2021-11-20T08:00:23,660 Created temporary directory: /tmp/pip-ephem-wheel-cache-g8vzqswy 2021-11-20T08:00:23,666 Created temporary directory: /tmp/pip-req-tracker-smt1lfvq 2021-11-20T08:00:23,667 Initialized build tracking at /tmp/pip-req-tracker-smt1lfvq 2021-11-20T08:00:23,667 Created build tracker: /tmp/pip-req-tracker-smt1lfvq 2021-11-20T08:00:23,668 Entered build tracker: /tmp/pip-req-tracker-smt1lfvq 2021-11-20T08:00:23,669 Created temporary directory: /tmp/pip-wheel-e_jo7bey 2021-11-20T08:00:23,734 Looking in indexes: https://pypi.org/simple, https://www.piwheels.org/simple 2021-11-20T08:00:23,737 2 location(s) to search for versions of glh-test: 2021-11-20T08:00:23,737 * https://pypi.org/simple/glh-test/ 2021-11-20T08:00:23,737 * https://www.piwheels.org/simple/glh-test/ 2021-11-20T08:00:23,738 Fetching project page and analyzing links: https://pypi.org/simple/glh-test/ 2021-11-20T08:00:23,740 Getting page https://pypi.org/simple/glh-test/ 2021-11-20T08:00:23,745 Found index url https://pypi.org/simple 2021-11-20T08:00:24,063 Found link https://files.pythonhosted.org/packages/34/db/e8874421e53d632416db96ab63640ae2fcae6f61b0b8776fb537bd564fcd/glh-test-0.0.1.tar.gz#sha256=f9473bff0f208cc32834b783573b6cff81d777f1e9b153e62d73f80a569c3cbf (from https://pypi.org/simple/glh-test/), version: 0.0.1 2021-11-20T08:00:24,064 Found link https://files.pythonhosted.org/packages/3d/80/d03df5193f9bd047ba039ea11ef9834b55fa09e2c845fac54e4077f07b0e/glh-test-0.0.2.tar.gz#sha256=31018d431b5db6e6d832b2b308076af2dbcc2c2448dae896efcef43f41341c7d (from https://pypi.org/simple/glh-test/), version: 0.0.2 2021-11-20T08:00:24,065 Fetching project page and analyzing links: https://www.piwheels.org/simple/glh-test/ 2021-11-20T08:00:24,065 Getting page https://www.piwheels.org/simple/glh-test/ 2021-11-20T08:00:24,068 Found index url https://www.piwheels.org/simple 2021-11-20T08:00:24,284 Skipping link: No binaries permitted for glh-test: https://www.piwheels.org/simple/glh-test/glh_test-0.0.1-py3-none-any.whl#sha256=129f79f0ed2f1632c8244990b70c531717ab0d11977d90b7b88d64b2ea3bfa19 (from https://www.piwheels.org/simple/glh-test/) 2021-11-20T08:00:24,315 Given no hashes to check 1 links for project 'glh-test': discarding no candidates 2021-11-20T08:00:24,346 Collecting glh-test==0.0.2 2021-11-20T08:00:24,350 Created temporary directory: /tmp/pip-unpack-xw62giut 2021-11-20T08:00:24,789 Downloading glh-test-0.0.2.tar.gz (8.0 MB) 2021-11-20T08:00:31,608 Added glh-test==0.0.2 from https://files.pythonhosted.org/packages/3d/80/d03df5193f9bd047ba039ea11ef9834b55fa09e2c845fac54e4077f07b0e/glh-test-0.0.2.tar.gz#sha256=31018d431b5db6e6d832b2b308076af2dbcc2c2448dae896efcef43f41341c7d to build tracker '/tmp/pip-req-tracker-smt1lfvq' 2021-11-20T08:00:31,612 Running setup.py (path:/tmp/pip-wheel-e_jo7bey/glh-test_2f7c5453e31548ff9330216c9ec9fca2/setup.py) egg_info for package glh-test 2021-11-20T08:00:31,614 