2021-11-19T14:30:47,230 Created temporary directory: /tmp/pip-ephem-wheel-cache-bz_tw17c
2021-11-19T14:30:47,233 Created temporary directory: /tmp/pip-req-tracker-lmz5ftro
2021-11-19T14:30:47,234 Initialized build tracking at /tmp/pip-req-tracker-lmz5ftro
2021-11-19T14:30:47,234 Created build tracker: /tmp/pip-req-tracker-lmz5ftro
2021-11-19T14:30:47,234 Entered build tracker: /tmp/pip-req-tracker-lmz5ftro
2021-11-19T14:30:47,235 Created temporary directory: /tmp/pip-wheel-yc0ifkri
2021-11-19T14:30:47,266 Looking in indexes: https://pypi.org/simple, https://www.piwheels.org/simple
2021-11-19T14:30:47,269 2 location(s) to search for versions of cidc-ngs-pipeline-api:
2021-11-19T14:30:47,269 * https://pypi.org/simple/cidc-ngs-pipeline-api/
2021-11-19T14:30:47,269 * https://www.piwheels.org/simple/cidc-ngs-pipeline-api/
2021-11-19T14:30:47,270 Fetching project page and analyzing links: https://pypi.org/simple/cidc-ngs-pipeline-api/
2021-11-19T14:30:47,270 Getting page https://pypi.org/simple/cidc-ngs-pipeline-api/
2021-11-19T14:30:47,272 Found index url https://pypi.org/simple
2021-11-19T14:30:47,375   Found link https://files.pythonhosted.org/packages/eb/72/048ba0fefabe1a6113dda9f0dd2ef49e48baa3a2192a383fe0f7f81c301b/cidc_ngs_pipeline_api-0.1.0.tar.gz#sha256=329a3c40250acbbac0c692c3c54241917546105fd227df9994c1fcf2da42bff5 (from https://pypi.org/simple/cidc-ngs-pipeline-api/) (requires-python:>=3.6), version: 0.1.0
2021-11-19T14:30:47,376   Found link https://files.pythonhosted.org/packages/9c/a5/33b4625004f55b0de43870d1ed4d15a1a006f7007e8653c70966254a7ea7/cidc_ngs_pipeline_api-0.1.1.tar.gz#sha256=0e0f6e94e05b22145c5a47573bfd5d58449bf7e4f87cf552b7cadfdabf9863ea (from https://pypi.org/simple/cidc-ngs-pipeline-api/) (requires-python:>=3.6), version: 0.1.1
2021-11-19T14:30:47,376   Found link https://files.pythonhosted.org/packages/53/7f/eea842e5d587200410294d40f7917fc2c62dee8956547bfb89bafb00d6e7/cidc_ngs_pipeline_api-0.1.2.tar.gz#sha256=79c4b9690bec471648278566682a9f09ffc71a2c5eb57e57741ea359f87ab4af (from https://pypi.org/simple/cidc-ngs-pipeline-api/) (requires-python:>=3.6), version: 0.1.2
2021-11-19T14:30:47,377   Found link https://files.pythonhosted.org/packages/28/b3/a8ee852b1bec956480c6c975bf61b08be23c22abc84c0111b1312d528dc1/cidc_ngs_pipeline_api-0.1.3.tar.gz#sha256=c2a9197d8f020fed8914b0c6e505d7793ba82cde83a9d0746631a735efb93801 (from https://pypi.org/simple/cidc-ngs-pipeline-api/) (requires-python:>=3.6), version: 0.1.3
2021-11-19T14:30:47,378   Found link https://files.pythonhosted.org/packages/bf/42/6b9fc81f0540d796a21cfae33bf3cb1607a962997764dfd9bc97ecadd002/cidc_ngs_pipeline_api-0.1.4.tar.gz#sha256=cfa762fbd4acceadc1a60134ac0828d263ea97f3e55cb2a4ba4de060fb7682d6 (from https://pypi.org/simple/cidc-ngs-pipeline-api/) (requires-python:>=3.6), version: 0.1.4
2021-11-19T14:30:47,378   Found link https://files.pythonhosted.org/packages/16/30/28d09cf5bea6cee5bab4e2c4a0105648372be2e13cf85735c6dd0da2ac73/cidc_ngs_pipeline_api-0.1.5.tar.gz#sha256=7f1918b7ab1eff39c43b99f54bd80fe136257ded8883022a86f4f85bda4d905c (from https://pypi.org/simple/cidc-ngs-pipeline-api/) (requires-python:>=3.6), version: 0.1.5
2021-11-19T14:30:47,378   Skipping link: No binaries permitted for cidc-ngs-pipeline-api: https://files.pythonhosted.org/packages/51/a6/9750032f7be458ef7fe5ce8c961ef0d6d6dd776383c288db4c754bf6fc62/cidc_ngs_pipeline_api-0.1.6-py3-none-any.whl#sha256=8ff130bde44078018f1fedf3a4e07c3c9adc0230f2a6dbb44e4266e372a26610 (from https://pypi.org/simple/cidc-ngs-pipeline-api/) (requires-python:>=3.6)
2021-11-19T14:30:47,379   Found link https://files.pythonhosted.org/packages/9b/0e/35c8e8177092fc1576ae22518fdc5d10388800441a58c277fe9c9b132bbc/cidc_ngs_pipeline_api-0.1.6.tar.gz#sha256=486eee7c3b727941787aeffaeed36c28cdde5c0eec271834b822e322a59498e8 (from https://pypi.org/simple/cidc-ngs-pipeline-api/) (requires-python:>=3.6), version: 0.1.6
