2021-11-10T16:04:39,590 Created temporary directory: /tmp/pip-ephem-wheel-cache-ubcyysff
2021-11-10T16:04:39,594 Created temporary directory: /tmp/pip-req-tracker-m2r3j241
2021-11-10T16:04:39,594 Initialized build tracking at /tmp/pip-req-tracker-m2r3j241
2021-11-10T16:04:39,595 Created build tracker: /tmp/pip-req-tracker-m2r3j241
2021-11-10T16:04:39,595 Entered build tracker: /tmp/pip-req-tracker-m2r3j241
2021-11-10T16:04:39,596 Created temporary directory: /tmp/pip-wheel-2pj931kr
2021-11-10T16:04:39,629 Looking in indexes: https://pypi.org/simple, https://www.piwheels.org/simple
2021-11-10T16:04:39,632 2 location(s) to search for versions of plink:
2021-11-10T16:04:39,632 * https://pypi.org/simple/plink/
2021-11-10T16:04:39,632 * https://www.piwheels.org/simple/plink/
2021-11-10T16:04:39,632 Fetching project page and analyzing links: https://pypi.org/simple/plink/
2021-11-10T16:04:39,633 Getting page https://pypi.org/simple/plink/
2021-11-10T16:04:39,635 Found index url https://pypi.org/simple
2021-11-10T16:04:39,734   Found link https://files.pythonhosted.org/packages/75/6b/dc9b4868f76e0249a7c53d9117fe76ae37d605422b458a469c2fa466ed90/plink-1.7.1.tar.gz#sha256=743f491bd2608efd7993b3fb362fdd1f9b690cce9b2cab669c3a790a5a19d60e (from https://pypi.org/simple/plink/), version: 1.7.1
2021-11-10T16:04:39,734   Found link https://files.pythonhosted.org/packages/d5/a2/b74f31430c7e0802dce364e440d8d4c62ea160830ec873f4ccf8cd8ce185/plink-1.8.tar.gz#sha256=ddb3632ea27f339fc48b07db5ee13bdd4bd54ac779b098e130105f70df09cfe6 (from https://pypi.org/simple/plink/), version: 1.8
2021-11-10T16:04:39,734   Found link https://files.pythonhosted.org/packages/7f/57/048ab431a24ef7a7d025e62cac7a050e6d27d1c46493feadb6058239494d/plink-1.9.tar.gz#sha256=cd802300b206dc7642ba12dddaa3524ed73247cbf68dc732197104d032223308 (from https://pypi.org/simple/plink/), version: 1.9
2021-11-10T16:04:39,735   Found link https://files.pythonhosted.org/packages/d0/96/930b8b70c2b1f3c06259e56b6e205e56706cb02617157531b93e205d2e8a/plink-1.9.1.tar.gz#sha256=458464fd849cc1b236df8c7a239186437515666028232eefbc91a98ad1970ed3 (from https://pypi.org/simple/plink/), version: 1.9.1
2021-11-10T16:04:39,735   Found link https://files.pythonhosted.org/packages/c6/d2/94c4ac2d1d763ae80e14d51e790e184a7aea3ce90a79000d8019a6552a28/plink-1.9.2.tar.gz#sha256=d26a2734c80b4adaf4dadbe67ec8c1e0a1b449f50de559fd6d2abf56f8de1613 (from https://pypi.org/simple/plink/), version: 1.9.2
2021-11-10T16:04:39,735   Skipping link: No binaries permitted for plink: https://files.pythonhosted.org/packages/bb/5c/d4ae488d73ea2688de1f6cc762780865a84569336e9486b2eac5849f1222/plink-2.0-py2.py3-none-any.whl#sha256=ca745e0f047b4a972829c518caec724f9db0c671e3f08129c11b7ae5bfcff0d4 (from https://pypi.org/simple/plink/)
2021-11-10T16:04:39,736   Found link https://files.pythonhosted.org/packages/1c/23/b74b302deab9abbfa7031310ebdd684b8b9e2266da803e8a9dd4a8f5f5e9/plink-2.0.tar.gz#sha256=7225ab614d142975bce55b1c20b10cbf095745bd703a8dfceca6a0696ede7c20 (from https://pypi.org/simple/plink/), version: 2.0
