2021-11-26T22:15:36,631 Created temporary directory: /tmp/pip-ephem-wheel-cache-6yvwzn1e
2021-11-26T22:15:36,638 Created temporary directory: /tmp/pip-req-tracker-f3igskuy
2021-11-26T22:15:36,639 Initialized build tracking at /tmp/pip-req-tracker-f3igskuy
2021-11-26T22:15:36,639 Created build tracker: /tmp/pip-req-tracker-f3igskuy
2021-11-26T22:15:36,639 Entered build tracker: /tmp/pip-req-tracker-f3igskuy
2021-11-26T22:15:36,641 Created temporary directory: /tmp/pip-wheel-9vc1gblz
2021-11-26T22:15:36,698 Looking in indexes: https://pypi.org/simple, https://www.piwheels.org/simple
2021-11-26T22:15:36,701 2 location(s) to search for versions of amptk:
2021-11-26T22:15:36,701 * https://pypi.org/simple/amptk/
2021-11-26T22:15:36,701 * https://www.piwheels.org/simple/amptk/
2021-11-26T22:15:36,702 Fetching project page and analyzing links: https://pypi.org/simple/amptk/
2021-11-26T22:15:36,704 Getting page https://pypi.org/simple/amptk/
2021-11-26T22:15:36,709 Found index url https://pypi.org/simple
2021-11-26T22:15:37,063   Skipping link: No binaries permitted for amptk: https://files.pythonhosted.org/packages/6f/34/5ca4622b12ca9815635d87f325b9190fe542592142dc9f9c940ee797be1b/amptk-1.3.0-py2-none-any.whl#sha256=cbff82063cd96b1e46e81b8ccd6e84dc190ee5358d423cb91d9ffa792644aa8d (from https://pypi.org/simple/amptk/) (requires-python:>=2.7.0)
2021-11-26T22:15:37,064   Skipping link: No binaries permitted for amptk: https://files.pythonhosted.org/packages/c8/87/34c1a064653f16cc2ef7d687a7f1c35ebc5bf25afe6f906fa5463e5c54fa/amptk-1.3.0-py2.py3-none-any.whl#sha256=8502607eae1183f73efbc26933d8c033262fdcf33846ebbb7a90644640ec5c15 (from https://pypi.org/simple/amptk/) (requires-python:>=2.7.0)
2021-11-26T22:15:37,066   Found link https://files.pythonhosted.org/packages/cf/56/2d5affae81bdf311d7d23faa4758ad387d5fd572ac503a5c90897b339796/amptk-1.3.0.tar.gz#sha256=bb9b406c98685b446bd85c9377ce974b709e789165aff82a2ab9454c2e5c4bdb (from https://pypi.org/simple/amptk/) (requires-python:>=2.7.0), version: 1.3.0
2021-11-26T22:15:37,067   Skipping link: No binaries permitted for amptk: https://files.pythonhosted.org/packages/79/90/56fd4e5542392026e884ed2c47914fad850f7747e5632c1b6bbe4315e942/amptk-1.4.0-py2.py3-none-any.whl#sha256=8266c953d249d11e5c2623795bc2b90e1326dabe5710673aadd421b8a0c047eb (from https://pypi.org/simple/amptk/) (requires-python:>=2.7.0, !=3.0.*, !=3.1.*, !=3.2.*, <4)
2021-11-26T22:15:37,070   Found link https://files.pythonhosted.org/packages/d6/85/35dbea394dc7414c23e2eae6b05658b64705fe98e9126b311961108702c1/amptk-1.4.0.tar.gz#sha256=98d3c6e7e88365e621dc060ad58075a8d13ba06959a943b180af2dc0642f416a (from https://pypi.org/simple/amptk/) (requires-python:>=2.7.0, !=3.0.*, !=3.1.*, !=3.2.*, <4), version: 1.4.0
2021-11-26T22:15:37,071   Skipping link: No binaries permitted for amptk: https://files.pythonhosted.org/packages/03/51/4537d37e9f48889e17b7bc5e52dc369a785f2d97542c06ceafd808f76a1b/amptk-1.4.1-py2.py3-none-any.whl#sha256=1205d11db04015915cefe912d7f4caf0c0a62c30628c9864ac56ffb6335717f5 (from https://pypi.org/simple/amptk/) (requires-python:>=2.7.0, !=3.0.*, !=3.1.*, !=3.2.*, <4)