2021-11-19T14:30:47,379   Skipping link: No binaries permitted for cidc-ngs-pipeline-api: https://files.pythonhosted.org/packages/d1/05/c0f38ac0085f3436b057103081084e30dc37ded05668d1cde90a263495a5/cidc_ngs_pipeline_api-0.1.7-py3-none-any.whl#sha256=9673d25a94b558c2d047aee9ed8f6ad333d14bbf52bc00fc17000fe2ba928c5b (from https://pypi.org/simple/cidc-ngs-pipeline-api/) (requires-python:>=3.6)
2021-11-19T14:30:47,380   Found link https://files.pythonhosted.org/packages/8a/c0/32dc21dd954e2612258def8fdf7fda279d6794fd7f7d169bce2f5a031891/cidc_ngs_pipeline_api-0.1.7.tar.gz#sha256=f1e6e93f9cb604b3da31cf676e708dd5b29f085af51276f63dc93ad723eb6de3 (from https://pypi.org/simple/cidc-ngs-pipeline-api/) (requires-python:>=3.6), version: 0.1.7
2021-11-19T14:30:47,380   Skipping link: No binaries permitted for cidc-ngs-pipeline-api: https://files.pythonhosted.org/packages/fe/6f/4d15d1f2f8457ccbbdefdf1f979a2a88d41ff8a3f71f17f47dddf462f53e/cidc_ngs_pipeline_api-0.1.8-py3-none-any.whl#sha256=f1a1b7a30efd367913cf51384b977187657b938c421bf6f9051902ec2e61a02e (from https://pypi.org/simple/cidc-ngs-pipeline-api/) (requires-python:>=3.6)
2021-11-19T14:30:47,381   Found link https://files.pythonhosted.org/packages/67/cd/f4c3ebdf6dfaae590239ef3b943ffe08d7e101bb7934a484fdd39cc96f01/cidc_ngs_pipeline_api-0.1.8.tar.gz#sha256=dc43f767dd0b8a1ca3767089b11970ac10bb8eae2beda1173147abc32d85ba29 (from https://pypi.org/simple/cidc-ngs-pipeline-api/) (requires-python:>=3.6), version: 0.1.8
2021-11-19T14:30:47,381   Skipping link: No binaries permitted for cidc-ngs-pipeline-api: https://files.pythonhosted.org/packages/74/59/619c739c427a54e86e396e0de9947a2aeef18505641afc8b53ff262a985b/cidc_ngs_pipeline_api-0.1.9-py3-none-any.whl#sha256=1fcbbfe91fe74032d09b845f152724b123a1eb21b16c477162f09888de350f2a (from https://pypi.org/simple/cidc-ngs-pipeline-api/) (requires-python:>=3.6)
2021-11-19T14:30:47,382   Found link https://files.pythonhosted.org/packages/53/54/b2534798bf41979d520d9660ea543402d42eb39fc73cb4db89195d10c390/cidc_ngs_pipeline_api-0.1.9.tar.gz#sha256=d3a03b24304dd4582a7227ab472d27085be9d9c06a0c031c83cfa9ece772d87d (from https://pypi.org/simple/cidc-ngs-pipeline-api/) (requires-python:>=3.6), version: 0.1.9
2021-11-19T14:30:47,382   Skipping link: No binaries permitted for cidc-ngs-pipeline-api: https://files.pythonhosted.org/packages/11/6d/75012ca8ef0a076f50b7d69e71a1994751c16d21263a05a380f0af9a7249/cidc_ngs_pipeline_api-0.1.10-py3-none-any.whl#sha256=5a97e70b5a97be756021c15a0cd5f4e4bd2334415e0e4765fcf2086d45dc1ddb (from https://pypi.org/simple/cidc-ngs-pipeline-api/) (requires-python:>=3.6)
2021-11-19T14:30:47,383   Found link https://files.pythonhosted.org/packages/00/45/46ec726ac7ba1f6dc18f99b99d0435da762c9ed42d149c367733482590a9/cidc_ngs_pipeline_api-0.1.10.tar.gz#sha256=278e76f6fbb384d34a1fc7b8bfd3249563b90e35eca2d23947e6d99e13441aa3 (from https://pypi.org/simple/cidc-ngs-pipeline-api/) (requires-python:>=3.6), version: 0.1.10
2021-11-19T14:30:47,383   Skipping link: No binaries permitted for cidc-ngs-pipeline-api: https://files.pythonhosted.org/packages/34/0c/c0f2947e59ead96372bf41722e917f2e6ceff981a26200e0a1535aeb5ed6/cidc_ngs_pipeline_api-0.1.11-py3-none-any.whl#sha256=b78c3c31fdeadfd8dde14cc0c0818801c92560efd4422676c09a7cba564bcbfa (from https://pypi.org/simple/cidc-ngs-pipeline-api/) (requires-python:>=3.6)
2021-11-19T14:30:47,383   Found link https://files.pythonhosted.org/packages/73/64/96e700b31b4cce120604df67c0758aab90e3b4e77f3289605d930b92da18/cidc_ngs_pipeline_api-0.1.11.tar.gz#sha256=e3772e42435bd8ef0b2ad892a0fca3fc4e95d018d78bb7dd7778d1dc03301518 (from https://pypi.org/simple/cidc-ngs-pipeline-api/) (requires-python:>=3.6), version: 0.1.11
