/biobb_ml/utils 2021-10-30T07:59:41,122 copying biobb_adapters/pycompss/biobb_ml/utils/dummy_variables.py -> build/lib/biobb_adapters/pycompss/biobb_ml/utils 2021-10-30T07:59:41,127 copying biobb_adapters/pycompss/biobb_ml/utils/drop_columns.py -> build/lib/biobb_adapters/pycompss/biobb_ml/utils 2021-10-30T07:59:41,132 copying biobb_adapters/pycompss/biobb_ml/utils/map_variables.py -> build/lib/biobb_adapters/pycompss/biobb_ml/utils 2021-10-30T07:59:41,137 copying biobb_adapters/pycompss/biobb_ml/utils/__init__.py -> build/lib/biobb_adapters/pycompss/biobb_ml/utils 2021-10-30T07:59:41,142 copying biobb_adapters/pycompss/biobb_ml/utils/pairwise_comparison.py -> build/lib/biobb_adapters/pycompss/biobb_ml/utils 2021-10-30T07:59:41,148 copying biobb_adapters/pycompss/biobb_ml/utils/scale_columns.py -> build/lib/biobb_adapters/pycompss/biobb_ml/utils 2021-10-30T07:59:41,153 copying biobb_adapters/pycompss/biobb_ml/utils/dendrogram.py -> build/lib/biobb_adapters/pycompss/biobb_ml/utils 2021-10-30T07:59:41,157 copying biobb_adapters/pycompss/biobb_ml/utils/correlation_matrix.py -> build/lib/biobb_adapters/pycompss/biobb_ml/utils 2021-10-30T07:59:41,163 creating build/lib/biobb_adapters/pycompss/biobb_ml/classification 2021-10-30T07:59:41,165 copying biobb_adapters/pycompss/biobb_ml/classification/k_neighbors_coefficient.py -> build/lib/biobb_adapters/pycompss/biobb_ml/classification 2021-10-30T07:59:41,171 copying biobb_adapters/pycompss/biobb_ml/classification/k_neighbors.py -> build/lib/biobb_adapters/pycompss/biobb_ml/classification 2021-10-30T07:59:41,177 copying biobb_adapters/pycompss/biobb_ml/classification/random_forest_classifier.py -> build/lib/biobb_adapters/pycompss/biobb_ml/classification 2021-10-30T07:59:41,183 copying biobb_adapters/pycompss/biobb_ml/classification/logistic_regression.py -> build/lib/biobb_adapters/pycompss/biobb_ml/classification 2021-10-30T07:59:41,189 copying biobb_adapters/pycompss/biobb_ml/classification/decision_tree.py -> build/lib/biobb_adapters/pycompss/biobb_ml/classification 2021-10-30T07:59:41,194 copying biobb_adapters/pycompss/biobb_ml/classification/__init__.py -> build/lib/biobb_adapters/pycompss/biobb_ml/classification 2021-10-30T07:59:41,199 copying biobb_adapters/pycompss/biobb_ml/classification/support_vector_machine.py -> build/lib/biobb_adapters/pycompss/biobb_ml/classification 2021-10-30T07:59:41,205 copying biobb_adapters/pycompss/biobb_ml/classification/classification_predict.py -> build/lib/biobb_adapters/pycompss/biobb_ml/classification 2021-10-30T07:59:41,213 creating build/lib/biobb_adapters/pycompss/biobb_ml/dimensionality_reduction 2021-10-30T07:59:41,216 copying biobb_adapters/pycompss/biobb_ml/dimensionality_reduction/principal_component.py -> build/lib/biobb_adapters/pycompss/biobb_ml/dimensionality_reduction 2021-10-30T07:59:41,222 copying biobb_adapters/pycompss/biobb_ml/dimensionality_reduction/pls_components.py -> build/lib/biobb_adapters/pycompss/biobb_ml/dimensionality_reduction 2021-10-30T07:59:41,228 copying biobb_adapters/pycompss/biobb_ml/dimensionality_reduction/pls_regression.py -> build/lib/biobb_adapters/pycompss/biobb_ml/dimensionality_reduction 2021-10-30T07:59:41,233 copying biobb_adapters/pycompss/biobb_ml/dimensionality_reduction/__init__.py -> build/lib/biobb_adapters/pycompss/biobb_ml/dimensionality_reduction 2021-10-30T07:59:41,237 creating build/lib/biobb_adapters/pycompss/biobb_ml/regression 2021-10-30T07:59:41,239 copying biobb_adapters/pycompss/biobb_ml/regression/regression_predict.py -> build/lib/biobb_adapters/pycompss/biobb_ml/regression 2021-10-30T07:59:41,244 copying biobb_adapters/pycompss/biobb_ml/regression/polynomial_regression.py -> build/lib/biobb_adapters/pycompss/biobb_ml/regression 2021-10-30T07:59:41,248 copying biobb_adapters/pycompss/biobb_ml/regression/linear_regression.py -> build/lib/biobb_adapters/pycompss/biobb_ml/regression 2021-10-30T07:59:41,254 copying biobb_adapters/pycompss/biobb_ml/regression/random_forest_regressor.py -> build/lib/biobb_adapters/pycompss/biobb_ml/regression 2021-10-30T07:59:41,259 copying biobb_adapters/pycompss/biobb_ml/regression/__init__.py -> build/lib/biobb_adapters/pycompss/biobb_ml/regression 2021-10-30T07:59:41,267 creating build/lib/biobb_adapters/pycompss/biobb_ml/neural_networks 2021-10-30T07:59:41,269 copying biobb_adapters/pycompss/biobb_ml/neural_networks/regression_neural_network.py -> build/lib/biobb_adapters/pycompss/biobb_ml/neural_networks 2021-10-30T07:59:41,275 copying biobb_adapters/pycompss/biobb_ml/neural_networks/recurrent_neural_network.py -> build/lib/biobb_adapters/pycompss/biobb_ml/neural_networks 2021-10-30T07:59:41,279 copying biobb_adapters/pycompss/biobb_ml/neural_networks/neural_network_predict.py -> build/lib/biobb_adapters/pycompss/biobb_ml/neural_networks 2021-10-30T07:59:41,283 copying biobb_adapters/pycompss/biobb_ml/neural_networks/neural_network_decode.py -> build/lib/biobb_adapters/pycompss/biobb_ml/neural_networks 2021-10-30T07:59:41,288 copying biobb_adapters/pycompss/biobb_ml/neural_networks/autoencoder_neural_network.py -> build/lib/biobb_adapters/pycompss/biobb_ml/neural_networks 2021-10-30T07:59:41,292 copying biobb_adapters/pycompss/biobb_ml/neural_networks/classification_neural_network.py -> build/lib/biobb_adapters/pycompss/biobb_ml/neural_networks 2021-10-30T07:59:41,298 copying biobb_adapters/pycompss/biobb_ml/neural_networks/__init__.py -> build/lib/biobb_adapters/pycompss/biobb_ml/neural_networks 2021-10-30T07:59:41,304 creating build/lib/biobb_adapters/pycompss/biobb_ml/resampling 2021-10-30T07:59:41,307 copying biobb_adapters/pycompss/biobb_ml/resampling/resampling.py -> build/lib/biobb_adapters/pycompss/biobb_ml/resampling 2021-10-30T07:59:41,313 copying biobb_adapters/pycompss/biobb_ml/resampling/oversampling.py -> build/lib/biobb_adapters/pycompss/biobb_ml/resampling 2021-10-30T07:59:41,318 copying biobb_adapters/pycompss/biobb_ml/resampling/undersampling.py -> build/lib/biobb_adapters/pycompss/biobb_ml/resampling 2021-10-30T07:59:41,322 copying biobb_adapters/pycompss/biobb_ml/resampling/__init__.py -> build/lib/biobb_adapters/pycompss/biobb_ml/resampling 2021-10-30T07:59:41,327 creating build/lib/biobb_adapters/pycompss/biobb_chemistry/acpype 2021-10-30T07:59:41,329 copying biobb_adapters/pycompss/biobb_chemistry/acpype/acpype_params_ac_pc.py -> build/lib/biobb_adapters/pycompss/biobb_chemistry/acpype 2021-10-30T07:59:41,334 copying biobb_adapters/pycompss/biobb_chemistry/acpype/acpype_params_gmx_opls.py -> build/lib/biobb_adapters/pycompss/biobb_chemistry/acpype 2021-10-30T07:59:41,340 copying biobb_adapters/pycompss/biobb_chemistry/acpype/acpype_params_cns.py -> build/lib/biobb_adapters/pycompss/biobb_chemistry/acpype 2021-10-30T07:59:41,346 copying biobb_adapters/pycompss/biobb_chemistry/acpype/acpype_params_gmx_opls_pc.py -> build/lib/biobb_adapters/pycompss/biobb_chemistry/acpype 2021-10-30T07:59:41,352 copying biobb_adapters/pycompss/biobb_chemistry/acpype/acpype_params_ac.py -> build/lib/biobb_adapters/pycompss/biobb_chemistry/acpype 2021-10-30T07:59:41,357 copying biobb_adapters/pycompss/biobb_chemistry/acpype/acpype_params_gmx_pc.py -> build/lib/biobb_adapters/pycompss/biobb_chemistry/acpype 2021-10-30T07:59:41,360 copying biobb_adapters/pycompss/biobb_chemistry/acpype/__init__.py -> build/lib/biobb_adapters/pycompss/biobb_chemistry/acpype 2021-10-30T07:59:41,364 copying biobb_adapters/pycompss/biobb_chemistry/acpype/acpype_params_cns_pc.py -> build/lib/biobb_adapters/pycompss/biobb_chemistry/acpype 2021-10-30T07:59:41,368 copying biobb_adapters/pycompss/biobb_chemistry/acpype/acpype_params_gmx.py -> build/lib/biobb_adapters/pycompss/biobb_chemistry/acpype 2021-10-30T07:59:41,374 creating build/lib/biobb_adapters/pycompss/biobb_chemistry/babelm 2021-10-30T07:59:41,377 copying biobb_adapters/pycompss/biobb_chemistry/babelm/babel_remove_hydrogens.py -> build/lib/biobb_adapters/pycompss/biobb_chemistry/babelm 2021-10-30T07:59:41,383 copying biobb_adapters/pycompss/biobb_chemistry/babelm/babel_minimize.py -> build/lib/biobb_adapters/pycompss/biobb_chemistry/babelm 2021-10-30T07:59:41,389 copying biobb_adapters/pycompss/biobb_chemistry/babelm/babel_add_hydrogens_pc.py -> build/lib/biobb_adapters/pycompss/biobb_chemistry/babelm 2021-10-30T07:59:41,394 copying biobb_adapters/pycompss/biobb_chemistry/babelm/babel_remove_hydrogens_pc.py -> build/lib/biobb_adapters/pycompss/biobb_chemistry/babelm 2021-10-30T07:59:41,398 copying biobb_adapters/pycompss/biobb_chemistry/babelm/babel_convert_pc.py -> build/lib/biobb_adapters/pycompss/biobb_chemistry/babelm 2021-10-30T07:59:41,402 copying biobb_adapters/pycompss/biobb_chemistry/babelm/__init__.py -> build/lib/biobb_adapters/pycompss/biobb_chemistry/babelm 2021-10-30T07:59:41,405 copying biobb_adapters/pycompss/biobb_chemistry/babelm/babel_add_hydrogens.py -> build/lib/biobb_adapters/pycompss/biobb_chemistry/babelm 2021-10-30T07:59:41,410 copying biobb_adapters/pycompss/biobb_chemistry/babelm/babel_convert.py -> build/lib/biobb_adapters/pycompss/biobb_chemistry/babelm 2021-10-30T07:59:41,414 copying biobb_adapters/pycompss/biobb_chemistry/babelm/babel_minimize_pc.py -> build/lib/biobb_adapters/pycompss/biobb_chemistry/babelm 2021-10-30T07:59:41,422 creating build/lib/biobb_adapters/pycompss/biobb_chemistry/ambertools 2021-10-30T07:59:41,424 copying biobb_adapters/pycompss/biobb_chemistry/ambertools/reduce_remove_hydrogens.py -> build/lib/biobb_adapters/pycompss/biobb_chemistry/ambertools 2021-10-30T07:59:41,431 copying biobb_adapters/pycompss/biobb_chemistry/ambertools/reduce_remove_hydrogens_pc.py -> build/lib/biobb_adapters/pycompss/biobb_chemistry/ambertools 2021-10-30T07:59:41,435 copying biobb_adapters/pycompss/biobb_chemistry/ambertools/__init__.py -> build/lib/biobb_adapters/pycompss/biobb_chemistry/ambertools 2021-10-30T07:59:41,439 copying biobb_adapters/pycompss/biobb_chemistry/ambertools/reduce_add_hydrogens_pc.py -> build/lib/biobb_adapters/pycompss/biobb_chemistry/ambertools 2021-10-30T07:59:41,443 copying biobb_adapters/pycompss/biobb_chemistry/ambertools/reduce_add_hydrogens.py -> build/lib/biobb_adapters/pycompss/biobb_chemistry/ambertools 2021-10-30T07:59:41,448 creating build/lib/biobb_adapters/pycompss/biobb_amber/ambpdb 2021-10-30T07:59:41,450 copying biobb_adapters/pycompss/biobb_amber/ambpdb/amber_to_pdb.py -> build/lib/biobb_adapters/pycompss/biobb_amber/ambpdb 2021-10-30T07:59:41,454 copying biobb_adapters/pycompss/biobb_amber/ambpdb/__init__.py -> build/lib/biobb_adapters/pycompss/biobb_amber/ambpdb 2021-10-30T07:59:41,458 creating build/lib/biobb_adapters/pycompss/biobb_amber/sander 2021-10-30T07:59:41,461 copying biobb_adapters/pycompss/biobb_amber/sander/sander_mdrun.py -> build/lib/biobb_adapters/pycompss/biobb_amber/sander 2021-10-30T07:59:41,465 copying biobb_adapters/pycompss/biobb_amber/sander/__init__.py -> build/lib/biobb_adapters/pycompss/biobb_amber/sander 2021-10-30T07:59:41,469 creating build/lib/biobb_adapters/pycompss/biobb_amber/leap 2021-10-30T07:59:41,472 copying biobb_adapters/pycompss/biobb_amber/leap/leap_add_ions.py -> build/lib/biobb_adapters/pycompss/biobb_amber/leap 2021-10-30T07:59:41,476 copying biobb_adapters/pycompss/biobb_amber/leap/leap_solvate.py -> build/lib/biobb_adapters/pycompss/biobb_amber/leap 2021-10-30T07:59:41,480 copying biobb_adapters/pycompss/biobb_amber/leap/leap_gen_top.py -> build/lib/biobb_adapters/pycompss/biobb_amber/leap 2021-10-30T07:59:41,484 copying biobb_adapters/pycompss/biobb_amber/leap/__init__.py -> build/lib/biobb_adapters/pycompss/biobb_amber/leap 2021-10-30T07:59:41,488 copying biobb_adapters/pycompss/biobb_amber/leap/leap_build_linear_structure.py -> build/lib/biobb_adapters/pycompss/biobb_amber/leap 2021-10-30T07:59:41,493 creating build/lib/biobb_adapters/pycompss/biobb_amber/cpptraj 2021-10-30T07:59:41,495 copying biobb_adapters/pycompss/biobb_amber/cpptraj/cpptraj_randomize_ions.py -> build/lib/biobb_adapters/pycompss/biobb_amber/cpptraj 2021-10-30T07:59:41,499 copying biobb_adapters/pycompss/biobb_amber/cpptraj/__init__.py -> build/lib/biobb_adapters/pycompss/biobb_amber/cpptraj 2021-10-30T07:59:41,504 creating build/lib/biobb_adapters/pycompss/biobb_amber/cphstats 2021-10-30T07:59:41,506 copying biobb_adapters/pycompss/biobb_amber/cphstats/cestats_run.py -> build/lib/biobb_adapters/pycompss/biobb_amber/cphstats 2021-10-30T07:59:41,510 copying biobb_adapters/pycompss/biobb_amber/cphstats/cphstats_run.py -> build/lib/biobb_adapters/pycompss/biobb_amber/cphstats 2021-10-30T07:59:41,514 copying biobb_adapters/pycompss/biobb_amber/cphstats/__init__.py -> build/lib/biobb_adapters/pycompss/biobb_amber/cphstats 2021-10-30T07:59:41,519 creating build/lib/biobb_adapters/pycompss/biobb_amber/parmed 2021-10-30T07:59:41,521 copying biobb_adapters/pycompss/biobb_amber/parmed/parmed_hmassrepartition.py -> build/lib/biobb_adapters/pycompss/biobb_amber/parmed 2021-10-30T07:59:41,525 copying biobb_adapters/pycompss/biobb_amber/parmed/__init__.py -> build/lib/biobb_adapters/pycompss/biobb_amber/parmed 2021-10-30T07:59:41,528 copying biobb_adapters/pycompss/biobb_amber/parmed/parmed_cpinutil.py -> build/lib/biobb_adapters/pycompss/biobb_amber/parmed 2021-10-30T07:59:41,533 creating build/lib/biobb_adapters/pycompss/biobb_amber/process 2021-10-30T07:59:41,535 copying biobb_adapters/pycompss/biobb_amber/process/process_minout.py -> build/lib/biobb_adapters/pycompss/biobb_amber/process 2021-10-30T07:59:41,540 copying biobb_adapters/pycompss/biobb_amber/process/process_mdout.py -> build/lib/biobb_adapters/pycompss/biobb_amber/process 2021-10-30T07:59:41,544 copying biobb_adapters/pycompss/biobb_amber/process/__init__.py -> build/lib/biobb_adapters/pycompss/biobb_amber/process 2021-10-30T07:59:41,548 creating build/lib/biobb_adapters/pycompss/biobb_amber/nab 2021-10-30T07:59:41,550 copying biobb_adapters/pycompss/biobb_amber/nab/nab_build_dna_structure.py -> build/lib/biobb_adapters/pycompss/biobb_amber/nab 2021-10-30T07:59:41,554 copying biobb_adapters/pycompss/biobb_amber/nab/__init__.py -> build/lib/biobb_adapters/pycompss/biobb_amber/nab 2021-10-30T07:59:41,558 creating build/lib/biobb_adapters/pycompss/biobb_amber/pmemd 2021-10-30T07:59:41,560 copying biobb_adapters/pycompss/biobb_amber/pmemd/pmemd_mdrun.py -> build/lib/biobb_adapters/pycompss/biobb_amber/pmemd 2021-10-30T07:59:41,564 copying biobb_adapters/pycompss/biobb_amber/pmemd/__init__.py -> build/lib/biobb_adapters/pycompss/biobb_amber/pmemd 2021-10-30T07:59:41,569 creating build/lib/biobb_adapters/pycompss/biobb_amber/pdb4amber 2021-10-30T07:59:41,571 copying biobb_adapters/pycompss/biobb_amber/pdb4amber/pdb4amber.py -> build/lib/biobb_adapters/pycompss/biobb_amber/pdb4amber 2021-10-30T07:59:41,575 copying biobb_adapters/pycompss/biobb_amber/pdb4amber/__init__.py -> build/lib/biobb_adapters/pycompss/biobb_amber/pdb4amber 2021-10-30T07:59:41,579 copying biobb_adapters/pycompss/biobb_amber/pdb4amber/pdb4amber_run.py -> build/lib/biobb_adapters/pycompss/biobb_amber/pdb4amber 2021-10-30T07:59:41,584 creating build/lib/biobb_adapters/pycompss/biobb_pmx/pmx 2021-10-30T07:59:41,586 copying biobb_adapters/pycompss/biobb_pmx/pmx/pmxgentop.py -> build/lib/biobb_adapters/pycompss/biobb_pmx/pmx 2021-10-30T07:59:41,591 copying biobb_adapters/pycompss/biobb_pmx/pmx/analyse_pc.py -> build/lib/biobb_adapters/pycompss/biobb_pmx/pmx 2021-10-30T07:59:41,595 copying biobb_adapters/pycompss/biobb_pmx/pmx/pmxanalyse.py -> build/lib/biobb_adapters/pycompss/biobb_pmx/pmx 2021-10-30T07:59:41,599 copying biobb_adapters/pycompss/biobb_pmx/pmx/gentop_pc.py -> build/lib/biobb_adapters/pycompss/biobb_pmx/pmx 2021-10-30T07:59:41,603 copying biobb_adapters/pycompss/biobb_pmx/pmx/__init__.py -> build/lib/biobb_adapters/pycompss/biobb_pmx/pmx 2021-10-30T07:59:41,607 copying biobb_adapters/pycompss/biobb_pmx/pmx/mutate_bst_pc.py -> build/lib/biobb_adapters/pycompss/biobb_pmx/pmx 2021-10-30T07:59:41,611 copying biobb_adapters/pycompss/biobb_pmx/pmx/pmxmutate.py -> build/lib/biobb_adapters/pycompss/biobb_pmx/pmx 2021-10-30T07:59:41,615 copying biobb_adapters/pycompss/biobb_pmx/pmx/mutate_pc.py -> build/lib/biobb_adapters/pycompss/biobb_pmx/pmx 2021-10-30T07:59:41,621 creating build/lib/biobb_adapters/pycompss/biobb_md/gromacs 2021-10-30T07:59:41,624 copying biobb_adapters/pycompss/biobb_md/gromacs/solvate.py -> build/lib/biobb_adapters/pycompss/biobb_md/gromacs 2021-10-30T07:59:41,628 copying biobb_adapters/pycompss/biobb_md/gromacs/gmxselect.py -> build/lib/biobb_adapters/pycompss/biobb_md/gromacs 2021-10-30T07:59:41,633 copying biobb_adapters/pycompss/biobb_md/gromacs/genrestr.py -> build/lib/biobb_adapters/pycompss/biobb_md/gromacs 2021-10-30T07:59:41,637 copying biobb_adapters/pycompss/biobb_md/gromacs/mdrun.py -> build/lib/biobb_adapters/pycompss/biobb_md/gromacs 2021-10-30T07:59:41,642 copying biobb_adapters/pycompss/biobb_md/gromacs/pdb2gmx.py -> build/lib/biobb_adapters/pycompss/biobb_md/gromacs 2021-10-30T07:59:41,646 copying biobb_adapters/pycompss/biobb_md/gromacs/make_ndx.py -> build/lib/biobb_adapters/pycompss/biobb_md/gromacs 2021-10-30T07:59:41,650 copying biobb_adapters/pycompss/biobb_md/gromacs/genion.py -> build/lib/biobb_adapters/pycompss/biobb_md/gromacs 2021-10-30T07:59:41,654 copying biobb_adapters/pycompss/biobb_md/gromacs/__init__.py -> build/lib/biobb_adapters/pycompss/biobb_md/gromacs 2021-10-30T07:59:41,658 copying biobb_adapters/pycompss/biobb_md/gromacs/grompp.py -> build/lib/biobb_adapters/pycompss/biobb_md/gromacs 2021-10-30T07:59:41,662 copying biobb_adapters/pycompss/biobb_md/gromacs/editconf.py -> build/lib/biobb_adapters/pycompss/biobb_md/gromacs 2021-10-30T07:59:41,666 copying biobb_adapters/pycompss/biobb_md/gromacs/grompp_mdrun.py -> build/lib/biobb_adapters/pycompss/biobb_md/gromacs 2021-10-30T07:59:41,672 creating build/lib/biobb_adapters/pycompss/biobb_md/gromacs_extra 2021-10-30T07:59:41,674 copying biobb_adapters/pycompss/biobb_md/gromacs_extra/ndx2resttop.py -> build/lib/biobb_adapters/pycompss/biobb_md/gromacs_extra 2021-10-30T07:59:41,679 copying biobb_adapters/pycompss/biobb_md/gromacs_extra/append_ligand_pc.py -> build/lib/biobb_adapters/pycompss/biobb_md/gromacs_extra 2021-10-30T07:59:41,683 copying biobb_adapters/pycompss/biobb_md/gromacs_extra/__init__.py -> build/lib/biobb_adapters/pycompss/biobb_md/gromacs_extra 2021-10-30T07:59:41,687 copying biobb_adapters/pycompss/biobb_md/gromacs_extra/ndx2resttop_pc.py -> build/lib/biobb_adapters/pycompss/biobb_md/gromacs_extra 2021-10-30T07:59:41,691 copying biobb_adapters/pycompss/biobb_md/gromacs_extra/append_ligand.py -> build/lib/biobb_adapters/pycompss/biobb_md/gromacs_extra 2021-10-30T07:59:41,697 creating build/lib/biobb_adapters/pycompss/biobb_model/model 2021-10-30T07:59:41,699 copying biobb_adapters/pycompss/biobb_model/model/fix_side_chain_pc.py -> build/lib/biobb_adapters/pycompss/biobb_model/model 2021-10-30T07:59:41,704 copying biobb_adapters/pycompss/biobb_model/model/mutate.py -> build/lib/biobb_adapters/pycompss/biobb_model/model 2021-10-30T07:59:41,708 copying biobb_adapters/pycompss/biobb_model/model/fix_backbone.py -> build/lib/biobb_adapters/pycompss/biobb_model/model 2021-10-30T07:59:41,713 copying biobb_adapters/pycompss/biobb_model/model/checking_log.py -> build/lib/biobb_adapters/pycompss/biobb_model/model 2021-10-30T07:59:41,717 copying biobb_adapters/pycompss/biobb_model/model/fix_amides.py -> build/lib/biobb_adapters/pycompss/biobb_model/model 2021-10-30T07:59:41,723 copying biobb_adapters/pycompss/biobb_model/model/fix_chirality.py -> build/lib/biobb_adapters/pycompss/biobb_model/model 2021-10-30T07:59:41,729 copying biobb_adapters/pycompss/biobb_model/model/fix_side_chain.py -> build/lib/biobb_adapters/pycompss/biobb_model/model 2021-10-30T07:59:41,734 copying biobb_adapters/pycompss/biobb_model/model/__init__.py -> build/lib/biobb_adapters/pycompss/biobb_model/model 2021-10-30T07:59:41,739 copying biobb_adapters/pycompss/biobb_model/model/mutate_pc.py -> build/lib/biobb_adapters/pycompss/biobb_model/model 2021-10-30T07:59:41,746 creating build/lib/biobb_adapters/pycompss/biobb_analysis/gromacs 2021-10-30T07:59:41,749 copying biobb_adapters/pycompss/biobb_analysis/gromacs/gmx_energy_pc.py -> build/lib/biobb_adapters/pycompss/biobb_analysis/gromacs 2021-10-30T07:59:41,754 copying biobb_adapters/pycompss/biobb_analysis/gromacs/gmx_rms.py -> build/lib/biobb_adapters/pycompss/biobb_analysis/gromacs 2021-10-30T07:59:41,758 copying biobb_adapters/pycompss/biobb_analysis/gromacs/gmx_trjconv_str.py -> build/lib/biobb_adapters/pycompss/biobb_analysis/gromacs 2021-10-30T07:59:41,762 copying biobb_adapters/pycompss/biobb_analysis/gromacs/gmx_image.py -> build/lib/biobb_adapters/pycompss/biobb_analysis/gromacs 2021-10-30T07:59:41,767 copying biobb_adapters/pycompss/biobb_analysis/gromacs/gmx_rgyr.py -> build/lib/biobb_adapters/pycompss/biobb_analysis/gromacs 2021-10-30T07:59:41,771 copying biobb_adapters/pycompss/biobb_analysis/gromacs/gmx_trjconv_str_pc.py -> build/lib/biobb_adapters/pycompss/biobb_analysis/gromacs 2021-10-30T07:59:41,775 copying biobb_adapters/pycompss/biobb_analysis/gromacs/gmx_trjconv_str_ens_pc.py -> build/lib/biobb_adapters/pycompss/biobb_analysis/gromacs 2021-10-30T07:59:41,780 copying biobb_adapters/pycompss/biobb_analysis/gromacs/gmx_rgyr_pc.py -> build/lib/biobb_adapters/pycompss/biobb_analysis/gromacs 2021-10-30T07:59:41,784 copying biobb_adapters/pycompss/biobb_analysis/gromacs/gmx_image_pc.py -> build/lib/biobb_adapters/pycompss/biobb_analysis/gromacs 2021-10-30T07:59:41,788 copying biobb_adapters/pycompss/biobb_analysis/gromacs/gmx_cluster_pc.py -> build/lib/biobb_adapters/pycompss/biobb_analysis/gromacs 2021-10-30T07:59:41,793 copying biobb_adapters/pycompss/biobb_analysis/gromacs/gmx_rms_pc.py -> build/lib/biobb_adapters/pycompss/biobb_analysis/gromacs 2021-10-30T07:59:41,797 copying biobb_adapters/pycompss/biobb_analysis/gromacs/gmx_cluster.py -> build/lib/biobb_adapters/pycompss/biobb_analysis/gromacs 2021-10-30T07:59:41,801 copying biobb_adapters/pycompss/biobb_analysis/gromacs/__init__.py -> build/lib/biobb_adapters/pycompss/biobb_analysis/gromacs 2021-10-30T07:59:41,805 copying biobb_adapters/pycompss/biobb_analysis/gromacs/gmx_trjconv_str_ens.py -> build/lib/biobb_adapters/pycompss/biobb_analysis/gromacs 2021-10-30T07:59:41,810 copying biobb_adapters/pycompss/biobb_analysis/gromacs/gmx_trjconv_trj.py -> build/lib/biobb_adapters/pycompss/biobb_analysis/gromacs 2021-10-30T07:59:41,814 copying biobb_adapters/pycompss/biobb_analysis/gromacs/gmx_trjconv_trj_pc.py -> build/lib/biobb_adapters/pycompss/biobb_analysis/gromacs 2021-10-30T07:59:41,818 copying biobb_adapters/pycompss/biobb_analysis/gromacs/gmx_energy.py -> build/lib/biobb_adapters/pycompss/biobb_analysis/gromacs 2021-10-30T07:59:41,830 creating build/lib/biobb_adapters/pycompss/biobb_analysis/ambertools 2021-10-30T07:59:41,833 copying biobb_adapters/pycompss/biobb_analysis/ambertools/cpptraj_slice.py -> build/lib/biobb_adapters/pycompss/biobb_analysis/ambertools 2021-10-30T07:59:41,840 copying biobb_adapters/pycompss/biobb_analysis/ambertools/cpptraj_rgyr.py -> build/lib/biobb_adapters/pycompss/biobb_analysis/ambertools 2021-10-30T07:59:41,845 copying biobb_adapters/pycompss/biobb_analysis/ambertools/cpptraj_bfactor.py -> build/lib/biobb_adapters/pycompss/biobb_analysis/ambertools 2021-10-30T07:59:41,849 copying biobb_adapters/pycompss/biobb_analysis/ambertools/cpptraj_convert_pc.py -> build/lib/biobb_adapters/pycompss/biobb_analysis/ambertools 2021-10-30T07:59:41,854 copying biobb_adapters/pycompss/biobb_analysis/ambertools/cpptraj_mask_pc.py -> build/lib/biobb_adapters/pycompss/biobb_analysis/ambertools 2021-10-30T07:59:41,858 copying biobb_adapters/pycompss/biobb_analysis/ambertools/cpptraj_dry_pc.py -> build/lib/biobb_adapters/pycompss/biobb_analysis/ambertools 2021-10-30T07:59:41,862 copying biobb_adapters/pycompss/biobb_analysis/ambertools/cpptraj_snapshot.py -> build/lib/biobb_adapters/pycompss/biobb_analysis/ambertools 2021-10-30T07:59:41,867 copying biobb_adapters/pycompss/biobb_analysis/ambertools/cpptraj_image.py -> build/lib/biobb_adapters/pycompss/biobb_analysis/ambertools 2021-10-30T07:59:41,871 copying biobb_adapters/pycompss/biobb_analysis/ambertools/cpptraj_average.py -> build/lib/biobb_adapters/pycompss/biobb_analysis/ambertools 2021-10-30T07:59:41,876 copying biobb_adapters/pycompss/biobb_analysis/ambertools/cpptraj_rmsf.py -> build/lib/biobb_adapters/pycompss/biobb_analysis/ambertools 2021-10-30T07:59:41,880 copying biobb_adapters/pycompss/biobb_analysis/ambertools/cpptraj_image_pc.py -> build/lib/biobb_adapters/pycompss/biobb_analysis/ambertools 2021-10-30T07:59:41,884 copying biobb_adapters/pycompss/biobb_analysis/ambertools/cpptraj_snapshot_pc.py -> build/lib/biobb_adapters/pycompss/biobb_analysis/ambertools 2021-10-30T07:59:41,889 copying biobb_adapters/pycompss/biobb_analysis/ambertools/cpptraj_bfactor_pc.py -> build/lib/biobb_adapters/pycompss/biobb_analysis/ambertools 2021-10-30T07:59:41,893 copying biobb_adapters/pycompss/biobb_analysis/ambertools/cpptraj_dry.py -> build/lib/biobb_adapters/pycompss/biobb_analysis/ambertools 2021-10-30T07:59:41,898 copying biobb_adapters/pycompss/biobb_analysis/ambertools/cpptraj_average_pc.py -> build/lib/biobb_adapters/pycompss/biobb_analysis/ambertools 2021-10-30T07:59:41,902 copying biobb_adapters/pycompss/biobb_analysis/ambertools/cpptraj_strip_pc.py -> build/lib/biobb_adapters/pycompss/biobb_analysis/ambertools 2021-10-30T07:59:41,906 copying biobb_adapters/pycompss/biobb_analysis/ambertools/__init__.py -> build/lib/biobb_adapters/pycompss/biobb_analysis/ambertools 2021-10-30T07:59:41,909 copying biobb_adapters/pycompss/biobb_analysis/ambertools/cpptraj_slice_pc.py -> build/lib/biobb_adapters/pycompss/biobb_analysis/ambertools 2021-10-30T07:59:41,913 copying biobb_adapters/pycompss/biobb_analysis/ambertools/cpptraj_strip.py -> build/lib/biobb_adapters/pycompss/biobb_analysis/ambertools 2021-10-30T07:59:41,918 copying biobb_adapters/pycompss/biobb_analysis/ambertools/cpptraj_rms.py -> build/lib/biobb_adapters/pycompss/biobb_analysis/ambertools 2021-10-30T07:59:41,922 copying biobb_adapters/pycompss/biobb_analysis/ambertools/cpptraj_rmsf_pc.py -> build/lib/biobb_adapters/pycompss/biobb_analysis/ambertools 2021-10-30T07:59:41,926 copying biobb_adapters/pycompss/biobb_analysis/ambertools/cpptraj_mask.py -> build/lib/biobb_adapters/pycompss/biobb_analysis/ambertools 2021-10-30T07:59:41,931 copying biobb_adapters/pycompss/biobb_analysis/ambertools/cpptraj_convert.py -> build/lib/biobb_adapters/pycompss/biobb_analysis/ambertools 2021-10-30T07:59:41,935 copying biobb_adapters/pycompss/biobb_analysis/ambertools/cpptraj_rms_pc.py -> build/lib/biobb_adapters/pycompss/biobb_analysis/ambertools 2021-10-30T07:59:41,939 