2021-11-26T22:15:37,074   Found link https://files.pythonhosted.org/packages/57/06/2a7e9d73de4c33f1b3d2b09dc51b221da5c9efb77433c19c61b555040470/amptk-1.4.1.tar.gz#sha256=d540028cf1db1c0bac30ec09120b0135d5ab488cb22fdec2dcf1901c0e36d2ed (from https://pypi.org/simple/amptk/) (requires-python:>=2.7.0, !=3.0.*, !=3.1.*, !=3.2.*, <4), version: 1.4.1
2021-11-26T22:15:37,075   Skipping link: No binaries permitted for amptk: https://files.pythonhosted.org/packages/91/79/4a6582435ef35f66de33becafaade0caef9af42be9bb241775b44a599c50/amptk-1.4.2-py2.py3-none-any.whl#sha256=6269e5d4c32d93d0f99446afab777ded0ae4b4ce2a1eef628acb16b36e237209 (from https://pypi.org/simple/amptk/) (requires-python:>=2.7.0, !=3.0.*, !=3.1.*, !=3.2.*, <4)
2021-11-26T22:15:37,079   Found link https://files.pythonhosted.org/packages/d5/7b/b0e7232b8f180d83fc1f2d8e9c3639a43d7da52c84600a2bd70341ab1d7e/amptk-1.4.2.tar.gz#sha256=ba631626370e9055afa0dbca5ba534a778919678dc6472ce4e13074cfab43ae5 (from https://pypi.org/simple/amptk/) (requires-python:>=2.7.0, !=3.0.*, !=3.1.*, !=3.2.*, <4), version: 1.4.2
2021-11-26T22:15:37,080   Skipping link: No binaries permitted for amptk: https://files.pythonhosted.org/packages/cb/cc/bb79cd3ec020d571560a26b84975e414c2de200a3ba27dab9f1cf35990cc/amptk-1.5.0-py2.py3-none-any.whl#sha256=3de21ef89f2b5ef3820b3a60e623177ccf1e6d2036a0097245a6d58de4ce6f77 (from https://pypi.org/simple/amptk/) (requires-python:>=2.7.0, !=3.0.*, !=3.1.*, !=3.2.*, <4)
2021-11-26T22:15:37,083   Found link https://files.pythonhosted.org/packages/7a/de/454cf109ce14c3fd2435860231a87e157ccc2e59f237e052ae9869568880/amptk-1.5.0.tar.gz#sha256=a7fc2ecb5e4621a1976209e982791fa80b8db15c0abf44a4adc50b75775a92ac (from https://pypi.org/simple/amptk/) (requires-python:>=2.7.0, !=3.0.*, !=3.1.*, !=3.2.*, <4), version: 1.5.0
2021-11-26T22:15:37,084   Skipping link: No binaries permitted for amptk: https://files.pythonhosted.org/packages/c8/b3/b1839528e3602062043ba88c91b6eb8a7f8713a3d1e80699677d90c38baa/amptk-1.5.1-py2.py3-none-any.whl#sha256=3b78af6b110512d4aee660433a3abf41c5edfed2df26458dddba9684e1262e51 (from https://pypi.org/simple/amptk/) (requires-python:>=2.7.0, !=3.0.*, !=3.1.*, !=3.2.*, <3.8)
2021-11-26T22:15:37,088   Found link https://files.pythonhosted.org/packages/8d/cc/5b4adb595d64c5dfb6093e98a233a9dd9486ac0c9661dfd47e9f74c089e9/amptk-1.5.1.tar.gz#sha256=af563e74b6da0306390cc9ea809528986c92737ae4f427f69a29134d39fc11a0 (from https://pypi.org/simple/amptk/) (requires-python:>=2.7.0, !=3.0.*, !=3.1.*, !=3.2.*, <3.8), version: 1.5.1
2021-11-26T22:15:37,089   Skipping link: No binaries permitted for amptk: https://files.pythonhosted.org/packages/f5/e0/a138b50ea63c83718fa62f51a5710fb03aea5fac478121d4fcb56c7660b7/amptk-1.5.2-py3-none-any.whl#sha256=dbe2da7f1d918a5205c2d629da87d69c2e2dd59f8da1c02f0f1a81953617a910 (from https://pypi.org/simple/amptk/) (requires-python:>=2.7.0, !=3.0.*, !=3.1.*, !=3.2.*, <3.8)
