2021-11-19T15:13:31,166 Created temporary directory: /tmp/pip-ephem-wheel-cache-iv8wqniu 2021-11-19T15:13:31,173 Created temporary directory: /tmp/pip-req-tracker-6nzad5b7 2021-11-19T15:13:31,174 Initialized build tracking at /tmp/pip-req-tracker-6nzad5b7 2021-11-19T15:13:31,174 Created build tracker: /tmp/pip-req-tracker-6nzad5b7 2021-11-19T15:13:31,174 Entered build tracker: /tmp/pip-req-tracker-6nzad5b7 2021-11-19T15:13:31,176 Created temporary directory: /tmp/pip-wheel-25ynichu 2021-11-19T15:13:31,236 Looking in indexes: https://pypi.org/simple, https://www.piwheels.org/simple 2021-11-19T15:13:31,240 2 location(s) to search for versions of redlionfish: 2021-11-19T15:13:31,240 * https://pypi.org/simple/redlionfish/ 2021-11-19T15:13:31,240 * https://www.piwheels.org/simple/redlionfish/ 2021-11-19T15:13:31,241 Fetching project page and analyzing links: https://pypi.org/simple/redlionfish/ 2021-11-19T15:13:31,243 Getting page https://pypi.org/simple/redlionfish/ 2021-11-19T15:13:31,247 Found index url https://pypi.org/simple 2021-11-19T15:13:31,476 Found link https://files.pythonhosted.org/packages/e2/80/6e9fb6768c2d95a6f00a8b1622a41d2a832129aa39525275a72944b275c2/RedLionfish-0.4.tar.gz#sha256=4526183cf061b27c4d5032d3473b4a65880971c6624f2c899d41e7d6bc858aa0 (from https://pypi.org/simple/redlionfish/), version: 0.4 2021-11-19T15:13:31,477 Fetching project page and analyzing links: https://www.piwheels.org/simple/redlionfish/ 2021-11-19T15:13:31,478 Getting page https://www.piwheels.org/simple/redlionfish/ 2021-11-19T15:13:31,480 Found index url https://www.piwheels.org/simple 2021-11-19T15:13:31,749 Given no hashes to check 1 links for project 'redlionfish': discarding no candidates 2021-11-19T15:13:31,782 Collecting redlionfish==0.4 2021-11-19T15:13:31,786 Created temporary directory: /tmp/pip-unpack-ez2z4qud 2021-11-19T15:13:31,870 Downloading RedLionfish-0.4.tar.gz (19 kB) 2021-11-19T15:13:32,019 Added redlionfish==0.4 from https://files.pythonhosted.org/packages/e2/80/6e9fb6768c2d95a6f00a8b1622a41d2a832129aa39525275a72944b275c2/RedLionfish-0.4.tar.gz#sha256=4526183cf061b27c4d5032d3473b4a65880971c6624f2c899d41e7d6bc858aa0 to build tracker '/tmp/pip-req-tracker-6nzad5b7' 2021-11-19T15:13:32,021 Running setup.py (path:/tmp/pip-wheel-25ynichu/redlionfish_456448df139e463fa8a7749c8f93d1bc/setup.py) egg_info for package redlionfish 2021-11-19T15:13:32,023 Created temporary directory: /tmp/pip-pip-egg-info-7timqwqf 2021-11-19T15:13:32,023 Running command python setup.py egg_info 2021-11-19T15:13:34,062 Note this software can use GPU accelation using PyOpenCL and Reikna. 2021-11-19T15:13:34,063 Please install these packages seperately. 2021-11-19T15:13:34,064 The PyOpenCL package available through pip may not install correctly and/or provide access to GPU. 2021-11-19T15:13:34,064 The best way to install PyOpenCL+Reikna in a python environment is by using anaconda/conda envirnonments. 