copying biobb_adapters/pycompss/biobb_analysis/ambertools/cpptraj_rgyr_pc.py -> build/lib/biobb_adapters/pycompss/biobb_analysis/ambertools 2021-10-30T07:59:41,947 creating build/lib/biobb_adapters/pycompss/biobb_structure_utils/utils 2021-10-30T07:59:41,949 copying biobb_adapters/pycompss/biobb_structure_utils/utils/extract_atoms_pc.py -> build/lib/biobb_adapters/pycompss/biobb_structure_utils/utils 2021-10-30T07:59:41,954 copying biobb_adapters/pycompss/biobb_structure_utils/utils/renumber_structure.py -> build/lib/biobb_adapters/pycompss/biobb_structure_utils/utils 2021-10-30T07:59:41,958 copying biobb_adapters/pycompss/biobb_structure_utils/utils/extract_atoms.py -> build/lib/biobb_adapters/pycompss/biobb_structure_utils/utils 2021-10-30T07:59:41,962 copying biobb_adapters/pycompss/biobb_structure_utils/utils/structure_check.py -> build/lib/biobb_adapters/pycompss/biobb_structure_utils/utils 2021-10-30T07:59:41,967 copying biobb_adapters/pycompss/biobb_structure_utils/utils/str_check_add_hydrogens.py -> build/lib/biobb_adapters/pycompss/biobb_structure_utils/utils 2021-10-30T07:59:41,971 copying biobb_adapters/pycompss/biobb_structure_utils/utils/extract_model.py -> build/lib/biobb_adapters/pycompss/biobb_structure_utils/utils 2021-10-30T07:59:41,975 copying biobb_adapters/pycompss/biobb_structure_utils/utils/extract_heteroatoms_pc.py -> build/lib/biobb_adapters/pycompss/biobb_structure_utils/utils 2021-10-30T07:59:41,980 copying biobb_adapters/pycompss/biobb_structure_utils/utils/extract_molecule.py -> build/lib/biobb_adapters/pycompss/biobb_structure_utils/utils 2021-10-30T07:59:41,984 copying biobb_adapters/pycompss/biobb_structure_utils/utils/renumber_structures_pc.py -> build/lib/biobb_adapters/pycompss/biobb_structure_utils/utils 2021-10-30T07:59:41,988 copying biobb_adapters/pycompss/biobb_structure_utils/utils/cat_pdb.py -> build/lib/biobb_adapters/pycompss/biobb_structure_utils/utils 2021-10-30T07:59:41,992 copying biobb_adapters/pycompss/biobb_structure_utils/utils/extract_model_pc.py -> build/lib/biobb_adapters/pycompss/biobb_structure_utils/utils 2021-10-30T07:59:41,997 copying biobb_adapters/pycompss/biobb_structure_utils/utils/cat_pdb_pc.py -> build/lib/biobb_adapters/pycompss/biobb_structure_utils/utils 2021-10-30T07:59:42,001 copying biobb_adapters/pycompss/biobb_structure_utils/utils/remove_pdb_water.py -> build/lib/biobb_adapters/pycompss/biobb_structure_utils/utils 2021-10-30T07:59:42,005 copying biobb_adapters/pycompss/biobb_structure_utils/utils/extract_protein.py -> build/lib/biobb_adapters/pycompss/biobb_structure_utils/utils 2021-10-30T07:59:42,010 copying biobb_adapters/pycompss/biobb_structure_utils/utils/extract_chain_pc.py -> build/lib/biobb_adapters/pycompss/biobb_structure_utils/utils 2021-10-30T07:59:42,014 copying biobb_adapters/pycompss/biobb_structure_utils/utils/remove_ligand_pc.py -> build/lib/biobb_adapters/pycompss/biobb_structure_utils/utils 2021-10-30T07:59:42,018 copying biobb_adapters/pycompss/biobb_structure_utils/utils/extract_heteroatoms.py -> build/lib/biobb_adapters/pycompss/biobb_structure_utils/utils 2021-10-30T07:59:42,022 copying biobb_adapters/pycompss/biobb_structure_utils/utils/remove_ligand.py -> build/lib/biobb_adapters/pycompss/biobb_structure_utils/utils 2021-10-30T07:59:42,027 copying biobb_adapters/pycompss/biobb_structure_utils/utils/sort_gro_residues_pc.py -> build/lib/biobb_adapters/pycompss/biobb_structure_utils/utils 2021-10-30T07:59:42,031 copying biobb_adapters/pycompss/biobb_structure_utils/utils/extract_protein_pc.py -> build/lib/biobb_adapters/pycompss/biobb_structure_utils/utils 2021-10-30T07:59:42,034 copying biobb_adapters/pycompss/biobb_structure_utils/utils/__init__.py -> build/lib/biobb_adapters/pycompss/biobb_structure_utils/utils 2021-10-30T07:59:42,038 copying biobb_adapters/pycompss/biobb_structure_utils/utils/remove_pdb_water_pc.py -> build/lib/biobb_adapters/pycompss/biobb_structure_utils/utils 2021-10-30T07:59:42,042 copying biobb_adapters/pycompss/biobb_structure_utils/utils/extract_chain.py -> build/lib/biobb_adapters/pycompss/biobb_structure_utils/utils 2021-10-30T07:59:42,046 copying biobb_adapters/pycompss/biobb_structure_utils/utils/sort_gro_residues.py -> build/lib/biobb_adapters/pycompss/biobb_structure_utils/utils 2021-10-30T07:59:42,051 running egg_info 2021-10-30T07:59:42,080 writing dependency_links to biobb_adapters.egg-info/dependency_links.txt 2021-10-30T07:59:42,082 writing requirements to biobb_adapters.egg-info/requires.txt 2021-10-30T07:59:42,085 writing top-level names to biobb_adapters.egg-info/top_level.txt 2021-10-30T07:59:42,088 writing biobb_adapters.egg-info/PKG-INFO 2021-10-30T07:59:42,165 reading manifest file 'biobb_adapters.egg-info/SOURCES.txt' 2021-10-30T07:59:42,203 reading manifest template 'MANIFEST.in' 2021-10-30T07:59:42,790 writing manifest file 'biobb_adapters.egg-info/SOURCES.txt' 2021-10-30T07:59:42,922 creating build/lib/biobb_adapters/cwl 2021-10-30T07:59:42,924 creating build/lib/biobb_adapters/cwl/biobb_amber 2021-10-30T07:59:42,927 copying biobb_adapters/cwl/biobb_amber/amber_to_pdb.cwl -> build/lib/biobb_adapters/cwl/biobb_amber 2021-10-30T07:59:42,933 copying biobb_adapters/cwl/biobb_amber/cestats_run.cwl -> build/lib/biobb_adapters/cwl/biobb_amber 2021-10-30T07:59:42,940 copying biobb_adapters/cwl/biobb_amber/cphstats_run.cwl -> build/lib/biobb_adapters/cwl/biobb_amber 2021-10-30T07:59:42,948 copying biobb_adapters/cwl/biobb_amber/cpptraj_randomize_ions.cwl -> build/lib/biobb_adapters/cwl/biobb_amber 2021-10-30T07:59:42,956 copying biobb_adapters/cwl/biobb_amber/leap_add_ions.cwl -> build/lib/biobb_adapters/cwl/biobb_amber 2021-10-30T07:59:42,965 copying biobb_adapters/cwl/biobb_amber/leap_build_linear_structure.cwl -> build/lib/biobb_adapters/cwl/biobb_amber 2021-10-30T07:59:42,973 copying biobb_adapters/cwl/biobb_amber/leap_gen_top.cwl -> build/lib/biobb_adapters/cwl/biobb_amber 2021-10-30T07:59:42,981 copying biobb_adapters/cwl/biobb_amber/leap_solvate.cwl -> build/lib/biobb_adapters/cwl/biobb_amber 2021-10-30T07:59:42,988 copying biobb_adapters/cwl/biobb_amber/nab_build_dna_structure.cwl -> build/lib/biobb_adapters/cwl/biobb_amber 2021-10-30T07:59:42,995 copying biobb_adapters/cwl/biobb_amber/parmed_cpinutil.cwl -> build/lib/biobb_adapters/cwl/biobb_amber 2021-10-30T07:59:43,001 copying biobb_adapters/cwl/biobb_amber/parmed_hmassrepartition.cwl -> build/lib/biobb_adapters/cwl/biobb_amber 2021-10-30T07:59:43,007 copying biobb_adapters/cwl/biobb_amber/pdb4amber.cwl -> build/lib/biobb_adapters/cwl/biobb_amber 2021-10-30T07:59:43,012 copying biobb_adapters/cwl/biobb_amber/pdb4amber_run.cwl -> build/lib/biobb_adapters/cwl/biobb_amber 2021-10-30T07:59:43,016 copying biobb_adapters/cwl/biobb_amber/pmemd_mdrun.cwl -> build/lib/biobb_adapters/cwl/biobb_amber 2021-10-30T07:59:43,022 copying biobb_adapters/cwl/biobb_amber/process_mdout.cwl -> build/lib/biobb_adapters/cwl/biobb_amber 2021-10-30T07:59:43,027 copying biobb_adapters/cwl/biobb_amber/process_minout.cwl -> build/lib/biobb_adapters/cwl/biobb_amber 2021-10-30T07:59:43,032 copying biobb_adapters/cwl/biobb_amber/sander_mdrun.cwl -> build/lib/biobb_adapters/cwl/biobb_amber 2021-10-30T07:59:43,037 creating build/lib/biobb_adapters/cwl/biobb_amber/ambpdb 2021-10-30T07:59:43,039 copying biobb_adapters/cwl/biobb_amber/ambpdb/amber_to_pdb.cwl -> build/lib/biobb_adapters/cwl/biobb_amber/ambpdb 2021-10-30T07:59:43,044 creating build/lib/biobb_adapters/cwl/biobb_amber/cpptraj 2021-10-30T07:59:43,046 copying biobb_adapters/cwl/biobb_amber/cpptraj/cpptraj_randomize_ions.cwl -> build/lib/biobb_adapters/cwl/biobb_amber/cpptraj 2021-10-30T07:59:43,051 creating build/lib/biobb_adapters/cwl/biobb_amber/leap 2021-10-30T07:59:43,053 copying biobb_adapters/cwl/biobb_amber/leap/leap_add_ions.cwl -> build/lib/biobb_adapters/cwl/biobb_amber/leap 2021-10-30T07:59:43,059 copying biobb_adapters/cwl/biobb_amber/leap/leap_build_linear_structure.cwl -> build/lib/biobb_adapters/cwl/biobb_amber/leap 2021-10-30T07:59:43,063 copying biobb_adapters/cwl/biobb_amber/leap/leap_gen_top.cwl -> build/lib/biobb_adapters/cwl/biobb_amber/leap 2021-10-30T07:59:43,069 copying biobb_adapters/cwl/biobb_amber/leap/leap_solvate.cwl -> build/lib/biobb_adapters/cwl/biobb_amber/leap 2021-10-30T07:59:43,074 creating build/lib/biobb_adapters/cwl/biobb_amber/nap 2021-10-30T07:59:43,076 copying biobb_adapters/cwl/biobb_amber/nap/nab_build_dna_structure.cwl -> build/lib/biobb_adapters/cwl/biobb_amber/nap 2021-10-30T07:59:43,081 creating build/lib/biobb_adapters/cwl/biobb_amber/parmed 2021-10-30T07:59:43,083 copying biobb_adapters/cwl/biobb_amber/parmed/parmed_cpinutil.cwl -> build/lib/biobb_adapters/cwl/biobb_amber/parmed 2021-10-30T07:59:43,089 copying biobb_adapters/cwl/biobb_amber/parmed/parmed_hmassrepartition.cwl -> build/lib/biobb_adapters/cwl/biobb_amber/parmed 2021-10-30T07:59:43,095 creating build/lib/biobb_adapters/cwl/biobb_amber/pdb4amber 2021-10-30T07:59:43,098 copying biobb_adapters/cwl/biobb_amber/pdb4amber/pdb4amber.cwl -> build/lib/biobb_adapters/cwl/biobb_amber/pdb4amber 2021-10-30T07:59:43,104 creating build/lib/biobb_adapters/cwl/biobb_amber/pmemd 2021-10-30T07:59:43,107 copying biobb_adapters/cwl/biobb_amber/pmemd/pmemd_mdrun.cwl -> build/lib/biobb_adapters/cwl/biobb_amber/pmemd 2021-10-30T07:59:43,113 creating build/lib/biobb_adapters/cwl/biobb_amber/process 2021-10-30T07:59:43,115 copying biobb_adapters/cwl/biobb_amber/process/process_mdout.cwl -> build/lib/biobb_adapters/cwl/biobb_amber/process 2021-10-30T07:59:43,120 copying biobb_adapters/cwl/biobb_amber/process/process_minout.cwl -> build/lib/biobb_adapters/cwl/biobb_amber/process 2021-10-30T07:59:43,124 creating build/lib/biobb_adapters/cwl/biobb_amber/sander 2021-10-30T07:59:43,126 copying biobb_adapters/cwl/biobb_amber/sander/sander_mdrun.cwl -> build/lib/biobb_adapters/cwl/biobb_amber/sander 2021-10-30T07:59:43,132 creating build/lib/biobb_adapters/cwl/biobb_analysis 2021-10-30T07:59:43,134 copying biobb_adapters/cwl/biobb_analysis/cpptraj_average.cwl -> build/lib/biobb_adapters/cwl/biobb_analysis 2021-10-30T07:59:43,139 copying biobb_adapters/cwl/biobb_analysis/cpptraj_bfactor.cwl -> build/lib/biobb_adapters/cwl/biobb_analysis 2021-10-30T07:59:43,144 copying biobb_adapters/cwl/biobb_analysis/cpptraj_convert.cwl -> build/lib/biobb_adapters/cwl/biobb_analysis 2021-10-30T07:59:43,150 copying biobb_adapters/cwl/biobb_analysis/cpptraj_dry.cwl -> build/lib/biobb_adapters/cwl/biobb_analysis 2021-10-30T07:59:43,157 copying biobb_adapters/cwl/biobb_analysis/cpptraj_image.cwl -> build/lib/biobb_adapters/cwl/biobb_analysis 2021-10-30T07:59:43,163 copying biobb_adapters/cwl/biobb_analysis/cpptraj_mask.cwl -> build/lib/biobb_adapters/cwl/biobb_analysis 2021-10-30T07:59:43,169 copying biobb_adapters/cwl/biobb_analysis/cpptraj_rgyr.cwl -> build/lib/biobb_adapters/cwl/biobb_analysis 2021-10-30T07:59:43,174 copying biobb_adapters/cwl/biobb_analysis/cpptraj_rms.cwl -> build/lib/biobb_adapters/cwl/biobb_analysis 2021-10-30T07:59:43,179 copying biobb_adapters/cwl/biobb_analysis/cpptraj_rmsf.cwl -> build/lib/biobb_adapters/cwl/biobb_analysis 2021-10-30T07:59:43,185 copying biobb_adapters/cwl/biobb_analysis/cpptraj_slice.cwl -> build/lib/biobb_adapters/cwl/biobb_analysis 2021-10-30T07:59:43,189 copying biobb_adapters/cwl/biobb_analysis/cpptraj_snapshot.cwl -> build/lib/biobb_adapters/cwl/biobb_analysis 2021-10-30T07:59:43,194 copying biobb_adapters/cwl/biobb_analysis/cpptraj_strip.cwl -> build/lib/biobb_adapters/cwl/biobb_analysis 2021-10-30T07:59:43,199 copying biobb_adapters/cwl/biobb_analysis/gmx_cluster.cwl -> build/lib/biobb_adapters/cwl/biobb_analysis 2021-10-30T07:59:43,204 copying biobb_adapters/cwl/biobb_analysis/gmx_energy.cwl -> build/lib/biobb_adapters/cwl/biobb_analysis 2021-10-30T07:59:43,209 copying biobb_adapters/cwl/biobb_analysis/gmx_image.cwl -> build/lib/biobb_adapters/cwl/biobb_analysis 2021-10-30T07:59:43,216 copying biobb_adapters/cwl/biobb_analysis/gmx_rgyr.cwl -> build/lib/biobb_adapters/cwl/biobb_analysis 2021-10-30T07:59:43,223 copying biobb_adapters/cwl/biobb_analysis/gmx_rms.cwl -> build/lib/biobb_adapters/cwl/biobb_analysis 2021-10-30T07:59:43,230 copying biobb_adapters/cwl/biobb_analysis/gmx_trjconv_str.cwl -> build/lib/biobb_adapters/cwl/biobb_analysis 2021-10-30T07:59:43,235 copying biobb_adapters/cwl/biobb_analysis/gmx_trjconv_str_ens.cwl -> build/lib/biobb_adapters/cwl/biobb_analysis 2021-10-30T07:59:43,240 copying biobb_adapters/cwl/biobb_analysis/gmx_trjconv_trj.cwl -> build/lib/biobb_adapters/cwl/biobb_analysis 2021-10-30T07:59:43,245 creating build/lib/biobb_adapters/cwl/biobb_analysis/ambertools 2021-10-30T07:59:43,247 copying biobb_adapters/cwl/biobb_analysis/ambertools/cpptraj_average.cwl -> build/lib/biobb_adapters/cwl/biobb_analysis/ambertools 2021-10-30T07:59:43,254 copying biobb_adapters/cwl/biobb_analysis/ambertools/cpptraj_bfactor.cwl -> build/lib/biobb_adapters/cwl/biobb_analysis/ambertools 2021-10-30T07:59:43,261 copying biobb_adapters/cwl/biobb_analysis/ambertools/cpptraj_convert.cwl -> build/lib/biobb_adapters/cwl/biobb_analysis/ambertools 2021-10-30T07:59:43,268 copying biobb_adapters/cwl/biobb_analysis/ambertools/cpptraj_dry.cwl -> build/lib/biobb_adapters/cwl/biobb_analysis/ambertools 2021-10-30T07:59:43,274 copying biobb_adapters/cwl/biobb_analysis/ambertools/cpptraj_image.cwl -> build/lib/biobb_adapters/cwl/biobb_analysis/ambertools 2021-10-30T07:59:43,279 copying biobb_adapters/cwl/biobb_analysis/ambertools/cpptraj_mask.cwl -> build/lib/biobb_adapters/cwl/biobb_analysis/ambertools 2021-10-30T07:59:43,284 copying biobb_adapters/cwl/biobb_analysis/ambertools/cpptraj_rgyr.cwl -> build/lib/biobb_adapters/cwl/biobb_analysis/ambertools 2021-10-30T07:59:43,290 copying biobb_adapters/cwl/biobb_analysis/ambertools/cpptraj_rms.cwl -> build/lib/biobb_adapters/cwl/biobb_analysis/ambertools 2021-10-30T07:59:43,297 copying biobb_adapters/cwl/biobb_analysis/ambertools/cpptraj_rmsf.cwl -> build/lib/biobb_adapters/cwl/biobb_analysis/ambertools 2021-10-30T07:59:43,304 copying biobb_adapters/cwl/biobb_analysis/ambertools/cpptraj_slice.cwl -> build/lib/biobb_adapters/cwl/biobb_analysis/ambertools 2021-10-30T07:59:43,311 copying biobb_adapters/cwl/biobb_analysis/ambertools/cpptraj_snapshot.cwl -> build/lib/biobb_adapters/cwl/biobb_analysis/ambertools 2021-10-30T07:59:43,316 copying biobb_adapters/cwl/biobb_analysis/ambertools/cpptraj_strip.cwl -> build/lib/biobb_adapters/cwl/biobb_analysis/ambertools 2021-10-30T07:59:43,321 creating build/lib/biobb_adapters/cwl/biobb_analysis/gromacs 2021-10-30T07:59:43,323 copying biobb_adapters/cwl/biobb_analysis/gromacs/gmx_cluster.cwl -> build/lib/biobb_adapters/cwl/biobb_analysis/gromacs 2021-10-30T07:59:43,329 copying biobb_adapters/cwl/biobb_analysis/gromacs/gmx_energy.cwl -> build/lib/biobb_adapters/cwl/biobb_analysis/gromacs 2021-10-30T07:59:43,336 copying biobb_adapters/cwl/biobb_analysis/gromacs/gmx_image.cwl -> build/lib/biobb_adapters/cwl/biobb_analysis/gromacs 2021-10-30T07:59:43,343 copying biobb_adapters/cwl/biobb_analysis/gromacs/gmx_rgyr.cwl -> build/lib/biobb_adapters/cwl/biobb_analysis/gromacs 2021-10-30T07:59:43,350 copying biobb_adapters/cwl/biobb_analysis/gromacs/gmx_rms.cwl -> build/lib/biobb_adapters/cwl/biobb_analysis/gromacs 2021-10-30T07:59:43,355 copying biobb_adapters/cwl/biobb_analysis/gromacs/gmx_trjconv_str.cwl -> build/lib/biobb_adapters/cwl/biobb_analysis/gromacs 2021-10-30T07:59:43,360 copying biobb_adapters/cwl/biobb_analysis/gromacs/gmx_trjconv_str_ens.cwl -> build/lib/biobb_adapters/cwl/biobb_analysis/gromacs 2021-10-30T07:59:43,366 copying biobb_adapters/cwl/biobb_analysis/gromacs/gmx_trjconv_trj.cwl -> build/lib/biobb_adapters/cwl/biobb_analysis/gromacs 2021-10-30T07:59:43,371 creating build/lib/biobb_adapters/cwl/biobb_analysis/test 2021-10-30T07:59:43,373 copying biobb_adapters/cwl/biobb_analysis/test/cwl_unitest.sh -> build/lib/biobb_adapters/cwl/biobb_analysis/test 2021-10-30T07:59:43,380 creating build/lib/biobb_adapters/cwl/biobb_analysis/test/ambertools 2021-10-30T07:59:43,383 copying biobb_adapters/cwl/biobb_analysis/test/ambertools/cpptraj_average.yml -> build/lib/biobb_adapters/cwl/biobb_analysis/test/ambertools 2021-10-30T07:59:43,391 copying biobb_adapters/cwl/biobb_analysis/test/ambertools/cpptraj_bfactor.yml -> build/lib/biobb_adapters/cwl/biobb_analysis/test/ambertools 2021-10-30T07:59:43,396 copying biobb_adapters/cwl/biobb_analysis/test/ambertools/cpptraj_convert.yml -> build/lib/biobb_adapters/cwl/biobb_analysis/test/ambertools 2021-10-30T07:59:43,401 copying biobb_adapters/cwl/biobb_analysis/test/ambertools/cpptraj_dry.yml -> build/lib/biobb_adapters/cwl/biobb_analysis/test/ambertools 2021-10-30T07:59:43,406 copying biobb_adapters/cwl/biobb_analysis/test/ambertools/cpptraj_image.yml -> build/lib/biobb_adapters/cwl/biobb_analysis/test/ambertools 2021-10-30T07:59:43,411 copying biobb_adapters/cwl/biobb_analysis/test/ambertools/cpptraj_mask.yml -> build/lib/biobb_adapters/cwl/biobb_analysis/test/ambertools 2021-10-30T07:59:43,418 copying biobb_adapters/cwl/biobb_analysis/test/ambertools/cpptraj_rgyr.yml -> build/lib/biobb_adapters/cwl/biobb_analysis/test/ambertools 2021-10-30T07:59:43,425 copying biobb_adapters/cwl/biobb_analysis/test/ambertools/cpptraj_rms.yml -> build/lib/biobb_adapters/cwl/biobb_analysis/test/ambertools 2021-10-30T07:59:43,432 copying biobb_adapters/cwl/biobb_analysis/test/ambertools/cpptraj_rmsf.yml -> build/lib/biobb_adapters/cwl/biobb_analysis/test/ambertools 2021-10-30T07:59:43,437 copying biobb_adapters/cwl/biobb_analysis/test/ambertools/cpptraj_slice.yml -> build/lib/biobb_adapters/cwl/biobb_analysis/test/ambertools 2021-10-30T07:59:43,441 copying biobb_adapters/cwl/biobb_analysis/test/ambertools/cpptraj_snapshot.yml -> build/lib/biobb_adapters/cwl/biobb_analysis/test/ambertools 2021-10-30T07:59:43,446 copying biobb_adapters/cwl/biobb_analysis/test/ambertools/cpptraj_strip.yml -> build/lib/biobb_adapters/cwl/biobb_analysis/test/ambertools 2021-10-30T07:59:43,451 creating build/lib/biobb_adapters/cwl/biobb_analysis/test/data 2021-10-30T07:59:43,452 creating build/lib/biobb_adapters/cwl/biobb_analysis/test/data/ambertools 2021-10-30T07:59:43,456 copying biobb_adapters/cwl/biobb_analysis/test/data/ambertools/cpptraj.parm.top -> build/lib/biobb_adapters/cwl/biobb_analysis/test/data/ambertools 2021-10-30T07:59:43,855 copying biobb_adapters/cwl/biobb_analysis/test/data/ambertools/cpptraj.traj.dcd -> build/lib/biobb_adapters/cwl/biobb_analysis/test/data/ambertools 2021-10-30T07:59:44,485 creating build/lib/biobb_adapters/cwl/biobb_analysis/test/data/gromacs 2021-10-30T07:59:44,487 copying biobb_adapters/cwl/biobb_analysis/test/data/gromacs/energy.edr -> build/lib/biobb_adapters/cwl/biobb_analysis/test/data/gromacs 2021-10-30T07:59:44,494 copying biobb_adapters/cwl/biobb_analysis/test/data/gromacs/topology.tpr -> build/lib/biobb_adapters/cwl/biobb_analysis/test/data/gromacs 2021-10-30T07:59:44,600 copying biobb_adapters/cwl/biobb_analysis/test/data/gromacs/trajectory.trr -> build/lib/biobb_adapters/cwl/biobb_analysis/test/data/gromacs 2021-10-30T07:59:45,324 creating build/lib/biobb_adapters/cwl/biobb_analysis/test/gromacs 2021-10-30T07:59:45,327 copying biobb_adapters/cwl/biobb_analysis/test/gromacs/gmx_cluster.yml -> build/lib/biobb_adapters/cwl/biobb_analysis/test/gromacs 2021-10-30T07:59:45,333 copying biobb_adapters/cwl/biobb_analysis/test/gromacs/gmx_energy.yml -> build/lib/biobb_adapters/cwl/biobb_analysis/test/gromacs 2021-10-30T07:59:45,338 copying biobb_adapters/cwl/biobb_analysis/test/gromacs/gmx_image.yml -> build/lib/biobb_adapters/cwl/biobb_analysis/test/gromacs 2021-10-30T07:59:45,343 copying biobb_adapters/cwl/biobb_analysis/test/gromacs/gmx_rgyr.yml -> build/lib/biobb_adapters/cwl/biobb_analysis/test/gromacs 2021-10-30T07:59:45,348 copying biobb_adapters/cwl/biobb_analysis/test/gromacs/gmx_rms.yml -> build/lib/biobb_adapters/cwl/biobb_analysis/test/gromacs 2021-10-30T07:59:45,355 copying biobb_adapters/cwl/biobb_analysis/test/gromacs/gmx_trjconv_str.yml -> build/lib/biobb_adapters/cwl/biobb_analysis/test/gromacs 2021-10-30T07:59:45,361 copying biobb_adapters/cwl/biobb_analysis/test/gromacs/gmx_trjconv_str_ens.yml -> build/lib/biobb_adapters/cwl/biobb_analysis/test/gromacs 2021-10-30T07:59:45,368 copying biobb_adapters/cwl/biobb_analysis/test/gromacs/gmx_trjconv_trj.yml -> build/lib/biobb_adapters/cwl/biobb_analysis/test/gromacs 2021-10-30T07:59:45,372 creating build/lib/biobb_adapters/cwl/biobb_chemistry 2021-10-30T07:59:45,374 copying biobb_adapters/cwl/biobb_chemistry/acpype_params_ac.cwl -> build/lib/biobb_adapters/cwl/biobb_chemistry 2021-10-30T07:59:45,380 copying biobb_adapters/cwl/biobb_chemistry/acpype_params_cns.cwl -> build/lib/biobb_adapters/cwl/biobb_chemistry 2021-10-30T07:59:46,954 copying biobb_adapters/cwl/biobb_chemistry/acpype_params_gmx.cwl -> build/lib/biobb_adapters/cwl/biobb_chemistry 2021-10-30T07:59:46,960 copying biobb_adapters/cwl/biobb_chemistry/acpype_params_gmx_opls.cwl -> build/lib/biobb_adapters/cwl/biobb_chemistry 2021-10-30T07:59:46,967 copying biobb_adapters/cwl/biobb_chemistry/babel_add_hydrogens.cwl -> build/lib/biobb_adapters/cwl/biobb_chemistry 2021-10-30T07:59:46,973 copying biobb_adapters/cwl/biobb_chemistry/babel_convert.cwl -> build/lib/biobb_adapters/cwl/biobb_chemistry 2021-10-30T07:59:46,980 copying biobb_adapters/cwl/biobb_chemistry/babel_minimize.cwl -> build/lib/biobb_adapters/cwl/biobb_chemistry 2021-10-30T07:59:46,987 copying biobb_adapters/cwl/biobb_chemistry/babel_remove_hydrogens.cwl -> build/lib/biobb_adapters/cwl/biobb_chemistry 2021-10-30T07:59:46,993 copying biobb_adapters/cwl/biobb_chemistry/reduce_add_hydrogens.cwl -> build/lib/biobb_adapters/cwl/biobb_chemistry 2021-10-30T07:59:46,997 copying biobb_adapters/cwl/biobb_chemistry/reduce_remove_hydrogens.cwl -> build/lib/biobb_adapters/cwl/biobb_chemistry 2021-10-30T07:59:47,002 creating build/lib/biobb_adapters/cwl/biobb_chemistry/acpype 2021-10-30T07:59:47,004 copying biobb_adapters/cwl/biobb_chemistry/acpype/acpype_params_ac.cwl -> build/lib/biobb_adapters/cwl/biobb_chemistry/acpype 2021-10-30T07:59:47,010 copying biobb_adapters/cwl/biobb_chemistry/acpype/acpype_params_cns.cwl -> build/lib/biobb_adapters/cwl/biobb_chemistry/acpype 2021-10-30T07:59:47,017 copying biobb_adapters/cwl/biobb_chemistry/acpype/acpype_params_gmx.cwl -> build/lib/biobb_adapters/cwl/biobb_chemistry/acpype 2021-10-30T07:59:47,024 copying biobb_adapters/cwl/biobb_chemistry/acpype/acpype_params_gmx_opls.cwl -> build/lib/biobb_adapters/cwl/biobb_chemistry/acpype 2021-10-30T07:59:47,031 creating build/lib/biobb_adapters/cwl/biobb_chemistry/ambertools 2021-10-30T07:59:47,032 copying biobb_adapters/cwl/biobb_chemistry/ambertools/reduce_add_hydrogens.cwl -> build/lib/biobb_adapters/cwl/biobb_chemistry/ambertools 2021-10-30T07:59:47,038 copying biobb_adapters/cwl/biobb_chemistry/ambertools/reduce_remove_hydrogens.cwl -> build/lib/biobb_adapters/cwl/biobb_chemistry/ambertools 2021-10-30T07:59:47,043 creating build/lib/biobb_adapters/cwl/biobb_chemistry/babelm 2021-10-30T07:59:47,045 copying biobb_adapters/cwl/biobb_chemistry/babelm/babel_add_hydrogens.cwl -> build/lib/biobb_adapters/cwl/biobb_chemistry/babelm 2021-10-30T07:59:47,050 copying biobb_adapters/cwl/biobb_chemistry/babelm/babel_convert.cwl -> build/lib/biobb_adapters/cwl/biobb_chemistry/babelm 2021-10-30T07:59:47,057 copying biobb_adapters/cwl/biobb_chemistry/babelm/babel_minimize.cwl -> build/lib/biobb_adapters/cwl/biobb_chemistry/babelm 2021-10-30T07:59:47,064 copying biobb_adapters/cwl/biobb_chemistry/babelm/babel_remove_hydrogens.cwl -> build/lib/biobb_adapters/cwl/biobb_chemistry/babelm 2021-10-30T07:59:47,070 creating build/lib/biobb_adapters/cwl/biobb_chemistry/test 2021-10-30T07:59:47,073 copying biobb_adapters/cwl/biobb_chemistry/test/cwl_unitest.sh -> build/lib/biobb_adapters/cwl/biobb_chemistry/test 2021-10-30T07:59:47,080 creating build/lib/biobb_adapters/cwl/biobb_chemistry/test/acpype 2021-10-30T07:59:47,083 copying biobb_adapters/cwl/biobb_chemistry/test/acpype/acpype_params_ac.yml -> build/lib/biobb_adapters/cwl/biobb_chemistry/test/acpype 2021-10-30T07:59:47,090 copying biobb_adapters/cwl/biobb_chemistry/test/acpype/acpype_params_cns.yml -> build/lib/biobb_adapters/cwl/biobb_chemistry/test/acpype 2021-10-30T07:59:47,096 copying biobb_adapters/cwl/biobb_chemistry/test/acpype/acpype_params_gmx.yml -> build/lib/biobb_adapters/cwl/biobb_chemistry/test/acpype 2021-10-30T07:59:47,103 copying biobb_adapters/cwl/biobb_chemistry/test/acpype/acpype_params_gmx_opls.yml -> build/lib/biobb_adapters/cwl/biobb_chemistry/test/acpype 2021-10-30T07:59:47,109 creating build/lib/biobb_adapters/cwl/biobb_chemistry/test/ambertools 2021-10-30T07:59:47,112 copying biobb_adapters/cwl/biobb_chemistry/test/ambertools/reduce_add_hydrogens.yml -> build/lib/biobb_adapters/cwl/biobb_chemistry/test/ambertools 2021-10-30T07:59:47,117 copying biobb_adapters/cwl/biobb_chemistry/test/ambertools/reduce_remove_hydrogens.yml -> build/lib/biobb_adapters/cwl/biobb_chemistry/test/ambertools 2021-10-30T07:59:47,122 creating build/lib/biobb_adapters/cwl/biobb_chemistry/test/babelm 2021-10-30T07:59:47,124 copying biobb_adapters/cwl/biobb_chemistry/test/babelm/babel_add_hydrogens.yml -> build/lib/biobb_adapters/cwl/biobb_chemistry/test/babelm 2021-10-30T07:59:47,129 copying biobb_adapters/cwl/biobb_chemistry/test/babelm/babel_convert.yml -> build/lib/biobb_adapters/cwl/biobb_chemistry/test/babelm 2021-10-30T07:59:47,135 copying biobb_adapters/cwl/biobb_chemistry/test/babelm/babel_minimize.yml -> build/lib/biobb_adapters/cwl/biobb_chemistry/test/babelm 2021-10-30T07:59:47,141 copying biobb_adapters/cwl/biobb_chemistry/test/babelm/babel_remove_hydrogens.yml -> build/lib/biobb_adapters/cwl/biobb_chemistry/test/babelm 2021-10-30T07:59:47,148 creating build/lib/biobb_adapters/cwl/biobb_chemistry/test/data 2021-10-30T07:59:47,149 creating build/lib/biobb_adapters/cwl/biobb_chemistry/test/data/acpype 2021-10-30T07:59:47,152 copying biobb_adapters/cwl/biobb_chemistry/test/data/acpype/acpype.params.mol2 -> build/lib/biobb_adapters/cwl/biobb_chemistry/test/data/acpype 2021-10-30T07:59:47,158 copying biobb_adapters/cwl/biobb_chemistry/test/data/acpype/acpype.params.pdb -> build/lib/biobb_adapters/cwl/biobb_chemistry/test/data/acpype 2021-10-30T07:59:47,164 creating build/lib/biobb_adapters/cwl/biobb_chemistry/test/data/ambertools 2021-10-30T07:59:47,166 copying biobb_adapters/cwl/biobb_chemistry/test/data/ambertools/reduce.H.pdb -> build/lib/biobb_adapters/cwl/biobb_chemistry/test/data/ambertools 2021-10-30T07:59:47,172 copying biobb_adapters/cwl/biobb_chemistry/test/data/ambertools/reduce.no.H.pdb -> build/lib/biobb_adapters/cwl/biobb_chemistry/test/data/ambertools 