2021-11-01T21:32:43,515 Created temporary directory: /tmp/pip-ephem-wheel-cache-bccpyvnq
2021-11-01T21:32:43,521 Created temporary directory: /tmp/pip-req-tracker-oc7vxsz9
2021-11-01T21:32:43,522 Initialized build tracking at /tmp/pip-req-tracker-oc7vxsz9
2021-11-01T21:32:43,522 Created build tracker: /tmp/pip-req-tracker-oc7vxsz9
2021-11-01T21:32:43,523 Entered build tracker: /tmp/pip-req-tracker-oc7vxsz9
2021-11-01T21:32:43,524 Created temporary directory: /tmp/pip-wheel-uwr6q_em
2021-11-01T21:32:43,584 Looking in indexes: https://pypi.org/simple, https://www.piwheels.org/simple
2021-11-01T21:32:43,587 2 location(s) to search for versions of snipgenie:
2021-11-01T21:32:43,587 * https://pypi.org/simple/snipgenie/
2021-11-01T21:32:43,587 * https://www.piwheels.org/simple/snipgenie/
2021-11-01T21:32:43,588 Fetching project page and analyzing links: https://pypi.org/simple/snipgenie/
2021-11-01T21:32:43,590 Getting page https://pypi.org/simple/snipgenie/
2021-11-01T21:32:43,594 Found index url https://pypi.org/simple
2021-11-01T21:32:43,914   Found link https://files.pythonhosted.org/packages/79/4a/96b0139ad8dbb883dd21a254ca6db4ebe82b50d49687ff2845e03e9d1b07/snipgenie-0.4.0.tar.gz#sha256=042cafc1d792e720fa40ff1beac4f9e0569aa4de4e804b21761b6adf95844162 (from https://pypi.org/simple/snipgenie/), version: 0.4.0
2021-11-01T21:32:43,915   Found link https://files.pythonhosted.org/packages/f1/b0/1c88462ab786ef45c0e34be83afff7ff96e5d2c099ebb3481f7dd5a38b28/snipgenie-0.5.0.tar.gz#sha256=40934ceed7b94357f57c410acfc0cac9d321ad576838e8ac33bc463678aecbfa (from https://pypi.org/simple/snipgenie/), version: 0.5.0
2021-11-01T21:32:43,915 Fetching project page and analyzing links: https://www.piwheels.org/simple/snipgenie/
2021-11-01T21:32:43,916 Getting page https://www.piwheels.org/simple/snipgenie/
2021-11-01T21:32:43,919 Found index url https://www.piwheels.org/simple
2021-11-01T21:32:44,253   Skipping link: No binaries permitted for snipgenie: https://www.piwheels.org/simple/snipgenie/snipgenie-0.4.0-py3-none-any.whl#sha256=ad67e176ad0d7e603c2abe0711ac264a685314c0983acdddeb38ac462875eb95 (from https://www.piwheels.org/simple/snipgenie/)
2021-11-01T21:32:44,282 Given no hashes to check 1 links for project 'snipgenie': discarding no candidates
2021-11-01T21:32:44,314 Collecting snipgenie==0.5.0
2021-11-01T21:32:44,318   Created temporary directory: /tmp/pip-unpack-04gc8fed
2021-11-01T21:32:48,477   Downloading snipgenie-0.5.0.tar.gz (25.0 MB)
2021-11-01T21:33:07,931   Added snipgenie==0.5.0 from https://files.pythonhosted.org/packages/f1/b0/1c88462ab786ef45c0e34be83afff7ff96e5d2c099ebb3481f7dd5a38b28/snipgenie-0.5.0.tar.gz#sha256=40934ceed7b94357f57c410acfc0cac9d321ad576838e8ac33bc463678aecbfa to build tracker '/tmp/pip-req-tracker-oc7vxsz9'
2021-11-01T21:33:07,934     Running setup.py (path:/tmp/pip-wheel-uwr6q_em/snipgenie_7335e8f3eb1a431e932e1452fdbf8cb2/setup.py) egg_info for package snipgenie