2021-11-10T16:04:39,736   Skipping link: No binaries permitted for plink: https://files.pythonhosted.org/packages/de/16/f58677139bca800581baf4bd68629522925ed41731754bd6c13096d7bb51/plink-2.0.1-py2.py3-none-any.whl#sha256=bcc9d53945532eaa4aac41fa99144e164c727f3983857c36cb529bbd34e32383 (from https://pypi.org/simple/plink/)
2021-11-10T16:04:39,736   Found link https://files.pythonhosted.org/packages/72/5b/d7d21ec512cfc8e9367da3a84811f65e62e9d535df010ab53947fd972761/plink-2.0.1.tar.gz#sha256=0bfffd2b89929211d9216c13a80e1b72c9039a1f449c67b77490ea7fa9930821 (from https://pypi.org/simple/plink/), version: 2.0.1
2021-11-10T16:04:39,736   Skipping link: No binaries permitted for plink: https://files.pythonhosted.org/packages/e9/c0/1fac922806dbacd921137858af746bc0b4a0bba793eeddf3a494917111a6/plink-2.1-py2.py3-none-any.whl#sha256=f7c49b4467d253185ff4a85e672f7bff8929fae048d7413e549dcc7aef9b8104 (from https://pypi.org/simple/plink/)
2021-11-10T16:04:39,737   Found link https://files.pythonhosted.org/packages/ba/c6/0830403dbca2d2ca9ade3d20b25900432a7a57767e0d178c363d8c8fb9b1/plink-2.1.tar.gz#sha256=31d13097ee8779dc7539db584db08ef8e02b13ecae0646f491058a2df0494496 (from https://pypi.org/simple/plink/), version: 2.1
2021-11-10T16:04:39,737   Skipping link: No binaries permitted for plink: https://files.pythonhosted.org/packages/c0/12/1a32754acead7b6476a7cfb087da90bbf2ae8d8386c8aaae1837aa9e9c09/plink-2.2-py2.py3-none-any.whl#sha256=4043e9f85cf0927b5f176fbe2f83a6b7c2285e939c80d3a7729e5ca332245499 (from https://pypi.org/simple/plink/)
2021-11-10T16:04:39,737   Found link https://files.pythonhosted.org/packages/15/91/55b2056a5d95338100a1d28376ed5a460b8450f256bab349edf7fffe8218/plink-2.2.tar.gz#sha256=528934d05d0eb943ab22c414eeadd04f8ec91e36ca77299e538670e9ea6153c4 (from https://pypi.org/simple/plink/), version: 2.2
2021-11-10T16:04:39,738   Skipping link: No binaries permitted for plink: https://files.pythonhosted.org/packages/72/f0/33f4412761b6b1538bf599a1d47c3b5b877b28e801023b96ad69e4fe7f54/plink-2.3-py2.py3-none-any.whl#sha256=3a329fa07e563d31bf8a2e4ce18b274862ca3753e4bf976f542c66151cc00292 (from https://pypi.org/simple/plink/)
2021-11-10T16:04:39,738   Found link https://files.pythonhosted.org/packages/52/d9/cf639e5f1b4ee3a6593f60618a3a523a14f18382f4a600fa5ed9ca25c26d/plink-2.3.tar.gz#sha256=90bb878f3a497ed95aa6c30bc64489ab770964070ac98d017f18b0a050920ea5 (from https://pypi.org/simple/plink/), version: 2.3
2021-11-10T16:04:39,738   Skipping link: No binaries permitted for plink: https://files.pythonhosted.org/packages/4e/f9/937a709691790befb44f05837ad3e97441803de4d8ce5e98d9bc843fb6e4/plink-2.3.1-py2.py3-none-any.whl#sha256=e680000fb94f481030919bd9184f9545fa1d36ae3749f26fc47147879f65b4fd (from https://pypi.org/simple/plink/)
2021-11-10T16:04:39,738   Found link https://files.pythonhosted.org/packages/d0/57/56a237e06ce42ab71ad96338efd1077c797350a919877adf2090d2829426/plink-2.3.1.tar.gz#sha256=dd55639a76c0fad1d896bf0c9e5219d9ba703ea62c4e13c280f9844344d3176c (from https://pypi.org/simple/plink/), version: 2.3.1