2021-10-30T07:59:47,179 creating build/lib/biobb_adapters/cwl/biobb_chemistry/test/data/babelm 2021-10-30T07:59:47,182 copying biobb_adapters/cwl/biobb_chemistry/test/data/babelm/babel.H.pdb -> build/lib/biobb_adapters/cwl/biobb_chemistry/test/data/babelm 2021-10-30T07:59:47,190 copying biobb_adapters/cwl/biobb_chemistry/test/data/babelm/babel.minimize.pdb -> build/lib/biobb_adapters/cwl/biobb_chemistry/test/data/babelm 2021-10-30T07:59:47,197 copying biobb_adapters/cwl/biobb_chemistry/test/data/babelm/babel.no.H.pdb -> build/lib/biobb_adapters/cwl/biobb_chemistry/test/data/babelm 2021-10-30T07:59:47,204 copying biobb_adapters/cwl/biobb_chemistry/test/data/babelm/babel.smi -> build/lib/biobb_adapters/cwl/biobb_chemistry/test/data/babelm 2021-10-30T07:59:47,211 creating build/lib/biobb_adapters/cwl/biobb_cmip 2021-10-30T07:59:47,213 copying biobb_adapters/cwl/biobb_cmip/cmip.cwl -> build/lib/biobb_adapters/cwl/biobb_cmip 2021-10-30T07:59:47,221 copying biobb_adapters/cwl/biobb_cmip/titration.cwl -> build/lib/biobb_adapters/cwl/biobb_cmip 2021-10-30T07:59:47,228 creating build/lib/biobb_adapters/cwl/biobb_io 2021-10-30T07:59:47,231 copying biobb_adapters/cwl/biobb_io/api_binding_site.cwl -> build/lib/biobb_adapters/cwl/biobb_io 2021-10-30T07:59:47,238 copying biobb_adapters/cwl/biobb_io/binding_site.cwl -> build/lib/biobb_adapters/cwl/biobb_io 2021-10-30T07:59:47,245 copying biobb_adapters/cwl/biobb_io/canonical_fasta.cwl -> build/lib/biobb_adapters/cwl/biobb_io 2021-10-30T07:59:47,252 copying biobb_adapters/cwl/biobb_io/drugbank.cwl -> build/lib/biobb_adapters/cwl/biobb_io 2021-10-30T07:59:47,259 copying biobb_adapters/cwl/biobb_io/ideal_sdf.cwl -> build/lib/biobb_adapters/cwl/biobb_io 2021-10-30T07:59:47,265 copying biobb_adapters/cwl/biobb_io/ligand.cwl -> build/lib/biobb_adapters/cwl/biobb_io 2021-10-30T07:59:47,272 copying biobb_adapters/cwl/biobb_io/memprotmd_sim.cwl -> build/lib/biobb_adapters/cwl/biobb_io 2021-10-30T07:59:47,278 copying biobb_adapters/cwl/biobb_io/memprotmd_sim_list.cwl -> build/lib/biobb_adapters/cwl/biobb_io 2021-10-30T07:59:47,285 copying biobb_adapters/cwl/biobb_io/memprotmd_sim_search.cwl -> build/lib/biobb_adapters/cwl/biobb_io 2021-10-30T07:59:47,292 copying biobb_adapters/cwl/biobb_io/mmcif.cwl -> build/lib/biobb_adapters/cwl/biobb_io 2021-10-30T07:59:47,298 copying biobb_adapters/cwl/biobb_io/pdb.cwl -> build/lib/biobb_adapters/cwl/biobb_io 2021-10-30T07:59:47,305 copying biobb_adapters/cwl/biobb_io/pdb_cluster_zip.cwl -> build/lib/biobb_adapters/cwl/biobb_io 2021-10-30T07:59:47,312 copying biobb_adapters/cwl/biobb_io/pdb_variants.cwl -> build/lib/biobb_adapters/cwl/biobb_io 2021-10-30T07:59:47,318 copying biobb_adapters/cwl/biobb_io/structure_info.cwl -> build/lib/biobb_adapters/cwl/biobb_io 2021-10-30T07:59:47,325 creating build/lib/biobb_adapters/cwl/biobb_io/mmb_api 2021-10-30T07:59:47,327 copying biobb_adapters/cwl/biobb_io/mmb_api/binding_site.cwl -> build/lib/biobb_adapters/cwl/biobb_io/mmb_api 2021-10-30T07:59:47,334 copying biobb_adapters/cwl/biobb_io/mmb_api/canonical_fasta.cwl -> build/lib/biobb_adapters/cwl/biobb_io/mmb_api 2021-10-30T07:59:47,340 copying biobb_adapters/cwl/biobb_io/mmb_api/drugbank.cwl -> build/lib/biobb_adapters/cwl/biobb_io/mmb_api 2021-10-30T07:59:47,344 copying biobb_adapters/cwl/biobb_io/mmb_api/ideal_sdf.cwl -> build/lib/biobb_adapters/cwl/biobb_io/mmb_api 2021-10-30T07:59:47,349 copying biobb_adapters/cwl/biobb_io/mmb_api/ligand.cwl -> build/lib/biobb_adapters/cwl/biobb_io/mmb_api 2021-10-30T07:59:47,354 copying biobb_adapters/cwl/biobb_io/mmb_api/memprotmd_sim.cwl -> build/lib/biobb_adapters/cwl/biobb_io/mmb_api 2021-10-30T07:59:47,360 copying biobb_adapters/cwl/biobb_io/mmb_api/memprotmd_sim_list.cwl -> build/lib/biobb_adapters/cwl/biobb_io/mmb_api 2021-10-30T07:59:47,367 copying biobb_adapters/cwl/biobb_io/mmb_api/memprotmd_sim_search.cwl -> build/lib/biobb_adapters/cwl/biobb_io/mmb_api 2021-10-30T07:59:47,374 copying biobb_adapters/cwl/biobb_io/mmb_api/mmcif.cwl -> build/lib/biobb_adapters/cwl/biobb_io/mmb_api 2021-10-30T07:59:47,380 copying biobb_adapters/cwl/biobb_io/mmb_api/pdb.cwl -> build/lib/biobb_adapters/cwl/biobb_io/mmb_api 2021-10-30T07:59:47,387 copying biobb_adapters/cwl/biobb_io/mmb_api/pdb_cluster_zip.cwl -> build/lib/biobb_adapters/cwl/biobb_io/mmb_api 2021-10-30T07:59:47,394 copying biobb_adapters/cwl/biobb_io/mmb_api/pdb_variants.cwl -> build/lib/biobb_adapters/cwl/biobb_io/mmb_api 2021-10-30T07:59:47,400 copying biobb_adapters/cwl/biobb_io/mmb_api/structure_info.cwl -> build/lib/biobb_adapters/cwl/biobb_io/mmb_api 2021-10-30T07:59:47,407 creating build/lib/biobb_adapters/cwl/biobb_md 2021-10-30T07:59:47,410 copying biobb_adapters/cwl/biobb_md/append_ligand.cwl -> build/lib/biobb_adapters/cwl/biobb_md 2021-10-30T07:59:47,417 copying biobb_adapters/cwl/biobb_md/editconf.cwl -> build/lib/biobb_adapters/cwl/biobb_md 2021-10-30T07:59:47,423 copying biobb_adapters/cwl/biobb_md/genion.cwl -> build/lib/biobb_adapters/cwl/biobb_md 2021-10-30T07:59:47,430 copying biobb_adapters/cwl/biobb_md/genrestr.cwl -> build/lib/biobb_adapters/cwl/biobb_md 2021-10-30T07:59:47,437 copying biobb_adapters/cwl/biobb_md/gmxselect.cwl -> build/lib/biobb_adapters/cwl/biobb_md 2021-10-30T07:59:47,444 copying biobb_adapters/cwl/biobb_md/grompp.cwl -> build/lib/biobb_adapters/cwl/biobb_md 2021-10-30T07:59:47,451 copying biobb_adapters/cwl/biobb_md/grompp_mdrun.cwl -> build/lib/biobb_adapters/cwl/biobb_md 2021-10-30T07:59:47,458 copying biobb_adapters/cwl/biobb_md/make_ndx.cwl -> build/lib/biobb_adapters/cwl/biobb_md 2021-10-30T07:59:47,465 copying biobb_adapters/cwl/biobb_md/mdrun.cwl -> build/lib/biobb_adapters/cwl/biobb_md 2021-10-30T07:59:47,473 copying biobb_adapters/cwl/biobb_md/ndx2resttop.cwl -> build/lib/biobb_adapters/cwl/biobb_md 2021-10-30T07:59:47,480 copying biobb_adapters/cwl/biobb_md/pdb2gmx.cwl -> build/lib/biobb_adapters/cwl/biobb_md 2021-10-30T07:59:47,486 copying biobb_adapters/cwl/biobb_md/solvate.cwl -> build/lib/biobb_adapters/cwl/biobb_md 2021-10-30T07:59:47,493 creating build/lib/biobb_adapters/cwl/biobb_md/gromacs 2021-10-30T07:59:47,495 copying biobb_adapters/cwl/biobb_md/gromacs/editconf.cwl -> build/lib/biobb_adapters/cwl/biobb_md/gromacs 2021-10-30T07:59:47,501 copying biobb_adapters/cwl/biobb_md/gromacs/genion.cwl -> build/lib/biobb_adapters/cwl/biobb_md/gromacs 2021-10-30T07:59:47,506 copying biobb_adapters/cwl/biobb_md/gromacs/genrestr.cwl -> build/lib/biobb_adapters/cwl/biobb_md/gromacs 2021-10-30T07:59:47,511 copying biobb_adapters/cwl/biobb_md/gromacs/grompp.cwl -> build/lib/biobb_adapters/cwl/biobb_md/gromacs 2021-10-30T07:59:47,515 copying biobb_adapters/cwl/biobb_md/gromacs/make_ndx.cwl -> build/lib/biobb_adapters/cwl/biobb_md/gromacs 2021-10-30T07:59:47,520 copying biobb_adapters/cwl/biobb_md/gromacs/mdrun.cwl -> build/lib/biobb_adapters/cwl/biobb_md/gromacs 2021-10-30T07:59:47,527 copying biobb_adapters/cwl/biobb_md/gromacs/pdb2gmx.cwl -> build/lib/biobb_adapters/cwl/biobb_md/gromacs 2021-10-30T07:59:47,533 copying biobb_adapters/cwl/biobb_md/gromacs/solvate.cwl -> build/lib/biobb_adapters/cwl/biobb_md/gromacs 2021-10-30T07:59:47,540 creating build/lib/biobb_adapters/cwl/biobb_md/gromacs_extra 2021-10-30T07:59:47,542 copying biobb_adapters/cwl/biobb_md/gromacs_extra/ndx2resttop.cwl -> build/lib/biobb_adapters/cwl/biobb_md/gromacs_extra 2021-10-30T07:59:47,547 creating build/lib/biobb_adapters/cwl/biobb_md/test 2021-10-30T07:59:47,548 copying biobb_adapters/cwl/biobb_md/test/cwl_unitest.sh -> build/lib/biobb_adapters/cwl/biobb_md/test 2021-10-30T07:59:47,553 creating build/lib/biobb_adapters/cwl/biobb_md/test/data 2021-10-30T07:59:47,554 creating build/lib/biobb_adapters/cwl/biobb_md/test/data/gromacs 2021-10-30T07:59:47,556 copying biobb_adapters/cwl/biobb_md/test/data/gromacs/cluster.gro -> build/lib/biobb_adapters/cwl/biobb_md/test/data/gromacs 2021-10-30T07:59:48,015 copying biobb_adapters/cwl/biobb_md/test/data/gromacs/cluster.trr -> build/lib/biobb_adapters/cwl/biobb_md/test/data/gromacs 2021-10-30T07:59:48,342 copying biobb_adapters/cwl/biobb_md/test/data/gromacs/editconf.gro -> build/lib/biobb_adapters/cwl/biobb_md/test/data/gromacs 2021-10-30T07:59:48,352 copying biobb_adapters/cwl/biobb_md/test/data/gromacs/genion.tpr -> build/lib/biobb_adapters/cwl/biobb_md/test/data/gromacs 2021-10-30T07:59:48,545 copying biobb_adapters/cwl/biobb_md/test/data/gromacs/genion.zip -> build/lib/biobb_adapters/cwl/biobb_md/test/data/gromacs 2021-10-30T07:59:48,587 copying biobb_adapters/cwl/biobb_md/test/data/gromacs/genrestr.gro -> build/lib/biobb_adapters/cwl/biobb_md/test/data/gromacs 2021-10-30T07:59:48,886 copying biobb_adapters/cwl/biobb_md/test/data/gromacs/genrestr.ndx -> build/lib/biobb_adapters/cwl/biobb_md/test/data/gromacs 2021-10-30T07:59:48,976 copying biobb_adapters/cwl/biobb_md/test/data/gromacs/genrestr.zip -> build/lib/biobb_adapters/cwl/biobb_md/test/data/gromacs 2021-10-30T07:59:49,020 copying biobb_adapters/cwl/biobb_md/test/data/gromacs/grompp.gro -> build/lib/biobb_adapters/cwl/biobb_md/test/data/gromacs 2021-10-30T07:59:49,324 copying biobb_adapters/cwl/biobb_md/test/data/gromacs/grompp.zip -> build/lib/biobb_adapters/cwl/biobb_md/test/data/gromacs 2021-10-30T07:59:49,364 copying biobb_adapters/cwl/biobb_md/test/data/gromacs/make_ndx.tpr -> build/lib/biobb_adapters/cwl/biobb_md/test/data/gromacs 2021-10-30T07:59:50,123 copying biobb_adapters/cwl/biobb_md/test/data/gromacs/mdrun.tpr -> build/lib/biobb_adapters/cwl/biobb_md/test/data/gromacs 2021-10-30T07:59:50,315 copying biobb_adapters/cwl/biobb_md/test/data/gromacs/pyruvate_kinase.pdb -> build/lib/biobb_adapters/cwl/biobb_md/test/data/gromacs 2021-10-30T07:59:50,561 copying biobb_adapters/cwl/biobb_md/test/data/gromacs/rms.gro -> build/lib/biobb_adapters/cwl/biobb_md/test/data/gromacs 2021-10-30T07:59:50,870 copying biobb_adapters/cwl/biobb_md/test/data/gromacs/rms.trr -> build/lib/biobb_adapters/cwl/biobb_md/test/data/gromacs 2021-10-30T07:59:51,192 copying biobb_adapters/cwl/biobb_md/test/data/gromacs/solvate.gro -> build/lib/biobb_adapters/cwl/biobb_md/test/data/gromacs 2021-10-30T07:59:51,205 copying biobb_adapters/cwl/biobb_md/test/data/gromacs/solvate.zip -> build/lib/biobb_adapters/cwl/biobb_md/test/data/gromacs 2021-10-30T07:59:51,248 creating build/lib/biobb_adapters/cwl/biobb_md/test/data/gromacs_extra 2021-10-30T07:59:51,251 copying biobb_adapters/cwl/biobb_md/test/data/gromacs_extra/ndx2resttop.ndx -> build/lib/biobb_adapters/cwl/biobb_md/test/data/gromacs_extra 2021-10-30T07:59:52,570 copying biobb_adapters/cwl/biobb_md/test/data/gromacs_extra/ndx2resttop.zip -> build/lib/biobb_adapters/cwl/biobb_md/test/data/gromacs_extra 2021-10-30T07:59:53,458 creating build/lib/biobb_adapters/cwl/biobb_md/test/gromacs 2021-10-30T07:59:53,460 copying biobb_adapters/cwl/biobb_md/test/gromacs/editconf.yml -> build/lib/biobb_adapters/cwl/biobb_md/test/gromacs 2021-10-30T07:59:53,465 copying biobb_adapters/cwl/biobb_md/test/gromacs/genion.yml -> build/lib/biobb_adapters/cwl/biobb_md/test/gromacs 2021-10-30T07:59:53,470 copying biobb_adapters/cwl/biobb_md/test/gromacs/genrestr.yml -> build/lib/biobb_adapters/cwl/biobb_md/test/gromacs 2021-10-30T07:59:53,475 copying biobb_adapters/cwl/biobb_md/test/gromacs/grompp.yml -> build/lib/biobb_adapters/cwl/biobb_md/test/gromacs 2021-10-30T07:59:53,480 copying biobb_adapters/cwl/biobb_md/test/gromacs/make_ndx.yml -> build/lib/biobb_adapters/cwl/biobb_md/test/gromacs 2021-10-30T07:59:53,487 copying biobb_adapters/cwl/biobb_md/test/gromacs/mdrun.yml -> build/lib/biobb_adapters/cwl/biobb_md/test/gromacs 2021-10-30T07:59:53,494 copying biobb_adapters/cwl/biobb_md/test/gromacs/pdb2gmx.yml -> build/lib/biobb_adapters/cwl/biobb_md/test/gromacs 2021-10-30T07:59:53,501 copying biobb_adapters/cwl/biobb_md/test/gromacs/solvate.yml -> build/lib/biobb_adapters/cwl/biobb_md/test/gromacs 2021-10-30T07:59:53,507 creating build/lib/biobb_adapters/cwl/biobb_md/test/gromacs_extra 2021-10-30T07:59:53,510 copying biobb_adapters/cwl/biobb_md/test/gromacs_extra/ndx2resttop.yml -> build/lib/biobb_adapters/cwl/biobb_md/test/gromacs_extra 2021-10-30T07:59:53,517 creating build/lib/biobb_adapters/cwl/biobb_ml 2021-10-30T07:59:53,520 copying biobb_adapters/cwl/biobb_ml/agglomerative_clustering.cwl -> build/lib/biobb_adapters/cwl/biobb_ml 2021-10-30T07:59:53,525 copying biobb_adapters/cwl/biobb_ml/agglomerative_coefficient.cwl -> build/lib/biobb_adapters/cwl/biobb_ml 2021-10-30T07:59:53,530 copying biobb_adapters/cwl/biobb_ml/autoencoder_neural_network.cwl -> build/lib/biobb_adapters/cwl/biobb_ml 2021-10-30T07:59:53,536 copying biobb_adapters/cwl/biobb_ml/classification_neural_network.cwl -> build/lib/biobb_adapters/cwl/biobb_ml 2021-10-30T07:59:53,543 copying biobb_adapters/cwl/biobb_ml/classification_predict.cwl -> build/lib/biobb_adapters/cwl/biobb_ml 2021-10-30T07:59:53,550 copying biobb_adapters/cwl/biobb_ml/clustering_predict.cwl -> build/lib/biobb_adapters/cwl/biobb_ml 2021-10-30T07:59:53,557 copying biobb_adapters/cwl/biobb_ml/correlation_matrix.cwl -> build/lib/biobb_adapters/cwl/biobb_ml 2021-10-30T07:59:53,564 copying biobb_adapters/cwl/biobb_ml/dbscan.cwl -> build/lib/biobb_adapters/cwl/biobb_ml 2021-10-30T07:59:53,570 copying biobb_adapters/cwl/biobb_ml/decision_tree.cwl -> build/lib/biobb_adapters/cwl/biobb_ml 2021-10-30T07:59:53,578 copying biobb_adapters/cwl/biobb_ml/dendrogram.cwl -> build/lib/biobb_adapters/cwl/biobb_ml 2021-10-30T07:59:53,585 copying biobb_adapters/cwl/biobb_ml/drop_columns.cwl -> build/lib/biobb_adapters/cwl/biobb_ml 2021-10-30T07:59:53,592 copying biobb_adapters/cwl/biobb_ml/dummy_variables.cwl -> build/lib/biobb_adapters/cwl/biobb_ml 2021-10-30T07:59:53,599 copying biobb_adapters/cwl/biobb_ml/k_means.cwl -> build/lib/biobb_adapters/cwl/biobb_ml 2021-10-30T07:59:53,606 copying biobb_adapters/cwl/biobb_ml/k_means_coefficient.cwl -> build/lib/biobb_adapters/cwl/biobb_ml 2021-10-30T07:59:53,613 copying biobb_adapters/cwl/biobb_ml/k_neighbors.cwl -> build/lib/biobb_adapters/cwl/biobb_ml 2021-10-30T07:59:53,620 copying biobb_adapters/cwl/biobb_ml/k_neighbors_coefficient.cwl -> build/lib/biobb_adapters/cwl/biobb_ml 2021-10-30T07:59:53,627 copying biobb_adapters/cwl/biobb_ml/linear_regression.cwl -> build/lib/biobb_adapters/cwl/biobb_ml 2021-10-30T07:59:53,634 copying biobb_adapters/cwl/biobb_ml/logistic_regression.cwl -> build/lib/biobb_adapters/cwl/biobb_ml 2021-10-30T07:59:53,642 copying biobb_adapters/cwl/biobb_ml/map_variables.cwl -> build/lib/biobb_adapters/cwl/biobb_ml 2021-10-30T07:59:53,649 copying biobb_adapters/cwl/biobb_ml/neural_network_decode.cwl -> build/lib/biobb_adapters/cwl/biobb_ml 2021-10-30T07:59:53,656 copying biobb_adapters/cwl/biobb_ml/neural_network_predict.cwl -> build/lib/biobb_adapters/cwl/biobb_ml 2021-10-30T07:59:53,662 copying biobb_adapters/cwl/biobb_ml/oversampling.cwl -> build/lib/biobb_adapters/cwl/biobb_ml 2021-10-30T07:59:53,669 copying biobb_adapters/cwl/biobb_ml/pairwise_comparison.cwl -> build/lib/biobb_adapters/cwl/biobb_ml 2021-10-30T07:59:53,676 copying biobb_adapters/cwl/biobb_ml/pls_components.cwl -> build/lib/biobb_adapters/cwl/biobb_ml 2021-10-30T07:59:53,683 copying biobb_adapters/cwl/biobb_ml/pls_regression.cwl -> build/lib/biobb_adapters/cwl/biobb_ml 2021-10-30T07:59:53,689 copying biobb_adapters/cwl/biobb_ml/polynomial_regression.cwl -> build/lib/biobb_adapters/cwl/biobb_ml 2021-10-30T07:59:53,696 copying biobb_adapters/cwl/biobb_ml/principal_component.cwl -> build/lib/biobb_adapters/cwl/biobb_ml 2021-10-30T07:59:53,703 copying biobb_adapters/cwl/biobb_ml/random_forest_classifier.cwl -> build/lib/biobb_adapters/cwl/biobb_ml 2021-10-30T07:59:53,710 copying biobb_adapters/cwl/biobb_ml/random_forest_regressor.cwl -> build/lib/biobb_adapters/cwl/biobb_ml 2021-10-30T07:59:53,717 copying biobb_adapters/cwl/biobb_ml/recurrent_neural_network.cwl -> build/lib/biobb_adapters/cwl/biobb_ml 2021-10-30T07:59:53,724 copying biobb_adapters/cwl/biobb_ml/regression_neural_network.cwl -> build/lib/biobb_adapters/cwl/biobb_ml 2021-10-30T07:59:53,731 copying biobb_adapters/cwl/biobb_ml/regression_predict.cwl -> build/lib/biobb_adapters/cwl/biobb_ml 2021-10-30T07:59:53,737 copying biobb_adapters/cwl/biobb_ml/resampling.cwl -> build/lib/biobb_adapters/cwl/biobb_ml 2021-10-30T07:59:53,744 copying biobb_adapters/cwl/biobb_ml/scale_columns.cwl -> build/lib/biobb_adapters/cwl/biobb_ml 2021-10-30T07:59:53,751 copying biobb_adapters/cwl/biobb_ml/spectral_clustering.cwl -> build/lib/biobb_adapters/cwl/biobb_ml 2021-10-30T07:59:53,757 copying biobb_adapters/cwl/biobb_ml/spectral_coefficient.cwl -> build/lib/biobb_adapters/cwl/biobb_ml 2021-10-30T07:59:53,764 copying biobb_adapters/cwl/biobb_ml/support_vector_machine.cwl -> build/lib/biobb_adapters/cwl/biobb_ml 2021-10-30T07:59:53,769 copying biobb_adapters/cwl/biobb_ml/undersampling.cwl -> build/lib/biobb_adapters/cwl/biobb_ml 2021-10-30T07:59:53,774 creating build/lib/biobb_adapters/cwl/biobb_ml/classification 2021-10-30T07:59:53,776 copying biobb_adapters/cwl/biobb_ml/classification/classification_predict.cwl -> build/lib/biobb_adapters/cwl/biobb_ml/classification 2021-10-30T07:59:53,782 copying biobb_adapters/cwl/biobb_ml/classification/decision_tree.cwl -> build/lib/biobb_adapters/cwl/biobb_ml/classification 2021-10-30T07:59:53,789 copying biobb_adapters/cwl/biobb_ml/classification/k_neighbors.cwl -> build/lib/biobb_adapters/cwl/biobb_ml/classification 2021-10-30T07:59:53,796 copying biobb_adapters/cwl/biobb_ml/classification/k_neighbors_coefficient.cwl -> build/lib/biobb_adapters/cwl/biobb_ml/classification 2021-10-30T07:59:53,803 copying biobb_adapters/cwl/biobb_ml/classification/logistic_regression.cwl -> build/lib/biobb_adapters/cwl/biobb_ml/classification 2021-10-30T07:59:53,811 copying biobb_adapters/cwl/biobb_ml/classification/random_forest_classifier.cwl -> build/lib/biobb_adapters/cwl/biobb_ml/classification 2021-10-30T07:59:53,818 copying biobb_adapters/cwl/biobb_ml/classification/support_vector_machine.cwl -> build/lib/biobb_adapters/cwl/biobb_ml/classification 2021-10-30T07:59:53,825 creating build/lib/biobb_adapters/cwl/biobb_ml/clustering 2021-10-30T07:59:53,828 copying biobb_adapters/cwl/biobb_ml/clustering/agglomerative_clustering.cwl -> build/lib/biobb_adapters/cwl/biobb_ml/clustering 2021-10-30T07:59:53,835 copying biobb_adapters/cwl/biobb_ml/clustering/agglomerative_coefficient.cwl -> build/lib/biobb_adapters/cwl/biobb_ml/clustering 2021-10-30T07:59:53,842 copying biobb_adapters/cwl/biobb_ml/clustering/clustering_predict.cwl -> build/lib/biobb_adapters/cwl/biobb_ml/clustering 2021-10-30T07:59:53,848 copying biobb_adapters/cwl/biobb_ml/clustering/dbscan.cwl -> build/lib/biobb_adapters/cwl/biobb_ml/clustering 2021-10-30T07:59:53,853 copying biobb_adapters/cwl/biobb_ml/clustering/k_means.cwl -> build/lib/biobb_adapters/cwl/biobb_ml/clustering 2021-10-30T07:59:53,858 copying biobb_adapters/cwl/biobb_ml/clustering/k_means_coefficient.cwl -> build/lib/biobb_adapters/cwl/biobb_ml/clustering 2021-10-30T07:59:53,863 copying biobb_adapters/cwl/biobb_ml/clustering/spectral_clustering.cwl -> build/lib/biobb_adapters/cwl/biobb_ml/clustering 2021-10-30T07:59:53,871 copying biobb_adapters/cwl/biobb_ml/clustering/spectral_coefficient.cwl -> build/lib/biobb_adapters/cwl/biobb_ml/clustering 2021-10-30T07:59:53,877 creating build/lib/biobb_adapters/cwl/biobb_ml/dimensionality_reduction 2021-10-30T07:59:53,880 copying biobb_adapters/cwl/biobb_ml/dimensionality_reduction/pls_components.cwl -> build/lib/biobb_adapters/cwl/biobb_ml/dimensionality_reduction 2021-10-30T07:59:53,888 copying biobb_adapters/cwl/biobb_ml/dimensionality_reduction/pls_regression.cwl -> build/lib/biobb_adapters/cwl/biobb_ml/dimensionality_reduction 2021-10-30T07:59:53,895 copying biobb_adapters/cwl/biobb_ml/dimensionality_reduction/principal_component.cwl -> build/lib/biobb_adapters/cwl/biobb_ml/dimensionality_reduction 2021-10-30T07:59:53,901 creating build/lib/biobb_adapters/cwl/biobb_ml/neural_networks 2021-10-30T07:59:53,904 copying biobb_adapters/cwl/biobb_ml/neural_networks/autoencoder_neural_network.cwl -> build/lib/biobb_adapters/cwl/biobb_ml/neural_networks 2021-10-30T07:59:53,913 copying biobb_adapters/cwl/biobb_ml/neural_networks/classification_neural_network.cwl -> build/lib/biobb_adapters/cwl/biobb_ml/neural_networks 2021-10-30T07:59:53,920 copying biobb_adapters/cwl/biobb_ml/neural_networks/neural_network_decode.cwl -> build/lib/biobb_adapters/cwl/biobb_ml/neural_networks 2021-10-30T07:59:53,927 copying biobb_adapters/cwl/biobb_ml/neural_networks/neural_network_predict.cwl -> build/lib/biobb_adapters/cwl/biobb_ml/neural_networks 2021-10-30T07:59:53,935 copying biobb_adapters/cwl/biobb_ml/neural_networks/recurrent_neural_network.cwl -> build/lib/biobb_adapters/cwl/biobb_ml/neural_networks 2021-10-30T07:59:53,942 copying biobb_adapters/cwl/biobb_ml/neural_networks/regression_neural_network.cwl -> build/lib/biobb_adapters/cwl/biobb_ml/neural_networks 2021-10-30T07:59:53,949 creating build/lib/biobb_adapters/cwl/biobb_ml/regression 2021-10-30T07:59:53,952 copying biobb_adapters/cwl/biobb_ml/regression/linear_regression.cwl -> build/lib/biobb_adapters/cwl/biobb_ml/regression 2021-10-30T07:59:53,959 copying biobb_adapters/cwl/biobb_ml/regression/polynomial_regression.cwl -> build/lib/biobb_adapters/cwl/biobb_ml/regression 2021-10-30T07:59:53,966 copying biobb_adapters/cwl/biobb_ml/regression/random_forest_regressor.cwl -> build/lib/biobb_adapters/cwl/biobb_ml/regression 2021-10-30T07:59:53,974 copying biobb_adapters/cwl/biobb_ml/regression/regression_predict.cwl -> build/lib/biobb_adapters/cwl/biobb_ml/regression 2021-10-30T07:59:53,980 creating build/lib/biobb_adapters/cwl/biobb_ml/resampling 2021-10-30T07:59:53,983 copying biobb_adapters/cwl/biobb_ml/resampling/oversampling.cwl -> build/lib/biobb_adapters/cwl/biobb_ml/resampling 2021-10-30T07:59:53,990 copying biobb_adapters/cwl/biobb_ml/resampling/resampling.cwl -> build/lib/biobb_adapters/cwl/biobb_ml/resampling 2021-10-30T07:59:53,997 copying biobb_adapters/cwl/biobb_ml/resampling/undersampling.cwl -> build/lib/biobb_adapters/cwl/biobb_ml/resampling 2021-10-30T07:59:54,004 creating build/lib/biobb_adapters/cwl/biobb_ml/utils 2021-10-30T07:59:54,007 copying biobb_adapters/cwl/biobb_ml/utils/correlation_matrix.cwl -> build/lib/biobb_adapters/cwl/biobb_ml/utils 2021-10-30T07:59:54,014 copying biobb_adapters/cwl/biobb_ml/utils/dendrogram.cwl -> build/lib/biobb_adapters/cwl/biobb_ml/utils 2021-10-30T07:59:54,021 copying biobb_adapters/cwl/biobb_ml/utils/drop_columns.cwl -> build/lib/biobb_adapters/cwl/biobb_ml/utils 2021-10-30T07:59:54,028 copying biobb_adapters/cwl/biobb_ml/utils/dummy_variables.cwl -> build/lib/biobb_adapters/cwl/biobb_ml/utils 2021-10-30T07:59:54,036 copying biobb_adapters/cwl/biobb_ml/utils/map_variables.cwl -> build/lib/biobb_adapters/cwl/biobb_ml/utils 2021-10-30T07:59:54,043 copying biobb_adapters/cwl/biobb_ml/utils/pairwise_comparison.cwl -> build/lib/biobb_adapters/cwl/biobb_ml/utils 2021-10-30T07:59:54,050 copying biobb_adapters/cwl/biobb_ml/utils/scale_columns.cwl -> build/lib/biobb_adapters/cwl/biobb_ml/utils 2021-10-30T07:59:54,056 creating build/lib/biobb_adapters/cwl/biobb_model 2021-10-30T07:59:54,059 copying biobb_adapters/cwl/biobb_model/checking_log.cwl -> build/lib/biobb_adapters/cwl/biobb_model 2021-10-30T07:59:54,066 copying biobb_adapters/cwl/biobb_model/fix_amides.cwl -> build/lib/biobb_adapters/cwl/biobb_model 2021-10-30T07:59:54,073 copying biobb_adapters/cwl/biobb_model/fix_backbone.cwl -> build/lib/biobb_adapters/cwl/biobb_model 2021-10-30T07:59:54,080 copying biobb_adapters/cwl/biobb_model/fix_chirality.cwl -> build/lib/biobb_adapters/cwl/biobb_model 2021-10-30T07:59:54,087 copying biobb_adapters/cwl/biobb_model/fix_side_chain.cwl -> build/lib/biobb_adapters/cwl/biobb_model 2021-10-30T07:59:54,094 copying biobb_adapters/cwl/biobb_model/mutate.cwl -> build/lib/biobb_adapters/cwl/biobb_model 2021-10-30T07:59:54,100 creating build/lib/biobb_adapters/cwl/biobb_model/model 2021-10-30T07:59:54,103 copying biobb_adapters/cwl/biobb_model/model/checking_log.cwl -> build/lib/biobb_adapters/cwl/biobb_model/model 2021-10-30T07:59:54,110 copying biobb_adapters/cwl/biobb_model/model/fix_amides.cwl -> build/lib/biobb_adapters/cwl/biobb_model/model 2021-10-30T07:59:54,117 copying biobb_adapters/cwl/biobb_model/model/fix_backbone.cwl -> build/lib/biobb_adapters/cwl/biobb_model/model 2021-10-30T07:59:54,124 copying biobb_adapters/cwl/biobb_model/model/fix_chirality.cwl -> build/lib/biobb_adapters/cwl/biobb_model/model 2021-10-30T07:59:54,131 copying biobb_adapters/cwl/biobb_model/model/fix_side_chain.cwl -> build/lib/biobb_adapters/cwl/biobb_model/model 2021-10-30T07:59:54,138 copying biobb_adapters/cwl/biobb_model/model/mutate.cwl -> build/lib/biobb_adapters/cwl/biobb_model/model 2021-10-30T07:59:54,144 creating build/lib/biobb_adapters/cwl/biobb_model/test 2021-10-30T07:59:54,147 copying biobb_adapters/cwl/biobb_model/test/cwl_unitest.sh -> build/lib/biobb_adapters/cwl/biobb_model/test 2021-10-30T07:59:54,154 creating build/lib/biobb_adapters/cwl/biobb_model/test/data 2021-10-30T07:59:54,155 creating build/lib/biobb_adapters/cwl/biobb_model/test/data/model 2021-10-30T07:59:54,159 copying biobb_adapters/cwl/biobb_model/test/data/model/2ki5.pdb -> build/lib/biobb_adapters/cwl/biobb_model/test/data/model 2021-10-30T07:59:54,210 creating build/lib/biobb_adapters/cwl/biobb_model/test/model 2021-10-30T07:59:54,213 copying biobb_adapters/cwl/biobb_model/test/model/fix_side_chain.yml -> build/lib/biobb_adapters/cwl/biobb_model/test/model 2021-10-30T07:59:54,220 copying biobb_adapters/cwl/biobb_model/test/model/mutate.yml -> build/lib/biobb_adapters/cwl/biobb_model/test/model 2021-10-30T07:59:54,226 creating build/lib/biobb_adapters/cwl/biobb_pmx 2021-10-30T07:59:54,229 copying biobb_adapters/cwl/biobb_pmx/pmxanalyse.cwl -> build/lib/biobb_adapters/cwl/biobb_pmx 2021-10-30T07:59:54,235 copying biobb_adapters/cwl/biobb_pmx/pmxgentop.cwl -> build/lib/biobb_adapters/cwl/biobb_pmx 2021-10-30T07:59:54,240 copying biobb_adapters/cwl/biobb_pmx/pmxmutate.cwl -> build/lib/biobb_adapters/cwl/biobb_pmx 2021-10-30T07:59:54,245 creating build/lib/biobb_adapters/cwl/biobb_pmx/pmx 2021-10-30T07:59:54,247 copying biobb_adapters/cwl/biobb_pmx/pmx/pmxanalyse.cwl -> build/lib/biobb_adapters/cwl/biobb_pmx/pmx 2021-10-30T07:59:54,253 copying biobb_adapters/cwl/biobb_pmx/pmx/pmxgentop.cwl -> build/lib/biobb_adapters/cwl/biobb_pmx/pmx 2021-10-30T07:59:54,260 copying biobb_adapters/cwl/biobb_pmx/pmx/pmxmutate.cwl -> build/lib/biobb_adapters/cwl/biobb_pmx/pmx 2021-10-30T07:59:54,267 creating build/lib/biobb_adapters/cwl/biobb_structure_utils 2021-10-30T07:59:54,269 copying