2021-11-19T14:30:47,384   Skipping link: No binaries permitted for cidc-ngs-pipeline-api: https://files.pythonhosted.org/packages/2c/1a/cb0a78341cecbce21dbd16f5f0ce6c37be2b64232055e45dbd3b7a0c8b9a/cidc_ngs_pipeline_api-0.1.12-py3-none-any.whl#sha256=f041d309a7ee3511fb822d5a95f87ee0eafb2ad4bc52077e900ac8a75dda920d (from https://pypi.org/simple/cidc-ngs-pipeline-api/) (requires-python:>=3.6)
2021-11-19T14:30:47,384   Found link https://files.pythonhosted.org/packages/06/18/23c4cc4aac0e61503c80ab34a6d2b5378e3c27a1798fd11ef2562654697b/cidc_ngs_pipeline_api-0.1.12.tar.gz#sha256=f8f8f1766724421992a621e2441f8c587565f9235359074477750850b05c089f (from https://pypi.org/simple/cidc-ngs-pipeline-api/) (requires-python:>=3.6), version: 0.1.12
2021-11-19T14:30:47,385   Skipping link: No binaries permitted for cidc-ngs-pipeline-api: https://files.pythonhosted.org/packages/d8/c8/fd048b2089c88eedd48031d44b8b83e47d07de3a1c4fb5b5ed3f3a206968/cidc_ngs_pipeline_api-0.1.13-py3-none-any.whl#sha256=703ae09096ab89266eb8750607703c15922feb2888cca44e5ebee3c4ff6d1015 (from https://pypi.org/simple/cidc-ngs-pipeline-api/) (requires-python:>=3.6)
2021-11-19T14:30:47,385   Found link https://files.pythonhosted.org/packages/cb/4c/2533adac10d2414ab42c550dae76f8367333cb7573237be1106900ec06c1/cidc_ngs_pipeline_api-0.1.13.tar.gz#sha256=09606df93b7568539da65a6c99914392d356a991ab77063b1dc28f30a944e7c9 (from https://pypi.org/simple/cidc-ngs-pipeline-api/) (requires-python:>=3.6), version: 0.1.13
2021-11-19T14:30:47,385   Skipping link: No binaries permitted for cidc-ngs-pipeline-api: https://files.pythonhosted.org/packages/9d/01/c269abfe16aadfb81ea8d738b6c92568ac87599ad76e597da97fdc5af71e/cidc_ngs_pipeline_api-0.1.14-py3-none-any.whl#sha256=46ff3f3504c438048a63e3a411b2d7b23a04c18e7a6ca2f1ddfa861c04401f1e (from https://pypi.org/simple/cidc-ngs-pipeline-api/) (requires-python:>=3.6)
2021-11-19T14:30:47,386   Found link https://files.pythonhosted.org/packages/e3/51/f3313023607a56ae7c977d33bfb4d43d7d3719277908d42e1e4d15c192f7/cidc_ngs_pipeline_api-0.1.14.tar.gz#sha256=0fc07115fad5051b8904977aa3850e456aa513d29da04dac697406df293161a8 (from https://pypi.org/simple/cidc-ngs-pipeline-api/) (requires-python:>=3.6), version: 0.1.14
2021-11-19T14:30:47,386   Skipping link: No binaries permitted for cidc-ngs-pipeline-api: https://files.pythonhosted.org/packages/c9/c7/bde8fb3f6207adeda0e3562b57de2d132906dc09e64c6c8318b7fbb5bb2e/cidc_ngs_pipeline_api-0.1.15-py3-none-any.whl#sha256=5b66ea1ae5942c8310f3e550c580781383cd4435f851090a92c222c8f8618f69 (from https://pypi.org/simple/cidc-ngs-pipeline-api/) (requires-python:>=3.6)
2021-11-19T14:30:47,387   Found link https://files.pythonhosted.org/packages/04/b3/e3ac098be56ebbacf6957d5ae70d391536c5e611e720203a7f4eb7e2c333/cidc_ngs_pipeline_api-0.1.15.tar.gz#sha256=06f5d6255f3417abbbc0df9942b3f78649fb8b8b4a56de1947b77b246d87a054 (from https://pypi.org/simple/cidc-ngs-pipeline-api/) (requires-python:>=3.6), version: 0.1.15
2021-11-19T14:30:47,387   Skipping link: No binaries permitted for cidc-ngs-pipeline-api: https://files.pythonhosted.org/packages/2d/57/cf51b9eafe077f86fa0f6cb26ebae7350fce033210bc9941c57a64c9af45/cidc_ngs_pipeline_api-0.1.16-py3-none-any.whl#sha256=b97fd28f9b4a7200323f98240ee79cf8884bbc0447630ef6d94ea6958eaf6ec4 (from https://pypi.org/simple/cidc-ngs-pipeline-api/) (requires-python:>=3.6)
2021-11-19T14:30:47,388   Found link https://files.pythonhosted.org/packages/a4/34/c1ecf28e2621998c8e2101621a5289aabc67c7ca15dc2113cc85dbdeb308/cidc_ngs_pipeline_api-0.1.16.tar.gz#sha256=8363960c3f084dab60d5dcaf73f3aaa2680ba5ab1168e67c65f377d36d5400a6 (from https://pypi.org/simple/cidc-ngs-pipeline-api/) (requires-python:>=3.6), version: 0.1.16
2021-11-19T14:30:47,388 Fetching project page and analyzing links: https://www.piwheels.org/simple/cidc-ngs-pipeline-api/
2021-11-19T14:30:47,388 Getting page https://www.piwheels.org/simple/cidc-ngs-pipeline-api/
2021-11-19T14:30:47,389 Found index url https://www.piwheels.org/simple