2021-11-26T22:15:37,092   Found link https://files.pythonhosted.org/packages/64/32/bc98a54a9d75211351c1ccdf62d8b827866a43c6340ee921d5716ffbd572/amptk-1.5.2.tar.gz#sha256=1689d328abe5bd63084e447c429b9ea23a5b7cd017f0560bb9358c7b419d4441 (from https://pypi.org/simple/amptk/) (requires-python:>=2.7.0, !=3.0.*, !=3.1.*, !=3.2.*, <3.8), version: 1.5.2
2021-11-26T22:15:37,093   Skipping link: No binaries permitted for amptk: https://files.pythonhosted.org/packages/ea/00/d81c9bee0879366f5b3b47266608893062da2956cb48480985d1ff7ae522/amptk-1.5.3-py3-none-any.whl#sha256=a8a34d1a9d2bc9c48ddc2683be060588b635b7324c590797f02b08ebc8958004 (from https://pypi.org/simple/amptk/) (requires-python:>=2.7.0, !=3.0.*, !=3.1.*, !=3.2.*)
2021-11-26T22:15:37,096   Found link https://files.pythonhosted.org/packages/71/61/907c876d48777630aee0fa84ddab34a024fd59355c10f8a99cfab0c0e1dd/amptk-1.5.3.tar.gz#sha256=070f19860710c3c778025fa4c3bbdf0bdcd9388c4e7028451909bfe6bddc928f (from https://pypi.org/simple/amptk/) (requires-python:>=2.7.0, !=3.0.*, !=3.1.*, !=3.2.*), version: 1.5.3
2021-11-26T22:15:37,097   Skipping link: No binaries permitted for amptk: https://files.pythonhosted.org/packages/86/78/6d81364da40abd0a3e3c8d05b7926d725bb11f66a9a1fa85e253125e18fa/amptk-1.5.4-py3-none-any.whl#sha256=d0c560b5e5d3dd56cc0ce823b94b4abfdabde35ba7d7a7383c5208934d28a424 (from https://pypi.org/simple/amptk/) (requires-python:>=2.7.0, !=3.0.*, !=3.1.*, !=3.2.*)
2021-11-26T22:15:37,100   Found link https://files.pythonhosted.org/packages/57/ea/be2bde6a861e1fc7557b509e44ecae291f7bef60d72a26fe4e724161c584/amptk-1.5.4.tar.gz#sha256=f6ddedccb56f39624bd825c504f15823c4ff1d5d0539ebe746405696c77ce69d (from https://pypi.org/simple/amptk/) (requires-python:>=2.7.0, !=3.0.*, !=3.1.*, !=3.2.*), version: 1.5.4
2021-11-26T22:15:37,101 Fetching project page and analyzing links: https://www.piwheels.org/simple/amptk/
2021-11-26T22:15:37,102 Getting page https://www.piwheels.org/simple/amptk/
2021-11-26T22:15:37,104 Found index url https://www.piwheels.org/simple
2021-11-26T22:15:37,345   Skipping link: No binaries permitted for amptk: https://www.piwheels.org/simple/amptk/amptk-1.3.0-py3-none-any.whl#sha256=d4b626c7af06d0dfdb92e6f0ea0f04f31eb30e7268adaa467cb50de59415a6cd (from https://www.piwheels.org/simple/amptk/) (requires-python:>=2.7.0)
2021-11-26T22:15:37,346   Skipping link: No binaries permitted for amptk: https://www.piwheels.org/simple/amptk/amptk-1.4.0-py2.py3-none-any.whl#sha256=8266c953d249d11e5c2623795bc2b90e1326dabe5710673aadd421b8a0c047eb (from https://www.piwheels.org/simple/amptk/) (requires-python:>=2.7.0, !=3.0.*, !=3.1.*, !=3.2.*, <4)
2021-11-26T22:15:37,347   Skipping link: No binaries permitted for amptk: https://www.piwheels.org/simple/amptk/amptk-1.4.1-py2.py3-none-any.whl#sha256=1205d11db04015915cefe912d7f4caf0c0a62c30628c9864ac56ffb6335717f5 (from https://www.piwheels.org/simple/amptk/) (requires-python:>=2.7.0, !=3.0.*, !=3.1.*, !=3.2.*, <4)
2021-11-26T22:15:37,347   Skipping link: No binaries permitted for amptk: https://www.piwheels.org/simple/amptk/amptk-1.4.2-py2.py3-none-any.whl#sha256=6269e5d4c32d93d0f99446afab777ded0ae4b4ce2a1eef628acb16b36e237209 (from https://www.piwheels.org/simple/amptk/) (requires-python:>=2.7.0, !=3.0.*, !=3.1.*, !=3.2.*, <4)