2021-11-10T16:04:39,739   Skipping link: No binaries permitted for plink: https://files.pythonhosted.org/packages/c8/5f/57765c16320051eafa22144a4f3e1d6df0e70a8a8282e1020c9f51a15612/plink-2.4-py2.py3-none-any.whl#sha256=93d877bb161e8d2d1b26fa6fe133d0eaff7244c8da297ea88ac05cd08c0ecec4 (from https://pypi.org/simple/plink/) (requires-python:>=3)
2021-11-10T16:04:39,739   Found link https://files.pythonhosted.org/packages/a1/81/a987a5c456a025a1ab82f568d2f9cbddd00810d4cb9fda75c0d27d487132/plink-2.4.tar.gz#sha256=82504ec23b216b61c112f05e7b3ba6c54acdc8b50e1dbea8b905b2ed85a58330 (from https://pypi.org/simple/plink/) (requires-python:>=3), version: 2.4
2021-11-10T16:04:39,740   Skipping link: No binaries permitted for plink: https://files.pythonhosted.org/packages/32/35/e4c7aaf1fb1d419655919f77dfcfd53c08c42a839a4227b3b133cfed5bb8/plink-2.4.1-py3-none-any.whl#sha256=dc3d43fea83757ea36a98ce3597c0c6874297909c6711d7b0bc87c4947ea265a (from https://pypi.org/simple/plink/) (requires-python:>=3)
2021-11-10T16:04:39,740   Found link https://files.pythonhosted.org/packages/17/cf/bf25ec25e71f4731f3e844ea857ab6e9e0f5085261506a899c8a83c2b576/plink-2.4.1.tar.gz#sha256=f8d811a28ec0b3bb7db4d83d50b4e4ef7cf67145670bd0ec2ee65386c32ce57e (from https://pypi.org/simple/plink/) (requires-python:>=3), version: 2.4.1
2021-11-10T16:04:39,741 Fetching project page and analyzing links: https://www.piwheels.org/simple/plink/
2021-11-10T16:04:39,741 Getting page https://www.piwheels.org/simple/plink/
2021-11-10T16:04:39,742 Found index url https://www.piwheels.org/simple
2021-11-10T16:04:39,928   Skipping link: No binaries permitted for plink: https://www.piwheels.org/simple/plink/plink-1.7.1-py3-none-any.whl#sha256=a4932a41003f833d8d8e93e40a2344b97bb19988079c1565ef225695d021f1ae (from https://www.piwheels.org/simple/plink/)
2021-11-10T16:04:39,928   Skipping link: No binaries permitted for plink: https://www.piwheels.org/simple/plink/plink-1.8-py3-none-any.whl#sha256=63a7c2b12b49c9ff7b59bc46986ffa19654e6b3c4ee53a46fce8698f9c056fc0 (from https://www.piwheels.org/simple/plink/)
2021-11-10T16:04:39,928   Skipping link: No binaries permitted for plink: https://www.piwheels.org/simple/plink/plink-1.9-py3-none-any.whl#sha256=6596a5dbf8af1e31813a9d9a27a197d0b938bd389a9fa3a015851577095ab202 (from https://www.piwheels.org/simple/plink/)
2021-11-10T16:04:39,929   Skipping link: No binaries permitted for plink: https://www.piwheels.org/simple/plink/plink-1.9.1-py3-none-any.whl#sha256=ce24830dff5b2f3329e27728cdc20249da327623c4a57bec70857ec1992cd8a0 (from https://www.piwheels.org/simple/plink/)
2021-11-10T16:04:39,929   Skipping link: No binaries permitted for plink: https://www.piwheels.org/simple/plink/plink-1.9.2-py3-none-any.whl#sha256=f7b2274af255d8d1533368d7a780f63865f6d0e71a290228f074c3964b26388d (from https://www.piwheels.org/simple/plink/)
2021-11-10T16:04:39,929   Skipping link: No binaries permitted for plink: https://www.piwheels.org/simple/plink/plink-2.0-py2.py3-none-any.whl#sha256=ca745e0f047b4a972829c518caec724f9db0c671e3f08129c11b7ae5bfcff0d4 (from https://www.piwheels.org/simple/plink/)