2021-11-19T14:30:47,570   Skipping link: No binaries permitted for cidc-ngs-pipeline-api: https://www.piwheels.org/simple/cidc-ngs-pipeline-api/cidc_ngs_pipeline_api-0.1.10-py3-none-any.whl#sha256=5a97e70b5a97be756021c15a0cd5f4e4bd2334415e0e4765fcf2086d45dc1ddb (from https://www.piwheels.org/simple/cidc-ngs-pipeline-api/) (requires-python:>=3.6)
2021-11-19T14:30:47,570   Skipping link: No binaries permitted for cidc-ngs-pipeline-api: https://www.piwheels.org/simple/cidc-ngs-pipeline-api/cidc_ngs_pipeline_api-0.1.11-py3-none-any.whl#sha256=b78c3c31fdeadfd8dde14cc0c0818801c92560efd4422676c09a7cba564bcbfa (from https://www.piwheels.org/simple/cidc-ngs-pipeline-api/) (requires-python:>=3.6)
2021-11-19T14:30:47,570   Skipping link: No binaries permitted for cidc-ngs-pipeline-api: https://www.piwheels.org/simple/cidc-ngs-pipeline-api/cidc_ngs_pipeline_api-0.1.12-py3-none-any.whl#sha256=f041d309a7ee3511fb822d5a95f87ee0eafb2ad4bc52077e900ac8a75dda920d (from https://www.piwheels.org/simple/cidc-ngs-pipeline-api/) (requires-python:>=3.6)
2021-11-19T14:30:47,571   Skipping link: No binaries permitted for cidc-ngs-pipeline-api: https://www.piwheels.org/simple/cidc-ngs-pipeline-api/cidc_ngs_pipeline_api-0.1.13-py3-none-any.whl#sha256=703ae09096ab89266eb8750607703c15922feb2888cca44e5ebee3c4ff6d1015 (from https://www.piwheels.org/simple/cidc-ngs-pipeline-api/) (requires-python:>=3.6)
2021-11-19T14:30:47,571   Skipping link: No binaries permitted for cidc-ngs-pipeline-api: https://www.piwheels.org/simple/cidc-ngs-pipeline-api/cidc_ngs_pipeline_api-0.1.14-py3-none-any.whl#sha256=0fd6f2323195056245234a26945b3b3585304c5f3b17e586ee93cf1b648767e4 (from https://www.piwheels.org/simple/cidc-ngs-pipeline-api/) (requires-python:>=3.6)
2021-11-19T14:30:47,571   Skipping link: No binaries permitted for cidc-ngs-pipeline-api: https://www.piwheels.org/simple/cidc-ngs-pipeline-api/cidc_ngs_pipeline_api-0.1.15-py3-none-any.whl#sha256=690df872380f5f0872c5e389cf1756618910c2a95656552927f1d0e7c555e31d (from https://www.piwheels.org/simple/cidc-ngs-pipeline-api/) (requires-python:>=3.6)
2021-11-19T14:30:47,571   Skipping link: No binaries permitted for cidc-ngs-pipeline-api: https://www.piwheels.org/simple/cidc-ngs-pipeline-api/cidc_ngs_pipeline_api-0.1.3-py3-none-any.whl#sha256=84f6e63c8d0e4b5d15de07393cdc599b8e92bcd963f489f77e3672fad846d7ee (from https://www.piwheels.org/simple/cidc-ngs-pipeline-api/) (requires-python:>=3.6)
2021-11-19T14:30:47,572   Skipping link: No binaries permitted for cidc-ngs-pipeline-api: https://www.piwheels.org/simple/cidc-ngs-pipeline-api/cidc_ngs_pipeline_api-0.1.4-py3-none-any.whl#sha256=3f18759c19e177d09ebbda9719d349cd47d03e0fdaded7cbc3d5b23ae4abee22 (from https://www.piwheels.org/simple/cidc-ngs-pipeline-api/) (requires-python:>=3.6)
2021-11-19T14:30:47,572   Skipping link: No binaries permitted for cidc-ngs-pipeline-api: https://www.piwheels.org/simple/cidc-ngs-pipeline-api/cidc_ngs_pipeline_api-0.1.5-py3-none-any.whl#sha256=632f717b48179ca9ae33e1f121af699db3ee3ef1668e5223db1bb19c2201b53b (from https://www.piwheels.org/simple/cidc-ngs-pipeline-api/) (requires-python:>=3.6)
2021-11-19T14:30:47,572   Skipping link: No binaries permitted for cidc-ngs-pipeline-api: https://www.piwheels.org/simple/cidc-ngs-pipeline-api/cidc_ngs_pipeline_api-0.1.6-py3-none-any.whl#sha256=ffa8560a756d968034cd35ae15299e3ac31bc0b3f0179dc50f23e7fd7d963a4f (from https://www.piwheels.org/simple/cidc-ngs-pipeline-api/) (requires-python:>=3.6)
2021-11-19T14:30:47,572   Skipping link: No binaries permitted for cidc-ngs-pipeline-api: https://www.piwheels.org/simple/cidc-ngs-pipeline-api/cidc_ngs_pipeline_api-0.1.7-py3-none-any.whl#sha256=9673d25a94b558c2d047aee9ed8f6ad333d14bbf52bc00fc17000fe2ba928c5b (from https://www.piwheels.org/simple/cidc-ngs-pipeline-api/) (requires-python:>=3.6)