biobb_adapters/cwl/biobb_structure_utils/cat_pdb.cwl -> build/lib/biobb_adapters/cwl/biobb_structure_utils 2021-10-30T07:59:54,277 copying biobb_adapters/cwl/biobb_structure_utils/extract_atoms.cwl -> build/lib/biobb_adapters/cwl/biobb_structure_utils 2021-10-30T07:59:54,284 copying biobb_adapters/cwl/biobb_structure_utils/extract_chain.cwl -> build/lib/biobb_adapters/cwl/biobb_structure_utils 2021-10-30T07:59:54,291 copying biobb_adapters/cwl/biobb_structure_utils/extract_heteroatoms.cwl -> build/lib/biobb_adapters/cwl/biobb_structure_utils 2021-10-30T07:59:54,298 copying biobb_adapters/cwl/biobb_structure_utils/extract_model.cwl -> build/lib/biobb_adapters/cwl/biobb_structure_utils 2021-10-30T07:59:54,305 copying biobb_adapters/cwl/biobb_structure_utils/extract_molecule.cwl -> build/lib/biobb_adapters/cwl/biobb_structure_utils 2021-10-30T07:59:54,312 copying biobb_adapters/cwl/biobb_structure_utils/extract_protein.cwl -> build/lib/biobb_adapters/cwl/biobb_structure_utils 2021-10-30T07:59:54,320 copying biobb_adapters/cwl/biobb_structure_utils/remove_ligand.cwl -> build/lib/biobb_adapters/cwl/biobb_structure_utils 2021-10-30T07:59:54,327 copying biobb_adapters/cwl/biobb_structure_utils/remove_pdb_water.cwl -> build/lib/biobb_adapters/cwl/biobb_structure_utils 2021-10-30T07:59:54,334 copying biobb_adapters/cwl/biobb_structure_utils/renumber_structure.cwl -> build/lib/biobb_adapters/cwl/biobb_structure_utils 2021-10-30T07:59:54,341 copying biobb_adapters/cwl/biobb_structure_utils/sort_gro_residues.cwl -> build/lib/biobb_adapters/cwl/biobb_structure_utils 2021-10-30T07:59:54,348 copying biobb_adapters/cwl/biobb_structure_utils/str_check_add_hydrogens.cwl -> build/lib/biobb_adapters/cwl/biobb_structure_utils 2021-10-30T07:59:54,355 copying biobb_adapters/cwl/biobb_structure_utils/structure_check.cwl -> build/lib/biobb_adapters/cwl/biobb_structure_utils 2021-10-30T07:59:54,361 creating build/lib/biobb_adapters/cwl/biobb_structure_utils/test 2021-10-30T07:59:54,364 copying biobb_adapters/cwl/biobb_structure_utils/test/cwl_unitest.sh -> build/lib/biobb_adapters/cwl/biobb_structure_utils/test 2021-10-30T07:59:54,371 creating build/lib/biobb_adapters/cwl/biobb_structure_utils/test/data 2021-10-30T07:59:54,374 copying biobb_adapters/cwl/biobb_structure_utils/test/data/2vgb.pdb -> build/lib/biobb_adapters/cwl/biobb_structure_utils/test/data 2021-10-30T07:59:54,514 copying biobb_adapters/cwl/biobb_structure_utils/test/data/G2S_stateA_frame92.sorted.gro -> build/lib/biobb_adapters/cwl/biobb_structure_utils/test/data 2021-10-30T07:59:54,866 copying biobb_adapters/cwl/biobb_structure_utils/test/data/WT_aq4_md_1.gro -> build/lib/biobb_adapters/cwl/biobb_structure_utils/test/data 2021-10-30T07:59:55,225 copying biobb_adapters/cwl/biobb_structure_utils/test/data/WT_aq4_md_1.pdb -> build/lib/biobb_adapters/cwl/biobb_structure_utils/test/data 2021-10-30T07:59:55,640 copying biobb_adapters/cwl/biobb_structure_utils/test/data/WT_aq4_md_WAT.pdb -> build/lib/biobb_adapters/cwl/biobb_structure_utils/test/data 2021-10-30T07:59:55,683 copying biobb_adapters/cwl/biobb_structure_utils/test/data/cat_ligand.pdb -> build/lib/biobb_adapters/cwl/biobb_structure_utils/test/data 2021-10-30T07:59:55,690 copying biobb_adapters/cwl/biobb_structure_utils/test/data/cat_protein.pdb -> build/lib/biobb_adapters/cwl/biobb_structure_utils/test/data 2021-10-30T07:59:55,712 copying biobb_adapters/cwl/biobb_structure_utils/test/data/cl3.noH.pdb -> build/lib/biobb_adapters/cwl/biobb_structure_utils/test/data 2021-10-30T07:59:55,717 copying biobb_adapters/cwl/biobb_structure_utils/test/data/extract_chain.pdb -> build/lib/biobb_adapters/cwl/biobb_structure_utils/test/data 2021-10-30T07:59:55,836 copying biobb_adapters/cwl/biobb_structure_utils/test/data/extract_heteroatom.pdb -> build/lib/biobb_adapters/cwl/biobb_structure_utils/test/data 2021-10-30T07:59:56,201 copying biobb_adapters/cwl/biobb_structure_utils/test/data/extract_model.pdb -> build/lib/biobb_adapters/cwl/biobb_structure_utils/test/data 2021-10-30T07:59:56,571 copying biobb_adapters/cwl/biobb_structure_utils/test/data/extract_protein.pdb -> build/lib/biobb_adapters/cwl/biobb_structure_utils/test/data 2021-10-30T07:59:56,598 copying biobb_adapters/cwl/biobb_structure_utils/test/data/pyruvate.gro -> build/lib/biobb_adapters/cwl/biobb_structure_utils/test/data 2021-10-30T07:59:56,661 copying biobb_adapters/cwl/biobb_structure_utils/test/data/smallgro.gro -> build/lib/biobb_adapters/cwl/biobb_structure_utils/test/data 2021-10-30T07:59:56,668 creating build/lib/biobb_adapters/cwl/biobb_structure_utils/test/utils 2021-10-30T07:59:56,670 copying biobb_adapters/cwl/biobb_structure_utils/test/utils/cat_pdb.yml -> build/lib/biobb_adapters/cwl/biobb_structure_utils/test/utils 2021-10-30T07:59:56,678 copying biobb_adapters/cwl/biobb_structure_utils/test/utils/extract_atoms.yml -> build/lib/biobb_adapters/cwl/biobb_structure_utils/test/utils 2021-10-30T07:59:56,685 copying biobb_adapters/cwl/biobb_structure_utils/test/utils/extract_chain.yml -> build/lib/biobb_adapters/cwl/biobb_structure_utils/test/utils 2021-10-30T07:59:56,692 copying biobb_adapters/cwl/biobb_structure_utils/test/utils/extract_heteroatoms.yml -> build/lib/biobb_adapters/cwl/biobb_structure_utils/test/utils 2021-10-30T07:59:56,698 copying biobb_adapters/cwl/biobb_structure_utils/test/utils/extract_model.yml -> build/lib/biobb_adapters/cwl/biobb_structure_utils/test/utils 2021-10-30T07:59:56,705 copying biobb_adapters/cwl/biobb_structure_utils/test/utils/extract_protein.yml -> build/lib/biobb_adapters/cwl/biobb_structure_utils/test/utils 2021-10-30T07:59:56,712 copying biobb_adapters/cwl/biobb_structure_utils/test/utils/remove_ligand.yml -> build/lib/biobb_adapters/cwl/biobb_structure_utils/test/utils 2021-10-30T07:59:56,719 copying biobb_adapters/cwl/biobb_structure_utils/test/utils/remove_pdb_water.yml -> build/lib/biobb_adapters/cwl/biobb_structure_utils/test/utils 2021-10-30T07:59:56,726 copying biobb_adapters/cwl/biobb_structure_utils/test/utils/renumber_structure.yml -> build/lib/biobb_adapters/cwl/biobb_structure_utils/test/utils 2021-10-30T07:59:56,733 copying biobb_adapters/cwl/biobb_structure_utils/test/utils/sort_gro_residues.yml -> build/lib/biobb_adapters/cwl/biobb_structure_utils/test/utils 2021-10-30T07:59:56,739 creating build/lib/biobb_adapters/cwl/biobb_structure_utils/utils 2021-10-30T07:59:56,742 copying biobb_adapters/cwl/biobb_structure_utils/utils/cat_pdb.cwl -> build/lib/biobb_adapters/cwl/biobb_structure_utils/utils 2021-10-30T07:59:56,749 copying biobb_adapters/cwl/biobb_structure_utils/utils/extract_atoms.cwl -> build/lib/biobb_adapters/cwl/biobb_structure_utils/utils 2021-10-30T07:59:56,756 copying biobb_adapters/cwl/biobb_structure_utils/utils/extract_chain.cwl -> build/lib/biobb_adapters/cwl/biobb_structure_utils/utils 2021-10-30T07:59:56,763 copying biobb_adapters/cwl/biobb_structure_utils/utils/extract_heteroatoms.cwl -> build/lib/biobb_adapters/cwl/biobb_structure_utils/utils 2021-10-30T07:59:56,770 copying biobb_adapters/cwl/biobb_structure_utils/utils/extract_model.cwl -> build/lib/biobb_adapters/cwl/biobb_structure_utils/utils 2021-10-30T07:59:56,777 copying biobb_adapters/cwl/biobb_structure_utils/utils/extract_protein.cwl -> build/lib/biobb_adapters/cwl/biobb_structure_utils/utils 2021-10-30T07:59:56,784 copying biobb_adapters/cwl/biobb_structure_utils/utils/remove_ligand.cwl -> build/lib/biobb_adapters/cwl/biobb_structure_utils/utils 2021-10-30T07:59:56,791 copying biobb_adapters/cwl/biobb_structure_utils/utils/remove_pdb_water.cwl -> build/lib/biobb_adapters/cwl/biobb_structure_utils/utils 2021-10-30T07:59:56,798 copying biobb_adapters/cwl/biobb_structure_utils/utils/renumber_structure.cwl -> build/lib/biobb_adapters/cwl/biobb_structure_utils/utils 2021-10-30T07:59:56,805 copying biobb_adapters/cwl/biobb_structure_utils/utils/sort_gro_residues.cwl -> build/lib/biobb_adapters/cwl/biobb_structure_utils/utils 2021-10-30T07:59:56,812 copying biobb_adapters/cwl/biobb_structure_utils/utils/str_check_add_hydrogens.cwl -> build/lib/biobb_adapters/cwl/biobb_structure_utils/utils 2021-10-30T07:59:56,819 copying biobb_adapters/cwl/biobb_structure_utils/utils/structure_check.cwl -> build/lib/biobb_adapters/cwl/biobb_structure_utils/utils 2021-10-30T07:59:56,826 creating build/lib/biobb_adapters/cwl/biobb_vs 2021-10-30T07:59:56,828 copying biobb_adapters/cwl/biobb_vs/autodock_vina.cwl -> build/lib/biobb_adapters/cwl/biobb_vs 2021-10-30T07:59:56,836 copying biobb_adapters/cwl/biobb_vs/autodock_vina_run.cwl -> build/lib/biobb_adapters/cwl/biobb_vs 2021-10-30T07:59:56,843 copying biobb_adapters/cwl/biobb_vs/bindingsite.cwl -> build/lib/biobb_adapters/cwl/biobb_vs 2021-10-30T07:59:56,850 copying biobb_adapters/cwl/biobb_vs/box.cwl -> build/lib/biobb_adapters/cwl/biobb_vs 2021-10-30T07:59:56,856 copying biobb_adapters/cwl/biobb_vs/box_residues.cwl -> build/lib/biobb_adapters/cwl/biobb_vs 2021-10-30T07:59:56,863 copying biobb_adapters/cwl/biobb_vs/extract_model_pdbqt.cwl -> build/lib/biobb_adapters/cwl/biobb_vs 2021-10-30T07:59:56,870 copying biobb_adapters/cwl/biobb_vs/fpocket.cwl -> build/lib/biobb_adapters/cwl/biobb_vs 2021-10-30T07:59:56,877 copying biobb_adapters/cwl/biobb_vs/fpocket_filter.cwl -> build/lib/biobb_adapters/cwl/biobb_vs 2021-10-30T07:59:56,884 copying biobb_adapters/cwl/biobb_vs/fpocket_run.cwl -> build/lib/biobb_adapters/cwl/biobb_vs 2021-10-30T07:59:56,890 copying biobb_adapters/cwl/biobb_vs/fpocket_select.cwl -> build/lib/biobb_adapters/cwl/biobb_vs 2021-10-30T07:59:56,897 creating build/lib/biobb_adapters/cwl/biobb_vs/fpocket 2021-10-30T07:59:56,900 copying biobb_adapters/cwl/biobb_vs/fpocket/fpocket.cwl -> build/lib/biobb_adapters/cwl/biobb_vs/fpocket 2021-10-30T07:59:56,906 copying biobb_adapters/cwl/biobb_vs/fpocket/fpocket_filter.cwl -> build/lib/biobb_adapters/cwl/biobb_vs/fpocket 2021-10-30T07:59:56,911 copying biobb_adapters/cwl/biobb_vs/fpocket/fpocket_select.cwl -> build/lib/biobb_adapters/cwl/biobb_vs/fpocket 2021-10-30T07:59:56,916 creating build/lib/biobb_adapters/cwl/biobb_vs/utils 2021-10-30T07:59:56,918 copying biobb_adapters/cwl/biobb_vs/utils/bindingsite.cwl -> build/lib/biobb_adapters/cwl/biobb_vs/utils 2021-10-30T07:59:56,923 copying biobb_adapters/cwl/biobb_vs/utils/box.cwl -> build/lib/biobb_adapters/cwl/biobb_vs/utils 2021-10-30T07:59:56,930 copying biobb_adapters/cwl/biobb_vs/utils/box_residues.cwl -> build/lib/biobb_adapters/cwl/biobb_vs/utils 2021-10-30T07:59:56,937 copying biobb_adapters/cwl/biobb_vs/utils/extract_model_pdbqt.cwl -> build/lib/biobb_adapters/cwl/biobb_vs/utils 2021-10-30T07:59:56,944 creating build/lib/biobb_adapters/cwl/biobb_vs/vina 2021-10-30T07:59:56,946 copying biobb_adapters/cwl/biobb_vs/vina/autodock_vina.cwl -> build/lib/biobb_adapters/cwl/biobb_vs/vina 2021-10-30T07:59:57,035 installing to build/bdist.linux-armv7l/wheel 2021-10-30T07:59:57,035 running install 2021-10-30T07:59:57,037 running install_lib 2021-10-30T07:59:57,045 creating build/bdist.linux-armv7l 2021-10-30T07:59:57,046 creating build/bdist.linux-armv7l/wheel 2021-10-30T07:59:57,049 creating build/bdist.linux-armv7l/wheel/biobb_adapters 2021-10-30T07:59:57,053 creating build/bdist.linux-armv7l/wheel/biobb_adapters/cwl 2021-10-30T07:59:57,056 creating build/bdist.linux-armv7l/wheel/biobb_adapters/cwl/biobb_cmip 2021-10-30T07:59:57,058 copying build/lib/biobb_adapters/cwl/biobb_cmip/titration.cwl -> build/bdist.linux-armv7l/wheel/biobb_adapters/cwl/biobb_cmip 2021-10-30T07:59:57,063 copying build/lib/biobb_adapters/cwl/biobb_cmip/cmip.cwl -> build/bdist.linux-armv7l/wheel/biobb_adapters/cwl/biobb_cmip 2021-10-30T07:59:57,070 creating build/bdist.linux-armv7l/wheel/biobb_adapters/cwl/biobb_io 2021-10-30T07:59:57,072 copying build/lib/biobb_adapters/cwl/biobb_io/api_binding_site.cwl -> build/bdist.linux-armv7l/wheel/biobb_adapters/cwl/biobb_io 2021-10-30T07:59:57,078 copying build/lib/biobb_adapters/cwl/biobb_io/memprotmd_sim.cwl -> build/bdist.linux-armv7l/wheel/biobb_adapters/cwl/biobb_io 2021-10-30T07:59:57,084 copying build/lib/biobb_adapters/cwl/biobb_io/drugbank.cwl -> build/bdist.linux-armv7l/wheel/biobb_adapters/cwl/biobb_io 2021-10-30T07:59:57,090 copying build/lib/biobb_adapters/cwl/biobb_io/binding_site.cwl -> build/bdist.linux-armv7l/wheel/biobb_adapters/cwl/biobb_io 2021-10-30T07:59:57,095 copying build/lib/biobb_adapters/cwl/biobb_io/pdb_cluster_zip.cwl -> build/bdist.linux-armv7l/wheel/biobb_adapters/cwl/biobb_io 2021-10-30T07:59:57,101 copying build/lib/biobb_adapters/cwl/biobb_io/structure_info.cwl -> build/bdist.linux-armv7l/wheel/biobb_adapters/cwl/biobb_io 2021-10-30T07:59:57,107 copying build/lib/biobb_adapters/cwl/biobb_io/pdb_variants.cwl -> build/bdist.linux-armv7l/wheel/biobb_adapters/cwl/biobb_io 2021-10-30T07:59:57,112 copying build/lib/biobb_adapters/cwl/biobb_io/memprotmd_sim_search.cwl -> build/bdist.linux-armv7l/wheel/biobb_adapters/cwl/biobb_io 2021-10-30T07:59:57,120 creating build/bdist.linux-armv7l/wheel/biobb_adapters/cwl/biobb_io/mmb_api 2021-10-30T07:59:57,122 copying build/lib/biobb_adapters/cwl/biobb_io/mmb_api/memprotmd_sim.cwl -> build/bdist.linux-armv7l/wheel/biobb_adapters/cwl/biobb_io/mmb_api 2021-10-30T07:59:57,128 copying build/lib/biobb_adapters/cwl/biobb_io/mmb_api/drugbank.cwl -> build/bdist.linux-armv7l/wheel/biobb_adapters/cwl/biobb_io/mmb_api 2021-10-30T07:59:57,134 copying build/lib/biobb_adapters/cwl/biobb_io/mmb_api/binding_site.cwl -> build/bdist.linux-armv7l/wheel/biobb_adapters/cwl/biobb_io/mmb_api 2021-10-30T07:59:57,140 copying build/lib/biobb_adapters/cwl/biobb_io/mmb_api/pdb_cluster_zip.cwl -> build/bdist.linux-armv7l/wheel/biobb_adapters/cwl/biobb_io/mmb_api 2021-10-30T07:59:57,146 copying build/lib/biobb_adapters/cwl/biobb_io/mmb_api/structure_info.cwl -> build/bdist.linux-armv7l/wheel/biobb_adapters/cwl/biobb_io/mmb_api 2021-10-30T07:59:57,151 copying build/lib/biobb_adapters/cwl/biobb_io/mmb_api/pdb_variants.cwl -> build/bdist.linux-armv7l/wheel/biobb_adapters/cwl/biobb_io/mmb_api 2021-10-30T07:59:57,157 copying build/lib/biobb_adapters/cwl/biobb_io/mmb_api/memprotmd_sim_search.cwl -> build/bdist.linux-armv7l/wheel/biobb_adapters/cwl/biobb_io/mmb_api 2021-10-30T07:59:57,163 copying build/lib/biobb_adapters/cwl/biobb_io/mmb_api/canonical_fasta.cwl -> build/bdist.linux-armv7l/wheel/biobb_adapters/cwl/biobb_io/mmb_api 2021-10-30T07:59:57,168 copying build/lib/biobb_adapters/cwl/biobb_io/mmb_api/pdb.cwl -> build/bdist.linux-armv7l/wheel/biobb_adapters/cwl/biobb_io/mmb_api 2021-10-30T07:59:57,174 copying build/lib/biobb_adapters/cwl/biobb_io/mmb_api/memprotmd_sim_list.cwl -> build/bdist.linux-armv7l/wheel/biobb_adapters/cwl/biobb_io/mmb_api 2021-10-30T07:59:57,179 copying build/lib/biobb_adapters/cwl/biobb_io/mmb_api/ligand.cwl -> build/bdist.linux-armv7l/wheel/biobb_adapters/cwl/biobb_io/mmb_api 2021-10-30T07:59:57,185 copying build/lib/biobb_adapters/cwl/biobb_io/mmb_api/mmcif.cwl -> build/bdist.linux-armv7l/wheel/biobb_adapters/cwl/biobb_io/mmb_api 2021-10-30T07:59:57,191 copying build/lib/biobb_adapters/cwl/biobb_io/mmb_api/ideal_sdf.cwl -> build/bdist.linux-armv7l/wheel/biobb_adapters/cwl/biobb_io/mmb_api 2021-10-30T07:59:57,197 copying build/lib/biobb_adapters/cwl/biobb_io/canonical_fasta.cwl -> build/bdist.linux-armv7l/wheel/biobb_adapters/cwl/biobb_io 2021-10-30T07:59:57,202 copying build/lib/biobb_adapters/cwl/biobb_io/pdb.cwl -> build/bdist.linux-armv7l/wheel/biobb_adapters/cwl/biobb_io 2021-10-30T07:59:57,208 copying build/lib/biobb_adapters/cwl/biobb_io/memprotmd_sim_list.cwl -> build/bdist.linux-armv7l/wheel/biobb_adapters/cwl/biobb_io 2021-10-30T07:59:57,214 copying build/lib/biobb_adapters/cwl/biobb_io/ligand.cwl -> build/bdist.linux-armv7l/wheel/biobb_adapters/cwl/biobb_io 2021-10-30T07:59:57,219 copying build/lib/biobb_adapters/cwl/biobb_io/mmcif.cwl -> build/bdist.linux-armv7l/wheel/biobb_adapters/cwl/biobb_io 2021-10-30T07:59:57,225 copying build/lib/biobb_adapters/cwl/biobb_io/ideal_sdf.cwl -> build/bdist.linux-armv7l/wheel/biobb_adapters/cwl/biobb_io 2021-10-30T07:59:57,232 creating build/bdist.linux-armv7l/wheel/biobb_adapters/cwl/biobb_vs 2021-10-30T07:59:57,235 copying build/lib/biobb_adapters/cwl/biobb_vs/extract_model_pdbqt.cwl -> build/bdist.linux-armv7l/wheel/biobb_adapters/cwl/biobb_vs 2021-10-30T07:59:57,241 copying build/lib/biobb_adapters/cwl/biobb_vs/bindingsite.cwl -> build/bdist.linux-armv7l/wheel/biobb_adapters/cwl/biobb_vs 2021-10-30T07:59:57,248 creating build/bdist.linux-armv7l/wheel/biobb_adapters/cwl/biobb_vs/utils 2021-10-30T07:59:57,251 copying build/lib/biobb_adapters/cwl/biobb_vs/utils/extract_model_pdbqt.cwl -> build/bdist.linux-armv7l/wheel/biobb_adapters/cwl/biobb_vs/utils 2021-10-30T07:59:57,257 copying build/lib/biobb_adapters/cwl/biobb_vs/utils/bindingsite.cwl -> build/bdist.linux-armv7l/wheel/biobb_adapters/cwl/biobb_vs/utils 2021-10-30T07:59:57,263 copying build/lib/biobb_adapters/cwl/biobb_vs/utils/box.cwl -> build/bdist.linux-armv7l/wheel/biobb_adapters/cwl/biobb_vs/utils 2021-10-30T07:59:57,268 copying build/lib/biobb_adapters/cwl/biobb_vs/utils/box_residues.cwl -> build/bdist.linux-armv7l/wheel/biobb_adapters/cwl/biobb_vs/utils 2021-10-30T07:59:57,276 creating build/bdist.linux-armv7l/wheel/biobb_adapters/cwl/biobb_vs/fpocket 2021-10-30T07:59:57,278 copying build/lib/biobb_adapters/cwl/biobb_vs/fpocket/fpocket_select.cwl -> build/bdist.linux-armv7l/wheel/biobb_adapters/cwl/biobb_vs/fpocket 2021-10-30T07:59:57,284 copying build/lib/biobb_adapters/cwl/biobb_vs/fpocket/fpocket.cwl -> build/bdist.linux-armv7l/wheel/biobb_adapters/cwl/biobb_vs/fpocket 2021-10-30T07:59:57,290 copying build/lib/biobb_adapters/cwl/biobb_vs/fpocket/fpocket_filter.cwl -> build/bdist.linux-armv7l/wheel/biobb_adapters/cwl/biobb_vs/fpocket 2021-10-30T07:59:57,297 creating build/bdist.linux-armv7l/wheel/biobb_adapters/cwl/biobb_vs/vina 2021-10-30T07:59:57,299 copying build/lib/biobb_adapters/cwl/biobb_vs/vina/autodock_vina.cwl -> build/bdist.linux-armv7l/wheel/biobb_adapters/cwl/biobb_vs/vina 2021-10-30T07:59:57,305 copying build/lib/biobb_adapters/cwl/biobb_vs/fpocket_select.cwl -> build/bdist.linux-armv7l/wheel/biobb_adapters/cwl/biobb_vs 2021-10-30T07:59:57,311 copying build/lib/biobb_adapters/cwl/biobb_vs/fpocket.cwl -> build/bdist.linux-armv7l/wheel/biobb_adapters/cwl/biobb_vs 2021-10-30T07:59:57,317 copying build/lib/biobb_adapters/cwl/biobb_vs/fpocket_filter.cwl -> build/bdist.linux-armv7l/wheel/biobb_adapters/cwl/biobb_vs 2021-10-30T07:59:57,323 copying build/lib/biobb_adapters/cwl/biobb_vs/box.cwl -> build/bdist.linux-armv7l/wheel/biobb_adapters/cwl/biobb_vs 2021-10-30T07:59:57,328 copying build/lib/biobb_adapters/cwl/biobb_vs/box_residues.cwl -> build/bdist.linux-armv7l/wheel/biobb_adapters/cwl/biobb_vs 2021-10-30T07:59:57,334 copying build/lib/biobb_adapters/cwl/biobb_vs/autodock_vina.cwl -> build/bdist.linux-armv7l/wheel/biobb_adapters/cwl/biobb_vs 2021-10-30T07:59:57,339 copying build/lib/biobb_adapters/cwl/biobb_vs/autodock_vina_run.cwl -> build/bdist.linux-armv7l/wheel/biobb_adapters/cwl/biobb_vs 2021-10-30T07:59:57,345 copying build/lib/biobb_adapters/cwl/biobb_vs/fpocket_run.cwl -> build/bdist.linux-armv7l/wheel/biobb_adapters/cwl/biobb_vs 2021-10-30T07:59:57,354 creating build/bdist.linux-armv7l/wheel/biobb_adapters/cwl/biobb_ml 2021-10-30T07:59:57,357 copying build/lib/biobb_adapters/cwl/biobb_ml/k_means_coefficient.cwl -> build/bdist.linux-armv7l/wheel/biobb_adapters/cwl/biobb_ml 2021-10-30T07:59:57,363 copying build/lib/biobb_adapters/cwl/biobb_ml/map_variables.cwl -> build/bdist.linux-armv7l/wheel/biobb_adapters/cwl/biobb_ml 2021-10-30T07:59:57,371 creating build/bdist.linux-armv7l/wheel/biobb_adapters/cwl/biobb_ml/clustering 2021-10-30T07:59:57,373 copying build/lib/biobb_adapters/cwl/biobb_ml/clustering/k_means_coefficient.cwl -> build/bdist.linux-armv7l/wheel/biobb_adapters/cwl/biobb_ml/clustering 2021-10-30T07:59:57,379 copying build/lib/biobb_adapters/cwl/biobb_ml/clustering/spectral_clustering.cwl -> build/bdist.linux-armv7l/wheel/biobb_adapters/cwl/biobb_ml/clustering 2021-10-30T07:59:57,385 copying build/lib/biobb_adapters/cwl/biobb_ml/clustering/spectral_coefficient.cwl -> build/bdist.linux-armv7l/wheel/biobb_adapters/cwl/biobb_ml/clustering 2021-10-30T07:59:57,391 copying build/lib/biobb_adapters/cwl/biobb_ml/clustering/clustering_predict.cwl -> build/bdist.linux-armv7l/wheel/biobb_adapters/cwl/biobb_ml/clustering 2021-10-30T07:59:57,397 copying build/lib/biobb_adapters/cwl/biobb_ml/clustering/k_means.cwl -> build/bdist.linux-armv7l/wheel/biobb_adapters/cwl/biobb_ml/clustering 2021-10-30T07:59:57,403 copying build/lib/biobb_adapters/cwl/biobb_ml/clustering/dbscan.cwl -> build/bdist.linux-armv7l/wheel/biobb_adapters/cwl/biobb_ml/clustering 2021-10-30T07:59:57,408 copying build/lib/biobb_adapters/cwl/biobb_ml/clustering/agglomerative_coefficient.cwl -> build/bdist.linux-armv7l/wheel/biobb_adapters/cwl/biobb_ml/clustering 2021-10-30T07:59:57,414 copying build/lib/biobb_adapters/cwl/biobb_ml/clustering/agglomerative_clustering.cwl -> build/bdist.linux-armv7l/wheel/biobb_adapters/cwl/biobb_ml/clustering 2021-10-30T07:59:57,420 copying build/lib/biobb_adapters/cwl/biobb_ml/neural_network_decode.cwl -> build/bdist.linux-armv7l/wheel/biobb_adapters/cwl/biobb_ml 2021-10-30T07:59:57,426 copying build/lib/biobb_adapters/cwl/biobb_ml/spectral_clustering.cwl -> build/bdist.linux-armv7l/wheel/biobb_adapters/cwl/biobb_ml 2021-10-30T07:59:57,431 copying build/lib/biobb_adapters/cwl/biobb_ml/spectral_coefficient.cwl -> build/bdist.linux-armv7l/wheel/biobb_adapters/cwl/biobb_ml 2021-10-30T07:59:57,437 copying build/lib/biobb_adapters/cwl/biobb_ml/clustering_predict.cwl -> build/bdist.linux-armv7l/wheel/biobb_adapters/cwl/biobb_ml 2021-10-30T07:59:57,443 copying build/lib/biobb_adapters/cwl/biobb_ml/decision_tree.cwl -> build/bdist.linux-armv7l/wheel/biobb_adapters/cwl/biobb_ml 2021-10-30T07:59:57,449 copying build/lib/biobb_adapters/cwl/biobb_ml/k_neighbors_coefficient.cwl -> build/bdist.linux-armv7l/wheel/biobb_adapters/cwl/biobb_ml 2021-10-30T07:59:57,455 copying build/lib/biobb_adapters/cwl/biobb_ml/dummy_variables.cwl -> build/bdist.linux-armv7l/wheel/biobb_adapters/cwl/biobb_ml 2021-10-30T07:59:57,460 copying build/lib/biobb_adapters/cwl/biobb_ml/k_means.cwl -> build/bdist.linux-armv7l/wheel/biobb_adapters/cwl/biobb_ml 2021-10-30T07:59:57,466 copying build/lib/biobb_adapters/cwl/biobb_ml/undersampling.cwl -> build/bdist.linux-armv7l/wheel/biobb_adapters/cwl/biobb_ml 2021-10-30T07:59:57,473 creating build/bdist.linux-armv7l/wheel/biobb_adapters/cwl/biobb_ml/utils 2021-10-30T07:59:57,476 copying build/lib/biobb_adapters/cwl/biobb_ml/utils/map_variables.cwl -> build/bdist.linux-armv7l/wheel/biobb_adapters/cwl/biobb_ml/utils 2021-10-30T07:59:57,482 copying build/lib/biobb_adapters/cwl/biobb_ml/utils/dummy_variables.cwl -> build/bdist.linux-armv7l/wheel/biobb_adapters/cwl/biobb_ml/utils 2021-10-30T07:59:57,488 copying build/lib/biobb_adapters/cwl/biobb_ml/utils/pairwise_comparison.cwl -> build/bdist.linux-armv7l/wheel/biobb_adapters/cwl/biobb_ml/utils 2021-10-30T07:59:57,493 copying build/lib/biobb_adapters/cwl/biobb_ml/utils/dendrogram.cwl -> build/bdist.linux-armv7l/wheel/biobb_adapters/cwl/biobb_ml/utils 2021-10-30T07:59:57,499 copying build/lib/biobb_adapters/cwl/biobb_ml/utils/drop_columns.cwl -> build/bdist.linux-armv7l/wheel/biobb_adapters/cwl/biobb_ml/utils 2021-10-30T07:59:57,505 copying build/lib/biobb_adapters/cwl/biobb_ml/utils/scale_columns.cwl -> build/bdist.linux-armv7l/wheel/biobb_adapters/cwl/biobb_ml/utils 2021-10-30T07:59:57,510 copying build/lib/biobb_adapters/cwl/biobb_ml/utils/correlation_matrix.cwl -> build/bdist.linux-armv7l/wheel/biobb_adapters/cwl/biobb_ml/utils 2021-10-30T07:59:57,518 creating build/bdist.linux-armv7l/wheel/biobb_adapters/cwl/biobb_ml/classification 2021-10-30T07:59:57,520 copying build/lib/biobb_adapters/cwl/biobb_ml/classification/decision_tree.cwl -> build/bdist.linux-armv7l/wheel/biobb_adapters/cwl/biobb_ml/classification 2021-10-30T07:59:57,527 copying build/lib/biobb_adapters/cwl/biobb_ml/classification/k_neighbors_coefficient.cwl -> build/bdist.linux-armv7l/wheel/biobb_adapters/cwl/biobb_ml/classification 2021-10-30T07:59:57,533 copying build/lib/biobb_adapters/cwl/biobb_ml/classification/support_vector_machine.cwl -> build/bdist.linux-armv7l/wheel/biobb_adapters/cwl/biobb_ml/classification 2021-10-30T07:59:57,539 copying build/lib/biobb_adapters/cwl/biobb_ml/classification/logistic_regression.cwl -> build/bdist.linux-armv7l/wheel/biobb_adapters/cwl/biobb_ml/classification 2021-10-30T07:59:57,546 copying build/lib/biobb_adapters/cwl/biobb_ml/classification/random_forest_classifier.cwl -> build/bdist.linux-armv7l/wheel/biobb_adapters/cwl/biobb_ml/classification 2021-10-30T07:59:57,552 copying build/lib/biobb_adapters/cwl/biobb_ml/classification/k_neighbors.cwl -> build/bdist.linux-armv7l/wheel/biobb_adapters/cwl/biobb_ml/classification 2021-10-30T07:59:57,559 copying build/lib/biobb_adapters/cwl/biobb_ml/classification/classification_predict.cwl -> build/bdist.linux-armv7l/wheel/biobb_adapters/cwl/biobb_ml/classification 2021-10-30T07:59:57,565 copying build/lib/biobb_adapters/cwl/biobb_ml/support_vector_machine.cwl -> build/bdist.linux-armv7l/wheel/biobb_adapters/cwl/biobb_ml 2021-10-30T07:59:57,573 creating build/bdist.linux-armv7l/wheel/biobb_adapters/cwl/biobb_ml/dimensionality_reduction 2021-10-30T07:59:57,575 copying build/lib/biobb_adapters/cwl/biobb_ml/dimensionality_reduction/principal_component.cwl -> build/bdist.linux-armv7l/wheel/biobb_adapters/cwl/biobb_ml/dimensionality_reduction 2021-10-30T07:59:57,581 copying build/lib/biobb_adapters/cwl/biobb_ml/dimensionality_reduction/pls_components.cwl -> build/bdist.linux-armv7l/wheel/biobb_adapters/cwl/biobb_ml/dimensionality_reduction 2021-10-30T07:59:57,587 copying build/lib/biobb_adapters/cwl/biobb_ml/dimensionality_reduction/pls_regression.cwl -> build/bdist.linux-armv7l/wheel/biobb_adapters/cwl/biobb_ml/dimensionality_reduction 2021-10-30T07:59:57,593 copying build/lib/biobb_adapters/cwl/biobb_ml/pairwise_comparison.cwl -> build/bdist.linux-armv7l/wheel/biobb_adapters/cwl/biobb_ml 2021-10-30T07:59:57,599 copying build/lib/biobb_adapters/cwl/biobb_ml/linear_regression.cwl -> build/bdist.linux-armv7l/wheel/biobb_adapters/cwl/biobb_ml 2021-10-30T07:59:57,605 copying build/lib/biobb_adapters/cwl/biobb_ml/resampling.cwl -> build/bdist.linux-armv7l/wheel/biobb_adapters/cwl/biobb_ml 2021-10-30T07:59:57,610 copying build/lib/biobb_adapters/cwl/biobb_ml/autoencoder_neural_network.cwl -> build/bdist.linux-armv7l/wheel/biobb_adapters/cwl/biobb_ml 2021-10-30T07:59:57,617 copying build/lib/biobb_adapters/cwl/biobb_ml/logistic_regression.cwl -> build/bdist.linux-armv7l/wheel/biobb_adapters/cwl/biobb_ml 