2021-11-01T21:33:07,936     Created temporary directory: /tmp/pip-pip-egg-info-iz2x235r
2021-11-01T21:33:07,937     Running command python setup.py egg_info
2021-11-01T21:33:10,240     running egg_info
2021-11-01T21:33:10,247     creating /tmp/pip-pip-egg-info-iz2x235r/snipgenie.egg-info
2021-11-01T21:33:10,252     writing requirements to /tmp/pip-pip-egg-info-iz2x235r/snipgenie.egg-info/requires.txt
2021-11-01T21:33:10,255     writing entry points to /tmp/pip-pip-egg-info-iz2x235r/snipgenie.egg-info/entry_points.txt
2021-11-01T21:33:10,258     writing top-level names to /tmp/pip-pip-egg-info-iz2x235r/snipgenie.egg-info/top_level.txt
2021-11-01T21:33:10,261     writing dependency_links to /tmp/pip-pip-egg-info-iz2x235r/snipgenie.egg-info/dependency_links.txt
2021-11-01T21:33:10,264     writing /tmp/pip-pip-egg-info-iz2x235r/snipgenie.egg-info/PKG-INFO
2021-11-01T21:33:10,271     writing manifest file '/tmp/pip-pip-egg-info-iz2x235r/snipgenie.egg-info/SOURCES.txt'
2021-11-01T21:33:10,667     reading manifest file '/tmp/pip-pip-egg-info-iz2x235r/snipgenie.egg-info/SOURCES.txt'
2021-11-01T21:33:10,679     writing manifest file '/tmp/pip-pip-egg-info-iz2x235r/snipgenie.egg-info/SOURCES.txt'
2021-11-01T21:33:10,815   Source in /tmp/pip-wheel-uwr6q_em/snipgenie_7335e8f3eb1a431e932e1452fdbf8cb2 has version 0.5.0, which satisfies requirement snipgenie==0.5.0 from https://files.pythonhosted.org/packages/f1/b0/1c88462ab786ef45c0e34be83afff7ff96e5d2c099ebb3481f7dd5a38b28/snipgenie-0.5.0.tar.gz#sha256=40934ceed7b94357f57c410acfc0cac9d321ad576838e8ac33bc463678aecbfa
2021-11-01T21:33:10,817   Removed snipgenie==0.5.0 from https://files.pythonhosted.org/packages/f1/b0/1c88462ab786ef45c0e34be83afff7ff96e5d2c099ebb3481f7dd5a38b28/snipgenie-0.5.0.tar.gz#sha256=40934ceed7b94357f57c410acfc0cac9d321ad576838e8ac33bc463678aecbfa from build tracker '/tmp/pip-req-tracker-oc7vxsz9'
2021-11-01T21:33:10,827 Created temporary directory: /tmp/pip-unpack-drvdc24n
2021-11-01T21:33:10,828 Building wheels for collected packages: snipgenie
2021-11-01T21:33:10,837   Created temporary directory: /tmp/pip-wheel-dckahsbx
2021-11-01T21:33:10,838   Building wheel for snipgenie (setup.py): started
2021-11-01T21:33:10,838   Destination directory: /tmp/pip-wheel-dckahsbx
2021-11-01T21:33:10,839   Running command /usr/bin/python3 -u -c 'import sys, setuptools, tokenize; sys.argv[0] = '"'"'/tmp/pip-wheel-uwr6q_em/snipgenie_7335e8f3eb1a431e932e1452fdbf8cb2/setup.py'"'"'; __file__='"'"'/tmp/pip-wheel-uwr6q_em/snipgenie_7335e8f3eb1a431e932e1452fdbf8cb2/setup.py'"'"';f=getattr(tokenize, '"'"'open'"'"', open)(__file__);code=f.read().replace('"'"'\r\n'"'"', '"'"'\n'"'"');f.close();exec(compile(code, __file__, '"'"'exec'"'"'))' bdist_wheel -d /tmp/pip-wheel-dckahsbx
2021-11-01T21:33:12,990   running bdist_wheel