2021-11-19T14:30:47,573   Skipping link: No binaries permitted for cidc-ngs-pipeline-api: https://www.piwheels.org/simple/cidc-ngs-pipeline-api/cidc_ngs_pipeline_api-0.1.8-py3-none-any.whl#sha256=f1a1b7a30efd367913cf51384b977187657b938c421bf6f9051902ec2e61a02e (from https://www.piwheels.org/simple/cidc-ngs-pipeline-api/) (requires-python:>=3.6)
2021-11-19T14:30:47,573   Skipping link: No binaries permitted for cidc-ngs-pipeline-api: https://www.piwheels.org/simple/cidc-ngs-pipeline-api/cidc_ngs_pipeline_api-0.1.9-py3-none-any.whl#sha256=1fcbbfe91fe74032d09b845f152724b123a1eb21b16c477162f09888de350f2a (from https://www.piwheels.org/simple/cidc-ngs-pipeline-api/) (requires-python:>=3.6)
2021-11-19T14:30:47,573 Skipping link: not a file: https://www.piwheels.org/simple/cidc-ngs-pipeline-api/
2021-11-19T14:30:47,573 Skipping link: not a file: https://pypi.org/simple/cidc-ngs-pipeline-api/
2021-11-19T14:30:47,591 Given no hashes to check 1 links for project 'cidc-ngs-pipeline-api': discarding no candidates
2021-11-19T14:30:47,605 Collecting cidc-ngs-pipeline-api==0.1.16
2021-11-19T14:30:47,607   Created temporary directory: /tmp/pip-unpack-o7pzl8eh
2021-11-19T14:30:47,944   Downloading cidc_ngs_pipeline_api-0.1.16.tar.gz (2.3 MB)
2021-11-19T14:30:48,368   Added cidc-ngs-pipeline-api==0.1.16 from https://files.pythonhosted.org/packages/a4/34/c1ecf28e2621998c8e2101621a5289aabc67c7ca15dc2113cc85dbdeb308/cidc_ngs_pipeline_api-0.1.16.tar.gz#sha256=8363960c3f084dab60d5dcaf73f3aaa2680ba5ab1168e67c65f377d36d5400a6 to build tracker '/tmp/pip-req-tracker-lmz5ftro'
2021-11-19T14:30:48,369     Running setup.py (path:/tmp/pip-wheel-yc0ifkri/cidc-ngs-pipeline-api_c82665f911354cd58fa4c96ab182e78c/setup.py) egg_info for package cidc-ngs-pipeline-api
2021-11-19T14:30:48,370     Created temporary directory: /tmp/pip-pip-egg-info-2p0f_o_k
2021-11-19T14:30:48,370     Running command python setup.py egg_info
2021-11-19T14:30:49,370     rna
2021-11-19T14:30:49,371     atacseq
2021-11-19T14:30:49,371     wes
2021-11-19T14:30:49,371     wes_tumor_only
2021-11-19T14:30:49,371     running egg_info
2021-11-19T14:30:49,373     creating /tmp/pip-pip-egg-info-2p0f_o_k/cidc_ngs_pipeline_api.egg-info
2021-11-19T14:30:49,374     writing /tmp/pip-pip-egg-info-2p0f_o_k/cidc_ngs_pipeline_api.egg-info/PKG-INFO
2021-11-19T14:30:49,379     writing dependency_links to /tmp/pip-pip-egg-info-2p0f_o_k/cidc_ngs_pipeline_api.egg-info/dependency_links.txt
2021-11-19T14:30:49,381     writing requirements to /tmp/pip-pip-egg-info-2p0f_o_k/cidc_ngs_pipeline_api.egg-info/requires.txt
2021-11-19T14:30:49,382     writing top-level names to /tmp/pip-pip-egg-info-2p0f_o_k/cidc_ngs_pipeline_api.egg-info/top_level.txt
2021-11-19T14:30:49,383     writing manifest file '/tmp/pip-pip-egg-info-2p0f_o_k/cidc_ngs_pipeline_api.egg-info/SOURCES.txt'
2021-11-19T14:30:49,531     reading manifest file '/tmp/pip-pip-egg-info-2p0f_o_k/cidc_ngs_pipeline_api.egg-info/SOURCES.txt'
2021-11-19T14:30:49,533     reading manifest template 'MANIFEST.in'
2021-11-19T14:30:49,541     writing manifest file '/tmp/pip-pip-egg-info-2p0f_o_k/cidc_ngs_pipeline_api.egg-info/SOURCES.txt'
2021-11-19T14:30:49,613   Source in /tmp/pip-wheel-yc0ifkri/cidc-ngs-pipeline-api_c82665f911354cd58fa4c96ab182e78c has version 0.1.16, which satisfies requirement cidc-ngs-pipeline-api==0.1.16 from https://files.pythonhosted.org/packages/a4/34/c1ecf28e2621998c8e2101621a5289aabc67c7ca15dc2113cc85dbdeb308/cidc_ngs_pipeline_api-0.1.16.tar.gz#sha256=8363960c3f084dab60d5dcaf73f3aaa2680ba5ab1168e67c65f377d36d5400a6
2021-11-19T14:30:49,614   Removed cidc-ngs-pipeline-api==0.1.16 from https://files.pythonhosted.org/packages/a4/34/c1ecf28e2621998c8e2101621a5289aabc67c7ca15dc2113cc85dbdeb308/cidc_ngs_pipeline_api-0.1.16.tar.gz#sha256=8363960c3f084dab60d5dcaf73f3aaa2680ba5ab1168e67c65f377d36d5400a6 from build tracker '/tmp/pip-req-tracker-lmz5ftro'
2021-11-19T14:30:49,621 Created temporary directory: /tmp/pip-unpack-8u73zotl
2021-11-19T14:30:49,622 Building wheels for collected packages: cidc-ngs-pipeline-api