2021-10-30T07:59:57,624 copying build/lib/biobb_adapters/cwl/biobb_ml/dendrogram.cwl -> build/bdist.linux-armv7l/wheel/biobb_adapters/cwl/biobb_ml 2021-10-30T07:59:57,629 copying build/lib/biobb_adapters/cwl/biobb_ml/dbscan.cwl -> build/bdist.linux-armv7l/wheel/biobb_adapters/cwl/biobb_ml 2021-10-30T07:59:57,635 copying build/lib/biobb_adapters/cwl/biobb_ml/drop_columns.cwl -> build/bdist.linux-armv7l/wheel/biobb_adapters/cwl/biobb_ml 2021-10-30T07:59:57,640 copying build/lib/biobb_adapters/cwl/biobb_ml/regression_predict.cwl -> build/bdist.linux-armv7l/wheel/biobb_adapters/cwl/biobb_ml 2021-10-30T07:59:57,646 copying build/lib/biobb_adapters/cwl/biobb_ml/agglomerative_coefficient.cwl -> build/bdist.linux-armv7l/wheel/biobb_adapters/cwl/biobb_ml 2021-10-30T07:59:57,653 creating build/bdist.linux-armv7l/wheel/biobb_adapters/cwl/biobb_ml/regression 2021-10-30T07:59:57,655 copying build/lib/biobb_adapters/cwl/biobb_ml/regression/linear_regression.cwl -> build/bdist.linux-armv7l/wheel/biobb_adapters/cwl/biobb_ml/regression 2021-10-30T07:59:57,661 copying build/lib/biobb_adapters/cwl/biobb_ml/regression/regression_predict.cwl -> build/bdist.linux-armv7l/wheel/biobb_adapters/cwl/biobb_ml/regression 2021-10-30T07:59:57,667 copying build/lib/biobb_adapters/cwl/biobb_ml/regression/random_forest_regressor.cwl -> build/bdist.linux-armv7l/wheel/biobb_adapters/cwl/biobb_ml/regression 2021-10-30T07:59:57,673 copying build/lib/biobb_adapters/cwl/biobb_ml/regression/polynomial_regression.cwl -> build/bdist.linux-armv7l/wheel/biobb_adapters/cwl/biobb_ml/regression 2021-10-30T07:59:57,680 creating build/bdist.linux-armv7l/wheel/biobb_adapters/cwl/biobb_ml/neural_networks 2021-10-30T07:59:57,682 copying build/lib/biobb_adapters/cwl/biobb_ml/neural_networks/neural_network_decode.cwl -> build/bdist.linux-armv7l/wheel/biobb_adapters/cwl/biobb_ml/neural_networks 2021-10-30T07:59:57,688 copying build/lib/biobb_adapters/cwl/biobb_ml/neural_networks/autoencoder_neural_network.cwl -> build/bdist.linux-armv7l/wheel/biobb_adapters/cwl/biobb_ml/neural_networks 2021-10-30T07:59:57,695 copying build/lib/biobb_adapters/cwl/biobb_ml/neural_networks/classification_neural_network.cwl -> build/bdist.linux-armv7l/wheel/biobb_adapters/cwl/biobb_ml/neural_networks 2021-10-30T07:59:57,700 copying build/lib/biobb_adapters/cwl/biobb_ml/neural_networks/regression_neural_network.cwl -> build/bdist.linux-armv7l/wheel/biobb_adapters/cwl/biobb_ml/neural_networks 2021-10-30T07:59:57,706 copying build/lib/biobb_adapters/cwl/biobb_ml/neural_networks/recurrent_neural_network.cwl -> build/bdist.linux-armv7l/wheel/biobb_adapters/cwl/biobb_ml/neural_networks 2021-10-30T07:59:57,711 copying build/lib/biobb_adapters/cwl/biobb_ml/neural_networks/neural_network_predict.cwl -> build/bdist.linux-armv7l/wheel/biobb_adapters/cwl/biobb_ml/neural_networks 2021-10-30T07:59:57,717 copying build/lib/biobb_adapters/cwl/biobb_ml/random_forest_regressor.cwl -> build/bdist.linux-armv7l/wheel/biobb_adapters/cwl/biobb_ml 2021-10-30T07:59:57,722 copying build/lib/biobb_adapters/cwl/biobb_ml/classification_neural_network.cwl -> build/bdist.linux-armv7l/wheel/biobb_adapters/cwl/biobb_ml 2021-10-30T07:59:57,728 copying build/lib/biobb_adapters/cwl/biobb_ml/principal_component.cwl -> build/bdist.linux-armv7l/wheel/biobb_adapters/cwl/biobb_ml 2021-10-30T07:59:57,734 copying build/lib/biobb_adapters/cwl/biobb_ml/polynomial_regression.cwl -> build/bdist.linux-armv7l/wheel/biobb_adapters/cwl/biobb_ml 2021-10-30T07:59:57,739 copying build/lib/biobb_adapters/cwl/biobb_ml/regression_neural_network.cwl -> build/bdist.linux-armv7l/wheel/biobb_adapters/cwl/biobb_ml 2021-10-30T07:59:57,745 copying build/lib/biobb_adapters/cwl/biobb_ml/pls_components.cwl -> build/bdist.linux-armv7l/wheel/biobb_adapters/cwl/biobb_ml 2021-10-30T07:59:57,750 copying build/lib/biobb_adapters/cwl/biobb_ml/recurrent_neural_network.cwl -> build/bdist.linux-armv7l/wheel/biobb_adapters/cwl/biobb_ml 2021-10-30T07:59:57,755 copying build/lib/biobb_adapters/cwl/biobb_ml/pls_regression.cwl -> build/bdist.linux-armv7l/wheel/biobb_adapters/cwl/biobb_ml 2021-10-30T07:59:57,761 copying build/lib/biobb_adapters/cwl/biobb_ml/scale_columns.cwl -> build/bdist.linux-armv7l/wheel/biobb_adapters/cwl/biobb_ml 2021-10-30T07:59:57,766 copying build/lib/biobb_adapters/cwl/biobb_ml/random_forest_classifier.cwl -> build/bdist.linux-armv7l/wheel/biobb_adapters/cwl/biobb_ml 2021-10-30T07:59:57,773 copying build/lib/biobb_adapters/cwl/biobb_ml/oversampling.cwl -> build/bdist.linux-armv7l/wheel/biobb_adapters/cwl/biobb_ml 2021-10-30T07:59:57,778 copying build/lib/biobb_adapters/cwl/biobb_ml/k_neighbors.cwl -> build/bdist.linux-armv7l/wheel/biobb_adapters/cwl/biobb_ml 2021-10-30T07:59:57,784 copying build/lib/biobb_adapters/cwl/biobb_ml/correlation_matrix.cwl -> build/bdist.linux-armv7l/wheel/biobb_adapters/cwl/biobb_ml 2021-10-30T07:59:57,789 copying build/lib/biobb_adapters/cwl/biobb_ml/classification_predict.cwl -> build/bdist.linux-armv7l/wheel/biobb_adapters/cwl/biobb_ml 2021-10-30T07:59:57,795 copying build/lib/biobb_adapters/cwl/biobb_ml/neural_network_predict.cwl -> build/bdist.linux-armv7l/wheel/biobb_adapters/cwl/biobb_ml 2021-10-30T07:59:57,802 creating build/bdist.linux-armv7l/wheel/biobb_adapters/cwl/biobb_ml/resampling 2021-10-30T07:59:57,805 copying build/lib/biobb_adapters/cwl/biobb_ml/resampling/undersampling.cwl -> build/bdist.linux-armv7l/wheel/biobb_adapters/cwl/biobb_ml/resampling 2021-10-30T07:59:57,811 copying build/lib/biobb_adapters/cwl/biobb_ml/resampling/resampling.cwl -> build/bdist.linux-armv7l/wheel/biobb_adapters/cwl/biobb_ml/resampling 2021-10-30T07:59:57,816 copying build/lib/biobb_adapters/cwl/biobb_ml/resampling/oversampling.cwl -> build/bdist.linux-armv7l/wheel/biobb_adapters/cwl/biobb_ml/resampling 2021-10-30T07:59:57,822 copying build/lib/biobb_adapters/cwl/biobb_ml/agglomerative_clustering.cwl -> build/bdist.linux-armv7l/wheel/biobb_adapters/cwl/biobb_ml 2021-10-30T07:59:57,829 creating build/bdist.linux-armv7l/wheel/biobb_adapters/cwl/biobb_chemistry 2021-10-30T07:59:57,832 copying build/lib/biobb_adapters/cwl/biobb_chemistry/reduce_remove_hydrogens.cwl -> build/bdist.linux-armv7l/wheel/biobb_adapters/cwl/biobb_chemistry 2021-10-30T07:59:57,837 copying build/lib/biobb_adapters/cwl/biobb_chemistry/acpype_params_gmx_opls.cwl -> build/bdist.linux-armv7l/wheel/biobb_adapters/cwl/biobb_chemistry 2021-10-30T07:59:57,844 creating build/bdist.linux-armv7l/wheel/biobb_adapters/cwl/biobb_chemistry/acpype 2021-10-30T07:59:57,847 copying build/lib/biobb_adapters/cwl/biobb_chemistry/acpype/acpype_params_gmx_opls.cwl -> build/bdist.linux-armv7l/wheel/biobb_adapters/cwl/biobb_chemistry/acpype 2021-10-30T07:59:57,853 copying build/lib/biobb_adapters/cwl/biobb_chemistry/acpype/acpype_params_gmx.cwl -> build/bdist.linux-armv7l/wheel/biobb_adapters/cwl/biobb_chemistry/acpype 2021-10-30T07:59:57,858 copying build/lib/biobb_adapters/cwl/biobb_chemistry/acpype/acpype_params_ac.cwl -> build/bdist.linux-armv7l/wheel/biobb_adapters/cwl/biobb_chemistry/acpype 2021-10-30T07:59:57,864 copying build/lib/biobb_adapters/cwl/biobb_chemistry/acpype/acpype_params_cns.cwl -> build/bdist.linux-armv7l/wheel/biobb_adapters/cwl/biobb_chemistry/acpype 2021-10-30T07:59:57,870 copying build/lib/biobb_adapters/cwl/biobb_chemistry/babel_minimize.cwl -> build/bdist.linux-armv7l/wheel/biobb_adapters/cwl/biobb_chemistry 2021-10-30T07:59:57,877 creating build/bdist.linux-armv7l/wheel/biobb_adapters/cwl/biobb_chemistry/babelm 2021-10-30T07:59:57,879 copying build/lib/biobb_adapters/cwl/biobb_chemistry/babelm/babel_minimize.cwl -> build/bdist.linux-armv7l/wheel/biobb_adapters/cwl/biobb_chemistry/babelm 2021-10-30T07:59:57,885 copying build/lib/biobb_adapters/cwl/biobb_chemistry/babelm/babel_convert.cwl -> build/bdist.linux-armv7l/wheel/biobb_adapters/cwl/biobb_chemistry/babelm 2021-10-30T07:59:57,891 copying build/lib/biobb_adapters/cwl/biobb_chemistry/babelm/babel_remove_hydrogens.cwl -> build/bdist.linux-armv7l/wheel/biobb_adapters/cwl/biobb_chemistry/babelm 2021-10-30T07:59:57,897 copying build/lib/biobb_adapters/cwl/biobb_chemistry/babelm/babel_add_hydrogens.cwl -> build/bdist.linux-armv7l/wheel/biobb_adapters/cwl/biobb_chemistry/babelm 2021-10-30T07:59:57,903 copying build/lib/biobb_adapters/cwl/biobb_chemistry/babel_convert.cwl -> build/bdist.linux-armv7l/wheel/biobb_adapters/cwl/biobb_chemistry 2021-10-30T07:59:57,908 copying build/lib/biobb_adapters/cwl/biobb_chemistry/acpype_params_gmx.cwl -> build/bdist.linux-armv7l/wheel/biobb_adapters/cwl/biobb_chemistry 2021-10-30T07:59:57,914 copying build/lib/biobb_adapters/cwl/biobb_chemistry/babel_remove_hydrogens.cwl -> build/bdist.linux-armv7l/wheel/biobb_adapters/cwl/biobb_chemistry 2021-10-30T07:59:57,921 creating build/bdist.linux-armv7l/wheel/biobb_adapters/cwl/biobb_chemistry/test 2021-10-30T07:59:57,926 creating build/bdist.linux-armv7l/wheel/biobb_adapters/cwl/biobb_chemistry/test/acpype 2021-10-30T07:59:57,928 copying build/lib/biobb_adapters/cwl/biobb_chemistry/test/acpype/acpype_params_ac.yml -> build/bdist.linux-armv7l/wheel/biobb_adapters/cwl/biobb_chemistry/test/acpype 2021-10-30T07:59:57,935 copying build/lib/biobb_adapters/cwl/biobb_chemistry/test/acpype/acpype_params_gmx.yml -> build/bdist.linux-armv7l/wheel/biobb_adapters/cwl/biobb_chemistry/test/acpype 2021-10-30T07:59:57,940 copying build/lib/biobb_adapters/cwl/biobb_chemistry/test/acpype/acpype_params_cns.yml -> build/bdist.linux-armv7l/wheel/biobb_adapters/cwl/biobb_chemistry/test/acpype 2021-10-30T07:59:57,945 copying build/lib/biobb_adapters/cwl/biobb_chemistry/test/acpype/acpype_params_gmx_opls.yml -> build/bdist.linux-armv7l/wheel/biobb_adapters/cwl/biobb_chemistry/test/acpype 2021-10-30T07:59:57,952 creating build/bdist.linux-armv7l/wheel/biobb_adapters/cwl/biobb_chemistry/test/babelm 2021-10-30T07:59:57,955 copying build/lib/biobb_adapters/cwl/biobb_chemistry/test/babelm/babel_remove_hydrogens.yml -> build/bdist.linux-armv7l/wheel/biobb_adapters/cwl/biobb_chemistry/test/babelm 2021-10-30T07:59:57,961 copying build/lib/biobb_adapters/cwl/biobb_chemistry/test/babelm/babel_minimize.yml -> build/bdist.linux-armv7l/wheel/biobb_adapters/cwl/biobb_chemistry/test/babelm 2021-10-30T07:59:57,967 copying build/lib/biobb_adapters/cwl/biobb_chemistry/test/babelm/babel_convert.yml -> build/bdist.linux-armv7l/wheel/biobb_adapters/cwl/biobb_chemistry/test/babelm 2021-10-30T07:59:57,972 copying build/lib/biobb_adapters/cwl/biobb_chemistry/test/babelm/babel_add_hydrogens.yml -> build/bdist.linux-armv7l/wheel/biobb_adapters/cwl/biobb_chemistry/test/babelm 2021-10-30T07:59:57,979 creating build/bdist.linux-armv7l/wheel/biobb_adapters/cwl/biobb_chemistry/test/ambertools 2021-10-30T07:59:57,982 copying build/lib/biobb_adapters/cwl/biobb_chemistry/test/ambertools/reduce_add_hydrogens.yml -> build/bdist.linux-armv7l/wheel/biobb_adapters/cwl/biobb_chemistry/test/ambertools 2021-10-30T07:59:57,988 copying build/lib/biobb_adapters/cwl/biobb_chemistry/test/ambertools/reduce_remove_hydrogens.yml -> build/bdist.linux-armv7l/wheel/biobb_adapters/cwl/biobb_chemistry/test/ambertools 2021-10-30T07:59:57,993 copying build/lib/biobb_adapters/cwl/biobb_chemistry/test/cwl_unitest.sh -> build/bdist.linux-armv7l/wheel/biobb_adapters/cwl/biobb_chemistry/test 2021-10-30T07:59:58,000 creating build/bdist.linux-armv7l/wheel/biobb_adapters/cwl/biobb_chemistry/test/data 2021-10-30T07:59:58,004 creating build/bdist.linux-armv7l/wheel/biobb_adapters/cwl/biobb_chemistry/test/data/acpype 2021-10-30T07:59:58,007 copying build/lib/biobb_adapters/cwl/biobb_chemistry/test/data/acpype/acpype.params.mol2 -> build/bdist.linux-armv7l/wheel/biobb_adapters/cwl/biobb_chemistry/test/data/acpype 2021-10-30T07:59:58,014 copying build/lib/biobb_adapters/cwl/biobb_chemistry/test/data/acpype/acpype.params.pdb -> build/bdist.linux-armv7l/wheel/biobb_adapters/cwl/biobb_chemistry/test/data/acpype 2021-10-30T07:59:58,022 creating build/bdist.linux-armv7l/wheel/biobb_adapters/cwl/biobb_chemistry/test/data/babelm 2021-10-30T07:59:58,025 copying build/lib/biobb_adapters/cwl/biobb_chemistry/test/data/babelm/babel.H.pdb -> build/bdist.linux-armv7l/wheel/biobb_adapters/cwl/biobb_chemistry/test/data/babelm 2021-10-30T07:59:58,032 copying build/lib/biobb_adapters/cwl/biobb_chemistry/test/data/babelm/babel.no.H.pdb -> build/bdist.linux-armv7l/wheel/biobb_adapters/cwl/biobb_chemistry/test/data/babelm 2021-10-30T07:59:58,037 copying build/lib/biobb_adapters/cwl/biobb_chemistry/test/data/babelm/babel.smi -> build/bdist.linux-armv7l/wheel/biobb_adapters/cwl/biobb_chemistry/test/data/babelm 2021-10-30T07:59:58,043 copying build/lib/biobb_adapters/cwl/biobb_chemistry/test/data/babelm/babel.minimize.pdb -> build/bdist.linux-armv7l/wheel/biobb_adapters/cwl/biobb_chemistry/test/data/babelm 2021-10-30T07:59:58,051 creating build/bdist.linux-armv7l/wheel/biobb_adapters/cwl/biobb_chemistry/test/data/ambertools 2021-10-30T07:59:58,053 copying build/lib/biobb_adapters/cwl/biobb_chemistry/test/data/ambertools/reduce.H.pdb -> build/bdist.linux-armv7l/wheel/biobb_adapters/cwl/biobb_chemistry/test/data/ambertools 2021-10-30T07:59:58,060 copying build/lib/biobb_adapters/cwl/biobb_chemistry/test/data/ambertools/reduce.no.H.pdb -> build/bdist.linux-armv7l/wheel/biobb_adapters/cwl/biobb_chemistry/test/data/ambertools 2021-10-30T07:59:58,068 creating build/bdist.linux-armv7l/wheel/biobb_adapters/cwl/biobb_chemistry/ambertools 2021-10-30T07:59:58,070 copying build/lib/biobb_adapters/cwl/biobb_chemistry/ambertools/reduce_remove_hydrogens.cwl -> build/bdist.linux-armv7l/wheel/biobb_adapters/cwl/biobb_chemistry/ambertools 2021-10-30T07:59:58,076 copying build/lib/biobb_adapters/cwl/biobb_chemistry/ambertools/reduce_add_hydrogens.cwl -> build/bdist.linux-armv7l/wheel/biobb_adapters/cwl/biobb_chemistry/ambertools 2021-10-30T07:59:58,082 copying build/lib/biobb_adapters/cwl/biobb_chemistry/reduce_add_hydrogens.cwl -> build/bdist.linux-armv7l/wheel/biobb_adapters/cwl/biobb_chemistry 2021-10-30T07:59:58,088 copying build/lib/biobb_adapters/cwl/biobb_chemistry/acpype_params_ac.cwl -> build/bdist.linux-armv7l/wheel/biobb_adapters/cwl/biobb_chemistry 2021-10-30T07:59:58,098 copying build/lib/biobb_adapters/cwl/biobb_chemistry/acpype_params_cns.cwl -> build/bdist.linux-armv7l/wheel/biobb_adapters/cwl/biobb_chemistry 2021-10-30T07:59:58,104 copying build/lib/biobb_adapters/cwl/biobb_chemistry/babel_add_hydrogens.cwl -> build/bdist.linux-armv7l/wheel/biobb_adapters/cwl/biobb_chemistry 2021-10-30T07:59:58,112 creating build/bdist.linux-armv7l/wheel/biobb_adapters/cwl/biobb_amber 2021-10-30T07:59:58,115 creating build/bdist.linux-armv7l/wheel/biobb_adapters/cwl/biobb_amber/ambpdb 2021-10-30T07:59:58,117 copying build/lib/biobb_adapters/cwl/biobb_amber/ambpdb/amber_to_pdb.cwl -> build/bdist.linux-armv7l/wheel/biobb_adapters/cwl/biobb_amber/ambpdb 2021-10-30T07:59:58,122 copying build/lib/biobb_adapters/cwl/biobb_amber/parmed_cpinutil.cwl -> build/bdist.linux-armv7l/wheel/biobb_adapters/cwl/biobb_amber 2021-10-30T07:59:58,128 creating build/bdist.linux-armv7l/wheel/biobb_adapters/cwl/biobb_amber/sander 2021-10-30T07:59:58,131 copying build/lib/biobb_adapters/cwl/biobb_amber/sander/sander_mdrun.cwl -> build/bdist.linux-armv7l/wheel/biobb_adapters/cwl/biobb_amber/sander 2021-10-30T07:59:58,139 creating build/bdist.linux-armv7l/wheel/biobb_adapters/cwl/biobb_amber/nap 2021-10-30T07:59:58,142 copying build/lib/biobb_adapters/cwl/biobb_amber/nap/nab_build_dna_structure.cwl -> build/bdist.linux-armv7l/wheel/biobb_adapters/cwl/biobb_amber/nap 2021-10-30T07:59:58,148 copying build/lib/biobb_adapters/cwl/biobb_amber/cphstats_run.cwl -> build/bdist.linux-armv7l/wheel/biobb_adapters/cwl/biobb_amber 2021-10-30T07:59:58,154 copying build/lib/biobb_adapters/cwl/biobb_amber/cpptraj_randomize_ions.cwl -> build/bdist.linux-armv7l/wheel/biobb_adapters/cwl/biobb_amber 2021-10-30T07:59:58,162 creating build/bdist.linux-armv7l/wheel/biobb_adapters/cwl/biobb_amber/leap 2021-10-30T07:59:58,164 copying build/lib/biobb_adapters/cwl/biobb_amber/leap/leap_add_ions.cwl -> build/bdist.linux-armv7l/wheel/biobb_adapters/cwl/biobb_amber/leap 2021-10-30T07:59:58,171 copying build/lib/biobb_adapters/cwl/biobb_amber/leap/leap_gen_top.cwl -> build/bdist.linux-armv7l/wheel/biobb_adapters/cwl/biobb_amber/leap 2021-10-30T07:59:58,178 copying build/lib/biobb_adapters/cwl/biobb_amber/leap/leap_solvate.cwl -> build/bdist.linux-armv7l/wheel/biobb_adapters/cwl/biobb_amber/leap 2021-10-30T07:59:58,185 copying build/lib/biobb_adapters/cwl/biobb_amber/leap/leap_build_linear_structure.cwl -> build/bdist.linux-armv7l/wheel/biobb_adapters/cwl/biobb_amber/leap 2021-10-30T07:59:58,190 copying build/lib/biobb_adapters/cwl/biobb_amber/process_minout.cwl -> build/bdist.linux-armv7l/wheel/biobb_adapters/cwl/biobb_amber 2021-10-30T07:59:58,196 copying build/lib/biobb_adapters/cwl/biobb_amber/sander_mdrun.cwl -> build/bdist.linux-armv7l/wheel/biobb_adapters/cwl/biobb_amber 2021-10-30T07:59:58,203 copying build/lib/biobb_adapters/cwl/biobb_amber/pdb4amber.cwl -> build/bdist.linux-armv7l/wheel/biobb_adapters/cwl/biobb_amber 2021-10-30T07:59:58,208 copying build/lib/biobb_adapters/cwl/biobb_amber/cestats_run.cwl -> build/bdist.linux-armv7l/wheel/biobb_adapters/cwl/biobb_amber 2021-10-30T07:59:58,215 copying build/lib/biobb_adapters/cwl/biobb_amber/process_mdout.cwl -> build/bdist.linux-armv7l/wheel/biobb_adapters/cwl/biobb_amber 2021-10-30T07:59:58,221 copying build/lib/biobb_adapters/cwl/biobb_amber/leap_add_ions.cwl -> build/bdist.linux-armv7l/wheel/biobb_adapters/cwl/biobb_amber 2021-10-30T07:59:58,227 copying build/lib/biobb_adapters/cwl/biobb_amber/pmemd_mdrun.cwl -> build/bdist.linux-armv7l/wheel/biobb_adapters/cwl/biobb_amber 2021-10-30T07:59:58,236 creating build/bdist.linux-armv7l/wheel/biobb_adapters/cwl/biobb_amber/cpptraj 2021-10-30T07:59:58,238 copying build/lib/biobb_adapters/cwl/biobb_amber/cpptraj/cpptraj_randomize_ions.cwl -> build/bdist.linux-armv7l/wheel/biobb_adapters/cwl/biobb_amber/cpptraj 2021-10-30T07:59:58,244 copying build/lib/biobb_adapters/cwl/biobb_amber/leap_gen_top.cwl -> build/bdist.linux-armv7l/wheel/biobb_adapters/cwl/biobb_amber 2021-10-30T07:59:58,251 copying build/lib/biobb_adapters/cwl/biobb_amber/pdb4amber_run.cwl -> build/bdist.linux-armv7l/wheel/biobb_adapters/cwl/biobb_amber 2021-10-30T07:59:58,257 copying build/lib/biobb_adapters/cwl/biobb_amber/parmed_hmassrepartition.cwl -> build/bdist.linux-armv7l/wheel/biobb_adapters/cwl/biobb_amber 2021-10-30T07:59:58,264 creating build/bdist.linux-armv7l/wheel/biobb_adapters/cwl/biobb_amber/parmed 2021-10-30T07:59:58,267 copying build/lib/biobb_adapters/cwl/biobb_amber/parmed/parmed_cpinutil.cwl -> build/bdist.linux-armv7l/wheel/biobb_adapters/cwl/biobb_amber/parmed 2021-10-30T07:59:58,273 copying build/lib/biobb_adapters/cwl/biobb_amber/parmed/parmed_hmassrepartition.cwl -> build/bdist.linux-armv7l/wheel/biobb_adapters/cwl/biobb_amber/parmed 2021-10-30T07:59:58,278 copying build/lib/biobb_adapters/cwl/biobb_amber/leap_solvate.cwl -> build/bdist.linux-armv7l/wheel/biobb_adapters/cwl/biobb_amber 2021-10-30T07:59:58,287 creating build/bdist.linux-armv7l/wheel/biobb_adapters/cwl/biobb_amber/process 2021-10-30T07:59:58,289 copying build/lib/biobb_adapters/cwl/biobb_amber/process/process_minout.cwl -> build/bdist.linux-armv7l/wheel/biobb_adapters/cwl/biobb_amber/process 2021-10-30T07:59:58,295 copying build/lib/biobb_adapters/cwl/biobb_amber/process/process_mdout.cwl -> build/bdist.linux-armv7l/wheel/biobb_adapters/cwl/biobb_amber/process 2021-10-30T07:59:58,303 creating build/bdist.linux-armv7l/wheel/biobb_adapters/cwl/biobb_amber/pmemd 2021-10-30T07:59:58,305 copying build/lib/biobb_adapters/cwl/biobb_amber/pmemd/pmemd_mdrun.cwl -> build/bdist.linux-armv7l/wheel/biobb_adapters/cwl/biobb_amber/pmemd 2021-10-30T07:59:58,313 copying build/lib/biobb_adapters/cwl/biobb_amber/amber_to_pdb.cwl -> build/bdist.linux-armv7l/wheel/biobb_adapters/cwl/biobb_amber 2021-10-30T07:59:58,318 copying build/lib/biobb_adapters/cwl/biobb_amber/leap_build_linear_structure.cwl -> build/bdist.linux-armv7l/wheel/biobb_adapters/cwl/biobb_amber 2021-10-30T07:59:58,324 copying build/lib/biobb_adapters/cwl/biobb_amber/nab_build_dna_structure.cwl -> build/bdist.linux-armv7l/wheel/biobb_adapters/cwl/biobb_amber 2021-10-30T07:59:58,331 creating build/bdist.linux-armv7l/wheel/biobb_adapters/cwl/biobb_amber/pdb4amber 2021-10-30T07:59:58,333 copying build/lib/biobb_adapters/cwl/biobb_amber/pdb4amber/pdb4amber.cwl -> build/bdist.linux-armv7l/wheel/biobb_adapters/cwl/biobb_amber/pdb4amber 2021-10-30T07:59:58,341 creating build/bdist.linux-armv7l/wheel/biobb_adapters/cwl/biobb_pmx 2021-10-30T07:59:58,343 copying build/lib/biobb_adapters/cwl/biobb_pmx/pmxgentop.cwl -> build/bdist.linux-armv7l/wheel/biobb_adapters/cwl/biobb_pmx 2021-10-30T07:59:58,349 copying build/lib/biobb_adapters/cwl/biobb_pmx/pmxmutate.cwl -> build/bdist.linux-armv7l/wheel/biobb_adapters/cwl/biobb_pmx 2021-10-30T07:59:58,355 copying build/lib/biobb_adapters/cwl/biobb_pmx/pmxanalyse.cwl -> build/bdist.linux-armv7l/wheel/biobb_adapters/cwl/biobb_pmx 2021-10-30T07:59:58,362 creating build/bdist.linux-armv7l/wheel/biobb_adapters/cwl/biobb_pmx/pmx 2021-10-30T07:59:58,364 copying build/lib/biobb_adapters/cwl/biobb_pmx/pmx/pmxgentop.cwl -> build/bdist.linux-armv7l/wheel/biobb_adapters/cwl/biobb_pmx/pmx 2021-10-30T07:59:58,370 copying build/lib/biobb_adapters/cwl/biobb_pmx/pmx/pmxmutate.cwl -> build/bdist.linux-armv7l/wheel/biobb_adapters/cwl/biobb_pmx/pmx 2021-10-30T07:59:58,376 copying build/lib/biobb_adapters/cwl/biobb_pmx/pmx/pmxanalyse.cwl -> build/bdist.linux-armv7l/wheel/biobb_adapters/cwl/biobb_pmx/pmx 2021-10-30T07:59:58,384 creating build/bdist.linux-armv7l/wheel/biobb_adapters/cwl/biobb_md 2021-10-30T07:59:58,386 copying build/lib/biobb_adapters/cwl/biobb_md/pdb2gmx.cwl -> build/bdist.linux-armv7l/wheel/biobb_adapters/cwl/biobb_md 2021-10-30T07:59:58,394 creating build/bdist.linux-armv7l/wheel/biobb_adapters/cwl/biobb_md/gromacs 2021-10-30T07:59:58,396 copying build/lib/biobb_adapters/cwl/biobb_md/gromacs/pdb2gmx.cwl -> build/bdist.linux-armv7l/wheel/biobb_adapters/cwl/biobb_md/gromacs 2021-10-30T07:59:58,402 copying build/lib/biobb_adapters/cwl/biobb_md/gromacs/genion.cwl -> build/bdist.linux-armv7l/wheel/biobb_adapters/cwl/biobb_md/gromacs 2021-10-30T07:59:58,408 copying build/lib/biobb_adapters/cwl/biobb_md/gromacs/make_ndx.cwl -> build/bdist.linux-armv7l/wheel/biobb_adapters/cwl/biobb_md/gromacs 2021-10-30T07:59:58,414 copying build/lib/biobb_adapters/cwl/biobb_md/gromacs/editconf.cwl -> build/bdist.linux-armv7l/wheel/biobb_adapters/cwl/biobb_md/gromacs 2021-10-30T07:59:58,419 copying build/lib/biobb_adapters/cwl/biobb_md/gromacs/mdrun.cwl -> build/bdist.linux-armv7l/wheel/biobb_adapters/cwl/biobb_md/gromacs 2021-10-30T07:59:58,425 copying build/lib/biobb_adapters/cwl/biobb_md/gromacs/genrestr.cwl -> build/bdist.linux-armv7l/wheel/biobb_adapters/cwl/biobb_md/gromacs 2021-10-30T07:59:58,430 copying build/lib/biobb_adapters/cwl/biobb_md/gromacs/grompp.cwl -> build/bdist.linux-armv7l/wheel/biobb_adapters/cwl/biobb_md/gromacs 2021-10-30T07:59:58,436 copying build/lib/biobb_adapters/cwl/biobb_md/gromacs/solvate.cwl -> build/bdist.linux-armv7l/wheel/biobb_adapters/cwl/biobb_md/gromacs 2021-10-30T07:59:58,442 copying build/lib/biobb_adapters/cwl/biobb_md/grompp_mdrun.cwl -> build/bdist.linux-armv7l/wheel/biobb_adapters/cwl/biobb_md 2021-10-30T07:59:58,448 copying build/lib/biobb_adapters/cwl/biobb_md/genion.cwl -> build/bdist.linux-armv7l/wheel/biobb_adapters/cwl/biobb_md 2021-10-30T07:59:58,454 copying build/lib/biobb_adapters/cwl/biobb_md/make_ndx.cwl -> build/bdist.linux-armv7l/wheel/biobb_adapters/cwl/biobb_md 2021-10-30T07:59:58,461 creating build/bdist.linux-armv7l/wheel/biobb_adapters/cwl/biobb_md/gromacs_extra 2021-10-30T07:59:58,464 copying build/lib/biobb_adapters/cwl/biobb_md/gromacs_extra/ndx2resttop.cwl -> build/bdist.linux-armv7l/wheel/biobb_adapters/cwl/biobb_md/gromacs_extra 2021-10-30T07:59:58,471 creating build/bdist.linux-armv7l/wheel/biobb_adapters/cwl/biobb_md/test 2021-10-30T07:59:58,475 creating build/bdist.linux-armv7l/wheel/biobb_adapters/cwl/biobb_md/test/gromacs 2021-10-30T07:59:58,479 copying build/lib/biobb_adapters/cwl/biobb_md/test/gromacs/editconf.yml -> build/bdist.linux-armv7l/wheel/biobb_adapters/cwl/biobb_md/test/gromacs 2021-10-30T07:59:58,485 copying build/lib/biobb_adapters/cwl/biobb_md/test/gromacs/genion.yml -> build/bdist.linux-armv7l/wheel/biobb_adapters/cwl/biobb_md/test/gromacs 2021-10-30T07:59:58,491 copying build/lib/biobb_adapters/cwl/biobb_md/test/gromacs/pdb2gmx.yml -> build/bdist.linux-armv7l/wheel/biobb_adapters/cwl/biobb_md/test/gromacs 2021-10-30T07:59:58,497 copying build/lib/biobb_adapters/cwl/biobb_md/test/gromacs/solvate.yml -> build/bdist.linux-armv7l/wheel/biobb_adapters/cwl/biobb_md/test/gromacs 2021-10-30T07:59:58,503 copying build/lib/biobb_adapters/cwl/biobb_md/test/gromacs/grompp.yml -> build/bdist.linux-armv7l/wheel/biobb_adapters/cwl/biobb_md/test/gromacs 2021-10-30T07:59:58,508 copying build/lib/biobb_adapters/cwl/biobb_md/test/gromacs/genrestr.yml -> build/bdist.linux-armv7l/wheel/biobb_adapters/cwl/biobb_md/test/gromacs 2021-10-30T07:59:58,514 copying build/lib/biobb_adapters/cwl/biobb_md/test/gromacs/mdrun.yml -> build/bdist.linux-armv7l/wheel/biobb_adapters/cwl/biobb_md/test/gromacs 2021-10-30T07:59:58,519 copying build/lib/biobb_adapters/cwl/biobb_md/test/gromacs/make_ndx.yml -> build/bdist.linux-armv7l/wheel/biobb_adapters/cwl/biobb_md/test/gromacs 2021-10-30T07:59:58,526 creating build/bdist.linux-armv7l/wheel/biobb_adapters/cwl/biobb_md/test/gromacs_extra 2021-10-30T07:59:58,529 copying build/lib/biobb_adapters/cwl/biobb_md/test/gromacs_extra/ndx2resttop.yml -> build/bdist.linux-armv7l/wheel/biobb_adapters/cwl/biobb_md/test/gromacs_extra 2021-10-30T07:59:58,535 copying build/lib/biobb_adapters/cwl/biobb_md/test/cwl_unitest.sh -> build/bdist.linux-armv7l/wheel/biobb_adapters/cwl/biobb_md/test 2021-10-30T07:59:58,542 creating build/bdist.linux-armv7l/wheel/biobb_adapters/cwl/biobb_md/test/data 2021-10-30T07:59:58,546 creating build/bdist.linux-armv7l/wheel/biobb_adapters/cwl/biobb_md/test/data/gromacs 2021-10-30T07:59:58,549 copying build/lib/biobb_adapters/cwl/biobb_md/test/data/gromacs/grompp.zip -> build/bdist.linux-armv7l/wheel/biobb_adapters/cwl/biobb_md/test/data/gromacs 2021-10-30T07:59:58,592 copying build/lib/biobb_adapters/cwl/biobb_md/test/data/gromacs/grompp.gro -> build/bdist.linux-armv7l/wheel/biobb_adapters/cwl/biobb_md/test/data/gromacs 2021-10-30T07:59:58,906 copying build/lib/biobb_adapters/cwl/biobb_md/test/data/gromacs/mdrun.tpr -> build/bdist.linux-armv7l/wheel/biobb_adapters/cwl/biobb_md/test/data/gromacs 