2021-11-23T16:01:53,150 Created temporary directory: /tmp/pip-ephem-wheel-cache-d80ouikn 2021-11-23T16:01:53,157 Created temporary directory: /tmp/pip-req-tracker-ey820af8 2021-11-23T16:01:53,158 Initialized build tracking at /tmp/pip-req-tracker-ey820af8 2021-11-23T16:01:53,158 Created build tracker: /tmp/pip-req-tracker-ey820af8 2021-11-23T16:01:53,159 Entered build tracker: /tmp/pip-req-tracker-ey820af8 2021-11-23T16:01:53,160 Created temporary directory: /tmp/pip-wheel-8o9jehwg 2021-11-23T16:01:53,218 Looking in indexes: https://pypi.org/simple, https://www.piwheels.org/simple 2021-11-23T16:01:53,222 2 location(s) to search for versions of redlionfish: 2021-11-23T16:01:53,222 * https://pypi.org/simple/redlionfish/ 2021-11-23T16:01:53,222 * https://www.piwheels.org/simple/redlionfish/ 2021-11-23T16:01:53,222 Fetching project page and analyzing links: https://pypi.org/simple/redlionfish/ 2021-11-23T16:01:53,225 Getting page https://pypi.org/simple/redlionfish/ 2021-11-23T16:01:53,229 Found index url https://pypi.org/simple 2021-11-23T16:01:53,575 Found link https://files.pythonhosted.org/packages/e2/80/6e9fb6768c2d95a6f00a8b1622a41d2a832129aa39525275a72944b275c2/RedLionfish-0.4.tar.gz#sha256=4526183cf061b27c4d5032d3473b4a65880971c6624f2c899d41e7d6bc858aa0 (from https://pypi.org/simple/redlionfish/), version: 0.4 2021-11-23T16:01:53,577 Skipping link: No binaries permitted for redlionfish: https://files.pythonhosted.org/packages/52/84/c44c2fc5d02a8e793b3127ebcfbc648856a2825db77fe2c1100ea771f38a/RedLionfish-0.5-py3-none-any.whl#sha256=396a8ea783fd1860f424748c58f92b0b76112366f1059921db1f367142adcaf8 (from https://pypi.org/simple/redlionfish/) 2021-11-23T16:01:53,577 Found link https://files.pythonhosted.org/packages/5a/c4/a642f9cc7ff274e0d40fbac66ab3ebf1a47b1b0e4f1bf610a5957d8a653c/RedLionfish-0.5.tar.gz#sha256=2590ac98a91e0ace4d081af8a424d7f7018f48ac8fe55a176378200249d95ece (from https://pypi.org/simple/redlionfish/), version: 0.5 2021-11-23T16:01:53,578 Fetching project page and analyzing links: https://www.piwheels.org/simple/redlionfish/ 2021-11-23T16:01:53,579 Getting page https://www.piwheels.org/simple/redlionfish/ 2021-11-23T16:01:53,581 Found index url https://www.piwheels.org/simple 2021-11-23T16:01:53,790 Skipping link: No binaries permitted for redlionfish: https://www.piwheels.org/simple/redlionfish/RedLionfish-0.4-py3-none-any.whl#sha256=18ed47a0a09524f391d6ffd705939d816086ec9d8a4423bb7e0b4974718365c7 (from https://www.piwheels.org/simple/redlionfish/) 2021-11-23T16:01:53,821 Given no hashes to check 1 links for project 'redlionfish': discarding no candidates 2021-11-23T16:01:53,853 Collecting redlionfish==0.5 2021-11-23T16:01:53,857 Created temporary directory: /tmp/pip-unpack-9rzy43ps 2021-11-23T16:01:54,076 Downloading RedLionfish-0.5.tar.gz (20 kB) 2021-11-23T16:01:54,246 Added redlionfish==0.5 from https://files.pythonhosted.org/packages/5a/c4/a642f9cc7ff274e0d40fbac66ab3ebf1a47b1b0e4f1bf610a5957d8a653c/RedLionfish-0.5.tar.gz#sha256=2590ac98a91e0ace4d081af8a424d7f7018f48ac8fe55a176378200249d95ece to build tracker '/tmp/pip-req-tracker-ey820af8' 2021-11-23T16:01:54,250 Running setup.py (path:/tmp/pip-wheel-8o9jehwg/redlionfish_04e242c39dd84cfe93eca506e4fc6b8b/setup.py) egg_info for package redlionfish 2021-11-23T16:01:54,252 Created temporary directory: /tmp/pip-pip-egg-info-353k3p_v 2021-11-23T16:01:54,253 Running command python setup.py egg_info 2021-11-23T16:01:56,079 Note this software can use GPU accelation using PyOpenCL and Reikna. 2021-11-23T16:01:56,080 Please install these packages seperately. 