2021-11-19T14:30:49,627   Created temporary directory: /tmp/pip-wheel-fq_5v5h2
2021-11-19T14:30:49,627   Building wheel for cidc-ngs-pipeline-api (setup.py): started
2021-11-19T14:30:49,628   Destination directory: /tmp/pip-wheel-fq_5v5h2
2021-11-19T14:30:49,628   Running command /usr/bin/python3 -u -c 'import io, os, sys, setuptools, tokenize; sys.argv[0] = '"'"'/tmp/pip-wheel-yc0ifkri/cidc-ngs-pipeline-api_c82665f911354cd58fa4c96ab182e78c/setup.py'"'"'; __file__='"'"'/tmp/pip-wheel-yc0ifkri/cidc-ngs-pipeline-api_c82665f911354cd58fa4c96ab182e78c/setup.py'"'"';f = getattr(tokenize, '"'"'open'"'"', open)(__file__) if os.path.exists(__file__) else io.StringIO('"'"'from setuptools import setup; setup()'"'"');code = f.read().replace('"'"'\r\n'"'"', '"'"'\n'"'"');f.close();exec(compile(code, __file__, '"'"'exec'"'"'))' bdist_wheel -d /tmp/pip-wheel-fq_5v5h2
2021-11-19T14:30:50,452   rna
2021-11-19T14:30:50,453   atacseq
2021-11-19T14:30:50,455   wes
2021-11-19T14:30:50,455   wes_tumor_only
2021-11-19T14:30:50,629   running bdist_wheel
2021-11-19T14:30:50,634   running build
2021-11-19T14:30:50,635   running build_py
2021-11-19T14:30:50,759   creating build
2021-11-19T14:30:50,759   creating build/lib
2021-11-19T14:30:50,760   creating build/lib/cidc_ngs_pipeline_api
2021-11-19T14:30:50,761   copying cidc_ngs_pipeline_api/__init__.py -> build/lib/cidc_ngs_pipeline_api
2021-11-19T14:30:50,762   running egg_info
2021-11-19T14:30:50,775   writing cidc_ngs_pipeline_api.egg-info/PKG-INFO
2021-11-19T14:30:50,777   writing dependency_links to cidc_ngs_pipeline_api.egg-info/dependency_links.txt
2021-11-19T14:30:50,779   writing requirements to cidc_ngs_pipeline_api.egg-info/requires.txt
2021-11-19T14:30:50,780   writing top-level names to cidc_ngs_pipeline_api.egg-info/top_level.txt
2021-11-19T14:30:50,801   reading manifest file 'cidc_ngs_pipeline_api.egg-info/SOURCES.txt'
2021-11-19T14:30:50,804   reading manifest template 'MANIFEST.in'
2021-11-19T14:30:50,813   writing manifest file 'cidc_ngs_pipeline_api.egg-info/SOURCES.txt'
2021-11-19T14:30:50,817   copying cidc_ngs_pipeline_api/output_API.schema.json -> build/lib/cidc_ngs_pipeline_api
2021-11-19T14:30:50,820   creating build/lib/cidc_ngs_pipeline_api/__pycache__
2021-11-19T14:30:50,821   copying cidc_ngs_pipeline_api/__pycache__/__init__.cpython-37.pyc -> build/lib/cidc_ngs_pipeline_api/__pycache__
2021-11-19T14:30:50,823   creating build/lib/cidc_ngs_pipeline_api/atacseq
2021-11-19T14:30:50,824   copying cidc_ngs_pipeline_api/atacseq/atacseq.md -> build/lib/cidc_ngs_pipeline_api/atacseq
2021-11-19T14:30:50,827   copying cidc_ngs_pipeline_api/atacseq/atacseq_output_API.json -> build/lib/cidc_ngs_pipeline_api/atacseq
2021-11-19T14:30:50,829   creating build/lib/cidc_ngs_pipeline_api/atacseq/imgs
2021-11-19T14:30:50,830   copying cidc_ngs_pipeline_api/atacseq/imgs/atacseq.png -> build/lib/cidc_ngs_pipeline_api/atacseq/imgs
2021-11-19T14:30:50,851   creating build/lib/cidc_ngs_pipeline_api/rna
2021-11-19T14:30:50,852   copying cidc_ngs_pipeline_api/rna/rna.md -> build/lib/cidc_ngs_pipeline_api/rna
2021-11-19T14:30:50,855   copying cidc_ngs_pipeline_api/rna/rna_config.schema.json -> build/lib/cidc_ngs_pipeline_api/rna
2021-11-19T14:30:50,857   copying cidc_ngs_pipeline_api/rna/rna_output_API.json -> build/lib/cidc_ngs_pipeline_api/rna
2021-11-19T14:30:50,860   creating build/lib/cidc_ngs_pipeline_api/rna/imgs
2021-11-19T14:30:50,861   copying cidc_ngs_pipeline_api/rna/imgs/RIMA.png -> build/lib/cidc_ngs_pipeline_api/rna/imgs
2021-11-19T14:30:50,889   creating build/lib/cidc_ngs_pipeline_api/tcr
2021-11-19T14:30:50,890   copying cidc_ngs_pipeline_api/tcr/tcr.md -> build/lib/cidc_ngs_pipeline_api/tcr
2021-11-19T14:30:50,894   creating build/lib/cidc_ngs_pipeline_api/tcr/imgs
2021-11-19T14:30:50,895   copying cidc_ngs_pipeline_api/tcr/imgs/TCRseq.png -> build/lib/cidc_ngs_pipeline_api/tcr/imgs