2021-11-01T21:33:13,005   running build
2021-11-01T21:33:13,006   running build_py
2021-11-01T21:33:13,342   creating build
2021-11-01T21:33:13,343   creating build/lib
2021-11-01T21:33:13,344   creating build/lib/snipgenie
2021-11-01T21:33:13,347   copying snipgenie/qt.py -> build/lib/snipgenie
2021-11-01T21:33:13,351   copying snipgenie/phylo.py -> build/lib/snipgenie
2021-11-01T21:33:13,356   copying snipgenie/gui.py -> build/lib/snipgenie
2021-11-01T21:33:13,366   copying snipgenie/db.py -> build/lib/snipgenie
2021-11-01T21:33:13,372   copying snipgenie/aligners.py -> build/lib/snipgenie
2021-11-01T21:33:13,378   copying snipgenie/tests.py -> build/lib/snipgenie
2021-11-01T21:33:13,383   copying snipgenie/plotting.py -> build/lib/snipgenie
2021-11-01T21:33:13,390   copying snipgenie/rdiff.py -> build/lib/snipgenie
2021-11-01T21:33:13,396   copying snipgenie/ont.py -> build/lib/snipgenie
2021-11-01T21:33:13,401   copying snipgenie/snp_typing.py -> build/lib/snipgenie
2021-11-01T21:33:13,407   copying snipgenie/tables.py -> build/lib/snipgenie
2021-11-01T21:33:13,414   copying snipgenie/gis.py -> build/lib/snipgenie
2021-11-01T21:33:13,422   copying snipgenie/app.py -> build/lib/snipgenie
2021-11-01T21:33:13,432   copying snipgenie/tools.py -> build/lib/snipgenie
2021-11-01T21:33:13,440   copying snipgenie/__init__.py -> build/lib/snipgenie
2021-11-01T21:33:13,444   copying snipgenie/widgets.py -> build/lib/snipgenie
2021-11-01T21:33:13,453   copying snipgenie/trees.py -> build/lib/snipgenie
2021-11-01T21:33:13,466   creating build/lib/snipgenie/data
2021-11-01T21:33:13,469   copying snipgenie/data/Mbovis_AF212297_mask.bed -> build/lib/snipgenie/data
2021-11-01T21:33:13,476   copying snipgenie/data/RD.csv -> build/lib/snipgenie/data
2021-11-01T21:33:13,482   copying snipgenie/data/Msmeg-MC2.gb -> build/lib/snipgenie/data
2021-11-01T21:33:15,029   copying snipgenie/data/MTB-H37Rv.gb -> build/lib/snipgenie/data
2021-11-01T21:33:16,359   copying snipgenie/data/ireland_clusters.txt -> build/lib/snipgenie/data
2021-11-01T21:33:16,364   copying snipgenie/data/dr_spacers_blast.txt -> build/lib/snipgenie/data
2021-11-01T21:33:16,385   copying snipgenie/data/nuc_snps_ireland.txt -> build/lib/snipgenie/data
2021-11-01T21:33:16,476   copying snipgenie/data/MAP-K10.fa -> build/lib/snipgenie/data
2021-11-01T21:33:16,940   copying snipgenie/data/MTB-H37Rv.fa -> build/lib/snipgenie/data
2021-11-01T21:33:17,355   copying snipgenie/data/Mbovis_csq_format.gff -> build/lib/snipgenie/data
2021-11-01T21:33:17,580   copying snipgenie/data/Mbovis_AF212297.fa -> build/lib/snipgenie/data
2021-11-01T21:33:17,998   copying snipgenie/data/RD_rules.csv -> build/lib/snipgenie/data
2021-11-01T21:33:18,007   copying snipgenie/data/MTB-H37Rv.fa.fai -> build/lib/snipgenie/data
2021-11-01T21:33:18,015   copying snipgenie/data/Msmeg-MC2.fa.fai -> build/lib/snipgenie/data