2021-11-10T16:04:39,929   Skipping link: No binaries permitted for plink: https://www.piwheels.org/simple/plink/plink-2.0.1-py2.py3-none-any.whl#sha256=bcc9d53945532eaa4aac41fa99144e164c727f3983857c36cb529bbd34e32383 (from https://www.piwheels.org/simple/plink/)
2021-11-10T16:04:39,929   Skipping link: No binaries permitted for plink: https://www.piwheels.org/simple/plink/plink-2.1-py2.py3-none-any.whl#sha256=f7c49b4467d253185ff4a85e672f7bff8929fae048d7413e549dcc7aef9b8104 (from https://www.piwheels.org/simple/plink/)
2021-11-10T16:04:39,930   Skipping link: No binaries permitted for plink: https://www.piwheels.org/simple/plink/plink-2.2-py2.py3-none-any.whl#sha256=4043e9f85cf0927b5f176fbe2f83a6b7c2285e939c80d3a7729e5ca332245499 (from https://www.piwheels.org/simple/plink/)
2021-11-10T16:04:39,930   Skipping link: No binaries permitted for plink: https://www.piwheels.org/simple/plink/plink-2.3-py2.py3-none-any.whl#sha256=3a329fa07e563d31bf8a2e4ce18b274862ca3753e4bf976f542c66151cc00292 (from https://www.piwheels.org/simple/plink/)
2021-11-10T16:04:39,930   Skipping link: No binaries permitted for plink: https://www.piwheels.org/simple/plink/plink-2.3.1-py2.py3-none-any.whl#sha256=e680000fb94f481030919bd9184f9545fa1d36ae3749f26fc47147879f65b4fd (from https://www.piwheels.org/simple/plink/)
2021-11-10T16:04:39,930   Skipping link: No binaries permitted for plink: https://www.piwheels.org/simple/plink/plink-2.4-py2.py3-none-any.whl#sha256=93d877bb161e8d2d1b26fa6fe133d0eaff7244c8da297ea88ac05cd08c0ecec4 (from https://www.piwheels.org/simple/plink/) (requires-python:>=3)
2021-11-10T16:04:39,931 Skipping link: not a file: https://www.piwheels.org/simple/plink/
2021-11-10T16:04:39,931 Skipping link: not a file: https://pypi.org/simple/plink/
2021-11-10T16:04:39,947 Given no hashes to check 1 links for project 'plink': discarding no candidates
2021-11-10T16:04:39,961 Collecting plink==2.4.1
2021-11-10T16:04:39,963   Created temporary directory: /tmp/pip-unpack-yxkuimct
2021-11-10T16:04:40,005   Downloading plink-2.4.1.tar.gz (264 kB)
2021-11-10T16:04:40,222   Added plink==2.4.1 from https://files.pythonhosted.org/packages/17/cf/bf25ec25e71f4731f3e844ea857ab6e9e0f5085261506a899c8a83c2b576/plink-2.4.1.tar.gz#sha256=f8d811a28ec0b3bb7db4d83d50b4e4ef7cf67145670bd0ec2ee65386c32ce57e to build tracker '/tmp/pip-req-tracker-m2r3j241'
2021-11-10T16:04:40,224     Running setup.py (path:/tmp/pip-wheel-2pj931kr/plink_181e686387a447dba0a96b62ee265986/setup.py) egg_info for package plink
2021-11-10T16:04:40,224     Created temporary directory: /tmp/pip-pip-egg-info-sxk5uuz5
2021-11-10T16:04:40,225     Running command python setup.py egg_info
2021-11-10T16:04:41,153     running egg_info
2021-11-10T16:04:41,155     creating /tmp/pip-pip-egg-info-sxk5uuz5/plink.egg-info
2021-11-10T16:04:41,156     writing /tmp/pip-pip-egg-info-sxk5uuz5/plink.egg-info/PKG-INFO
2021-11-10T16:04:41,158     writing dependency_links to /tmp/pip-pip-egg-info-sxk5uuz5/plink.egg-info/dependency_links.txt
2021-11-10T16:04:41,160     writing entry points to /tmp/pip-pip-egg-info-sxk5uuz5/plink.egg-info/entry_points.txt
2021-11-10T16:04:41,161     writing top-level names to /tmp/pip-pip-egg-info-sxk5uuz5/plink.egg-info/top_level.txt