2021-11-23T16:01:56,081 The PyOpenCL package available through pip may not install correctly and/or provide access to GPU. 2021-11-23T16:01:56,081 The best way to install PyOpenCL+Reikna in a python environment is by using anaconda/conda envirnonments. 2021-11-23T16:01:56,082 See more information here: https://documen.tician.de/pyopencl/misc.html 2021-11-23T16:01:56,083 If PyOpenCL+Reikna packages are not available, RedLionfish can still run but it will use CPU backend of scipy FFT routines, which can be slow. 2021-11-23T16:01:56,116 running egg_info 2021-11-23T16:01:56,122 creating /tmp/pip-pip-egg-info-353k3p_v/RedLionfish.egg-info 2021-11-23T16:01:56,125 writing entry points to /tmp/pip-pip-egg-info-353k3p_v/RedLionfish.egg-info/entry_points.txt 2021-11-23T16:01:56,128 writing top-level names to /tmp/pip-pip-egg-info-353k3p_v/RedLionfish.egg-info/top_level.txt 2021-11-23T16:01:56,130 writing /tmp/pip-pip-egg-info-353k3p_v/RedLionfish.egg-info/PKG-INFO 2021-11-23T16:01:56,137 writing dependency_links to /tmp/pip-pip-egg-info-353k3p_v/RedLionfish.egg-info/dependency_links.txt 2021-11-23T16:01:56,139 writing requirements to /tmp/pip-pip-egg-info-353k3p_v/RedLionfish.egg-info/requires.txt 2021-11-23T16:01:56,144 writing manifest file '/tmp/pip-pip-egg-info-353k3p_v/RedLionfish.egg-info/SOURCES.txt' 2021-11-23T16:01:56,501 reading manifest file '/tmp/pip-pip-egg-info-353k3p_v/RedLionfish.egg-info/SOURCES.txt' 2021-11-23T16:01:56,509 writing manifest file '/tmp/pip-pip-egg-info-353k3p_v/RedLionfish.egg-info/SOURCES.txt' 2021-11-23T16:01:56,646 Source in /tmp/pip-wheel-8o9jehwg/redlionfish_04e242c39dd84cfe93eca506e4fc6b8b has version 0.5, which satisfies requirement redlionfish==0.5 from https://files.pythonhosted.org/packages/5a/c4/a642f9cc7ff274e0d40fbac66ab3ebf1a47b1b0e4f1bf610a5957d8a653c/RedLionfish-0.5.tar.gz#sha256=2590ac98a91e0ace4d081af8a424d7f7018f48ac8fe55a176378200249d95ece 2021-11-23T16:01:56,648 Removed redlionfish==0.5 from https://files.pythonhosted.org/packages/5a/c4/a642f9cc7ff274e0d40fbac66ab3ebf1a47b1b0e4f1bf610a5957d8a653c/RedLionfish-0.5.tar.gz#sha256=2590ac98a91e0ace4d081af8a424d7f7018f48ac8fe55a176378200249d95ece from build tracker '/tmp/pip-req-tracker-ey820af8' 2021-11-23T16:01:56,659 Created temporary directory: /tmp/pip-unpack-8ti65drd 2021-11-23T16:01:56,660 Building wheels for collected packages: redlionfish 2021-11-23T16:01:56,668 Created temporary directory: /tmp/pip-wheel-b5yglcmd 2021-11-23T16:01:56,669 Building wheel for redlionfish (setup.py): started 2021-11-23T16:01:56,670 Destination directory: /tmp/pip-wheel-b5yglcmd 2021-11-23T16:01:56,670 Running command /usr/bin/python3 -u -c 'import sys, setuptools, tokenize; sys.argv[0] = '"'"'/tmp/pip-wheel-8o9jehwg/redlionfish_04e242c39dd84cfe93eca506e4fc6b8b/setup.py'"'"'; __file__='"'"'/tmp/pip-wheel-8o9jehwg/redlionfish_04e242c39dd84cfe93eca506e4fc6b8b/setup.py'"'"';f=getattr(tokenize, '"'"'open'"'"', open)(__file__);code=f.read().replace('"'"'\r\n'"'"', '"'"'\n'"'"');f.close();exec(compile(code, __file__, '"'"'exec'"'"'))' bdist_wheel -d /tmp/pip-wheel-b5yglcmd 2021-11-23T16:01:58,168 Note this software can use GPU accelation using PyOpenCL and Reikna. 2021-11-23T16:01:58,169 Please install these packages seperately. 2021-11-23T16:01:58,170 The PyOpenCL package available through pip may not install correctly and/or provide access to GPU. 2021-11-23T16:01:58,170 The best way to install PyOpenCL+Reikna in a python environment is by using anaconda/conda envirnonments. 