2021-10-30T07:59:59,103 copying build/lib/biobb_adapters/cwl/biobb_md/test/data/gromacs/cluster.gro -> build/bdist.linux-armv7l/wheel/biobb_adapters/cwl/biobb_md/test/data/gromacs 2021-10-30T07:59:59,570 copying build/lib/biobb_adapters/cwl/biobb_md/test/data/gromacs/rms.gro -> build/bdist.linux-armv7l/wheel/biobb_adapters/cwl/biobb_md/test/data/gromacs 2021-10-30T07:59:59,873 copying build/lib/biobb_adapters/cwl/biobb_md/test/data/gromacs/pyruvate_kinase.pdb -> build/bdist.linux-armv7l/wheel/biobb_adapters/cwl/biobb_md/test/data/gromacs 2021-10-30T08:00:00,107 copying build/lib/biobb_adapters/cwl/biobb_md/test/data/gromacs/genrestr.ndx -> build/bdist.linux-armv7l/wheel/biobb_adapters/cwl/biobb_md/test/data/gromacs 2021-10-30T08:00:00,192 copying build/lib/biobb_adapters/cwl/biobb_md/test/data/gromacs/genion.zip -> build/bdist.linux-armv7l/wheel/biobb_adapters/cwl/biobb_md/test/data/gromacs 2021-10-30T08:00:00,232 copying build/lib/biobb_adapters/cwl/biobb_md/test/data/gromacs/editconf.gro -> build/bdist.linux-armv7l/wheel/biobb_adapters/cwl/biobb_md/test/data/gromacs 2021-10-30T08:00:00,244 copying build/lib/biobb_adapters/cwl/biobb_md/test/data/gromacs/rms.trr -> build/bdist.linux-armv7l/wheel/biobb_adapters/cwl/biobb_md/test/data/gromacs 2021-10-30T08:00:00,565 copying build/lib/biobb_adapters/cwl/biobb_md/test/data/gromacs/cluster.trr -> build/bdist.linux-armv7l/wheel/biobb_adapters/cwl/biobb_md/test/data/gromacs 2021-10-30T08:00:00,885 copying build/lib/biobb_adapters/cwl/biobb_md/test/data/gromacs/genion.tpr -> build/bdist.linux-armv7l/wheel/biobb_adapters/cwl/biobb_md/test/data/gromacs 2021-10-30T08:00:01,085 copying build/lib/biobb_adapters/cwl/biobb_md/test/data/gromacs/solvate.zip -> build/bdist.linux-armv7l/wheel/biobb_adapters/cwl/biobb_md/test/data/gromacs 2021-10-30T08:00:01,128 copying build/lib/biobb_adapters/cwl/biobb_md/test/data/gromacs/genrestr.zip -> build/bdist.linux-armv7l/wheel/biobb_adapters/cwl/biobb_md/test/data/gromacs 2021-10-30T08:00:01,170 copying build/lib/biobb_adapters/cwl/biobb_md/test/data/gromacs/make_ndx.tpr -> build/bdist.linux-armv7l/wheel/biobb_adapters/cwl/biobb_md/test/data/gromacs 2021-10-30T08:00:01,932 copying build/lib/biobb_adapters/cwl/biobb_md/test/data/gromacs/solvate.gro -> build/bdist.linux-armv7l/wheel/biobb_adapters/cwl/biobb_md/test/data/gromacs 2021-10-30T08:00:01,942 copying build/lib/biobb_adapters/cwl/biobb_md/test/data/gromacs/genrestr.gro -> build/bdist.linux-armv7l/wheel/biobb_adapters/cwl/biobb_md/test/data/gromacs 2021-10-30T08:00:02,244 creating build/bdist.linux-armv7l/wheel/biobb_adapters/cwl/biobb_md/test/data/gromacs_extra 2021-10-30T08:00:02,247 copying build/lib/biobb_adapters/cwl/biobb_md/test/data/gromacs_extra/ndx2resttop.zip -> build/bdist.linux-armv7l/wheel/biobb_adapters/cwl/biobb_md/test/data/gromacs_extra 2021-10-30T08:00:03,141 copying build/lib/biobb_adapters/cwl/biobb_md/test/data/gromacs_extra/ndx2resttop.ndx -> build/bdist.linux-armv7l/wheel/biobb_adapters/cwl/biobb_md/test/data/gromacs_extra 2021-10-30T08:00:04,451 copying build/lib/biobb_adapters/cwl/biobb_md/gmxselect.cwl -> build/bdist.linux-armv7l/wheel/biobb_adapters/cwl/biobb_md 2021-10-30T08:00:04,455 copying build/lib/biobb_adapters/cwl/biobb_md/append_ligand.cwl -> build/bdist.linux-armv7l/wheel/biobb_adapters/cwl/biobb_md 2021-10-30T08:00:04,460 copying build/lib/biobb_adapters/cwl/biobb_md/editconf.cwl -> build/bdist.linux-armv7l/wheel/biobb_adapters/cwl/biobb_md 2021-10-30T08:00:04,464 copying build/lib/biobb_adapters/cwl/biobb_md/mdrun.cwl -> build/bdist.linux-armv7l/wheel/biobb_adapters/cwl/biobb_md 2021-10-30T08:00:04,469 copying build/lib/biobb_adapters/cwl/biobb_md/genrestr.cwl -> build/bdist.linux-armv7l/wheel/biobb_adapters/cwl/biobb_md 2021-10-30T08:00:04,475 copying build/lib/biobb_adapters/cwl/biobb_md/grompp.cwl -> build/bdist.linux-armv7l/wheel/biobb_adapters/cwl/biobb_md 2021-10-30T08:00:04,481 copying build/lib/biobb_adapters/cwl/biobb_md/solvate.cwl -> build/bdist.linux-armv7l/wheel/biobb_adapters/cwl/biobb_md 2021-10-30T08:00:04,487 copying build/lib/biobb_adapters/cwl/biobb_md/ndx2resttop.cwl -> build/bdist.linux-armv7l/wheel/biobb_adapters/cwl/biobb_md 2021-10-30T08:00:04,494 creating build/bdist.linux-armv7l/wheel/biobb_adapters/cwl/biobb_model 2021-10-30T08:00:04,497 copying build/lib/biobb_adapters/cwl/biobb_model/mutate.cwl -> build/bdist.linux-armv7l/wheel/biobb_adapters/cwl/biobb_model 2021-10-30T08:00:04,502 copying build/lib/biobb_adapters/cwl/biobb_model/fix_chirality.cwl -> build/bdist.linux-armv7l/wheel/biobb_adapters/cwl/biobb_model 2021-10-30T08:00:04,508 copying build/lib/biobb_adapters/cwl/biobb_model/fix_side_chain.cwl -> build/bdist.linux-armv7l/wheel/biobb_adapters/cwl/biobb_model 2021-10-30T08:00:04,514 creating build/bdist.linux-armv7l/wheel/biobb_adapters/cwl/biobb_model/test 2021-10-30T08:00:04,517 creating build/bdist.linux-armv7l/wheel/biobb_adapters/cwl/biobb_model/test/model 2021-10-30T08:00:04,519 copying build/lib/biobb_adapters/cwl/biobb_model/test/model/mutate.yml -> build/bdist.linux-armv7l/wheel/biobb_adapters/cwl/biobb_model/test/model 2021-10-30T08:00:04,523 copying build/lib/biobb_adapters/cwl/biobb_model/test/model/fix_side_chain.yml -> build/bdist.linux-armv7l/wheel/biobb_adapters/cwl/biobb_model/test/model 2021-10-30T08:00:04,527 copying build/lib/biobb_adapters/cwl/biobb_model/test/cwl_unitest.sh -> build/bdist.linux-armv7l/wheel/biobb_adapters/cwl/biobb_model/test 2021-10-30T08:00:04,532 creating build/bdist.linux-armv7l/wheel/biobb_adapters/cwl/biobb_model/test/data 2021-10-30T08:00:04,536 creating build/bdist.linux-armv7l/wheel/biobb_adapters/cwl/biobb_model/test/data/model 2021-10-30T08:00:04,538 copying build/lib/biobb_adapters/cwl/biobb_model/test/data/model/2ki5.pdb -> build/bdist.linux-armv7l/wheel/biobb_adapters/cwl/biobb_model/test/data/model 2021-10-30T08:00:04,589 copying build/lib/biobb_adapters/cwl/biobb_model/fix_backbone.cwl -> build/bdist.linux-armv7l/wheel/biobb_adapters/cwl/biobb_model 2021-10-30T08:00:04,596 copying build/lib/biobb_adapters/cwl/biobb_model/checking_log.cwl -> build/bdist.linux-armv7l/wheel/biobb_adapters/cwl/biobb_model 2021-10-30T08:00:04,604 creating build/bdist.linux-armv7l/wheel/biobb_adapters/cwl/biobb_model/model 2021-10-30T08:00:04,608 copying build/lib/biobb_adapters/cwl/biobb_model/model/mutate.cwl -> build/bdist.linux-armv7l/wheel/biobb_adapters/cwl/biobb_model/model 2021-10-30T08:00:04,615 copying build/lib/biobb_adapters/cwl/biobb_model/model/fix_chirality.cwl -> build/bdist.linux-armv7l/wheel/biobb_adapters/cwl/biobb_model/model 2021-10-30T08:00:04,620 copying build/lib/biobb_adapters/cwl/biobb_model/model/fix_side_chain.cwl -> build/bdist.linux-armv7l/wheel/biobb_adapters/cwl/biobb_model/model 2021-10-30T08:00:04,625 copying build/lib/biobb_adapters/cwl/biobb_model/model/fix_backbone.cwl -> build/bdist.linux-armv7l/wheel/biobb_adapters/cwl/biobb_model/model 2021-10-30T08:00:04,630 copying build/lib/biobb_adapters/cwl/biobb_model/model/checking_log.cwl -> build/bdist.linux-armv7l/wheel/biobb_adapters/cwl/biobb_model/model 2021-10-30T08:00:04,636 copying build/lib/biobb_adapters/cwl/biobb_model/model/fix_amides.cwl -> build/bdist.linux-armv7l/wheel/biobb_adapters/cwl/biobb_model/model 2021-10-30T08:00:04,643 copying build/lib/biobb_adapters/cwl/biobb_model/fix_amides.cwl -> build/bdist.linux-armv7l/wheel/biobb_adapters/cwl/biobb_model 2021-10-30T08:00:04,653 creating build/bdist.linux-armv7l/wheel/biobb_adapters/cwl/biobb_analysis 2021-10-30T08:00:04,658 creating build/bdist.linux-armv7l/wheel/biobb_adapters/cwl/biobb_analysis/gromacs 2021-10-30T08:00:04,661 copying build/lib/biobb_adapters/cwl/biobb_analysis/gromacs/gmx_rgyr.cwl -> build/bdist.linux-armv7l/wheel/biobb_adapters/cwl/biobb_analysis/gromacs 2021-10-30T08:00:04,666 copying build/lib/biobb_adapters/cwl/biobb_analysis/gromacs/gmx_trjconv_str.cwl -> build/bdist.linux-armv7l/wheel/biobb_adapters/cwl/biobb_analysis/gromacs 2021-10-30T08:00:04,671 copying build/lib/biobb_adapters/cwl/biobb_analysis/gromacs/gmx_trjconv_trj.cwl -> build/bdist.linux-armv7l/wheel/biobb_adapters/cwl/biobb_analysis/gromacs 2021-10-30T08:00:04,677 copying build/lib/biobb_adapters/cwl/biobb_analysis/gromacs/gmx_trjconv_str_ens.cwl -> build/bdist.linux-armv7l/wheel/biobb_adapters/cwl/biobb_analysis/gromacs 2021-10-30T08:00:04,684 copying build/lib/biobb_adapters/cwl/biobb_analysis/gromacs/gmx_cluster.cwl -> build/bdist.linux-armv7l/wheel/biobb_adapters/cwl/biobb_analysis/gromacs 2021-10-30T08:00:04,691 copying build/lib/biobb_adapters/cwl/biobb_analysis/gromacs/gmx_rms.cwl -> build/bdist.linux-armv7l/wheel/biobb_adapters/cwl/biobb_analysis/gromacs 2021-10-30T08:00:04,697 copying build/lib/biobb_adapters/cwl/biobb_analysis/gromacs/gmx_image.cwl -> build/bdist.linux-armv7l/wheel/biobb_adapters/cwl/biobb_analysis/gromacs 2021-10-30T08:00:04,703 copying build/lib/biobb_adapters/cwl/biobb_analysis/gromacs/gmx_energy.cwl -> build/bdist.linux-armv7l/wheel/biobb_adapters/cwl/biobb_analysis/gromacs 2021-10-30T08:00:04,708 copying build/lib/biobb_adapters/cwl/biobb_analysis/cpptraj_bfactor.cwl -> build/bdist.linux-armv7l/wheel/biobb_adapters/cwl/biobb_analysis 2021-10-30T08:00:04,714 copying build/lib/biobb_adapters/cwl/biobb_analysis/cpptraj_convert.cwl -> build/bdist.linux-armv7l/wheel/biobb_adapters/cwl/biobb_analysis 2021-10-30T08:00:04,720 copying build/lib/biobb_adapters/cwl/biobb_analysis/cpptraj_snapshot.cwl -> build/bdist.linux-armv7l/wheel/biobb_adapters/cwl/biobb_analysis 2021-10-30T08:00:04,727 copying build/lib/biobb_adapters/cwl/biobb_analysis/gmx_rgyr.cwl -> build/bdist.linux-armv7l/wheel/biobb_adapters/cwl/biobb_analysis 2021-10-30T08:00:04,735 copying build/lib/biobb_adapters/cwl/biobb_analysis/cpptraj_slice.cwl -> build/bdist.linux-armv7l/wheel/biobb_adapters/cwl/biobb_analysis 2021-10-30T08:00:04,740 copying build/lib/biobb_adapters/cwl/biobb_analysis/cpptraj_rmsf.cwl -> build/bdist.linux-armv7l/wheel/biobb_adapters/cwl/biobb_analysis 2021-10-30T08:00:04,746 copying build/lib/biobb_adapters/cwl/biobb_analysis/gmx_trjconv_str.cwl -> build/bdist.linux-armv7l/wheel/biobb_adapters/cwl/biobb_analysis 2021-10-30T08:00:04,751 copying build/lib/biobb_adapters/cwl/biobb_analysis/gmx_trjconv_trj.cwl -> build/bdist.linux-armv7l/wheel/biobb_adapters/cwl/biobb_analysis 2021-10-30T08:00:04,756 copying build/lib/biobb_adapters/cwl/biobb_analysis/gmx_trjconv_str_ens.cwl -> build/bdist.linux-armv7l/wheel/biobb_adapters/cwl/biobb_analysis 2021-10-30T08:00:04,764 copying build/lib/biobb_adapters/cwl/biobb_analysis/cpptraj_mask.cwl -> build/bdist.linux-armv7l/wheel/biobb_adapters/cwl/biobb_analysis 2021-10-30T08:00:04,771 copying build/lib/biobb_adapters/cwl/biobb_analysis/cpptraj_rgyr.cwl -> build/bdist.linux-armv7l/wheel/biobb_adapters/cwl/biobb_analysis 2021-10-30T08:00:04,778 copying build/lib/biobb_adapters/cwl/biobb_analysis/gmx_cluster.cwl -> build/bdist.linux-armv7l/wheel/biobb_adapters/cwl/biobb_analysis 2021-10-30T08:00:04,783 copying build/lib/biobb_adapters/cwl/biobb_analysis/gmx_rms.cwl -> build/bdist.linux-armv7l/wheel/biobb_adapters/cwl/biobb_analysis 2021-10-30T08:00:04,788 copying build/lib/biobb_adapters/cwl/biobb_analysis/cpptraj_average.cwl -> build/bdist.linux-armv7l/wheel/biobb_adapters/cwl/biobb_analysis 2021-10-30T08:00:04,792 copying build/lib/biobb_adapters/cwl/biobb_analysis/cpptraj_dry.cwl -> build/bdist.linux-armv7l/wheel/biobb_adapters/cwl/biobb_analysis 2021-10-30T08:00:04,798 creating build/bdist.linux-armv7l/wheel/biobb_adapters/cwl/biobb_analysis/test 2021-10-30T08:00:04,803 creating build/bdist.linux-armv7l/wheel/biobb_adapters/cwl/biobb_analysis/test/gromacs 2021-10-30T08:00:04,806 copying build/lib/biobb_adapters/cwl/biobb_analysis/test/gromacs/gmx_cluster.yml -> build/bdist.linux-armv7l/wheel/biobb_adapters/cwl/biobb_analysis/test/gromacs 2021-10-30T08:00:04,812 copying build/lib/biobb_adapters/cwl/biobb_analysis/test/gromacs/gmx_image.yml -> build/bdist.linux-armv7l/wheel/biobb_adapters/cwl/biobb_analysis/test/gromacs 2021-10-30T08:00:04,817 copying build/lib/biobb_adapters/cwl/biobb_analysis/test/gromacs/gmx_energy.yml -> build/bdist.linux-armv7l/wheel/biobb_adapters/cwl/biobb_analysis/test/gromacs 2021-10-30T08:00:04,821 copying build/lib/biobb_adapters/cwl/biobb_analysis/test/gromacs/gmx_rms.yml -> build/bdist.linux-armv7l/wheel/biobb_adapters/cwl/biobb_analysis/test/gromacs 2021-10-30T08:00:04,825 copying build/lib/biobb_adapters/cwl/biobb_analysis/test/gromacs/gmx_trjconv_str.yml -> build/bdist.linux-armv7l/wheel/biobb_adapters/cwl/biobb_analysis/test/gromacs 2021-10-30T08:00:04,829 copying build/lib/biobb_adapters/cwl/biobb_analysis/test/gromacs/gmx_trjconv_trj.yml -> build/bdist.linux-armv7l/wheel/biobb_adapters/cwl/biobb_analysis/test/gromacs 2021-10-30T08:00:04,833 copying build/lib/biobb_adapters/cwl/biobb_analysis/test/gromacs/gmx_trjconv_str_ens.yml -> build/bdist.linux-armv7l/wheel/biobb_adapters/cwl/biobb_analysis/test/gromacs 2021-10-30T08:00:04,837 copying build/lib/biobb_adapters/cwl/biobb_analysis/test/gromacs/gmx_rgyr.yml -> build/bdist.linux-armv7l/wheel/biobb_adapters/cwl/biobb_analysis/test/gromacs 2021-10-30T08:00:04,844 creating build/bdist.linux-armv7l/wheel/biobb_adapters/cwl/biobb_analysis/test/ambertools 2021-10-30T08:00:04,846 copying build/lib/biobb_adapters/cwl/biobb_analysis/test/ambertools/cpptraj_rgyr.yml -> build/bdist.linux-armv7l/wheel/biobb_adapters/cwl/biobb_analysis/test/ambertools 2021-10-30T08:00:04,852 copying build/lib/biobb_adapters/cwl/biobb_analysis/test/ambertools/cpptraj_convert.yml -> build/bdist.linux-armv7l/wheel/biobb_adapters/cwl/biobb_analysis/test/ambertools 2021-10-30T08:00:04,858 copying build/lib/biobb_adapters/cwl/biobb_analysis/test/ambertools/cpptraj_dry.yml -> build/bdist.linux-armv7l/wheel/biobb_adapters/cwl/biobb_analysis/test/ambertools 2021-10-30T08:00:04,863 copying build/lib/biobb_adapters/cwl/biobb_analysis/test/ambertools/cpptraj_average.yml -> build/bdist.linux-armv7l/wheel/biobb_adapters/cwl/biobb_analysis/test/ambertools 2021-10-30T08:00:04,869 copying build/lib/biobb_adapters/cwl/biobb_analysis/test/ambertools/cpptraj_strip.yml -> build/bdist.linux-armv7l/wheel/biobb_adapters/cwl/biobb_analysis/test/ambertools 2021-10-30T08:00:04,874 copying build/lib/biobb_adapters/cwl/biobb_analysis/test/ambertools/cpptraj_slice.yml -> build/bdist.linux-armv7l/wheel/biobb_adapters/cwl/biobb_analysis/test/ambertools 2021-10-30T08:00:04,880 copying build/lib/biobb_adapters/cwl/biobb_analysis/test/ambertools/cpptraj_bfactor.yml -> build/bdist.linux-armv7l/wheel/biobb_adapters/cwl/biobb_analysis/test/ambertools 2021-10-30T08:00:04,885 copying build/lib/biobb_adapters/cwl/biobb_analysis/test/ambertools/cpptraj_image.yml -> build/bdist.linux-armv7l/wheel/biobb_adapters/cwl/biobb_analysis/test/ambertools 2021-10-30T08:00:04,891 copying build/lib/biobb_adapters/cwl/biobb_analysis/test/ambertools/cpptraj_mask.yml -> build/bdist.linux-armv7l/wheel/biobb_adapters/cwl/biobb_analysis/test/ambertools 2021-10-30T08:00:04,897 copying build/lib/biobb_adapters/cwl/biobb_analysis/test/ambertools/cpptraj_rmsf.yml -> build/bdist.linux-armv7l/wheel/biobb_adapters/cwl/biobb_analysis/test/ambertools 2021-10-30T08:00:04,901 copying build/lib/biobb_adapters/cwl/biobb_analysis/test/ambertools/cpptraj_rms.yml -> build/bdist.linux-armv7l/wheel/biobb_adapters/cwl/biobb_analysis/test/ambertools 2021-10-30T08:00:04,905 copying build/lib/biobb_adapters/cwl/biobb_analysis/test/ambertools/cpptraj_snapshot.yml -> build/bdist.linux-armv7l/wheel/biobb_adapters/cwl/biobb_analysis/test/ambertools 2021-10-30T08:00:04,909 copying build/lib/biobb_adapters/cwl/biobb_analysis/test/cwl_unitest.sh -> build/bdist.linux-armv7l/wheel/biobb_adapters/cwl/biobb_analysis/test 2021-10-30T08:00:04,914 creating build/bdist.linux-armv7l/wheel/biobb_adapters/cwl/biobb_analysis/test/data 2021-10-30T08:00:04,917 creating build/bdist.linux-armv7l/wheel/biobb_adapters/cwl/biobb_analysis/test/data/gromacs 2021-10-30T08:00:04,920 copying build/lib/biobb_adapters/cwl/biobb_analysis/test/data/gromacs/topology.tpr -> build/bdist.linux-armv7l/wheel/biobb_adapters/cwl/biobb_analysis/test/data/gromacs 2021-10-30T08:00:05,024 copying build/lib/biobb_adapters/cwl/biobb_analysis/test/data/gromacs/trajectory.trr -> build/bdist.linux-armv7l/wheel/biobb_adapters/cwl/biobb_analysis/test/data/gromacs 2021-10-30T08:00:05,742 copying build/lib/biobb_adapters/cwl/biobb_analysis/test/data/gromacs/energy.edr -> build/bdist.linux-armv7l/wheel/biobb_adapters/cwl/biobb_analysis/test/data/gromacs 2021-10-30T08:00:05,749 creating build/bdist.linux-armv7l/wheel/biobb_adapters/cwl/biobb_analysis/test/data/ambertools 2021-10-30T08:00:05,752 copying build/lib/biobb_adapters/cwl/biobb_analysis/test/data/ambertools/cpptraj.parm.top -> build/bdist.linux-armv7l/wheel/biobb_adapters/cwl/biobb_analysis/test/data/ambertools 2021-10-30T08:00:06,156 copying build/lib/biobb_adapters/cwl/biobb_analysis/test/data/ambertools/cpptraj.traj.dcd -> build/bdist.linux-armv7l/wheel/biobb_adapters/cwl/biobb_analysis/test/data/ambertools 2021-10-30T08:00:06,784 copying build/lib/biobb_adapters/cwl/biobb_analysis/cpptraj_strip.cwl -> build/bdist.linux-armv7l/wheel/biobb_adapters/cwl/biobb_analysis 2021-10-30T08:00:06,791 creating build/bdist.linux-armv7l/wheel/biobb_adapters/cwl/biobb_analysis/ambertools 2021-10-30T08:00:06,794 copying build/lib/biobb_adapters/cwl/biobb_analysis/ambertools/cpptraj_bfactor.cwl -> build/bdist.linux-armv7l/wheel/biobb_adapters/cwl/biobb_analysis/ambertools 2021-10-30T08:00:06,800 copying build/lib/biobb_adapters/cwl/biobb_analysis/ambertools/cpptraj_convert.cwl -> build/bdist.linux-armv7l/wheel/biobb_adapters/cwl/biobb_analysis/ambertools 2021-10-30T08:00:06,806 copying build/lib/biobb_adapters/cwl/biobb_analysis/ambertools/cpptraj_snapshot.cwl -> build/bdist.linux-armv7l/wheel/biobb_adapters/cwl/biobb_analysis/ambertools 2021-10-30T08:00:06,810 copying build/lib/biobb_adapters/cwl/biobb_analysis/ambertools/cpptraj_slice.cwl -> build/bdist.linux-armv7l/wheel/biobb_adapters/cwl/biobb_analysis/ambertools 2021-10-30T08:00:06,815 copying build/lib/biobb_adapters/cwl/biobb_analysis/ambertools/cpptraj_rmsf.cwl -> build/bdist.linux-armv7l/wheel/biobb_adapters/cwl/biobb_analysis/ambertools 2021-10-30T08:00:06,819 copying build/lib/biobb_adapters/cwl/biobb_analysis/ambertools/cpptraj_mask.cwl -> build/bdist.linux-armv7l/wheel/biobb_adapters/cwl/biobb_analysis/ambertools 2021-10-30T08:00:06,823 copying build/lib/biobb_adapters/cwl/biobb_analysis/ambertools/cpptraj_rgyr.cwl -> build/bdist.linux-armv7l/wheel/biobb_adapters/cwl/biobb_analysis/ambertools 2021-10-30T08:00:06,827 copying build/lib/biobb_adapters/cwl/biobb_analysis/ambertools/cpptraj_average.cwl -> build/bdist.linux-armv7l/wheel/biobb_adapters/cwl/biobb_analysis/ambertools 2021-10-30T08:00:06,833 copying build/lib/biobb_adapters/cwl/biobb_analysis/ambertools/cpptraj_dry.cwl -> build/bdist.linux-armv7l/wheel/biobb_adapters/cwl/biobb_analysis/ambertools 2021-10-30T08:00:06,839 copying build/lib/biobb_adapters/cwl/biobb_analysis/ambertools/cpptraj_strip.cwl -> build/bdist.linux-armv7l/wheel/biobb_adapters/cwl/biobb_analysis/ambertools 2021-10-30T08:00:06,845 copying build/lib/biobb_adapters/cwl/biobb_analysis/ambertools/cpptraj_image.cwl -> build/bdist.linux-armv7l/wheel/biobb_adapters/cwl/biobb_analysis/ambertools 2021-10-30T08:00:06,850 copying build/lib/biobb_adapters/cwl/biobb_analysis/ambertools/cpptraj_rms.cwl -> build/bdist.linux-armv7l/wheel/biobb_adapters/cwl/biobb_analysis/ambertools 2021-10-30T08:00:06,854 copying build/lib/biobb_adapters/cwl/biobb_analysis/cpptraj_image.cwl -> build/bdist.linux-armv7l/wheel/biobb_adapters/cwl/biobb_analysis 2021-10-30T08:00:06,858 copying build/lib/biobb_adapters/cwl/biobb_analysis/gmx_image.cwl -> build/bdist.linux-armv7l/wheel/biobb_adapters/cwl/biobb_analysis 2021-10-30T08:00:06,862 copying build/lib/biobb_adapters/cwl/biobb_analysis/gmx_energy.cwl -> build/bdist.linux-armv7l/wheel/biobb_adapters/cwl/biobb_analysis 2021-10-30T08:00:06,866 copying build/lib/biobb_adapters/cwl/biobb_analysis/cpptraj_rms.cwl -> build/bdist.linux-armv7l/wheel/biobb_adapters/cwl/biobb_analysis 2021-10-30T08:00:06,874 creating build/bdist.linux-armv7l/wheel/biobb_adapters/cwl/biobb_structure_utils 2021-10-30T08:00:06,877 copying build/lib/biobb_adapters/cwl/biobb_structure_utils/sort_gro_residues.cwl -> build/bdist.linux-armv7l/wheel/biobb_adapters/cwl/biobb_structure_utils 2021-10-30T08:00:06,884 creating build/bdist.linux-armv7l/wheel/biobb_adapters/cwl/biobb_structure_utils/utils 2021-10-30T08:00:06,887 copying build/lib/biobb_adapters/cwl/biobb_structure_utils/utils/sort_gro_residues.cwl -> build/bdist.linux-armv7l/wheel/biobb_adapters/cwl/biobb_structure_utils/utils 2021-10-30T08:00:06,892 copying build/lib/biobb_adapters/cwl/biobb_structure_utils/utils/renumber_structure.cwl -> build/bdist.linux-armv7l/wheel/biobb_adapters/cwl/biobb_structure_utils/utils 2021-10-30T08:00:06,896 copying build/lib/biobb_adapters/cwl/biobb_structure_utils/utils/extract_protein.cwl -> build/bdist.linux-armv7l/wheel/biobb_adapters/cwl/biobb_structure_utils/utils 2021-10-30T08:00:06,900 copying build/lib/biobb_adapters/cwl/biobb_structure_utils/utils/remove_pdb_water.cwl -> build/bdist.linux-armv7l/wheel/biobb_adapters/cwl/biobb_structure_utils/utils 2021-10-30T08:00:06,904 copying build/lib/biobb_adapters/cwl/biobb_structure_utils/utils/extract_model.cwl -> build/bdist.linux-armv7l/wheel/biobb_adapters/cwl/biobb_structure_utils/utils 2021-10-30T08:00:06,908 copying build/lib/biobb_adapters/cwl/biobb_structure_utils/utils/structure_check.cwl -> build/bdist.linux-armv7l/wheel/biobb_adapters/cwl/biobb_structure_utils/utils 2021-10-30T08:00:06,914 copying build/lib/biobb_adapters/cwl/biobb_structure_utils/utils/remove_ligand.cwl -> build/bdist.linux-armv7l/wheel/biobb_adapters/cwl/biobb_structure_utils/utils 2021-10-30T08:00:06,919 copying build/lib/biobb_adapters/cwl/biobb_structure_utils/utils/extract_atoms.cwl -> build/bdist.linux-armv7l/wheel/biobb_adapters/cwl/biobb_structure_utils/utils 2021-10-30T08:00:06,925 copying build/lib/biobb_adapters/cwl/biobb_structure_utils/utils/extract_chain.cwl -> build/bdist.linux-armv7l/wheel/biobb_adapters/cwl/biobb_structure_utils/utils 2021-10-30T08:00:06,930 copying build/lib/biobb_adapters/cwl/biobb_structure_utils/utils/cat_pdb.cwl -> build/bdist.linux-armv7l/wheel/biobb_adapters/cwl/biobb_structure_utils/utils 2021-10-30T08:00:06,934 copying build/lib/biobb_adapters/cwl/biobb_structure_utils/utils/str_check_add_hydrogens.cwl -> build/bdist.linux-armv7l/wheel/biobb_adapters/cwl/biobb_structure_utils/utils 2021-10-30T08:00:06,938 copying build/lib/biobb_adapters/cwl/biobb_structure_utils/utils/extract_heteroatoms.cwl -> build/bdist.linux-armv7l/wheel/biobb_adapters/cwl/biobb_structure_utils/utils 2021-10-30T08:00:06,942 copying build/lib/biobb_adapters/cwl/biobb_structure_utils/renumber_structure.cwl -> build/bdist.linux-armv7l/wheel/biobb_adapters/cwl/biobb_structure_utils 2021-10-30T08:00:06,946 copying build/lib/biobb_adapters/cwl/biobb_structure_utils/extract_protein.cwl -> build/bdist.linux-armv7l/wheel/biobb_adapters/cwl/biobb_structure_utils 2021-10-30T08:00:06,951 copying build/lib/biobb_adapters/cwl/biobb_structure_utils/remove_pdb_water.cwl -> build/bdist.linux-armv7l/wheel/biobb_adapters/cwl/biobb_structure_utils 2021-10-30T08:00:06,957 copying build/lib/biobb_adapters/cwl/biobb_structure_utils/extract_model.cwl -> build/bdist.linux-armv7l/wheel/biobb_adapters/cwl/biobb_structure_utils 2021-10-30T08:00:06,962 copying build/lib/biobb_adapters/cwl/biobb_structure_utils/structure_check.cwl -> build/bdist.linux-armv7l/wheel/biobb_adapters/cwl/biobb_structure_utils 2021-10-30T08:00:06,967 copying build/lib/biobb_adapters/cwl/biobb_structure_utils/remove_ligand.cwl -> build/bdist.linux-armv7l/wheel/biobb_adapters/cwl/biobb_structure_utils 2021-10-30T08:00:06,973 creating build/bdist.linux-armv7l/wheel/biobb_adapters/cwl/biobb_structure_utils/test 2021-10-30T08:00:06,976 creating build/bdist.linux-armv7l/wheel/biobb_adapters/cwl/biobb_structure_utils/test/utils 2021-10-30T08:00:06,978 copying build/lib/biobb_adapters/cwl/biobb_structure_utils/test/utils/renumber_structure.yml -> build/bdist.linux-armv7l/wheel/biobb_adapters/cwl/biobb_structure_utils/test/utils 2021-10-30T08:00:06,982 copying build/lib/biobb_adapters/cwl/biobb_structure_utils/test/utils/cat_pdb.yml -> build/bdist.linux-armv7l/wheel/biobb_adapters/cwl/biobb_structure_utils/test/utils 2021-10-30T08:00:06,986 copying build/lib/biobb_adapters/cwl/biobb_structure_utils/test/utils/extract_protein.yml -> build/bdist.linux-armv7l/wheel/biobb_adapters/cwl/biobb_structure_utils/test/utils 2021-10-30T08:00:06,990 copying build/lib/biobb_adapters/cwl/biobb_structure_utils/test/utils/extract_heteroatoms.yml -> build/bdist.linux-armv7l/wheel/biobb_adapters/cwl/biobb_structure_utils/test/utils 2021-10-30T08:00:06,996 copying build/lib/biobb_adapters/cwl/biobb_structure_utils/test/utils/remove_pdb_water.yml -> build/bdist.linux-armv7l/wheel/biobb_adapters/cwl/biobb_structure_utils/test/utils 2021-10-30T08:00:07,001 copying build/lib/biobb_adapters/cwl/biobb_structure_utils/test/utils/extract_chain.yml -> build/bdist.linux-armv7l/wheel/biobb_adapters/cwl/biobb_structure_utils/test/utils 2021-10-30T08:00:07,006 copying build/lib/biobb_adapters/cwl/biobb_structure_utils/test/utils/extract_atoms.yml -> build/bdist.linux-armv7l/wheel/biobb_adapters/cwl/biobb_structure_utils/test/utils 2021-10-30T08:00:07,011 copying build/lib/biobb_adapters/cwl/biobb_structure_utils/test/utils/remove_ligand.yml -> build/bdist.linux-armv7l/wheel/biobb_adapters/cwl/biobb_structure_utils/test/utils 2021-10-30T08:00:07,015 copying build/lib/biobb_adapters/cwl/biobb_structure_utils/test/utils/sort_gro_residues.yml -> build/bdist.linux-armv7l/wheel/biobb_adapters/cwl/biobb_structure_utils/test/utils 2021-10-30T08:00:07,019 copying build/lib/biobb_adapters/cwl/biobb_structure_utils/test/utils/extract_model.yml -> build/bdist.linux-armv7l/wheel/biobb_adapters/cwl/biobb_structure_utils/test/utils 2021-10-30T08:00:07,023 copying build/lib/biobb_adapters/cwl/biobb_structure_utils/test/cwl_unitest.sh -> build/bdist.linux-armv7l/wheel/biobb_adapters/cwl/biobb_structure_utils/test 2021-10-30T08:00:07,028 creating build/bdist.linux-armv7l/wheel/biobb_adapters/cwl/biobb_structure_utils/test/data 2021-10-30T08:00:07,030 copying build/lib/biobb_adapters/cwl/biobb_structure_utils/test/data/cat_ligand.pdb -> build/bdist.linux-armv7l/wheel/biobb_adapters/cwl/biobb_structure_utils/test/data 2021-10-30T08:00:07,036 copying build/lib/biobb_adapters/cwl/biobb_structure_utils/test/data/2vgb.pdb -> build/bdist.linux-armv7l/wheel/biobb_adapters/cwl/biobb_structure_utils/test/data 2021-10-30T08:00:07,175 copying build/lib/biobb_adapters/cwl/biobb_structure_utils/test/data/extract_heteroatom.pdb -> build/bdist.linux-armv7l/wheel/biobb_adapters/cwl/biobb_structure_utils/test/data 2021-10-30T08:00:07,537 copying build/lib/biobb_adapters/cwl/biobb_structure_utils/test/data/G2S_stateA_frame92.sorted.gro -> build/bdist.linux-armv7l/wheel/biobb_adapters/cwl/biobb_structure_utils/test/data 2021-10-30T08:00:07,901 copying build/lib/biobb_adapters/cwl/biobb_structure_utils/test/data/extract_chain.pdb -> build/bdist.linux-armv7l/wheel/biobb_adapters/cwl/biobb_structure_utils/test/data 2021-10-30T08:00:08,021 copying build/lib/biobb_adapters/cwl/biobb_structure_utils/test/data/WT_aq4_md_WAT.pdb -> build/bdist.linux-armv7l/wheel/biobb_adapters/cwl/biobb_structure_utils/test/data 2021-10-30T08:00:08,062 copying build/lib/biobb_adapters/cwl/biobb_structure_utils/test/data/smallgro.gro -> build/bdist.linux-armv7l/wheel/biobb_adapters/cwl/biobb_structure_utils/test/data 2021-10-30T08:00:08,067 copying build/lib/biobb_adapters/cwl/biobb_structure_utils/test/data/WT_aq4_md_1.pdb -> build/bdist.linux-armv7l/wheel/biobb_adapters/cwl/biobb_structure_utils/test/data 2021-10-30T08:00:08,468 copying build/lib/biobb_adapters/cwl/biobb_structure_utils/test/data/extract_protein.pdb -> build/bdist.linux-armv7l/wheel/biobb_adapters/cwl/biobb_structure_utils/test/data 2021-10-30T08:00:08,494 copying build/lib/biobb_adapters/cwl/biobb_structure_utils/test/data/WT_aq4_md_1.gro -> build/bdist.linux-armv7l/wheel/biobb_adapters/cwl/biobb_structure_utils/test/data 2021-10-30T08:00:08,854 copying build/lib/biobb_adapters/cwl/biobb_structure_utils/test/data/cl3.noH.pdb -> build/bdist.linux-armv7l/wheel/biobb_adapters/cwl/biobb_structure_utils/test/data 2021-10-30T08:00:08,858 copying build/lib/biobb_adapters/cwl/biobb_structure_utils/test/data/cat_protein.pdb -> build/bdist.linux-armv7l/wheel/biobb_adapters/cwl/biobb_structure_utils/test/data 2021-10-30T08:00:08,880 copying build/lib/biobb_adapters/cwl/biobb_structure_utils/test/data/pyruvate.gro -> build/bdist.linux-armv7l/wheel/biobb_adapters/cwl/biobb_structure_utils/test/data 2021-10-30T08:00:08,943 copying build/lib/biobb_adapters/cwl/biobb_structure_utils/test/data/extract_model.pdb -> build/bdist.linux-armv7l/wheel/biobb_adapters/cwl/biobb_structure_utils/test/data 2021-10-30T08:00:09,298 copying build/lib/biobb_adapters/cwl/biobb_structure_utils/extract_atoms.cwl -> build/bdist.linux-armv7l/wheel/biobb_adapters/cwl/biobb_structure_utils 2021-10-30T08:00:09,306 copying build/lib/biobb_adapters/cwl/biobb_structure_utils/extract_chain.cwl -> build/bdist.linux-armv7l/wheel/biobb_adapters/cwl/biobb_structure_utils 2021-10-30T08:00:09,313 copying build/lib/biobb_adapters/cwl/biobb_structure_utils/cat_pdb.cwl -> build/bdist.linux-armv7l/wheel/biobb_adapters/cwl/biobb_structure_utils 2021-10-30T08:00:09,320 copying build/lib/biobb_adapters/cwl/biobb_structure_utils/extract_molecule.cwl -> build/bdist.linux-armv7l/wheel/biobb_adapters/cwl/biobb_structure_utils 2021-10-30T08:00:09,327 copying build/lib/biobb_adapters/cwl/biobb_structure_utils/str_check_add_hydrogens.cwl -> build/bdist.linux-armv7l/wheel/biobb_adapters/cwl/biobb_structure_utils 2021-10-30T08:00:09,332 copying build/lib/biobb_adapters/cwl/biobb_structure_utils/extract_heteroatoms.cwl -> build/bdist.linux-armv7l/wheel/biobb_adapters/cwl/biobb_structure_utils 2021-10-30T08:00:09,337 copying build/lib/biobb_adapters/__init__.py -> build/bdist.linux-armv7l/wheel/biobb_adapters 2021-10-30T08:00:09,343 creating build/bdist.linux-armv7l/wheel/biobb_adapters/pycompss 2021-10-30T08:00:09,347 creating build/bdist.linux-armv7l/wheel/biobb_adapters/pycompss/biobb_cmip 2021-10-30T08:00:09,353 creating build/bdist.linux-armv7l/wheel/biobb_adapters/pycompss/biobb_cmip/cmip 2021-10-30T08:00:09,358 copying build/lib/biobb_adapters/pycompss/biobb_cmip/cmip/cmip.py -> build/bdist.linux-armv7l/wheel/biobb_adapters/pycompss/biobb_cmip/cmip 2021-10-30T08:00:09,365 copying build/lib/biobb_adapters/pycompss/biobb_cmip/cmip/__init__.py -> build/bdist.linux-armv7l/wheel/biobb_adapters/pycompss/biobb_cmip/cmip 2021-10-30T08:00:09,370 copying build/lib/biobb_adapters/pycompss/biobb_cmip/cmip/titration.py -> build/bdist.linux-armv7l/wheel/biobb_adapters/pycompss/biobb_cmip/cmip 2021-10-30T08:00:09,375 copying build/lib/biobb_adapters/pycompss/biobb_cmip/__init__.py -> build/bdist.linux-armv7l/wheel/biobb_adapters/pycompss/biobb_cmip 2021-10-30T08:00:09,380 creating build/bdist.linux-armv7l/wheel/biobb_adapters/pycompss/biobb_commons 2021-10-30T08:00:09,383 copying build/lib/biobb_adapters/pycompss/biobb_commons/__init__.py -> build/bdist.linux-armv7l/wheel/biobb_adapters/pycompss/biobb_commons 2021-10-30T08:00:09,388 copying build/lib/biobb_adapters/pycompss/biobb_commons/task_config.py -> build/bdist.linux-armv7l/wheel/biobb_adapters/pycompss/biobb_commons 2021-10-30T08:00:09,394 creating build/bdist.linux-armv7l/wheel/biobb_adapters/pycompss/biobb_io 2021-10-30T08:00:09,398 creating build/bdist.linux-armv7l/wheel/biobb_adapters/pycompss/biobb_io/api 2021-10-30T08:00:09,401 copying build/lib/biobb_adapters/pycompss/biobb_io/api/pdb_variants_pc.py -> build/bdist.linux-armv7l/wheel/biobb_adapters/pycompss/biobb_io/api 2021-10-30T08:00:09,407 copying build/lib/biobb_adapters/pycompss/biobb_io/api/mmcif.py -> build/bdist.linux-armv7l/wheel/biobb_adapters/pycompss/biobb_io/api 2021-10-30T08:00:09,414 copying build/lib/biobb_adapters/pycompss/biobb_io/api/binding_site.py -> build/bdist.linux-armv7l/wheel/biobb_adapters/pycompss/biobb_io/api 2021-10-30T08:00:09,420 copying build/lib/biobb_adapters/pycompss/biobb_io/api/api_binding_site.py -> build/bdist.linux-armv7l/wheel/biobb_adapters/pycompss/biobb_io/api 2021-10-30T08:00:09,428 copying build/lib/biobb_adapters/pycompss/biobb_io/api/pdb_cluster_zip.py -> build/bdist.linux-armv7l/wheel/biobb_adapters/pycompss/biobb_io/api 2021-10-30T08:00:09,433 copying build/lib/biobb_adapters/pycompss/biobb_io/api/pdb_variants.py -> build/bdist.linux-armv7l/wheel/biobb_adapters/pycompss/biobb_io/api 2021-10-30T08:00:09,439 copying build/lib/biobb_adapters/pycompss/biobb_io/api/ligand_pc.py -> build/bdist.linux-armv7l/wheel/biobb_adapters/pycompss/biobb_io/api 2021-10-30T08:00:09,443 copying build/lib/biobb_adapters/pycompss/biobb_io/api/drugbank.py -> build/bdist.linux-armv7l/wheel/biobb_adapters/pycompss/biobb_io/api 2021-10-30T08:00:09,449 copying build/lib/biobb_adapters/pycompss/biobb_io/api/structure_info.py -> build/bdist.linux-armv7l/wheel/biobb_adapters/pycompss/biobb_io/api 2021-10-30T08:00:09,455 copying build/lib/biobb_adapters/pycompss/biobb_io/api/canonical_fasta.py -> build/bdist.linux-armv7l/wheel/biobb_adapters/pycompss/biobb_io/api 2021-10-30T08:00:09,462 copying build/lib/biobb_adapters/pycompss/biobb_io/api/memprotmd_sim_search.py -> build/bdist.linux-armv7l/wheel/biobb_adapters/pycompss/biobb_io/api 2021-10-30T08:00:09,469 copying build/lib/biobb_adapters/pycompss/biobb_io/api/pdb_pc.py -> build/bdist.linux-armv7l/wheel/biobb_adapters/pycompss/biobb_io/api 2021-10-30T08:00:09,475 copying build/lib/biobb_adapters/pycompss/biobb_io/api/__init__.py -> build/bdist.linux-armv7l/wheel/biobb_adapters/pycompss/biobb_io/api 2021-10-30T08:00:09,479 copying build/lib/biobb_adapters/pycompss/biobb_io/api/pdb.py -> build/bdist.linux-armv7l/wheel/biobb_adapters/pycompss/biobb_io/api 2021-10-30T08:00:09,484 copying build/lib/biobb_adapters/pycompss/biobb_io/api/memprotmd_sim_list.py -> build/bdist.linux-armv7l/wheel/biobb_adapters/pycompss/biobb_io/api 2021-10-30T08:00:09,490 copying build/lib/biobb_adapters/pycompss/biobb_io/api/pdb_cluster_zip_pc.py -> build/bdist.linux-armv7l/wheel/biobb_adapters/pycompss/biobb_io/api 2021-10-30T08:00:09,496 copying build/lib/biobb_adapters/pycompss/biobb_io/api/memprotmd_sim.py -> build/bdist.linux-armv7l/wheel/biobb_adapters/pycompss/biobb_io/api 2021-10-30T08:00:09,503 copying build/lib/biobb_adapters/pycompss/biobb_io/api/ligand.py -> build/bdist.linux-armv7l/wheel/biobb_adapters/pycompss/biobb_io/api 2021-10-30T08:00:09,510 copying build/lib/biobb_adapters/pycompss/biobb_io/api/ideal_sdf.py -> build/bdist.linux-armv7l/wheel/biobb_adapters/pycompss/biobb_io/api 2021-10-30T08:00:09,516 copying build/lib/biobb_adapters/pycompss/biobb_io/__init__.py -> build/bdist.linux-armv7l/wheel/biobb_adapters/pycompss/biobb_io 2021-10-30T08:00:09,521 creating build/bdist.linux-armv7l/wheel/biobb_adapters/pycompss/biobb_vs 2021-10-30T08:00:09,525 creating build/bdist.linux-armv7l/wheel/biobb_adapters/pycompss/biobb_vs/utils 2021-10-30T08:00:09,528 copying build/lib/biobb_adapters/pycompss/biobb_vs/utils/extract_model_pdbqt.py -> build/bdist.linux-armv7l/wheel/biobb_adapters/pycompss/biobb_vs/utils 2021-10-30T08:00:09,535 copying build/lib/biobb_adapters/pycompss/biobb_vs/utils/box_residues.py -> build/bdist.linux-armv7l/wheel/biobb_adapters/pycompss/biobb_vs/utils 2021-10-30T08:00:09,542 copying build/lib/biobb_adapters/pycompss/biobb_vs/utils/box.py -> build/bdist.linux-armv7l/wheel/biobb_adapters/pycompss/biobb_vs/utils 2021-10-30T08:00:09,549 copying build/lib/biobb_adapters/pycompss/biobb_vs/utils/bindingsite.py -> build/bdist.linux-armv7l/wheel/biobb_adapters/pycompss/biobb_vs/utils 2021-10-30T08:00:09,555 copying build/lib/biobb_adapters/pycompss/biobb_vs/utils/__init__.py -> build/bdist.linux-armv7l/wheel/biobb_adapters/pycompss/biobb_vs/utils 2021-10-30T08:00:09,561 creating build/bdist.linux-armv7l/wheel/biobb_adapters/pycompss/biobb_vs/fpocket 2021-10-30T08:00:09,564 copying build/lib/biobb_adapters/pycompss/biobb_vs/fpocket/fpocket_run.py -> build/bdist.linux-armv7l/wheel/biobb_adapters/pycompss/biobb_vs/fpocket 2021-10-30T08:00:09,569 copying build/lib/biobb_adapters/pycompss/biobb_vs/fpocket/fpocket.py -> build/bdist.linux-armv7l/wheel/biobb_adapters/pycompss/biobb_vs/fpocket 2021-10-30T08:00:09,575 copying build/lib/biobb_adapters/pycompss/biobb_vs/fpocket/fpocket_filter.py -> build/bdist.linux-armv7l/wheel/biobb_adapters/pycompss/biobb_vs/fpocket 2021-10-30T08:00:09,583 copying build/lib/biobb_adapters/pycompss/biobb_vs/fpocket/__init__.py -> build/bdist.linux-armv7l/wheel/biobb_adapters/pycompss/biobb_vs/fpocket 2021-10-30T08:00:09,589 copying build/lib/biobb_adapters/pycompss/biobb_vs/fpocket/fpocket_select.py -> build/bdist.linux-armv7l/wheel/biobb_adapters/pycompss/biobb_vs/fpocket 2021-10-30T08:00:09,597 creating build/bdist.linux-armv7l/wheel/biobb_adapters/pycompss/biobb_vs/vina 2021-10-30T08:00:09,600 copying build/lib/biobb_adapters/pycompss/biobb_vs/vina/autodock_vina_run.py -> build/bdist.linux-armv7l/wheel/biobb_adapters/pycompss/biobb_vs/vina 2021-10-30T08:00:09,605 copying build/lib/biobb_adapters/pycompss/biobb_vs/vina/autodock_vina.py -> build/bdist.linux-armv7l/wheel/biobb_adapters/pycompss/biobb_vs/vina 2021-10-30T08:00:09,610 copying build/lib/biobb_adapters/pycompss/biobb_vs/vina/__init__.py -> build/bdist.linux-armv7l/wheel/biobb_adapters/pycompss/biobb_vs/vina 2021-10-30T08:00:09,615 copying build/lib/biobb_adapters/pycompss/biobb_vs/__init__.py -> build/bdist.linux-armv7l/wheel/biobb_adapters/pycompss/biobb_vs 2021-10-30T08:00:09,623 creating build/bdist.linux-armv7l/wheel/biobb_adapters/pycompss/biobb_ml 2021-10-30T08:00:09,629 creating build/bdist.linux-armv7l/wheel/biobb_adapters/pycompss/biobb_ml/clustering 2021-10-30T08:00:09,634 copying build/lib/biobb_adapters/pycompss/biobb_ml/clustering/k_means.py -> build/bdist.linux-armv7l/wheel/biobb_adapters/pycompss/biobb_ml/clustering 2021-10-30T08:00:09,640 copying build/lib/biobb_adapters/pycompss/biobb_ml/clustering/agglomerative_clustering.py -> build/bdist.linux-armv7l/wheel/biobb_adapters/pycompss/biobb_ml/clustering 2021-10-30T08:00:09,645 copying build/lib/biobb_adapters/pycompss/biobb_ml/clustering/clustering_predict.py -> build/bdist.linux-armv7l/wheel/biobb_adapters/pycompss/biobb_ml/clustering 2021-10-30T08:00:09,650 copying build/lib/biobb_adapters/pycompss/biobb_ml/clustering/agglomerative_coefficient.py -> build/bdist.linux-armv7l/wheel/biobb_adapters/pycompss/biobb_ml/clustering 2021-10-30T08:00:09,655 copying build/lib/biobb_adapters/pycompss/biobb_ml/clustering/spectral_coefficient.py -> build/bdist.linux-armv7l/wheel/biobb_adapters/pycompss/biobb_ml/clustering 2021-10-30T08:00:09,661 copying build/lib/biobb_adapters/pycompss/biobb_ml/clustering/k_means_coefficient.py -> build/bdist.linux-armv7l/wheel/biobb_adapters/pycompss/biobb_ml/clustering 2021-10-30T08:00:09,668 copying build/lib/biobb_adapters/pycompss/biobb_ml/clustering/spectral_clustering.py -> build/bdist.linux-armv7l/wheel/biobb_adapters/pycompss/biobb_ml/clustering 2021-10-30T08:00:09,675 copying build/lib/biobb_adapters/pycompss/biobb_ml/clustering/dbscan.py -> build/bdist.linux-armv7l/wheel/biobb_adapters/pycompss/biobb_ml/clustering 2021-10-30T08:00:09,681 copying build/lib/biobb_adapters/pycompss/biobb_ml/clustering/__init__.py -> build/bdist.linux-armv7l/wheel/biobb_adapters/pycompss/biobb_ml/clustering 2021-10-30T08:00:09,687 creating build/bdist.linux-armv7l/wheel/biobb_adapters/pycompss/biobb_ml/utils 2021-10-30T08:00:09,689 copying build/lib/biobb_adapters/pycompss/biobb_ml/utils/dummy_variables.py -> build/bdist.linux-armv7l/wheel/biobb_adapters/pycompss/biobb_ml/utils 2021-10-30T08:00:09,695 copying build/lib/biobb_adapters/pycompss/biobb_ml/utils/drop_columns.py -> build/bdist.linux-armv7l/wheel/biobb_adapters/pycompss/biobb_ml/utils 2021-10-30T08:00:09,702 copying build/lib/biobb_adapters/pycompss/biobb_ml/utils/map_variables.py -> build/bdist.linux-armv7l/wheel/biobb_adapters/pycompss/biobb_ml/utils 2021-10-30T08:00:09,709 copying build/lib/biobb_adapters/pycompss/biobb_ml/utils/__init__.py -> build/bdist.linux-armv7l/wheel/biobb_adapters/pycompss/biobb_ml/utils 2021-10-30T08:00:09,715 copying build/lib/biobb_adapters/pycompss/biobb_ml/utils/pairwise_comparison.py -> build/bdist.linux-armv7l/wheel/biobb_adapters/pycompss/biobb_ml/utils 2021-10-30T08:00:09,721 copying build/lib/biobb_adapters/pycompss/biobb_ml/utils/scale_columns.py -> build/bdist.linux-armv7l/wheel/biobb_adapters/pycompss/biobb_ml/utils 2021-10-30T08:00:09,726 copying build/lib/biobb_adapters/pycompss/biobb_ml/utils/dendrogram.py -> build/bdist.linux-armv7l/wheel/biobb_adapters/pycompss/biobb_ml/utils 2021-10-30T08:00:09,731 copying build/lib/biobb_adapters/pycompss/biobb_ml/utils/correlation_matrix.py -> build/bdist.linux-armv7l/wheel/biobb_adapters/pycompss/biobb_ml/utils 2021-10-30T08:00:09,737 creating build/bdist.linux-armv7l/wheel/biobb_adapters/pycompss/biobb_ml/classification 2021-10-30T08:00:09,740 copying build/lib/biobb_adapters/pycompss/biobb_ml/classification/k_neighbors_coefficient.py -> build/bdist.linux-armv7l/wheel/biobb_adapters/pycompss/biobb_ml/classification 2021-10-30T08:00:09,747 copying build/lib/biobb_adapters/pycompss/biobb_ml/classification/k_neighbors.py -> build/bdist.linux-armv7l/wheel/biobb_adapters/pycompss/biobb_ml/classification 2021-10-30T08:00:09,754 copying build/lib/biobb_adapters/pycompss/biobb_ml/classification/random_forest_classifier.py -> build/bdist.linux-armv7l/wheel/biobb_adapters/pycompss/biobb_ml/classification 2021-10-30T08:00:09,761 copying build/lib/biobb_adapters/pycompss/biobb_ml/classification/logistic_regression.py -> build/bdist.linux-armv7l/wheel/biobb_adapters/pycompss/biobb_ml/classification 2021-10-30T08:00:09,766 copying build/lib/biobb_adapters/pycompss/biobb_ml/classification/decision_tree.py -> build/bdist.linux-armv7l/wheel/biobb_adapters/pycompss/biobb_ml/classification 2021-10-30T08:00:09,771 copying build/lib/biobb_adapters/pycompss/biobb_ml/classification/__init__.py -> build/bdist.linux-armv7l/wheel/biobb_adapters/pycompss/biobb_ml/classification 2021-10-30T08:00:09,775 copying build/lib/biobb_adapters/pycompss/biobb_ml/classification/support_vector_machine.py -> build/bdist.linux-armv7l/wheel/biobb_adapters/pycompss/biobb_ml/classification 2021-10-30T08:00:09,780 copying build/lib/biobb_adapters/pycompss/biobb_ml/classification/classification_predict.py -> build/bdist.linux-armv7l/wheel/biobb_adapters/pycompss/biobb_ml/classification 2021-10-30T08:00:09,786 creating build/bdist.linux-armv7l/wheel/biobb_adapters/pycompss/biobb_ml/dimensionality_reduction 2021-10-30T08:00:09,789 copying build/lib/biobb_adapters/pycompss/biobb_ml/dimensionality_reduction/principal_component.py -> build/bdist.linux-armv7l/wheel/biobb_adapters/pycompss/biobb_ml/dimensionality_reduction 2021-10-30T08:00:09,794 copying build/lib/biobb_adapters/pycompss/biobb_ml/dimensionality_reduction/pls_components.py -> build/bdist.linux-armv7l/wheel/biobb_adapters/pycompss/biobb_ml/dimensionality_reduction 2021-10-30T08:00:09,799 copying build/lib/biobb_adapters/pycompss/biobb_ml/dimensionality_reduction/pls_regression.py -> build/bdist.linux-armv7l/wheel/biobb_adapters/pycompss/biobb_ml/dimensionality_reduction 2021-10-30T08:00:09,804 copying build/lib/biobb_adapters/pycompss/biobb_ml/dimensionality_reduction/__init__.py -> build/bdist.linux-armv7l/wheel/biobb_adapters/pycompss/biobb_ml/dimensionality_reduction 2021-10-30T08:00:09,810 creating build/bdist.linux-armv7l/wheel/biobb_adapters/pycompss/biobb_ml/regression 2021-10-30T08:00:09,812 copying build/lib/biobb_adapters/pycompss/biobb_ml/regression/regression_predict.py -> build/bdist.linux-armv7l/wheel/biobb_adapters/pycompss/biobb_ml/regression 2021-10-30T08:00:09,818 copying build/lib/biobb_adapters/pycompss/biobb_ml/regression/polynomial_regression.py -> build/bdist.linux-armv7l/wheel/biobb_adapters/pycompss/biobb_ml/regression 2021-10-30T08:00:09,823 copying build/lib/biobb_adapters/pycompss/biobb_ml/regression/linear_regression.py -> build/bdist.linux-armv7l/wheel/biobb_adapters/pycompss/biobb_ml/regression 2021-10-30T08:00:09,828 copying build/lib/biobb_adapters/pycompss/biobb_ml/regression/random_forest_regressor.py -> build/bdist.linux-armv7l/wheel/biobb_adapters/pycompss/biobb_ml/regression 2021-10-30T08:00:09,833 copying build/lib/biobb_adapters/pycompss/biobb_ml/regression/__init__.py -> build/bdist.linux-armv7l/wheel/biobb_adapters/pycompss/biobb_ml/regression 2021-10-30T08:00:09,839 creating build/bdist.linux-armv7l/wheel/biobb_adapters/pycompss/biobb_ml/neural_networks 2021-10-30T08:00:09,843 copying build/lib/biobb_adapters/pycompss/biobb_ml/neural_networks/regression_neural_network.py -> build/bdist.linux-armv7l/wheel/biobb_adapters/pycompss/biobb_ml/neural_networks 2021-10-30T08:00:09,850 copying build/lib/biobb_adapters/pycompss/biobb_ml/neural_networks/recurrent_neural_network.py -> build/bdist.linux-armv7l/wheel/biobb_adapters/pycompss/biobb_ml/neural_networks 2021-10-30T08:00:09,857 copying build/lib/biobb_adapters/pycompss/biobb_ml/neural_networks/neural_network_predict.py -> build/bdist.linux-armv7l/wheel/biobb_adapters/pycompss/biobb_ml/neural_networks 2021-10-30T08:00:09,864 copying build/lib/biobb_adapters/pycompss/biobb_ml/neural_networks/neural_network_decode.py -> build/bdist.linux-armv7l/wheel/biobb_adapters/pycompss/biobb_ml/neural_networks 2021-10-30T08:00:09,869 copying build/lib/biobb_adapters/pycompss/biobb_ml/neural_networks/autoencoder_neural_network.py -> build/bdist.linux-armv7l/wheel/biobb_adapters/pycompss/biobb_ml/neural_networks 2021-10-30T08:00:09,874 copying build/lib/biobb_adapters/pycompss/biobb_ml/neural_networks/classification_neural_network.py -> build/bdist.linux-armv7l/wheel/biobb_adapters/pycompss/biobb_ml/neural_networks 2021-10-30T08:00:09,879 copying build/lib/biobb_adapters/pycompss/biobb_ml/neural_networks/__init__.py -> build/bdist.linux-armv7l/wheel/biobb_adapters/pycompss/biobb_ml/neural_networks 2021-10-30T08:00:09,883 copying build/lib/biobb_adapters/pycompss/biobb_ml/__init__.py -> build/bdist.linux-armv7l/wheel/biobb_adapters/pycompss/biobb_ml 2021-10-30T08:00:09,888 creating build/bdist.linux-armv7l/wheel/biobb_adapters/pycompss/biobb_ml/resampling 2021-10-30T08:00:09,891 copying build/lib/biobb_adapters/pycompss/biobb_ml/resampling/resampling.py -> build/bdist.linux-armv7l/wheel/biobb_adapters/pycompss/biobb_ml/resampling 2021-10-30T08:00:09,896 copying build/lib/biobb_adapters/pycompss/biobb_ml/resampling/oversampling.py -> build/bdist.linux-armv7l/wheel/biobb_adapters/pycompss/biobb_ml/resampling 2021-10-30T08:00:09,901 copying build/lib/biobb_adapters/pycompss/biobb_ml/resampling/undersampling.py -> build/bdist.linux-armv7l/wheel/biobb_adapters/pycompss/biobb_ml/resampling 2021-10-30T08:00:09,906 copying build/lib/biobb_adapters/pycompss/biobb_ml/resampling/__init__.py -> build/bdist.linux-armv7l/wheel/biobb_adapters/pycompss/biobb_ml/resampling 2021-10-30T08:00:09,911 creating build/bdist.linux-armv7l/wheel/biobb_adapters/pycompss/biobb_chemistry 2021-10-30T08:00:09,915 creating build/bdist.linux-armv7l/wheel/biobb_adapters/pycompss/biobb_chemistry/acpype 2021-10-30T08:00:09,918 copying build/lib/biobb_adapters/pycompss/biobb_chemistry/acpype/acpype_params_ac_pc.py -> build/bdist.linux-armv7l/wheel/biobb_adapters/pycompss/biobb_chemistry/acpype 2021-10-30T08:00:09,924 copying build/lib/biobb_adapters/pycompss/biobb_chemistry/acpype/acpype_params_gmx_opls.py -> build/bdist.linux-armv7l/wheel/biobb_adapters/pycompss/biobb_chemistry/acpype 2021-10-30T08:00:09,931 copying build/lib/biobb_adapters/pycompss/biobb_chemistry/acpype/acpype_params_cns.py -> build/bdist.linux-armv7l/wheel/biobb_adapters/pycompss/biobb_chemistry/acpype 2021-10-30T08:00:09,938 copying build/lib/biobb_adapters/pycompss/biobb_chemistry/acpype/acpype_params_gmx_opls_pc.py -> build/bdist.linux-armv7l/wheel/biobb_adapters/pycompss/biobb_chemistry/acpype 2021-10-30T08:00:09,944 copying build/lib/biobb_adapters/pycompss/biobb_chemistry/acpype/acpype_params_ac.py -> build/bdist.linux-armv7l/wheel/biobb_adapters/pycompss/biobb_chemistry/acpype 2021-10-30T08:00:09,949 copying build/lib/biobb_adapters/pycompss/biobb_chemistry/acpype/acpype_params_gmx_pc.py -> build/bdist.linux-armv7l/wheel/biobb_adapters/pycompss/biobb_chemistry/acpype 2021-10-30T08:00:09,955 copying build/lib/biobb_adapters/pycompss/biobb_chemistry/acpype/__init__.py -> build/bdist.linux-armv7l/wheel/biobb_adapters/pycompss/biobb_chemistry/acpype 2021-10-30T08:00:09,959 copying build/lib/biobb_adapters/pycompss/biobb_chemistry/acpype/acpype_params_cns_pc.py -> build/bdist.linux-armv7l/wheel/biobb_adapters/pycompss/biobb_chemistry/acpype 2021-10-30T08:00:09,964 copying build/lib/biobb_adapters/pycompss/biobb_chemistry/acpype/acpype_params_gmx.py -> build/bdist.linux-armv7l/wheel/biobb_adapters/pycompss/biobb_chemistry/acpype 2021-10-30T08:00:09,970 creating build/bdist.linux-armv7l/wheel/biobb_adapters/pycompss/biobb_chemistry/babelm 2021-10-30T08:00:09,973 copying build/lib/biobb_adapters/pycompss/biobb_chemistry/babelm/babel_remove_hydrogens.py -> build/bdist.linux-armv7l/wheel/biobb_adapters/pycompss/biobb_chemistry/babelm 2021-10-30T08:00:09,978 copying build/lib/biobb_adapters/pycompss/biobb_chemistry/babelm/babel_minimize.py -> build/bdist.linux-armv7l/wheel/biobb_adapters/pycompss/biobb_chemistry/babelm 2021-10-30T08:00:09,983 copying build/lib/biobb_adapters/pycompss/biobb_chemistry/babelm/babel_add_hydrogens_pc.py -> build/bdist.linux-armv7l/wheel/biobb_adapters/pycompss/biobb_chemistry/babelm 2021-10-30T08:00:09,988 copying build/lib/biobb_adapters/pycompss/biobb_chemistry/babelm/babel_remove_hydrogens_pc.py -> build/bdist.linux-armv7l/wheel/biobb_adapters/pycompss/biobb_chemistry/babelm 2021-10-30T08:00:09,993 copying build/lib/biobb_adapters/pycompss/biobb_chemistry/babelm/babel_convert_pc.py -> build/bdist.linux-armv7l/wheel/biobb_adapters/pycompss/biobb_chemistry/babelm 2021-10-30T08:00:09,998 copying build/lib/biobb_adapters/pycompss/biobb_chemistry/babelm/__init__.py -> build/bdist.linux-armv7l/wheel/biobb_adapters/pycompss/biobb_chemistry/babelm 2021-10-30T08:00:10,002 copying build/lib/biobb_adapters/pycompss/biobb_chemistry/babelm/babel_add_hydrogens.py -> build/bdist.linux-armv7l/wheel/biobb_adapters/pycompss/biobb_chemistry/babelm 2021-10-30T08:00:10,007 copying build/lib/biobb_adapters/pycompss/biobb_chemistry/babelm/babel_convert.py -> build/bdist.linux-armv7l/wheel/biobb_adapters/pycompss/biobb_chemistry/babelm 2021-10-30T08:00:10,012 copying build/lib/biobb_adapters/pycompss/biobb_chemistry/babelm/babel_minimize_pc.py -> build/bdist.linux-armv7l/wheel/biobb_adapters/pycompss/biobb_chemistry/babelm 2021-10-30T08:00:10,017 copying build/lib/biobb_adapters/pycompss/biobb_chemistry/__init__.py -> build/bdist.linux-armv7l/wheel/biobb_adapters/pycompss/biobb_chemistry 2021-10-30T08:00:10,023 creating build/bdist.linux-armv7l/wheel/biobb_adapters/pycompss/biobb_chemistry/ambertools 2021-10-30T08:00:10,025 copying build/lib/biobb_adapters/pycompss/biobb_chemistry/ambertools/reduce_remove_hydrogens.py -> build/bdist.linux-armv7l/wheel/biobb_adapters/pycompss/biobb_chemistry/ambertools 2021-10-30T08:00:10,031 copying build/lib/biobb_adapters/pycompss/biobb_chemistry/ambertools/reduce_remove_hydrogens_pc.py -> build/bdist.linux-armv7l/wheel/biobb_adapters/pycompss/biobb_chemistry/ambertools 2021-10-30T08:00:10,036 copying build/lib/biobb_adapters/pycompss/biobb_chemistry/ambertools/__init__.py -> build/bdist.linux-armv7l/wheel/biobb_adapters/pycompss/biobb_chemistry/ambertools 2021-10-30T08:00:10,040 copying build/lib/biobb_adapters/pycompss/biobb_chemistry/ambertools/reduce_add_hydrogens_pc.py -> build/bdist.linux-armv7l/wheel/biobb_adapters/pycompss/biobb_chemistry/ambertools 2021-10-30T08:00:10,045 copying build/lib/biobb_adapters/pycompss/biobb_chemistry/ambertools/reduce_add_hydrogens.py -> build/bdist.linux-armv7l/wheel/biobb_adapters/pycompss/biobb_chemistry/ambertools 2021-10-30T08:00:10,050 copying build/lib/biobb_adapters/pycompss/__init__.py -> build/bdist.linux-armv7l/wheel/biobb_adapters/pycompss 2021-10-30T08:00:10,055 creating build/bdist.linux-armv7l/wheel/biobb_adapters/pycompss/biobb_amber 2021-10-30T08:00:10,059 creating build/bdist.linux-armv7l/wheel/biobb_adapters/pycompss/biobb_amber/ambpdb 2021-10-30T08:00:10,062 copying build/lib/biobb_adapters/pycompss/biobb_amber/ambpdb/amber_to_pdb.py -> build/bdist.linux-armv7l/wheel/biobb_adapters/pycompss/biobb_amber/ambpdb 2021-10-30T08:00:10,067 copying build/lib/biobb_adapters/pycompss/biobb_amber/ambpdb/__init__.py -> build/bdist.linux-armv7l/wheel/biobb_adapters/pycompss/biobb_amber/ambpdb 2021-10-30T08:00:10,072 creating build/bdist.linux-armv7l/wheel/biobb_adapters/pycompss/biobb_amber/sander 2021-10-30T08:00:10,075 copying build/lib/biobb_adapters/pycompss/biobb_amber/sander/sander_mdrun.py -> build/bdist.linux-armv7l/wheel/biobb_adapters/pycompss/biobb_amber/sander 