2021-11-10T16:04:41,163     writing manifest file '/tmp/pip-pip-egg-info-sxk5uuz5/plink.egg-info/SOURCES.txt'
2021-11-10T16:04:41,303     reading manifest file '/tmp/pip-pip-egg-info-sxk5uuz5/plink.egg-info/SOURCES.txt'
2021-11-10T16:04:41,308     writing manifest file '/tmp/pip-pip-egg-info-sxk5uuz5/plink.egg-info/SOURCES.txt'
2021-11-10T16:04:41,372   Source in /tmp/pip-wheel-2pj931kr/plink_181e686387a447dba0a96b62ee265986 has version 2.4.1, which satisfies requirement plink==2.4.1 from https://files.pythonhosted.org/packages/17/cf/bf25ec25e71f4731f3e844ea857ab6e9e0f5085261506a899c8a83c2b576/plink-2.4.1.tar.gz#sha256=f8d811a28ec0b3bb7db4d83d50b4e4ef7cf67145670bd0ec2ee65386c32ce57e
2021-11-10T16:04:41,373   Removed plink==2.4.1 from https://files.pythonhosted.org/packages/17/cf/bf25ec25e71f4731f3e844ea857ab6e9e0f5085261506a899c8a83c2b576/plink-2.4.1.tar.gz#sha256=f8d811a28ec0b3bb7db4d83d50b4e4ef7cf67145670bd0ec2ee65386c32ce57e from build tracker '/tmp/pip-req-tracker-m2r3j241'
2021-11-10T16:04:41,379 Created temporary directory: /tmp/pip-unpack-tqrj_h6m
2021-11-10T16:04:41,380 Building wheels for collected packages: plink
2021-11-10T16:04:41,384   Created temporary directory: /tmp/pip-wheel-93_vgno8
2021-11-10T16:04:41,384   Building wheel for plink (setup.py): started
2021-11-10T16:04:41,384   Destination directory: /tmp/pip-wheel-93_vgno8
2021-11-10T16:04:41,385   Running command /usr/bin/python3 -u -c 'import io, os, sys, setuptools, tokenize; sys.argv[0] = '"'"'/tmp/pip-wheel-2pj931kr/plink_181e686387a447dba0a96b62ee265986/setup.py'"'"'; __file__='"'"'/tmp/pip-wheel-2pj931kr/plink_181e686387a447dba0a96b62ee265986/setup.py'"'"';f = getattr(tokenize, '"'"'open'"'"', open)(__file__) if os.path.exists(__file__) else io.StringIO('"'"'from setuptools import setup; setup()'"'"');code = f.read().replace('"'"'\r\n'"'"', '"'"'\n'"'"');f.close();exec(compile(code, __file__, '"'"'exec'"'"'))' bdist_wheel -d /tmp/pip-wheel-93_vgno8
2021-11-10T16:04:42,291   running bdist_wheel
2021-11-10T16:04:43,178   running build
2021-11-10T16:04:43,178   running build_py
2021-11-10T16:04:43,303   creating build
2021-11-10T16:04:43,303   creating build/lib
2021-11-10T16:04:43,304   creating build/lib/plink
2021-11-10T16:04:43,305   copying plink_src/gui.py -> build/lib/plink
2021-11-10T16:04:43,307   copying plink_src/smooth.py -> build/lib/plink
2021-11-10T16:04:43,310   copying plink_src/app.py -> build/lib/plink
2021-11-10T16:04:43,312   copying plink_src/__init__.py -> build/lib/plink
2021-11-10T16:04:43,313   copying plink_src/vertex.py -> build/lib/plink
2021-11-10T16:04:43,316   copying plink_src/ipython_tools.py -> build/lib/plink
2021-11-10T16:04:43,318   copying plink_src/colors.py -> build/lib/plink
2021-11-10T16:04:43,320   copying plink_src/version.py -> build/lib/plink
2021-11-10T16:04:43,322   copying plink_src/manager.py -> build/lib/plink
2021-11-10T16:04:43,326   copying plink_src/crossings.py -> build/lib/plink
2021-11-10T16:04:43,329   copying plink_src/editor.py -> build/lib/plink