2021-11-01T21:33:18,022   copying snipgenie/data/Msmeg-MC2.gb.gff -> build/lib/snipgenie/data
2021-11-01T21:33:18,366   copying snipgenie/data/Mbovis_AF212297.gb -> build/lib/snipgenie/data
2021-11-01T21:33:19,753   copying snipgenie/data/Mbovis.org_db.csv -> build/lib/snipgenie/data
2021-11-01T21:33:19,778   copying snipgenie/data/ireland_clade_snps.csv -> build/lib/snipgenie/data
2021-11-01T21:33:19,784   copying snipgenie/data/ireland_spotypes.csv -> build/lib/snipgenie/data
2021-11-01T21:33:19,792   copying snipgenie/data/dr_spacers.fa -> build/lib/snipgenie/data
2021-11-01T21:33:19,798   copying snipgenie/data/Mbovis_AF212297.gb.gff -> build/lib/snipgenie/data
2021-11-01T21:33:20,022   copying snipgenie/data/Msmeg-MC2.fa -> build/lib/snipgenie/data
2021-11-01T21:33:20,690   copying snipgenie/data/Mbovis_AF212297.gff -> build/lib/snipgenie/data
2021-11-01T21:33:21,310   copying snipgenie/data/Mbovis_AF212297_proteins.fa -> build/lib/snipgenie/data
2021-11-01T21:33:21,463   copying snipgenie/data/MAP-K10.gb -> build/lib/snipgenie/data
2021-11-01T21:33:22,593   copying snipgenie/data/ireland_metadata.csv -> build/lib/snipgenie/data
2021-11-01T21:33:22,602   copying snipgenie/logo.png -> build/lib/snipgenie
2021-11-01T21:33:22,608   copying snipgenie/description.txt -> build/lib/snipgenie
2021-11-01T21:33:22,626   installing to build/bdist.linux-armv7l/wheel
2021-11-01T21:33:22,627   running install
2021-11-01T21:33:22,631   running install_lib
2021-11-01T21:33:22,641   creating build/bdist.linux-armv7l
2021-11-01T21:33:22,642   creating build/bdist.linux-armv7l/wheel
2021-11-01T21:33:22,646   creating build/bdist.linux-armv7l/wheel/snipgenie
2021-11-01T21:33:22,648   copying build/lib/snipgenie/qt.py -> build/bdist.linux-armv7l/wheel/snipgenie
2021-11-01T21:33:22,652   copying build/lib/snipgenie/phylo.py -> build/bdist.linux-armv7l/wheel/snipgenie
2021-11-01T21:33:22,658   copying build/lib/snipgenie/gui.py -> build/bdist.linux-armv7l/wheel/snipgenie
2021-11-01T21:33:22,670   copying build/lib/snipgenie/db.py -> build/bdist.linux-armv7l/wheel/snipgenie
2021-11-01T21:33:22,676   copying build/lib/snipgenie/aligners.py -> build/bdist.linux-armv7l/wheel/snipgenie
2021-11-01T21:33:22,682   copying build/lib/snipgenie/tests.py -> build/bdist.linux-armv7l/wheel/snipgenie
2021-11-01T21:33:22,685   copying build/lib/snipgenie/plotting.py -> build/bdist.linux-armv7l/wheel/snipgenie
2021-11-01T21:33:22,691   copying build/lib/snipgenie/rdiff.py -> build/bdist.linux-armv7l/wheel/snipgenie
2021-11-01T21:33:22,695   copying build/lib/snipgenie/ont.py -> build/bdist.linux-armv7l/wheel/snipgenie
2021-11-01T21:33:22,700   copying build/lib/snipgenie/snp_typing.py -> build/bdist.linux-armv7l/wheel/snipgenie
2021-11-01T21:33:22,706   copying build/lib/snipgenie/tables.py -> build/bdist.linux-armv7l/wheel/snipgenie