2021-11-19T15:13:34,065 See more information here: https://documen.tician.de/pyopencl/misc.html 2021-11-19T15:13:34,066 If PyOpenCL+Reikna packages are not available, RedLionfish can still run but it will use CPU backend of scipy FFT routines, which can be slow. 2021-11-19T15:13:34,106 running egg_info 2021-11-19T15:13:34,113 creating /tmp/pip-pip-egg-info-7timqwqf/RedLionfish.egg-info 2021-11-19T15:13:34,115 writing entry points to /tmp/pip-pip-egg-info-7timqwqf/RedLionfish.egg-info/entry_points.txt 2021-11-19T15:13:34,117 writing /tmp/pip-pip-egg-info-7timqwqf/RedLionfish.egg-info/PKG-INFO 2021-11-19T15:13:34,123 writing requirements to /tmp/pip-pip-egg-info-7timqwqf/RedLionfish.egg-info/requires.txt 2021-11-19T15:13:34,125 writing dependency_links to /tmp/pip-pip-egg-info-7timqwqf/RedLionfish.egg-info/dependency_links.txt 2021-11-19T15:13:34,127 writing top-level names to /tmp/pip-pip-egg-info-7timqwqf/RedLionfish.egg-info/top_level.txt 2021-11-19T15:13:34,132 writing manifest file '/tmp/pip-pip-egg-info-7timqwqf/RedLionfish.egg-info/SOURCES.txt' 2021-11-19T15:13:34,493 reading manifest file '/tmp/pip-pip-egg-info-7timqwqf/RedLionfish.egg-info/SOURCES.txt' 2021-11-19T15:13:34,502 writing manifest file '/tmp/pip-pip-egg-info-7timqwqf/RedLionfish.egg-info/SOURCES.txt' 2021-11-19T15:13:34,636 Source in /tmp/pip-wheel-25ynichu/redlionfish_456448df139e463fa8a7749c8f93d1bc has version 0.4, which satisfies requirement redlionfish==0.4 from https://files.pythonhosted.org/packages/e2/80/6e9fb6768c2d95a6f00a8b1622a41d2a832129aa39525275a72944b275c2/RedLionfish-0.4.tar.gz#sha256=4526183cf061b27c4d5032d3473b4a65880971c6624f2c899d41e7d6bc858aa0 2021-11-19T15:13:34,637 Removed redlionfish==0.4 from https://files.pythonhosted.org/packages/e2/80/6e9fb6768c2d95a6f00a8b1622a41d2a832129aa39525275a72944b275c2/RedLionfish-0.4.tar.gz#sha256=4526183cf061b27c4d5032d3473b4a65880971c6624f2c899d41e7d6bc858aa0 from build tracker '/tmp/pip-req-tracker-6nzad5b7' 2021-11-19T15:13:34,649 Created temporary directory: /tmp/pip-unpack-_13roipc 2021-11-19T15:13:34,650 Building wheels for collected packages: redlionfish 2021-11-19T15:13:34,663 Created temporary directory: /tmp/pip-wheel-_6aanj28 2021-11-19T15:13:34,664 Building wheel for redlionfish (setup.py): started 2021-11-19T15:13:34,665 Destination directory: /tmp/pip-wheel-_6aanj28 2021-11-19T15:13:34,665 Running command /usr/bin/python3 -u -c 'import sys, setuptools, tokenize; sys.argv[0] = '"'"'/tmp/pip-wheel-25ynichu/redlionfish_456448df139e463fa8a7749c8f93d1bc/setup.py'"'"'; __file__='"'"'/tmp/pip-wheel-25ynichu/redlionfish_456448df139e463fa8a7749c8f93d1bc/setup.py'"'"';f=getattr(tokenize, '"'"'open'"'"', open)(__file__);code=f.read().replace('"'"'\r\n'"'"', '"'"'\n'"'"');f.close();exec(compile(code, __file__, '"'"'exec'"'"'))' bdist_wheel -d /tmp/pip-wheel-_6aanj28 2021-11-19T15:13:36,316 Note this software can use GPU accelation using PyOpenCL and Reikna. 2021-11-19T15:13:36,317 Please install these packages seperately. 2021-11-19T15:13:36,318 The PyOpenCL package available through pip may not install correctly and/or provide access to GPU. 2021-11-19T15:13:36,319 The best way to install PyOpenCL+Reikna in a python environment is by using anaconda/conda envirnonments. 