2021-11-10T16:04:43,333   copying plink_src/dialog.py -> build/lib/plink
2021-11-10T16:04:43,335   copying plink_src/viewer.py -> build/lib/plink
2021-11-10T16:04:43,338   copying plink_src/arrow.py -> build/lib/plink
2021-11-10T16:04:43,340   copying plink_src/canvasvg.py -> build/lib/plink
2021-11-10T16:04:43,348   creating build/lib/plink/doc
2021-11-10T16:04:43,349   copying plink_src/doc/installing.html -> build/lib/plink/doc
2021-11-10T16:04:43,352   copying plink_src/doc/objects.inv -> build/lib/plink/doc
2021-11-10T16:04:43,354   copying plink_src/doc/index.html -> build/lib/plink/doc
2021-11-10T16:04:43,357   copying plink_src/doc/searchindex.js -> build/lib/plink/doc
2021-11-10T16:04:43,359   copying plink_src/doc/py-modindex.html -> build/lib/plink/doc
2021-11-10T16:04:43,362   copying plink_src/doc/.buildinfo -> build/lib/plink/doc
2021-11-10T16:04:43,364   copying plink_src/doc/genindex.html -> build/lib/plink/doc
2021-11-10T16:04:43,367   copying plink_src/doc/search.html -> build/lib/plink/doc
2021-11-10T16:04:43,370   copying plink_src/doc/plink.html -> build/lib/plink/doc
2021-11-10T16:04:43,374   creating build/lib/plink/doc/_sources
2021-11-10T16:04:43,375   copying plink_src/doc/_sources/installing.rst.txt -> build/lib/plink/doc/_sources
2021-11-10T16:04:43,377   copying plink_src/doc/_sources/plink.rst.txt -> build/lib/plink/doc/_sources
2021-11-10T16:04:43,379   copying plink_src/doc/_sources/index.rst.txt -> build/lib/plink/doc/_sources
2021-11-10T16:04:43,382   creating build/lib/plink/doc/_static
2021-11-10T16:04:43,383   copying plink_src/doc/_static/searchtools.js -> build/lib/plink/doc/_static
2021-11-10T16:04:43,387   copying plink_src/doc/_static/doctools.js -> build/lib/plink/doc/_static
2021-11-10T16:04:43,390   copying plink_src/doc/_static/file.png -> build/lib/plink/doc/_static
2021-11-10T16:04:43,392   copying plink_src/doc/_static/default.css -> build/lib/plink/doc/_static
2021-11-10T16:04:43,395   copying plink_src/doc/_static/language_data.js -> build/lib/plink/doc/_static
2021-11-10T16:04:43,398   copying plink_src/doc/_static/plus.png -> build/lib/plink/doc/_static
2021-11-10T16:04:43,400   copying plink_src/doc/_static/jquery.js -> build/lib/plink/doc/_static
2021-11-10T16:04:43,407   copying plink_src/doc/_static/sidebar.js -> build/lib/plink/doc/_static
2021-11-10T16:04:43,410   copying plink_src/doc/_static/underscore-1.3.1.js -> build/lib/plink/doc/_static
2021-11-10T16:04:43,414   copying plink_src/doc/_static/pygments.css -> build/lib/plink/doc/_static
2021-11-10T16:04:43,417   copying plink_src/doc/_static/underscore.js -> build/lib/plink/doc/_static
2021-11-10T16:04:43,420   copying plink_src/doc/_static/minus.png -> build/lib/plink/doc/_static
2021-11-10T16:04:43,422   copying plink_src/doc/_static/underscore-1.13.1.js -> build/lib/plink/doc/_static
2021-11-10T16:04:43,428   copying plink_src/doc/_static/basic.css -> build/lib/plink/doc/_static
2021-11-10T16:04:43,431   copying plink_src/doc/_static/documentation_options.js -> build/lib/plink/doc/_static