2021-11-01T21:33:22,714   copying build/lib/snipgenie/gis.py -> build/bdist.linux-armv7l/wheel/snipgenie
2021-11-01T21:33:22,721   copying build/lib/snipgenie/app.py -> build/bdist.linux-armv7l/wheel/snipgenie
2021-11-01T21:33:22,728   copying build/lib/snipgenie/tools.py -> build/bdist.linux-armv7l/wheel/snipgenie
2021-11-01T21:33:22,735   copying build/lib/snipgenie/__init__.py -> build/bdist.linux-armv7l/wheel/snipgenie
2021-11-01T21:33:22,740   copying build/lib/snipgenie/widgets.py -> build/bdist.linux-armv7l/wheel/snipgenie
2021-11-01T21:33:22,749   copying build/lib/snipgenie/logo.png -> build/bdist.linux-armv7l/wheel/snipgenie
2021-11-01T21:33:22,756   copying build/lib/snipgenie/trees.py -> build/bdist.linux-armv7l/wheel/snipgenie
2021-11-01T21:33:22,766   creating build/bdist.linux-armv7l/wheel/snipgenie/data
2021-11-01T21:33:22,768   copying build/lib/snipgenie/data/Mbovis_AF212297_mask.bed -> build/bdist.linux-armv7l/wheel/snipgenie/data
2021-11-01T21:33:22,775   copying build/lib/snipgenie/data/RD.csv -> build/bdist.linux-armv7l/wheel/snipgenie/data
2021-11-01T21:33:22,781   copying build/lib/snipgenie/data/Msmeg-MC2.gb -> build/bdist.linux-armv7l/wheel/snipgenie/data
2021-11-01T21:33:24,339   copying build/lib/snipgenie/data/MTB-H37Rv.gb -> build/bdist.linux-armv7l/wheel/snipgenie/data
2021-11-01T21:33:25,628   copying build/lib/snipgenie/data/ireland_clusters.txt -> build/bdist.linux-armv7l/wheel/snipgenie/data
2021-11-01T21:33:25,632   copying build/lib/snipgenie/data/dr_spacers_blast.txt -> build/bdist.linux-armv7l/wheel/snipgenie/data
2021-11-01T21:33:25,652   copying build/lib/snipgenie/data/nuc_snps_ireland.txt -> build/bdist.linux-armv7l/wheel/snipgenie/data
2021-11-01T21:33:25,742   copying build/lib/snipgenie/data/MAP-K10.fa -> build/bdist.linux-armv7l/wheel/snipgenie/data
2021-11-01T21:33:26,222   copying build/lib/snipgenie/data/MTB-H37Rv.fa -> build/bdist.linux-armv7l/wheel/snipgenie/data
2021-11-01T21:33:26,638   copying build/lib/snipgenie/data/Mbovis_csq_format.gff -> build/bdist.linux-armv7l/wheel/snipgenie/data
2021-11-01T21:33:26,861   copying build/lib/snipgenie/data/Mbovis_AF212297.fa -> build/bdist.linux-armv7l/wheel/snipgenie/data
2021-11-01T21:33:27,268   copying build/lib/snipgenie/data/RD_rules.csv -> build/bdist.linux-armv7l/wheel/snipgenie/data
2021-11-01T21:33:27,273   copying build/lib/snipgenie/data/MTB-H37Rv.fa.fai -> build/bdist.linux-armv7l/wheel/snipgenie/data
2021-11-01T21:33:27,277   copying build/lib/snipgenie/data/Msmeg-MC2.fa.fai -> build/bdist.linux-armv7l/wheel/snipgenie/data
2021-11-01T21:33:27,282   copying build/lib/snipgenie/data/Msmeg-MC2.gb.gff -> build/bdist.linux-armv7l/wheel/snipgenie/data
2021-11-01T21:33:27,637   copying build/lib/snipgenie/data/Mbovis_AF212297.gb -> build/bdist.linux-armv7l/wheel/snipgenie/data