2021-11-19T14:30:50,903   creating build/lib/cidc_ngs_pipeline_api/wes
2021-11-19T14:30:50,904   copying cidc_ngs_pipeline_api/wes/wes.md -> build/lib/cidc_ngs_pipeline_api/wes
2021-11-19T14:30:50,907   copying cidc_ngs_pipeline_api/wes/wes_config.schema.json -> build/lib/cidc_ngs_pipeline_api/wes
2021-11-19T14:30:50,909   copying cidc_ngs_pipeline_api/wes/wes_output_API.json -> build/lib/cidc_ngs_pipeline_api/wes
2021-11-19T14:30:50,913   copying cidc_ngs_pipeline_api/wes/wes_output_API.py -> build/lib/cidc_ngs_pipeline_api/wes
2021-11-19T14:30:50,917   copying cidc_ngs_pipeline_api/wes/wes_tumor_only_output_API.json -> build/lib/cidc_ngs_pipeline_api/wes
2021-11-19T14:30:50,920   creating build/lib/cidc_ngs_pipeline_api/wes/imgs
2021-11-19T14:30:50,921   copying cidc_ngs_pipeline_api/wes/imgs/wes.png -> build/lib/cidc_ngs_pipeline_api/wes/imgs
2021-11-19T14:30:50,988   installing to build/bdist.linux-armv7l/wheel
2021-11-19T14:30:50,988   running install
2021-11-19T14:30:50,990   running install_lib
2021-11-19T14:30:50,995   creating build/bdist.linux-armv7l
2021-11-19T14:30:50,996   creating build/bdist.linux-armv7l/wheel
2021-11-19T14:30:50,998   creating build/bdist.linux-armv7l/wheel/cidc_ngs_pipeline_api
2021-11-19T14:30:50,999   copying build/lib/cidc_ngs_pipeline_api/__init__.py -> build/bdist.linux-armv7l/wheel/cidc_ngs_pipeline_api
2021-11-19T14:30:51,003   creating build/bdist.linux-armv7l/wheel/cidc_ngs_pipeline_api/rna
2021-11-19T14:30:51,004   copying build/lib/cidc_ngs_pipeline_api/rna/rna_output_API.json -> build/bdist.linux-armv7l/wheel/cidc_ngs_pipeline_api/rna
2021-11-19T14:30:51,008   creating build/bdist.linux-armv7l/wheel/cidc_ngs_pipeline_api/rna/imgs
2021-11-19T14:30:51,009   copying build/lib/cidc_ngs_pipeline_api/rna/imgs/RIMA.png -> build/bdist.linux-armv7l/wheel/cidc_ngs_pipeline_api/rna/imgs
2021-11-19T14:30:51,040   copying build/lib/cidc_ngs_pipeline_api/rna/rna_config.schema.json -> build/bdist.linux-armv7l/wheel/cidc_ngs_pipeline_api/rna
2021-11-19T14:30:51,042   copying build/lib/cidc_ngs_pipeline_api/rna/rna.md -> build/bdist.linux-armv7l/wheel/cidc_ngs_pipeline_api/rna
2021-11-19T14:30:51,045   creating build/bdist.linux-armv7l/wheel/cidc_ngs_pipeline_api/atacseq
2021-11-19T14:30:51,045   copying build/lib/cidc_ngs_pipeline_api/atacseq/atacseq_output_API.json -> build/bdist.linux-armv7l/wheel/cidc_ngs_pipeline_api/atacseq
2021-11-19T14:30:51,048   creating build/bdist.linux-armv7l/wheel/cidc_ngs_pipeline_api/atacseq/imgs
2021-11-19T14:30:51,049   copying build/lib/cidc_ngs_pipeline_api/atacseq/imgs/atacseq.png -> build/bdist.linux-armv7l/wheel/cidc_ngs_pipeline_api/atacseq/imgs
2021-11-19T14:30:51,067   copying build/lib/cidc_ngs_pipeline_api/atacseq/atacseq.md -> build/bdist.linux-armv7l/wheel/cidc_ngs_pipeline_api/atacseq
2021-11-19T14:30:51,070   creating build/bdist.linux-armv7l/wheel/cidc_ngs_pipeline_api/tcr
2021-11-19T14:30:51,070   copying build/lib/cidc_ngs_pipeline_api/tcr/tcr.md -> build/bdist.linux-armv7l/wheel/cidc_ngs_pipeline_api/tcr
2021-11-19T14:30:51,073   creating build/bdist.linux-armv7l/wheel/cidc_ngs_pipeline_api/tcr/imgs
2021-11-19T14:30:51,074   copying build/lib/cidc_ngs_pipeline_api/tcr/imgs/TCRseq.png -> build/bdist.linux-armv7l/wheel/cidc_ngs_pipeline_api/tcr/imgs
2021-11-19T14:30:51,082   creating build/bdist.linux-armv7l/wheel/cidc_ngs_pipeline_api/__pycache__
2021-11-19T14:30:51,083   copying build/lib/cidc_ngs_pipeline_api/__pycache__/__init__.cpython-37.pyc -> build/bdist.linux-armv7l/wheel/cidc_ngs_pipeline_api/__pycache__
2021-11-19T14:30:51,086   creating build/bdist.linux-armv7l/wheel/cidc_ngs_pipeline_api/wes
2021-11-19T14:30:51,087   copying build/lib/cidc_ngs_pipeline_api/wes/wes.md -> build/bdist.linux-armv7l/wheel/cidc_ngs_pipeline_api/wes