2021-11-10T16:04:43,433   copying plink_src/doc/_static/classic.css -> build/lib/plink/doc/_static
2021-11-10T16:04:43,436   copying plink_src/doc/_static/jquery-3.5.1.js -> build/lib/plink/doc/_static
2021-11-10T16:04:43,451   creating build/lib/plink/doc/_images
2021-11-10T16:04:43,452   copying plink_src/doc/_images/plink-action.png -> build/lib/plink/doc/_images
2021-11-10T16:04:44,406   running build_docs
2021-11-10T16:04:44,553   Traceback (most recent call last):
2021-11-10T16:04:44,553     File "setup.py", line 159, in <module>
2021-11-10T16:04:44,553       keywords = 'knot, link, editor, SnapPy',
2021-11-10T16:04:44,554     File "/usr/local/lib/python3.7/dist-packages/setuptools/__init__.py", line 153, in setup
2021-11-10T16:04:44,554       return distutils.core.setup(**attrs)
2021-11-10T16:04:44,554     File "/usr/lib/python3.7/distutils/core.py", line 148, in setup
2021-11-10T16:04:44,554       dist.run_commands()
2021-11-10T16:04:44,554     File "/usr/lib/python3.7/distutils/dist.py", line 966, in run_commands
2021-11-10T16:04:44,555       self.run_command(cmd)
2021-11-10T16:04:44,555     File "/usr/lib/python3.7/distutils/dist.py", line 985, in run_command
2021-11-10T16:04:44,555       cmd_obj.run()
2021-11-10T16:04:44,556     File "setup.py", line 34, in run
2021-11-10T16:04:44,556       sphinx_cmd = load_entry_point('Sphinx>=0.6.1', 'console_scripts', 'sphinx-build')
2021-11-10T16:04:44,556     File "/usr/local/lib/python3.7/dist-packages/pkg_resources/__init__.py", line 474, in load_entry_point
2021-11-10T16:04:44,557       return get_distribution(dist).load_entry_point(group, name)
2021-11-10T16:04:44,557     File "/usr/local/lib/python3.7/dist-packages/pkg_resources/__init__.py", line 466, in get_distribution
2021-11-10T16:04:44,557       dist = get_provider(dist)
2021-11-10T16:04:44,557     File "/usr/local/lib/python3.7/dist-packages/pkg_resources/__init__.py", line 342, in get_provider
2021-11-10T16:04:44,558       return working_set.find(moduleOrReq) or require(str(moduleOrReq))[0]
2021-11-10T16:04:44,558     File "/usr/local/lib/python3.7/dist-packages/pkg_resources/__init__.py", line 886, in require
2021-11-10T16:04:44,558       needed = self.resolve(parse_requirements(requirements))
2021-11-10T16:04:44,559     File "/usr/local/lib/python3.7/dist-packages/pkg_resources/__init__.py", line 772, in resolve
2021-11-10T16:04:44,559       raise DistributionNotFound(req, requirers)
2021-11-10T16:04:44,559   pkg_resources.DistributionNotFound: The 'Sphinx>=0.6.1' distribution was not found and is required by the application
2021-11-10T16:04:44,613   Traceback (most recent call last):
2021-11-10T16:04:44,613     File "/tmp/pip-wheel-2pj931kr/plink_181e686387a447dba0a96b62ee265986/setup.py", line 57, in check_call
2021-11-10T16:04:44,614       subprocess.check_call(args)
2021-11-10T16:04:44,614     File "/usr/lib/python3.7/subprocess.py", line 347, in check_call
2021-11-10T16:04:44,615       raise CalledProcessError(retcode, cmd)
2021-11-10T16:04:44,615   subprocess.CalledProcessError: Command '['/usr/bin/python3', 'setup.py', 'build_docs']' returned non-zero exit status 1.