Created temporary directory: /tmp/pip-pip-egg-info-8z1fnv8_ 2021-11-20T08:00:31,616 Running command python setup.py egg_info 2021-11-20T08:00:33,501 /usr/bin 2021-11-20T08:00:33,545 running egg_info 2021-11-20T08:00:33,551 creating /tmp/pip-pip-egg-info-8z1fnv8_/glh_test.egg-info 2021-11-20T08:00:33,554 writing dependency_links to /tmp/pip-pip-egg-info-8z1fnv8_/glh_test.egg-info/dependency_links.txt 2021-11-20T08:00:33,557 writing /tmp/pip-pip-egg-info-8z1fnv8_/glh_test.egg-info/PKG-INFO 2021-11-20T08:00:33,562 writing requirements to /tmp/pip-pip-egg-info-8z1fnv8_/glh_test.egg-info/requires.txt 2021-11-20T08:00:33,564 writing top-level names to /tmp/pip-pip-egg-info-8z1fnv8_/glh_test.egg-info/top_level.txt 2021-11-20T08:00:33,569 writing manifest file '/tmp/pip-pip-egg-info-8z1fnv8_/glh_test.egg-info/SOURCES.txt' 2021-11-20T08:00:33,959 reading manifest file '/tmp/pip-pip-egg-info-8z1fnv8_/glh_test.egg-info/SOURCES.txt' 2021-11-20T08:00:33,968 writing manifest file '/tmp/pip-pip-egg-info-8z1fnv8_/glh_test.egg-info/SOURCES.txt' 2021-11-20T08:00:34,104 Source in /tmp/pip-wheel-e_jo7bey/glh-test_2f7c5453e31548ff9330216c9ec9fca2 has version 0.0.2, which satisfies requirement glh-test==0.0.2 from https://files.pythonhosted.org/packages/3d/80/d03df5193f9bd047ba039ea11ef9834b55fa09e2c845fac54e4077f07b0e/glh-test-0.0.2.tar.gz#sha256=31018d431b5db6e6d832b2b308076af2dbcc2c2448dae896efcef43f41341c7d 2021-11-20T08:00:34,106 Removed glh-test==0.0.2 from https://files.pythonhosted.org/packages/3d/80/d03df5193f9bd047ba039ea11ef9834b55fa09e2c845fac54e4077f07b0e/glh-test-0.0.2.tar.gz#sha256=31018d431b5db6e6d832b2b308076af2dbcc2c2448dae896efcef43f41341c7d from build tracker '/tmp/pip-req-tracker-smt1lfvq' 2021-11-20T08:00:34,117 Created temporary directory: /tmp/pip-unpack-ti6d141x 2021-11-20T08:00:34,118 Building wheels for collected packages: glh-test 2021-11-20T08:00:34,127 Created temporary directory: /tmp/pip-wheel-yrmvqx81 2021-11-20T08:00:34,128 Building wheel for glh-test (setup.py): started 2021-11-20T08:00:34,128 Destination directory: /tmp/pip-wheel-yrmvqx81 2021-11-20T08:00:34,129 Running command /usr/bin/python3 -u -c 'import sys, setuptools, tokenize; sys.argv[0] = '"'"'/tmp/pip-wheel-e_jo7bey/glh-test_2f7c5453e31548ff9330216c9ec9fca2/setup.py'"'"'; __file__='"'"'/tmp/pip-wheel-e_jo7bey/glh-test_2f7c5453e31548ff9330216c9ec9fca2/setup.py'"'"';f=getattr(tokenize, '"'"'open'"'"', open)(__file__);code=f.read().replace('"'"'\r\n'"'"', '"'"'\n'"'"');f.close();exec(compile(code, __file__, '"'"'exec'"'"'))' bdist_wheel -d /tmp/pip-wheel-yrmvqx81 2021-11-20T08:00:35,642 /usr/bin 2021-11-20T08:00:36,051 running bdist_wheel 2021-11-20T08:00:36,065 running build 2021-11-20T08:00:36,066 running build_py 2021-11-20T08:00:36,405 creating build 2021-11-20T08:00:36,405 creating build/lib 2021-11-20T08:00:36,407 creating build/lib/src 2021-11-20T08:00:36,409 copying src/splicing.py -> build/lib/src 2021-11-20T08:00:36,415 copying src/ase.py -> build/lib/src 2021-11-20T08:00:36,421 copying src/expression.py -> build/lib/src 2021-11-20T08:00:36,426 copying src/__init__.py -> build/lib/src 2021-11-20T08:00:36,430 creating build/lib/ext 2021-11-20T08:00:36,432 copying ext/__init__.py -> build/lib/ext 2021-11-20T08:00:36,438 creating build/lib/ext/callOutliers 2021-11-20T08:00:36,440 copying ext/callOutliers/gtf2bed12.py -> build/lib/ext/callOutliers 2021-11-20T08:00:36,447 copying ext/callOutliers/collapse_annotation.py -> build/lib/ext/callOutliers 2021-11-20T08:00:36,454 copying ext/callOutliers/zscore_outliersFinder.py -> build/lib/ext/callOutliers 2021-11-20T08:00:36,458 copying ext/callOutliers/__init__.py -> build/lib/ext/callOutliers 2021-11-20T08:00:36,461 copying ext/callOutliers/anevadot.py -> build/lib/ext/callOutliers 2021-11-20T08:00:36,465 copying ext/callOutliers/resemble_outliersFinder.py -> build/lib/ext/callOutliers 2021-11-20T08:00:36,477 copying ext/peertool -> build/lib/ext 2021-11-20T08:00:38,684 copying ext/rnaseqc -> build/lib/ext 2021-11-20T08:00:39,622 creating build/lib/ext/phaser 2021-11-20T08:00:39,624 copying ext/phaser/call_read_variant_map.py -> build/lib/ext/phaser 2021-11-20T08:00:39,629 copying ext/phaser/phaser_gene_ae.py -> build/lib/ext/phaser 2021-11-20T08:00:39,636 copying ext/phaser/phaser_annotate.py -> build/lib/ext/phaser 2021-11-20T08:00:39,645 copying ext/phaser/phaser.py -> build/lib/ext/phaser 2021-11-20T08:00:39,663 copying ext/phaser/read_variant_map.py -> build/lib/ext/phaser 2021-11-20T08:00:39,671 creating build/lib/ext/SPOT 2021-11-20T08:00:39,673 copying ext/SPOT/dirichlet_multinomial.stan -> build/lib/ext/SPOT 2021-11-20T08:00:39,681 copying ext/SPOT/spot.py -> build/lib/ext/SPOT 2021-11-20T08:00:39,689 copying ext/SPOT/dirichlet_multinomial.py -> build/lib/ext/SPOT 2021-11-20T08:00:39,696 creating build/lib/ext/leafcutter 2021-11-20T08:00:39,699 copying ext/leafcutter/bed2junc.pl -> build/lib/ext/leafcutter 2021-11-20T08:00:39,706 copying ext/leafcutter/filter_cs.py -> build/lib/ext/leafcutter 2021-11-20T08:00:39,712 copying ext/leafcutter/sam2bed.pl -> build/lib/ext/leafcutter 2021-11-20T08:00:39,720 copying ext/leafcutter/leafcutter_cluster.py -> build/lib/ext/leafcutter 2021-11-20T08:00:39,729 copying ext/leafcutter/get_cluster_gene.py -> build/lib/ext/leafcutter 2021-11-20T08:00:39,735 copying ext/leafcutter/bam2junc.sh -> build/lib/ext/leafcutter 2021-11-20T08:00:39,747 running build_scripts 2021-11-20T08:00:39,748 creating build/scripts-3.5 2021-11-20T08:00:39,752 copying and adjusting moder.py -> build/scripts-3.5 2021-11-20T08:00:39,760 changing mode of build/scripts-3.5/moder.py from 644 to 755 2021-11-20T08:00:39,766 installing to build/bdist.linux-armv7l/wheel 2021-11-20T08:00:39,767 running install 2021-11-20T08:00:39,769 running install_lib 2021-11-20T08:00:39,777 creating