2021-11-19T15:13:36,319 See more information here: https://documen.tician.de/pyopencl/misc.html 2021-11-19T15:13:36,320 If PyOpenCL+Reikna packages are not available, RedLionfish can still run but it will use CPU backend of scipy FFT routines, which can be slow. 2021-11-19T15:13:36,709 running bdist_wheel 2021-11-19T15:13:36,724 running build 2021-11-19T15:13:36,725 running build_py 2021-11-19T15:13:37,061 creating build 2021-11-19T15:13:37,062 creating build/lib 2021-11-19T15:13:37,064 creating build/lib/RedLionfishDeconv 2021-11-19T15:13:37,066 copying RedLionfishDeconv/RLDeconvolve.py -> build/lib/RedLionfishDeconv 2021-11-19T15:13:37,071 copying RedLionfishDeconv/helperfunctions.py -> build/lib/RedLionfishDeconv 2021-11-19T15:13:37,075 copying RedLionfishDeconv/napari_plugin.py -> build/lib/RedLionfishDeconv 2021-11-19T15:13:37,079 copying RedLionfishDeconv/__init__.py -> build/lib/RedLionfishDeconv 2021-11-19T15:13:37,083 copying RedLionfishDeconv/RLDeconv3DReiknaOCL.py -> build/lib/RedLionfishDeconv 2021-11-19T15:13:37,088 copying RedLionfishDeconv/RLDeconv3DScipy.py -> build/lib/RedLionfishDeconv 2021-11-19T15:13:37,107 installing to build/bdist.linux-armv7l/wheel 2021-11-19T15:13:37,109 running install 2021-11-19T15:13:37,112 running install_lib 2021-11-19T15:13:37,121 creating build/bdist.linux-armv7l 2021-11-19T15:13:37,121 creating build/bdist.linux-armv7l/wheel 2021-11-19T15:13:37,125 creating build/bdist.linux-armv7l/wheel/RedLionfishDeconv 2021-11-19T15:13:37,127 copying build/lib/RedLionfishDeconv/RLDeconvolve.py -> build/bdist.linux-armv7l/wheel/RedLionfishDeconv 2021-11-19T15:13:37,132 copying build/lib/RedLionfishDeconv/helperfunctions.py -> build/bdist.linux-armv7l/wheel/RedLionfishDeconv 2021-11-19T15:13:37,137 copying build/lib/RedLionfishDeconv/napari_plugin.py -> build/bdist.linux-armv7l/wheel/RedLionfishDeconv 2021-11-19T15:13:37,141 copying build/lib/RedLionfishDeconv/__init__.py -> build/bdist.linux-armv7l/wheel/RedLionfishDeconv 2021-11-19T15:13:37,144 copying build/lib/RedLionfishDeconv/RLDeconv3DReiknaOCL.py -> build/bdist.linux-armv7l/wheel/RedLionfishDeconv 2021-11-19T15:13:37,151 copying build/lib/RedLionfishDeconv/RLDeconv3DScipy.py -> build/bdist.linux-armv7l/wheel/RedLionfishDeconv 2021-11-19T15:13:37,155 running install_egg_info 2021-11-19T15:13:37,210 running egg_info 2021-11-19T15:13:37,211 writing RedLionfish.egg-info/PKG-INFO 2021-11-19T15:13:37,215 writing dependency_links to RedLionfish.egg-info/dependency_links.txt 2021-11-19T15:13:37,217 writing requirements to RedLionfish.egg-info/requires.txt 2021-11-19T15:13:37,220 writing top-level names to RedLionfish.egg-info/top_level.txt 2021-11-19T15:13:37,222 writing entry points to RedLionfish.egg-info/entry_points.txt 2021-11-19T15:13:37,234 reading manifest file 'RedLionfish.egg-info/SOURCES.txt' 2021-11-19T15:13:37,244 writing manifest file 'RedLionfish.egg-info/SOURCES.txt' 2021-11-19T15:13:37,247 Copying RedLionfish.egg-info to build/bdist.linux-armv7l/wheel/RedLionfish-0.4-py3.5.egg-info 2021-11-19T15:13:37,280 running install_scripts 2021-11-19T15:13:37,474 creating build/bdist.linux-armv7l/wheel/RedLionfish-0.4.dist-info/WHEEL 2021-11-19T15:13:37,689 Building wheel for redlionfish (setup.py): finished with status 'done' 2021-11-19T15:13:37,693 Created wheel for redlionfish: filename=RedLionfish-0.4-py3-none-any.whl size=14757 sha256=18ed47a0a09524f391d6ffd705939d816086ec9d8a4423bb7e0b4974718365c7 2021-11-19T15:13:37,694 Stored in directory: /tmp/pip-ephem-wheel-cache-iv8wqniu/wheels/db/3e/13/75617e94da6c144503018aa2884c139c84be55cd6ceeb86c9d 2021-11-19T15:13:37,720 Successfully built redlionfish 2021-11-19T15:13:37,729 Removed build tracker: '/tmp/pip-req-tracker-6nzad5b7'