2021-11-23T16:01:58,171 See more information here: https://documen.tician.de/pyopencl/misc.html 2021-11-23T16:01:58,171 If PyOpenCL+Reikna packages are not available, RedLionfish can still run but it will use CPU backend of scipy FFT routines, which can be slow. 2021-11-23T16:01:58,549 running bdist_wheel 2021-11-23T16:01:58,562 running build 2021-11-23T16:01:58,563 running build_py 2021-11-23T16:01:58,899 creating build 2021-11-23T16:01:58,900 creating build/lib 2021-11-23T16:01:58,901 creating build/lib/RedLionfishDeconv 2021-11-23T16:01:58,904 copying RedLionfishDeconv/RLDeconv3DReiknaOCL.py -> build/lib/RedLionfishDeconv 2021-11-23T16:01:58,910 copying RedLionfishDeconv/helperfunctions.py -> build/lib/RedLionfishDeconv 2021-11-23T16:01:58,915 copying RedLionfishDeconv/RLDeconv3DScipy.py -> build/lib/RedLionfishDeconv 2021-11-23T16:01:58,920 copying RedLionfishDeconv/napari_plugin.py -> build/lib/RedLionfishDeconv 2021-11-23T16:01:58,924 copying RedLionfishDeconv/__init__.py -> build/lib/RedLionfishDeconv 2021-11-23T16:01:58,928 copying RedLionfishDeconv/RLDeconvolve.py -> build/lib/RedLionfishDeconv 2021-11-23T16:01:58,940 installing to build/bdist.linux-armv7l/wheel 2021-11-23T16:01:58,940 running install 2021-11-23T16:01:58,942 running install_lib 2021-11-23T16:01:58,949 creating build/bdist.linux-armv7l 2021-11-23T16:01:58,950 creating build/bdist.linux-armv7l/wheel 2021-11-23T16:01:58,954 creating build/bdist.linux-armv7l/wheel/RedLionfishDeconv 2021-11-23T16:01:58,957 copying build/lib/RedLionfishDeconv/RLDeconv3DReiknaOCL.py -> build/bdist.linux-armv7l/wheel/RedLionfishDeconv 2021-11-23T16:01:58,963 copying build/lib/RedLionfishDeconv/helperfunctions.py -> build/bdist.linux-armv7l/wheel/RedLionfishDeconv 2021-11-23T16:01:58,968 copying build/lib/RedLionfishDeconv/RLDeconv3DScipy.py -> build/bdist.linux-armv7l/wheel/RedLionfishDeconv 2021-11-23T16:01:58,975 copying build/lib/RedLionfishDeconv/napari_plugin.py -> build/bdist.linux-armv7l/wheel/RedLionfishDeconv 2021-11-23T16:01:58,981 copying build/lib/RedLionfishDeconv/__init__.py -> build/bdist.linux-armv7l/wheel/RedLionfishDeconv 2021-11-23T16:01:58,986 copying build/lib/RedLionfishDeconv/RLDeconvolve.py -> build/bdist.linux-armv7l/wheel/RedLionfishDeconv 2021-11-23T16:01:58,991 running install_egg_info 2021-11-23T16:01:59,035 running egg_info 2021-11-23T16:01:59,036 writing dependency_links to RedLionfish.egg-info/dependency_links.txt 2021-11-23T16:01:59,039 writing entry points to RedLionfish.egg-info/entry_points.txt 2021-11-23T16:01:59,042 writing RedLionfish.egg-info/PKG-INFO 2021-11-23T16:01:59,047 writing top-level names to RedLionfish.egg-info/top_level.txt 2021-11-23T16:01:59,049 writing requirements to RedLionfish.egg-info/requires.txt 2021-11-23T16:01:59,060 reading manifest file 'RedLionfish.egg-info/SOURCES.txt' 2021-11-23T16:01:59,070 writing manifest file 'RedLionfish.egg-info/SOURCES.txt' 2021-11-23T16:01:59,074 Copying RedLionfish.egg-info to build/bdist.linux-armv7l/wheel/RedLionfish-0.5-py3.5.egg-info 2021-11-23T16:01:59,112 running install_scripts 2021-11-23T16:01:59,313 creating build/bdist.linux-armv7l/wheel/RedLionfish-0.5.dist-info/WHEEL 2021-11-23T16:01:59,538 Building wheel for redlionfish (setup.py): finished with status 'done' 2021-11-23T16:01:59,542 Created wheel for redlionfish: filename=RedLionfish-0.5-py3-none-any.whl size=19083 sha256=1d4b3012d7feb87012324f5ec2741765ecbf84a55c900136ead6884c32c7d033 2021-11-23T16:01:59,543 Stored in directory: /tmp/pip-ephem-wheel-cache-d80ouikn/wheels/92/20/3f/f49a57d17e1e6c296bb0a278980ded4e9f3e3bc3f05153b8a1 2021-11-23T16:01:59,563 Successfully built redlionfish 2021-11-23T16:01:59,571 Removed build tracker: '/tmp/pip-req-tracker-ey820af8'