build/bdist.linux-armv7l 2021-11-20T08:00:39,777 creating build/bdist.linux-armv7l/wheel 2021-11-20T08:00:39,781 creating build/bdist.linux-armv7l/wheel/ext 2021-11-20T08:00:39,783 copying build/lib/ext/peertool -> build/bdist.linux-armv7l/wheel/ext 2021-11-20T08:00:41,990 creating build/bdist.linux-armv7l/wheel/ext/callOutliers 2021-11-20T08:00:41,992 copying build/lib/ext/callOutliers/gtf2bed12.py -> build/bdist.linux-armv7l/wheel/ext/callOutliers 2021-11-20T08:00:42,001 copying build/lib/ext/callOutliers/collapse_annotation.py -> build/bdist.linux-armv7l/wheel/ext/callOutliers 2021-11-20T08:00:42,008 copying build/lib/ext/callOutliers/zscore_outliersFinder.py -> build/bdist.linux-armv7l/wheel/ext/callOutliers 2021-11-20T08:00:42,013 copying build/lib/ext/callOutliers/__init__.py -> build/bdist.linux-armv7l/wheel/ext/callOutliers 2021-11-20T08:00:42,018 copying build/lib/ext/callOutliers/anevadot.py -> build/bdist.linux-armv7l/wheel/ext/callOutliers 2021-11-20T08:00:42,024 copying build/lib/ext/callOutliers/resemble_outliersFinder.py -> build/bdist.linux-armv7l/wheel/ext/callOutliers 2021-11-20T08:00:42,032 creating build/bdist.linux-armv7l/wheel/ext/phaser 2021-11-20T08:00:42,034 copying build/lib/ext/phaser/call_read_variant_map.py -> build/bdist.linux-armv7l/wheel/ext/phaser 2021-11-20T08:00:42,040 copying build/lib/ext/phaser/phaser_gene_ae.py -> build/bdist.linux-armv7l/wheel/ext/phaser 2021-11-20T08:00:42,047 copying build/lib/ext/phaser/phaser_annotate.py -> build/bdist.linux-armv7l/wheel/ext/phaser 2021-11-20T08:00:42,054 copying build/lib/ext/phaser/phaser.py -> build/bdist.linux-armv7l/wheel/ext/phaser 2021-11-20T08:00:42,071 copying build/lib/ext/phaser/read_variant_map.py -> build/bdist.linux-armv7l/wheel/ext/phaser 2021-11-20T08:00:42,079 creating build/bdist.linux-armv7l/wheel/ext/SPOT 2021-11-20T08:00:42,082 copying build/lib/ext/SPOT/dirichlet_multinomial.stan -> build/bdist.linux-armv7l/wheel/ext/SPOT 2021-11-20T08:00:42,088 copying build/lib/ext/SPOT/spot.py -> build/bdist.linux-armv7l/wheel/ext/SPOT 2021-11-20T08:00:42,094 copying build/lib/ext/SPOT/dirichlet_multinomial.py -> build/bdist.linux-armv7l/wheel/ext/SPOT 2021-11-20T08:00:42,102 creating build/bdist.linux-armv7l/wheel/ext/leafcutter 2021-11-20T08:00:42,105 copying build/lib/ext/leafcutter/bed2junc.pl -> build/bdist.linux-armv7l/wheel/ext/leafcutter 2021-11-20T08:00:42,110 copying build/lib/ext/leafcutter/filter_cs.py -> build/bdist.linux-armv7l/wheel/ext/leafcutter 2021-11-20T08:00:42,116 copying build/lib/ext/leafcutter/sam2bed.pl -> build/bdist.linux-armv7l/wheel/ext/leafcutter 2021-11-20T08:00:42,122 copying build/lib/ext/leafcutter/leafcutter_cluster.py -> build/bdist.linux-armv7l/wheel/ext/leafcutter 2021-11-20T08:00:42,129 copying build/lib/ext/leafcutter/get_cluster_gene.py -> build/bdist.linux-armv7l/wheel/ext/leafcutter 2021-11-20T08:00:42,135 copying build/lib/ext/leafcutter/bam2junc.sh -> build/bdist.linux-armv7l/wheel/ext/leafcutter 2021-11-20T08:00:42,140 copying build/lib/ext/rnaseqc -> build/bdist.linux-armv7l/wheel/ext 2021-11-20T08:00:43,083 copying build/lib/ext/__init__.py -> build/bdist.linux-armv7l/wheel/ext 2021-11-20T08:00:43,087 creating build/bdist.linux-armv7l/wheel/src 2021-11-20T08:00:43,090 copying build/lib/src/splicing.py -> build/bdist.linux-armv7l/wheel/src 2021-11-20T08:00:43,098 copying build/lib/src/ase.py -> build/bdist.linux-armv7l/wheel/src 2021-11-20T08:00:43,105 copying build/lib/src/expression.py -> build/bdist.linux-armv7l/wheel/src 2021-11-20T08:00:43,113 copying build/lib/src/__init__.py -> build/bdist.linux-armv7l/wheel/src 2021-11-20T08:00:43,116 running install_data 2021-11-20T08:00:43,124 creating build/bdist.linux-armv7l/wheel/glh_test-0.0.2.data 2021-11-20T08:00:43,125 creating build/bdist.linux-armv7l/wheel/glh_test-0.0.2.data/data 2021-11-20T08:00:43,128 creating build/bdist.linux-armv7l/wheel/usr 2021-11-20T08:00:43,129 creating build/bdist.linux-armv7l/wheel/usr/bin 2021-11-20T08:00:43,132 copying ext/rnaseqc -> build/bdist.linux-armv7l/wheel/usr/bin 2021-11-20T08:00:44,066 copying ext/peertool -> build/bdist.linux-armv7l/wheel/usr/bin 2021-11-20T08:00:46,270 running install_egg_info 2021-11-20T08:00:46,312 running egg_info 2021-11-20T08:00:46,314 writing glh_test.egg-info/PKG-INFO 2021-11-20T08:00:46,319 writing requirements to glh_test.egg-info/requires.txt 2021-11-20T08:00:46,321 writing top-level names to glh_test.egg-info/top_level.txt 2021-11-20T08:00:46,324 writing dependency_links to glh_test.egg-info/dependency_links.txt 2021-11-20T08:00:46,345 reading manifest file 'glh_test.egg-info/SOURCES.txt' 2021-11-20T08:00:46,357 writing manifest file 'glh_test.egg-info/SOURCES.txt' 2021-11-20T08:00:46,360 Copying glh_test.egg-info to build/bdist.linux-armv7l/wheel/glh_test-0.0.2-py3.5.egg-info 2021-11-20T08:00:46,387 running install_scripts 2021-11-20T08:00:46,526 creating build/bdist.linux-armv7l/wheel/glh_test-0.0.2.data/scripts 2021-11-20T08:00:46,528 copying build/scripts-3.5/moder.py -> build/bdist.linux-armv7l/wheel/glh_test-0.0.2.data/scripts 2021-11-20T08:00:46,534 changing mode of build/bdist.linux-armv7l/wheel/glh_test-0.0.2.data/scripts/moder.py to 755 2021-11-20T08:00:46,616 creating build/bdist.linux-armv7l/wheel/glh_test-0.0.2.dist-info/WHEEL 2021-11-20T08:01:02,480 Building wheel for glh-test (setup.py): finished with status 'done' 2021-11-20T08:01:02,750 Created wheel for glh-test: filename=glh_test-0.0.2-py3-none-any.whl size=16155093 sha256=921a5d60e0e0b92ce26aa8f38642a932c8116b187b3bd8f8195b73d1fa18fe90 2021-11-20T08:01:02,751 Stored in directory: /tmp/pip-ephem-wheel-cache-g8vzqswy/wheels/58/b7/d4/78ccc5ff404602be7433b875799c192ad2adb1873eeccb2fc4 2021-11-20T08:01:02,780 Successfully built glh-test 2021-11-20T08:01:05,575 Removed build tracker: '/tmp/pip-req-tracker-smt1lfvq'