2021-11-01T21:33:29,032   copying build/lib/snipgenie/data/Mbovis.org_db.csv -> build/bdist.linux-armv7l/wheel/snipgenie/data
2021-11-01T21:33:29,054   copying build/lib/snipgenie/data/ireland_clade_snps.csv -> build/bdist.linux-armv7l/wheel/snipgenie/data
2021-11-01T21:33:29,059   copying build/lib/snipgenie/data/ireland_spotypes.csv -> build/bdist.linux-armv7l/wheel/snipgenie/data
2021-11-01T21:33:29,068   copying build/lib/snipgenie/data/dr_spacers.fa -> build/bdist.linux-armv7l/wheel/snipgenie/data
2021-11-01T21:33:29,075   copying build/lib/snipgenie/data/Mbovis_AF212297.gb.gff -> build/bdist.linux-armv7l/wheel/snipgenie/data
2021-11-01T21:33:29,299   copying build/lib/snipgenie/data/Msmeg-MC2.fa -> build/bdist.linux-armv7l/wheel/snipgenie/data
2021-11-01T21:33:29,960   copying build/lib/snipgenie/data/Mbovis_AF212297.gff -> build/bdist.linux-armv7l/wheel/snipgenie/data
2021-11-01T21:33:30,585   copying build/lib/snipgenie/data/Mbovis_AF212297_proteins.fa -> build/bdist.linux-armv7l/wheel/snipgenie/data
2021-11-01T21:33:30,745   copying build/lib/snipgenie/data/MAP-K10.gb -> build/bdist.linux-armv7l/wheel/snipgenie/data
2021-11-01T21:33:31,738   copying build/lib/snipgenie/data/ireland_metadata.csv -> build/bdist.linux-armv7l/wheel/snipgenie/data
2021-11-01T21:33:31,750   copying build/lib/snipgenie/description.txt -> build/bdist.linux-armv7l/wheel/snipgenie
2021-11-01T21:33:31,756   running install_egg_info
2021-11-01T21:33:31,804   running egg_info
2021-11-01T21:33:31,806   writing dependency_links to snipgenie.egg-info/dependency_links.txt
2021-11-01T21:33:31,810   writing entry points to snipgenie.egg-info/entry_points.txt
2021-11-01T21:33:31,813   writing requirements to snipgenie.egg-info/requires.txt
2021-11-01T21:33:31,817   writing snipgenie.egg-info/PKG-INFO
2021-11-01T21:33:31,822   writing top-level names to snipgenie.egg-info/top_level.txt
2021-11-01T21:33:31,848   reading manifest file 'snipgenie.egg-info/SOURCES.txt'
2021-11-01T21:33:31,864   writing manifest file 'snipgenie.egg-info/SOURCES.txt'
2021-11-01T21:33:31,868   Copying snipgenie.egg-info to build/bdist.linux-armv7l/wheel/snipgenie-0.5.0-py3.5.egg-info
2021-11-01T21:33:31,899   running install_scripts
2021-11-01T21:33:32,123   creating build/bdist.linux-armv7l/wheel/snipgenie-0.5.0.dist-info/WHEEL
2021-11-01T21:34:19,823   Building wheel for snipgenie (setup.py): finished with status 'done'
2021-11-01T21:34:20,245   Created wheel for snipgenie: filename=snipgenie-0.5.0-py3-none-any.whl size=25683862 sha256=e99637f66020eb26d7ec71cbfc4a3205e6dfab0acf98ed75880b084a4037c26c
2021-11-01T21:34:20,246   Stored in directory: /tmp/pip-ephem-wheel-cache-bccpyvnq/wheels/a5/0f/01/da1a586b4ba24a86a1879e1f565eb4e4830b11be47afa12d07
2021-11-01T21:34:20,280 Successfully built snipgenie
2021-11-01T21:34:24,961 Removed build tracker: '/tmp/pip-req-tracker-oc7vxsz9'