2021-11-19T14:30:51,089   copying build/lib/cidc_ngs_pipeline_api/wes/wes_output_API.json -> build/bdist.linux-armv7l/wheel/cidc_ngs_pipeline_api/wes
2021-11-19T14:30:51,092   copying build/lib/cidc_ngs_pipeline_api/wes/wes_output_API.py -> build/bdist.linux-armv7l/wheel/cidc_ngs_pipeline_api/wes
2021-11-19T14:30:51,095   copying build/lib/cidc_ngs_pipeline_api/wes/wes_tumor_only_output_API.json -> build/bdist.linux-armv7l/wheel/cidc_ngs_pipeline_api/wes
2021-11-19T14:30:51,099   creating build/bdist.linux-armv7l/wheel/cidc_ngs_pipeline_api/wes/imgs
2021-11-19T14:30:51,100   copying build/lib/cidc_ngs_pipeline_api/wes/imgs/wes.png -> build/bdist.linux-armv7l/wheel/cidc_ngs_pipeline_api/wes/imgs
2021-11-19T14:30:51,113   copying build/lib/cidc_ngs_pipeline_api/wes/wes_config.schema.json -> build/bdist.linux-armv7l/wheel/cidc_ngs_pipeline_api/wes
2021-11-19T14:30:51,115   copying build/lib/cidc_ngs_pipeline_api/output_API.schema.json -> build/bdist.linux-armv7l/wheel/cidc_ngs_pipeline_api
2021-11-19T14:30:51,117   running install_egg_info
2021-11-19T14:30:51,128   Copying cidc_ngs_pipeline_api.egg-info to build/bdist.linux-armv7l/wheel/cidc_ngs_pipeline_api-0.1.16-py3.7.egg-info
2021-11-19T14:30:51,142   running install_scripts
2021-11-19T14:30:51,215   creating build/bdist.linux-armv7l/wheel/cidc_ngs_pipeline_api-0.1.16.dist-info/WHEEL
2021-11-19T14:30:51,217   creating '/tmp/pip-wheel-fq_5v5h2/cidc_ngs_pipeline_api-0.1.16-py3-none-any.whl' and adding 'build/bdist.linux-armv7l/wheel' to it
2021-11-19T14:30:51,220   adding 'cidc_ngs_pipeline_api/__init__.py'
2021-11-19T14:30:51,221   adding 'cidc_ngs_pipeline_api/output_API.schema.json'
2021-11-19T14:30:51,223   adding 'cidc_ngs_pipeline_api/__pycache__/__init__.cpython-37.pyc'
2021-11-19T14:30:51,225   adding 'cidc_ngs_pipeline_api/atacseq/atacseq.md'
2021-11-19T14:30:51,227   adding 'cidc_ngs_pipeline_api/atacseq/atacseq_output_API.json'
2021-11-19T14:30:51,317   adding 'cidc_ngs_pipeline_api/atacseq/imgs/atacseq.png'
2021-11-19T14:30:51,325   adding 'cidc_ngs_pipeline_api/rna/rna.md'
2021-11-19T14:30:51,326   adding 'cidc_ngs_pipeline_api/rna/rna_config.schema.json'
2021-11-19T14:30:51,327   adding 'cidc_ngs_pipeline_api/rna/rna_output_API.json'
2021-11-19T14:30:51,463   adding 'cidc_ngs_pipeline_api/rna/imgs/RIMA.png'
2021-11-19T14:30:51,474   adding 'cidc_ngs_pipeline_api/tcr/tcr.md'
2021-11-19T14:30:51,495   adding 'cidc_ngs_pipeline_api/tcr/imgs/TCRseq.png'
2021-11-19T14:30:51,498   adding 'cidc_ngs_pipeline_api/wes/wes.md'
2021-11-19T14:30:51,500   adding 'cidc_ngs_pipeline_api/wes/wes_config.schema.json'
2021-11-19T14:30:51,502   adding 'cidc_ngs_pipeline_api/wes/wes_output_API.json'
2021-11-19T14:30:51,504   adding 'cidc_ngs_pipeline_api/wes/wes_output_API.py'
2021-11-19T14:30:51,506   adding 'cidc_ngs_pipeline_api/wes/wes_tumor_only_output_API.json'
2021-11-19T14:30:51,557   adding 'cidc_ngs_pipeline_api/wes/imgs/wes.png'
2021-11-19T14:30:51,562   adding 'cidc_ngs_pipeline_api-0.1.16.dist-info/METADATA'
2021-11-19T14:30:51,563   adding 'cidc_ngs_pipeline_api-0.1.16.dist-info/WHEEL'
2021-11-19T14:30:51,564   adding 'cidc_ngs_pipeline_api-0.1.16.dist-info/top_level.txt'
2021-11-19T14:30:51,565   adding 'cidc_ngs_pipeline_api-0.1.16.dist-info/RECORD'
2021-11-19T14:30:51,602   removing build/bdist.linux-armv7l/wheel
2021-11-19T14:30:51,687   Building wheel for cidc-ngs-pipeline-api (setup.py): finished with status 'done'
2021-11-19T14:30:51,723   Created wheel for cidc-ngs-pipeline-api: filename=cidc_ngs_pipeline_api-0.1.16-py3-none-any.whl size=2340166 sha256=51379048ceecf75fb45c73c6de3f6fb7dee1c21d6d0ba6583bd47cd43921b0de
2021-11-19T14:30:51,723   Stored in directory: /tmp/pip-ephem-wheel-cache-bz_tw17c/wheels/be/84/dc/440eae47bcbf12a386cccc2c55d8b09d3d04f5ddccd68ace31
2021-11-19T14:30:51,733 Successfully built cidc-ngs-pipeline-api
2021-11-19T14:30:51,817 Removed build tracker: '/tmp/pip-req-tracker-lmz5ftro'