2021-11-10T16:04:44,615   During handling of the above exception, another exception occurred:

2021-11-10T16:04:44,615   Traceback (most recent call last):
2021-11-10T16:04:44,616     File "<string>", line 1, in <module>
2021-11-10T16:04:44,616     File "/tmp/pip-wheel-2pj931kr/plink_181e686387a447dba0a96b62ee265986/setup.py", line 159, in <module>
2021-11-10T16:04:44,616       keywords = 'knot, link, editor, SnapPy',
2021-11-10T16:04:44,616     File "/usr/local/lib/python3.7/dist-packages/setuptools/__init__.py", line 153, in setup
2021-11-10T16:04:44,616       return distutils.core.setup(**attrs)
2021-11-10T16:04:44,617     File "/usr/lib/python3.7/distutils/core.py", line 148, in setup
2021-11-10T16:04:44,617       dist.run_commands()
2021-11-10T16:04:44,617     File "/usr/lib/python3.7/distutils/dist.py", line 966, in run_commands
2021-11-10T16:04:44,618       self.run_command(cmd)
2021-11-10T16:04:44,618     File "/usr/lib/python3.7/distutils/dist.py", line 985, in run_command
2021-11-10T16:04:44,620       cmd_obj.run()
2021-11-10T16:04:44,620     File "/tmp/pip-wheel-2pj931kr/plink_181e686387a447dba0a96b62ee265986/setup.py", line 70, in run
2021-11-10T16:04:44,620       check_call([python, 'setup.py', 'build_docs'])
2021-11-10T16:04:44,620     File "/tmp/pip-wheel-2pj931kr/plink_181e686387a447dba0a96b62ee265986/setup.py", line 61, in check_call
2021-11-10T16:04:44,621       raise RuntimeError(command + ' failed for ' + executable)
2021-11-10T16:04:44,621   RuntimeError: build_docs failed for /usr/bin/python3
2021-11-10T16:04:44,681   Building wheel for plink (setup.py): finished with status 'error'
2021-11-10T16:04:44,682   ERROR: Failed building wheel for plink
2021-11-10T16:04:44,683   Running setup.py clean for plink
2021-11-10T16:04:44,683   Running command /usr/bin/python3 -u -c 'import io, os, sys, setuptools, tokenize; sys.argv[0] = '"'"'/tmp/pip-wheel-2pj931kr/plink_181e686387a447dba0a96b62ee265986/setup.py'"'"'; __file__='"'"'/tmp/pip-wheel-2pj931kr/plink_181e686387a447dba0a96b62ee265986/setup.py'"'"';f = getattr(tokenize, '"'"'open'"'"', open)(__file__) if os.path.exists(__file__) else io.StringIO('"'"'from setuptools import setup; setup()'"'"');code = f.read().replace('"'"'\r\n'"'"', '"'"'\n'"'"');f.close();exec(compile(code, __file__, '"'"'exec'"'"'))' clean --all
2021-11-10T16:04:45,582   usage: setup.py [global_opts] cmd1 [cmd1_opts] [cmd2 [cmd2_opts] ...]
2021-11-10T16:04:45,583      or: setup.py --help [cmd1 cmd2 ...]
2021-11-10T16:04:45,583      or: setup.py --help-commands
2021-11-10T16:04:45,584      or: setup.py cmd --help

2021-11-10T16:04:45,584   error: option --all not recognized
2021-11-10T16:04:45,636   ERROR: Failed cleaning build dir for plink
2021-11-10T16:04:45,638 Failed to build plink
2021-11-10T16:04:45,639 ERROR: Failed to build one or more wheels
2021-11-10T16:04:45,639 Exception information:
2021-11-10T16:04:45,639 Traceback (most recent call last):
2021-11-10T16:04:45,639   File "/usr/local/lib/python3.7/dist-packages/pip/_internal/cli/base_command.py", line 180, in _main
2021-11-10T16:04:45,639     status = self.run(options, args)
2021-11-10T16:04:45,639   File "/usr/local/lib/python3.7/dist-packages/pip/_internal/cli/req_command.py", line 205, in wrapper
2021-11-10T16:04:45,639     return func(self, options, args)
2021-11-10T16:04:45,639   File "/usr/local/lib/python3.7/dist-packages/pip/_internal/commands/wheel.py", line 175, in run
2021-11-10T16:04:45,639     "Failed to build one or more wheels"
2021-11-10T16:04:45,639 pip._internal.exceptions.CommandError: Failed to build one or more wheels
2021-11-10T16:04:45,642 Removed build tracker: '/tmp/pip-req-tracker-m2r3j241'