2021-10-30T08:00:10,080 copying build/lib/biobb_adapters/pycompss/biobb_amber/sander/__init__.py -> build/bdist.linux-armv7l/wheel/biobb_adapters/pycompss/biobb_amber/sander 2021-10-30T08:00:10,086 creating build/bdist.linux-armv7l/wheel/biobb_adapters/pycompss/biobb_amber/leap 2021-10-30T08:00:10,089 copying build/lib/biobb_adapters/pycompss/biobb_amber/leap/leap_add_ions.py -> build/bdist.linux-armv7l/wheel/biobb_adapters/pycompss/biobb_amber/leap 2021-10-30T08:00:10,094 copying build/lib/biobb_adapters/pycompss/biobb_amber/leap/leap_solvate.py -> build/bdist.linux-armv7l/wheel/biobb_adapters/pycompss/biobb_amber/leap 2021-10-30T08:00:10,099 copying build/lib/biobb_adapters/pycompss/biobb_amber/leap/leap_gen_top.py -> build/bdist.linux-armv7l/wheel/biobb_adapters/pycompss/biobb_amber/leap 2021-10-30T08:00:10,104 copying build/lib/biobb_adapters/pycompss/biobb_amber/leap/__init__.py -> build/bdist.linux-armv7l/wheel/biobb_adapters/pycompss/biobb_amber/leap 2021-10-30T08:00:10,108 copying build/lib/biobb_adapters/pycompss/biobb_amber/leap/leap_build_linear_structure.py -> build/bdist.linux-armv7l/wheel/biobb_adapters/pycompss/biobb_amber/leap 2021-10-30T08:00:10,114 creating build/bdist.linux-armv7l/wheel/biobb_adapters/pycompss/biobb_amber/cpptraj 2021-10-30T08:00:10,117 copying build/lib/biobb_adapters/pycompss/biobb_amber/cpptraj/cpptraj_randomize_ions.py -> build/bdist.linux-armv7l/wheel/biobb_adapters/pycompss/biobb_amber/cpptraj 2021-10-30T08:00:10,122 copying build/lib/biobb_adapters/pycompss/biobb_amber/cpptraj/__init__.py -> build/bdist.linux-armv7l/wheel/biobb_adapters/pycompss/biobb_amber/cpptraj 2021-10-30T08:00:10,128 creating build/bdist.linux-armv7l/wheel/biobb_adapters/pycompss/biobb_amber/cphstats 2021-10-30T08:00:10,130 copying build/lib/biobb_adapters/pycompss/biobb_amber/cphstats/cestats_run.py -> build/bdist.linux-armv7l/wheel/biobb_adapters/pycompss/biobb_amber/cphstats 2021-10-30T08:00:10,136 copying build/lib/biobb_adapters/pycompss/biobb_amber/cphstats/cphstats_run.py -> build/bdist.linux-armv7l/wheel/biobb_adapters/pycompss/biobb_amber/cphstats 2021-10-30T08:00:10,141 copying build/lib/biobb_adapters/pycompss/biobb_amber/cphstats/__init__.py -> build/bdist.linux-armv7l/wheel/biobb_adapters/pycompss/biobb_amber/cphstats 2021-10-30T08:00:10,146 creating build/bdist.linux-armv7l/wheel/biobb_adapters/pycompss/biobb_amber/parmed 2021-10-30T08:00:10,149 copying build/lib/biobb_adapters/pycompss/biobb_amber/parmed/parmed_hmassrepartition.py -> build/bdist.linux-armv7l/wheel/biobb_adapters/pycompss/biobb_amber/parmed 2021-10-30T08:00:10,154 copying build/lib/biobb_adapters/pycompss/biobb_amber/parmed/__init__.py -> build/bdist.linux-armv7l/wheel/biobb_adapters/pycompss/biobb_amber/parmed 2021-10-30T08:00:10,159 copying build/lib/biobb_adapters/pycompss/biobb_amber/parmed/parmed_cpinutil.py -> build/bdist.linux-armv7l/wheel/biobb_adapters/pycompss/biobb_amber/parmed 2021-10-30T08:00:10,165 creating build/bdist.linux-armv7l/wheel/biobb_adapters/pycompss/biobb_amber/process 2021-10-30T08:00:10,167 copying build/lib/biobb_adapters/pycompss/biobb_amber/process/process_minout.py -> build/bdist.linux-armv7l/wheel/biobb_adapters/pycompss/biobb_amber/process 2021-10-30T08:00:10,173 copying build/lib/biobb_adapters/pycompss/biobb_amber/process/process_mdout.py -> build/bdist.linux-armv7l/wheel/biobb_adapters/pycompss/biobb_amber/process 2021-10-30T08:00:10,177 copying build/lib/biobb_adapters/pycompss/biobb_amber/process/__init__.py -> build/bdist.linux-armv7l/wheel/biobb_adapters/pycompss/biobb_amber/process 2021-10-30T08:00:10,181 copying build/lib/biobb_adapters/pycompss/biobb_amber/__init__.py -> build/bdist.linux-armv7l/wheel/biobb_adapters/pycompss/biobb_amber 2021-10-30T08:00:10,187 creating build/bdist.linux-armv7l/wheel/biobb_adapters/pycompss/biobb_amber/nab 2021-10-30T08:00:10,190 copying build/lib/biobb_adapters/pycompss/biobb_amber/nab/nab_build_dna_structure.py -> build/bdist.linux-armv7l/wheel/biobb_adapters/pycompss/biobb_amber/nab 2021-10-30T08:00:10,197 copying build/lib/biobb_adapters/pycompss/biobb_amber/nab/__init__.py -> build/bdist.linux-armv7l/wheel/biobb_adapters/pycompss/biobb_amber/nab 2021-10-30T08:00:10,204 creating build/bdist.linux-armv7l/wheel/biobb_adapters/pycompss/biobb_amber/pmemd 2021-10-30T08:00:10,208 copying build/lib/biobb_adapters/pycompss/biobb_amber/pmemd/pmemd_mdrun.py -> build/bdist.linux-armv7l/wheel/biobb_adapters/pycompss/biobb_amber/pmemd 2021-10-30T08:00:10,214 copying build/lib/biobb_adapters/pycompss/biobb_amber/pmemd/__init__.py -> build/bdist.linux-armv7l/wheel/biobb_adapters/pycompss/biobb_amber/pmemd 2021-10-30T08:00:10,220 creating build/bdist.linux-armv7l/wheel/biobb_adapters/pycompss/biobb_amber/pdb4amber 2021-10-30T08:00:10,222 copying build/lib/biobb_adapters/pycompss/biobb_amber/pdb4amber/pdb4amber.py -> build/bdist.linux-armv7l/wheel/biobb_adapters/pycompss/biobb_amber/pdb4amber 2021-10-30T08:00:10,228 copying build/lib/biobb_adapters/pycompss/biobb_amber/pdb4amber/__init__.py -> build/bdist.linux-armv7l/wheel/biobb_adapters/pycompss/biobb_amber/pdb4amber 2021-10-30T08:00:10,233 copying build/lib/biobb_adapters/pycompss/biobb_amber/pdb4amber/pdb4amber_run.py -> build/bdist.linux-armv7l/wheel/biobb_adapters/pycompss/biobb_amber/pdb4amber 2021-10-30T08:00:10,241 creating build/bdist.linux-armv7l/wheel/biobb_adapters/pycompss/biobb_pmx 2021-10-30T08:00:10,245 copying build/lib/biobb_adapters/pycompss/biobb_pmx/__init__.py -> build/bdist.linux-armv7l/wheel/biobb_adapters/pycompss/biobb_pmx 2021-10-30T08:00:10,266 creating build/bdist.linux-armv7l/wheel/biobb_adapters/pycompss/biobb_pmx/pmx 2021-10-30T08:00:10,270 copying build/lib/biobb_adapters/pycompss/biobb_pmx/pmx/pmxgentop.py -> build/bdist.linux-armv7l/wheel/biobb_adapters/pycompss/biobb_pmx/pmx 2021-10-30T08:00:10,277 copying build/lib/biobb_adapters/pycompss/biobb_pmx/pmx/analyse_pc.py -> build/bdist.linux-armv7l/wheel/biobb_adapters/pycompss/biobb_pmx/pmx 2021-10-30T08:00:10,284 copying build/lib/biobb_adapters/pycompss/biobb_pmx/pmx/pmxanalyse.py -> build/bdist.linux-armv7l/wheel/biobb_adapters/pycompss/biobb_pmx/pmx 2021-10-30T08:00:10,291 copying build/lib/biobb_adapters/pycompss/biobb_pmx/pmx/gentop_pc.py -> build/bdist.linux-armv7l/wheel/biobb_adapters/pycompss/biobb_pmx/pmx 2021-10-30T08:00:10,296 copying build/lib/biobb_adapters/pycompss/biobb_pmx/pmx/__init__.py -> build/bdist.linux-armv7l/wheel/biobb_adapters/pycompss/biobb_pmx/pmx 2021-10-30T08:00:10,300 copying build/lib/biobb_adapters/pycompss/biobb_pmx/pmx/mutate_bst_pc.py -> build/bdist.linux-armv7l/wheel/biobb_adapters/pycompss/biobb_pmx/pmx 2021-10-30T08:00:10,305 copying build/lib/biobb_adapters/pycompss/biobb_pmx/pmx/pmxmutate.py -> build/bdist.linux-armv7l/wheel/biobb_adapters/pycompss/biobb_pmx/pmx 2021-10-30T08:00:10,310 copying build/lib/biobb_adapters/pycompss/biobb_pmx/pmx/mutate_pc.py -> build/bdist.linux-armv7l/wheel/biobb_adapters/pycompss/biobb_pmx/pmx 2021-10-30T08:00:10,317 creating build/bdist.linux-armv7l/wheel/biobb_adapters/pycompss/biobb_md 2021-10-30T08:00:10,323 creating build/bdist.linux-armv7l/wheel/biobb_adapters/pycompss/biobb_md/gromacs 2021-10-30T08:00:10,327 copying build/lib/biobb_adapters/pycompss/biobb_md/gromacs/solvate.py -> build/bdist.linux-armv7l/wheel/biobb_adapters/pycompss/biobb_md/gromacs 2021-10-30T08:00:10,334 copying build/lib/biobb_adapters/pycompss/biobb_md/gromacs/gmxselect.py -> build/bdist.linux-armv7l/wheel/biobb_adapters/pycompss/biobb_md/gromacs 2021-10-30T08:00:10,339 copying build/lib/biobb_adapters/pycompss/biobb_md/gromacs/genrestr.py -> build/bdist.linux-armv7l/wheel/biobb_adapters/pycompss/biobb_md/gromacs 2021-10-30T08:00:10,344 copying build/lib/biobb_adapters/pycompss/biobb_md/gromacs/mdrun.py -> build/bdist.linux-armv7l/wheel/biobb_adapters/pycompss/biobb_md/gromacs 2021-10-30T08:00:10,349 copying build/lib/biobb_adapters/pycompss/biobb_md/gromacs/pdb2gmx.py -> build/bdist.linux-armv7l/wheel/biobb_adapters/pycompss/biobb_md/gromacs 2021-10-30T08:00:10,354 copying build/lib/biobb_adapters/pycompss/biobb_md/gromacs/make_ndx.py -> build/bdist.linux-armv7l/wheel/biobb_adapters/pycompss/biobb_md/gromacs 2021-10-30T08:00:10,359 copying build/lib/biobb_adapters/pycompss/biobb_md/gromacs/genion.py -> build/bdist.linux-armv7l/wheel/biobb_adapters/pycompss/biobb_md/gromacs 2021-10-30T08:00:10,363 copying build/lib/biobb_adapters/pycompss/biobb_md/gromacs/__init__.py -> build/bdist.linux-armv7l/wheel/biobb_adapters/pycompss/biobb_md/gromacs 2021-10-30T08:00:10,367 copying build/lib/biobb_adapters/pycompss/biobb_md/gromacs/grompp.py -> build/bdist.linux-armv7l/wheel/biobb_adapters/pycompss/biobb_md/gromacs 2021-10-30T08:00:10,372 copying build/lib/biobb_adapters/pycompss/biobb_md/gromacs/editconf.py -> build/bdist.linux-armv7l/wheel/biobb_adapters/pycompss/biobb_md/gromacs 2021-10-30T08:00:10,377 copying build/lib/biobb_adapters/pycompss/biobb_md/gromacs/grompp_mdrun.py -> build/bdist.linux-armv7l/wheel/biobb_adapters/pycompss/biobb_md/gromacs 2021-10-30T08:00:10,383 creating build/bdist.linux-armv7l/wheel/biobb_adapters/pycompss/biobb_md/gromacs_extra 2021-10-30T08:00:10,386 copying build/lib/biobb_adapters/pycompss/biobb_md/gromacs_extra/ndx2resttop.py -> build/bdist.linux-armv7l/wheel/biobb_adapters/pycompss/biobb_md/gromacs_extra 2021-10-30T08:00:10,391 copying build/lib/biobb_adapters/pycompss/biobb_md/gromacs_extra/append_ligand_pc.py -> build/bdist.linux-armv7l/wheel/biobb_adapters/pycompss/biobb_md/gromacs_extra 2021-10-30T08:00:10,396 copying build/lib/biobb_adapters/pycompss/biobb_md/gromacs_extra/__init__.py -> build/bdist.linux-armv7l/wheel/biobb_adapters/pycompss/biobb_md/gromacs_extra 2021-10-30T08:00:10,400 copying build/lib/biobb_adapters/pycompss/biobb_md/gromacs_extra/ndx2resttop_pc.py -> build/bdist.linux-armv7l/wheel/biobb_adapters/pycompss/biobb_md/gromacs_extra 2021-10-30T08:00:10,404 copying build/lib/biobb_adapters/pycompss/biobb_md/gromacs_extra/append_ligand.py -> build/bdist.linux-armv7l/wheel/biobb_adapters/pycompss/biobb_md/gromacs_extra 2021-10-30T08:00:10,409 copying build/lib/biobb_adapters/pycompss/biobb_md/__init__.py -> build/bdist.linux-armv7l/wheel/biobb_adapters/pycompss/biobb_md 2021-10-30T08:00:10,414 creating build/bdist.linux-armv7l/wheel/biobb_adapters/pycompss/biobb_model 2021-10-30T08:00:10,417 copying build/lib/biobb_adapters/pycompss/biobb_model/__init__.py -> build/bdist.linux-armv7l/wheel/biobb_adapters/pycompss/biobb_model 2021-10-30T08:00:10,422 creating build/bdist.linux-armv7l/wheel/biobb_adapters/pycompss/biobb_model/model 2021-10-30T08:00:10,425 copying build/lib/biobb_adapters/pycompss/biobb_model/model/fix_side_chain_pc.py -> build/bdist.linux-armv7l/wheel/biobb_adapters/pycompss/biobb_model/model 2021-10-30T08:00:10,430 copying build/lib/biobb_adapters/pycompss/biobb_model/model/mutate.py -> build/bdist.linux-armv7l/wheel/biobb_adapters/pycompss/biobb_model/model 2021-10-30T08:00:10,435 copying build/lib/biobb_adapters/pycompss/biobb_model/model/fix_backbone.py -> build/bdist.linux-armv7l/wheel/biobb_adapters/pycompss/biobb_model/model 2021-10-30T08:00:10,440 copying build/lib/biobb_adapters/pycompss/biobb_model/model/checking_log.py -> build/bdist.linux-armv7l/wheel/biobb_adapters/pycompss/biobb_model/model 2021-10-30T08:00:10,445 copying build/lib/biobb_adapters/pycompss/biobb_model/model/fix_amides.py -> build/bdist.linux-armv7l/wheel/biobb_adapters/pycompss/biobb_model/model 2021-10-30T08:00:10,450 copying build/lib/biobb_adapters/pycompss/biobb_model/model/fix_chirality.py -> build/bdist.linux-armv7l/wheel/biobb_adapters/pycompss/biobb_model/model 2021-10-30T08:00:10,455 copying build/lib/biobb_adapters/pycompss/biobb_model/model/fix_side_chain.py -> build/bdist.linux-armv7l/wheel/biobb_adapters/pycompss/biobb_model/model 2021-10-30T08:00:10,460 copying build/lib/biobb_adapters/pycompss/biobb_model/model/__init__.py -> build/bdist.linux-armv7l/wheel/biobb_adapters/pycompss/biobb_model/model 2021-10-30T08:00:10,464 copying build/lib/biobb_adapters/pycompss/biobb_model/model/mutate_pc.py -> build/bdist.linux-armv7l/wheel/biobb_adapters/pycompss/biobb_model/model 2021-10-30T08:00:10,470 creating build/bdist.linux-armv7l/wheel/biobb_adapters/pycompss/biobb_analysis 2021-10-30T08:00:10,474 creating build/bdist.linux-armv7l/wheel/biobb_adapters/pycompss/biobb_analysis/gromacs 2021-10-30T08:00:10,477 copying build/lib/biobb_adapters/pycompss/biobb_analysis/gromacs/gmx_energy_pc.py -> build/bdist.linux-armv7l/wheel/biobb_adapters/pycompss/biobb_analysis/gromacs 2021-10-30T08:00:10,482 copying build/lib/biobb_adapters/pycompss/biobb_analysis/gromacs/gmx_rms.py -> build/bdist.linux-armv7l/wheel/biobb_adapters/pycompss/biobb_analysis/gromacs 2021-10-30T08:00:10,487 copying build/lib/biobb_adapters/pycompss/biobb_analysis/gromacs/gmx_trjconv_str.py -> build/bdist.linux-armv7l/wheel/biobb_adapters/pycompss/biobb_analysis/gromacs 2021-10-30T08:00:10,492 copying build/lib/biobb_adapters/pycompss/biobb_analysis/gromacs/gmx_image.py -> build/bdist.linux-armv7l/wheel/biobb_adapters/pycompss/biobb_analysis/gromacs 2021-10-30T08:00:10,497 copying build/lib/biobb_adapters/pycompss/biobb_analysis/gromacs/gmx_rgyr.py -> build/bdist.linux-armv7l/wheel/biobb_adapters/pycompss/biobb_analysis/gromacs 2021-10-30T08:00:10,502 copying build/lib/biobb_adapters/pycompss/biobb_analysis/gromacs/gmx_trjconv_str_pc.py -> build/bdist.linux-armv7l/wheel/biobb_adapters/pycompss/biobb_analysis/gromacs 2021-10-30T08:00:10,507 copying build/lib/biobb_adapters/pycompss/biobb_analysis/gromacs/gmx_trjconv_str_ens_pc.py -> build/bdist.linux-armv7l/wheel/biobb_adapters/pycompss/biobb_analysis/gromacs 2021-10-30T08:00:10,512 copying build/lib/biobb_adapters/pycompss/biobb_analysis/gromacs/gmx_rgyr_pc.py -> build/bdist.linux-armv7l/wheel/biobb_adapters/pycompss/biobb_analysis/gromacs 2021-10-30T08:00:10,517 copying build/lib/biobb_adapters/pycompss/biobb_analysis/gromacs/gmx_image_pc.py -> build/bdist.linux-armv7l/wheel/biobb_adapters/pycompss/biobb_analysis/gromacs 2021-10-30T08:00:10,522 copying build/lib/biobb_adapters/pycompss/biobb_analysis/gromacs/gmx_cluster_pc.py -> build/bdist.linux-armv7l/wheel/biobb_adapters/pycompss/biobb_analysis/gromacs 2021-10-30T08:00:10,527 copying build/lib/biobb_adapters/pycompss/biobb_analysis/gromacs/gmx_rms_pc.py -> build/bdist.linux-armv7l/wheel/biobb_adapters/pycompss/biobb_analysis/gromacs 2021-10-30T08:00:10,532 copying build/lib/biobb_adapters/pycompss/biobb_analysis/gromacs/gmx_cluster.py -> build/bdist.linux-armv7l/wheel/biobb_adapters/pycompss/biobb_analysis/gromacs 2021-10-30T08:00:10,537 copying build/lib/biobb_adapters/pycompss/biobb_analysis/gromacs/__init__.py -> build/bdist.linux-armv7l/wheel/biobb_adapters/pycompss/biobb_analysis/gromacs 2021-10-30T08:00:10,541 copying build/lib/biobb_adapters/pycompss/biobb_analysis/gromacs/gmx_trjconv_str_ens.py -> build/bdist.linux-armv7l/wheel/biobb_adapters/pycompss/biobb_analysis/gromacs 2021-10-30T08:00:10,546 copying build/lib/biobb_adapters/pycompss/biobb_analysis/gromacs/gmx_trjconv_trj.py -> build/bdist.linux-armv7l/wheel/biobb_adapters/pycompss/biobb_analysis/gromacs 2021-10-30T08:00:10,551 copying build/lib/biobb_adapters/pycompss/biobb_analysis/gromacs/gmx_trjconv_trj_pc.py -> build/bdist.linux-armv7l/wheel/biobb_adapters/pycompss/biobb_analysis/gromacs 2021-10-30T08:00:10,556 copying build/lib/biobb_adapters/pycompss/biobb_analysis/gromacs/gmx_energy.py -> build/bdist.linux-armv7l/wheel/biobb_adapters/pycompss/biobb_analysis/gromacs 2021-10-30T08:00:10,561 copying build/lib/biobb_adapters/pycompss/biobb_analysis/__init__.py -> build/bdist.linux-armv7l/wheel/biobb_adapters/pycompss/biobb_analysis 2021-10-30T08:00:10,569 creating build/bdist.linux-armv7l/wheel/biobb_adapters/pycompss/biobb_analysis/ambertools 2021-10-30T08:00:10,573 copying build/lib/biobb_adapters/pycompss/biobb_analysis/ambertools/cpptraj_slice.py -> build/bdist.linux-armv7l/wheel/biobb_adapters/pycompss/biobb_analysis/ambertools 2021-10-30T08:00:10,580 copying build/lib/biobb_adapters/pycompss/biobb_analysis/ambertools/cpptraj_rgyr.py -> build/bdist.linux-armv7l/wheel/biobb_adapters/pycompss/biobb_analysis/ambertools 2021-10-30T08:00:10,586 copying build/lib/biobb_adapters/pycompss/biobb_analysis/ambertools/cpptraj_bfactor.py -> build/bdist.linux-armv7l/wheel/biobb_adapters/pycompss/biobb_analysis/ambertools 2021-10-30T08:00:10,591 copying build/lib/biobb_adapters/pycompss/biobb_analysis/ambertools/cpptraj_convert_pc.py -> build/bdist.linux-armv7l/wheel/biobb_adapters/pycompss/biobb_analysis/ambertools 2021-10-30T08:00:10,596 copying build/lib/biobb_adapters/pycompss/biobb_analysis/ambertools/cpptraj_mask_pc.py -> build/bdist.linux-armv7l/wheel/biobb_adapters/pycompss/biobb_analysis/ambertools 2021-10-30T08:00:10,601 copying build/lib/biobb_adapters/pycompss/biobb_analysis/ambertools/cpptraj_dry_pc.py -> build/bdist.linux-armv7l/wheel/biobb_adapters/pycompss/biobb_analysis/ambertools 2021-10-30T08:00:10,607 copying build/lib/biobb_adapters/pycompss/biobb_analysis/ambertools/cpptraj_snapshot.py -> build/bdist.linux-armv7l/wheel/biobb_adapters/pycompss/biobb_analysis/ambertools 2021-10-30T08:00:10,614 copying build/lib/biobb_adapters/pycompss/biobb_analysis/ambertools/cpptraj_image.py -> build/bdist.linux-armv7l/wheel/biobb_adapters/pycompss/biobb_analysis/ambertools 2021-10-30T08:00:10,620 copying build/lib/biobb_adapters/pycompss/biobb_analysis/ambertools/cpptraj_average.py -> build/bdist.linux-armv7l/wheel/biobb_adapters/pycompss/biobb_analysis/ambertools 2021-10-30T08:00:10,645 copying build/lib/biobb_adapters/pycompss/biobb_analysis/ambertools/cpptraj_rmsf.py -> build/bdist.linux-armv7l/wheel/biobb_adapters/pycompss/biobb_analysis/ambertools 2021-10-30T08:00:10,652 copying build/lib/biobb_adapters/pycompss/biobb_analysis/ambertools/cpptraj_image_pc.py -> build/bdist.linux-armv7l/wheel/biobb_adapters/pycompss/biobb_analysis/ambertools 2021-10-30T08:00:10,659 copying build/lib/biobb_adapters/pycompss/biobb_analysis/ambertools/cpptraj_snapshot_pc.py -> build/bdist.linux-armv7l/wheel/biobb_adapters/pycompss/biobb_analysis/ambertools 2021-10-30T08:00:10,665 copying build/lib/biobb_adapters/pycompss/biobb_analysis/ambertools/cpptraj_bfactor_pc.py -> build/bdist.linux-armv7l/wheel/biobb_adapters/pycompss/biobb_analysis/ambertools 2021-10-30T08:00:10,670 copying build/lib/biobb_adapters/pycompss/biobb_analysis/ambertools/cpptraj_dry.py -> build/bdist.linux-armv7l/wheel/biobb_adapters/pycompss/biobb_analysis/ambertools 2021-10-30T08:00:10,675 copying build/lib/biobb_adapters/pycompss/biobb_analysis/ambertools/cpptraj_average_pc.py -> build/bdist.linux-armv7l/wheel/biobb_adapters/pycompss/biobb_analysis/ambertools 2021-10-30T08:00:10,680 copying build/lib/biobb_adapters/pycompss/biobb_analysis/ambertools/cpptraj_strip_pc.py -> build/bdist.linux-armv7l/wheel/biobb_adapters/pycompss/biobb_analysis/ambertools 2021-10-30T08:00:10,685 copying build/lib/biobb_adapters/pycompss/biobb_analysis/ambertools/__init__.py -> build/bdist.linux-armv7l/wheel/biobb_adapters/pycompss/biobb_analysis/ambertools 2021-10-30T08:00:10,691 copying build/lib/biobb_adapters/pycompss/biobb_analysis/ambertools/cpptraj_slice_pc.py -> build/bdist.linux-armv7l/wheel/biobb_adapters/pycompss/biobb_analysis/ambertools 2021-10-30T08:00:10,698 copying build/lib/biobb_adapters/pycompss/biobb_analysis/ambertools/cpptraj_strip.py -> build/bdist.linux-armv7l/wheel/biobb_adapters/pycompss/biobb_analysis/ambertools 2021-10-30T08:00:10,705 copying build/lib/biobb_adapters/pycompss/biobb_analysis/ambertools/cpptraj_rms.py -> build/bdist.linux-armv7l/wheel/biobb_adapters/pycompss/biobb_analysis/ambertools 2021-10-30T08:00:10,710 copying build/lib/biobb_adapters/pycompss/biobb_analysis/ambertools/cpptraj_rmsf_pc.py -> build/bdist.linux-armv7l/wheel/biobb_adapters/pycompss/biobb_analysis/ambertools 2021-10-30T08:00:10,715 copying build/lib/biobb_adapters/pycompss/biobb_analysis/ambertools/cpptraj_mask.py -> build/bdist.linux-armv7l/wheel/biobb_adapters/pycompss/biobb_analysis/ambertools 2021-10-30T08:00:10,719 copying build/lib/biobb_adapters/pycompss/biobb_analysis/ambertools/cpptraj_convert.py -> build/bdist.linux-armv7l/wheel/biobb_adapters/pycompss/biobb_analysis/ambertools 2021-10-30T08:00:10,724 copying build/lib/biobb_adapters/pycompss/biobb_analysis/ambertools/cpptraj_rms_pc.py -> build/bdist.linux-armv7l/wheel/biobb_adapters/pycompss/biobb_analysis/ambertools 2021-10-30T08:00:10,729 copying build/lib/biobb_adapters/pycompss/biobb_analysis/ambertools/cpptraj_rgyr_pc.py -> build/bdist.linux-armv7l/wheel/biobb_adapters/pycompss/biobb_analysis/ambertools 2021-10-30T08:00:10,735 creating build/bdist.linux-armv7l/wheel/biobb_adapters/pycompss/biobb_structure_utils 2021-10-30T08:00:10,740 creating build/bdist.linux-armv7l/wheel/biobb_adapters/pycompss/biobb_structure_utils/utils 2021-10-30T08:00:10,743 copying build/lib/biobb_adapters/pycompss/biobb_structure_utils/utils/extract_atoms_pc.py -> build/bdist.linux-armv7l/wheel/biobb_adapters/pycompss/biobb_structure_utils/utils 2021-10-30T08:00:10,749 copying build/lib/biobb_adapters/pycompss/biobb_structure_utils/utils/renumber_structure.py -> build/bdist.linux-armv7l/wheel/biobb_adapters/pycompss/biobb_structure_utils/utils 2021-10-30T08:00:10,756 copying build/lib/biobb_adapters/pycompss/biobb_structure_utils/utils/extract_atoms.py -> build/bdist.linux-armv7l/wheel/biobb_adapters/pycompss/biobb_structure_utils/utils 2021-10-30T08:00:10,763 copying build/lib/biobb_adapters/pycompss/biobb_structure_utils/utils/structure_check.py -> build/bdist.linux-armv7l/wheel/biobb_adapters/pycompss/biobb_structure_utils/utils 2021-10-30T08:00:10,769 copying build/lib/biobb_adapters/pycompss/biobb_structure_utils/utils/str_check_add_hydrogens.py -> build/bdist.linux-armv7l/wheel/biobb_adapters/pycompss/biobb_structure_utils/utils 2021-10-30T08:00:10,774 copying build/lib/biobb_adapters/pycompss/biobb_structure_utils/utils/extract_model.py -> build/bdist.linux-armv7l/wheel/biobb_adapters/pycompss/biobb_structure_utils/utils 2021-10-30T08:00:10,779 copying build/lib/biobb_adapters/pycompss/biobb_structure_utils/utils/extract_heteroatoms_pc.py -> build/bdist.linux-armv7l/wheel/biobb_adapters/pycompss/biobb_structure_utils/utils 2021-10-30T08:00:10,784 copying build/lib/biobb_adapters/pycompss/biobb_structure_utils/utils/extract_molecule.py -> build/bdist.linux-armv7l/wheel/biobb_adapters/pycompss/biobb_structure_utils/utils 2021-10-30T08:00:10,790 copying build/lib/biobb_adapters/pycompss/biobb_structure_utils/utils/renumber_structures_pc.py -> build/bdist.linux-armv7l/wheel/biobb_adapters/pycompss/biobb_structure_utils/utils 2021-10-30T08:00:10,797 copying build/lib/biobb_adapters/pycompss/biobb_structure_utils/utils/cat_pdb.py -> build/bdist.linux-armv7l/wheel/biobb_adapters/pycompss/biobb_structure_utils/utils 2021-10-30T08:00:10,804 copying build/lib/biobb_adapters/pycompss/biobb_structure_utils/utils/extract_model_pc.py -> build/bdist.linux-armv7l/wheel/biobb_adapters/pycompss/biobb_structure_utils/utils 2021-10-30T08:00:10,810 copying build/lib/biobb_adapters/pycompss/biobb_structure_utils/utils/cat_pdb_pc.py -> build/bdist.linux-armv7l/wheel/biobb_adapters/pycompss/biobb_structure_utils/utils 2021-10-30T08:00:10,815 copying build/lib/biobb_adapters/pycompss/biobb_structure_utils/utils/remove_pdb_water.py -> build/bdist.linux-armv7l/wheel/biobb_adapters/pycompss/biobb_structure_utils/utils 2021-10-30T08:00:10,820 copying build/lib/biobb_adapters/pycompss/biobb_structure_utils/utils/extract_protein.py -> build/bdist.linux-armv7l/wheel/biobb_adapters/pycompss/biobb_structure_utils/utils 2021-10-30T08:00:10,825 copying build/lib/biobb_adapters/pycompss/biobb_structure_utils/utils/extract_chain_pc.py -> build/bdist.linux-armv7l/wheel/biobb_adapters/pycompss/biobb_structure_utils/utils 2021-10-30T08:00:10,830 copying build/lib/biobb_adapters/pycompss/biobb_structure_utils/utils/remove_ligand_pc.py -> build/bdist.linux-armv7l/wheel/biobb_adapters/pycompss/biobb_structure_utils/utils 2021-10-30T08:00:10,837 copying build/lib/biobb_adapters/pycompss/biobb_structure_utils/utils/extract_heteroatoms.py -> build/bdist.linux-armv7l/wheel/biobb_adapters/pycompss/biobb_structure_utils/utils 2021-10-30T08:00:10,844 copying build/lib/biobb_adapters/pycompss/biobb_structure_utils/utils/remove_ligand.py -> build/bdist.linux-armv7l/wheel/biobb_adapters/pycompss/biobb_structure_utils/utils 2021-10-30T08:00:10,850 copying build/lib/biobb_adapters/pycompss/biobb_structure_utils/utils/sort_gro_residues_pc.py -> build/bdist.linux-armv7l/wheel/biobb_adapters/pycompss/biobb_structure_utils/utils 2021-10-30T08:00:10,855 copying build/lib/biobb_adapters/pycompss/biobb_structure_utils/utils/extract_protein_pc.py -> build/bdist.linux-armv7l/wheel/biobb_adapters/pycompss/biobb_structure_utils/utils 2021-10-30T08:00:10,860 copying build/lib/biobb_adapters/pycompss/biobb_structure_utils/utils/__init__.py -> build/bdist.linux-armv7l/wheel/biobb_adapters/pycompss/biobb_structure_utils/utils 2021-10-30T08:00:10,864 copying build/lib/biobb_adapters/pycompss/biobb_structure_utils/utils/remove_pdb_water_pc.py -> build/bdist.linux-armv7l/wheel/biobb_adapters/pycompss/biobb_structure_utils/utils 2021-10-30T08:00:10,869 copying build/lib/biobb_adapters/pycompss/biobb_structure_utils/utils/extract_chain.py -> build/bdist.linux-armv7l/wheel/biobb_adapters/pycompss/biobb_structure_utils/utils 2021-10-30T08:00:10,874 copying build/lib/biobb_adapters/pycompss/biobb_structure_utils/utils/sort_gro_residues.py -> build/bdist.linux-armv7l/wheel/biobb_adapters/pycompss/biobb_structure_utils/utils 2021-10-30T08:00:10,879 copying build/lib/biobb_adapters/pycompss/biobb_structure_utils/__init__.py -> build/bdist.linux-armv7l/wheel/biobb_adapters/pycompss/biobb_structure_utils 2021-10-30T08:00:10,883 running install_egg_info 2021-10-30T08:00:10,902 Copying biobb_adapters.egg-info to build/bdist.linux-armv7l/wheel/biobb_adapters-3.7.0-py3.5.egg-info 2021-10-30T08:00:10,938 running install_scripts 2021-10-30T08:00:11,132 creating build/bdist.linux-armv7l/wheel/biobb_adapters-3.7.0.dist-info/WHEEL 2021-10-30T08:00:49,846 Building wheel for biobb-adapters (setup.py): finished with status 'done' 2021-10-30T08:00:50,512 Created wheel for biobb-adapters: filename=biobb_adapters-3.7.0-py3-none-any.whl size=40179312 sha256=87c2d259b7048ea5f5b42b1af9b4ec0ebeea79a3bf75d12b74e150a6912939ec 2021-10-30T08:00:50,513 Stored in directory: /tmp/pip-ephem-wheel-cache-73e9gd4o/wheels/1f/9a/8a/363853235d4e2d4570f259f467ef0a21aefd89a6fff52a04f6 2021-10-30T08:00:50,611 Successfully built biobb-adapters 2021-10-30T08:01:00,865 Removed build tracker: '/tmp/pip-req-tracker-fn9gzh4r'