2021-11-26T22:15:37,348   Skipping link: No binaries permitted for amptk: https://www.piwheels.org/simple/amptk/amptk-1.5.0-py2.py3-none-any.whl#sha256=3de21ef89f2b5ef3820b3a60e623177ccf1e6d2036a0097245a6d58de4ce6f77 (from https://www.piwheels.org/simple/amptk/) (requires-python:>=2.7.0, !=3.0.*, !=3.1.*, !=3.2.*, <4)
2021-11-26T22:15:37,349   Skipping link: No binaries permitted for amptk: https://www.piwheels.org/simple/amptk/amptk-1.5.1-py2.py3-none-any.whl#sha256=3b78af6b110512d4aee660433a3abf41c5edfed2df26458dddba9684e1262e51 (from https://www.piwheels.org/simple/amptk/) (requires-python:>=2.7.0, !=3.0.*, !=3.1.*, !=3.2.*, <3.8)
2021-11-26T22:15:37,349   Skipping link: No binaries permitted for amptk: https://www.piwheels.org/simple/amptk/amptk-1.5.2-py3-none-any.whl#sha256=dbe2da7f1d918a5205c2d629da87d69c2e2dd59f8da1c02f0f1a81953617a910 (from https://www.piwheels.org/simple/amptk/) (requires-python:>=2.7.0, !=3.0.*, !=3.1.*, !=3.2.*, <3.8)
2021-11-26T22:15:37,350   Skipping link: No binaries permitted for amptk: https://www.piwheels.org/simple/amptk/amptk-1.5.3-py3-none-any.whl#sha256=c0ceab7c24b276ab3d24602c264b0e6821cdbb5501152543d914f4b6f19cffeb (from https://www.piwheels.org/simple/amptk/) (requires-python:>=2.7.0, !=3.0.*, !=3.1.*, !=3.2.*)
2021-11-26T22:15:37,383 Given no hashes to check 1 links for project 'amptk': discarding no candidates
2021-11-26T22:15:37,415 Collecting amptk==1.5.4
2021-11-26T22:15:37,419   Created temporary directory: /tmp/pip-unpack-nps3hnzr
2021-11-26T22:15:37,905   Downloading amptk-1.5.4.tar.gz (2.1 MB)
2021-11-26T22:15:39,546   Added amptk==1.5.4 from https://files.pythonhosted.org/packages/57/ea/be2bde6a861e1fc7557b509e44ecae291f7bef60d72a26fe4e724161c584/amptk-1.5.4.tar.gz#sha256=f6ddedccb56f39624bd825c504f15823c4ff1d5d0539ebe746405696c77ce69d to build tracker '/tmp/pip-req-tracker-f3igskuy'
2021-11-26T22:15:39,548     Running setup.py (path:/tmp/pip-wheel-9vc1gblz/amptk_779cd3c998734227b77bc1752377b946/setup.py) egg_info for package amptk
2021-11-26T22:15:39,550     Created temporary directory: /tmp/pip-pip-egg-info-5b148z71
2021-11-26T22:15:39,551     Running command python setup.py egg_info
2021-11-26T22:15:41,504     running egg_info
2021-11-26T22:15:41,510     creating /tmp/pip-pip-egg-info-5b148z71/amptk.egg-info
2021-11-26T22:15:41,512     writing /tmp/pip-pip-egg-info-5b148z71/amptk.egg-info/PKG-INFO
2021-11-26T22:15:41,516     writing requirements to /tmp/pip-pip-egg-info-5b148z71/amptk.egg-info/requires.txt
2021-11-26T22:15:41,519     writing dependency_links to /tmp/pip-pip-egg-info-5b148z71/amptk.egg-info/dependency_links.txt
2021-11-26T22:15:41,521     writing entry points to /tmp/pip-pip-egg-info-5b148z71/amptk.egg-info/entry_points.txt
2021-11-26T22:15:41,524     writing top-level names to /tmp/pip-pip-egg-info-5b148z71/amptk.egg-info/top_level.txt
2021-11-26T22:15:41,528     writing manifest file '/tmp/pip-pip-egg-info-5b148z71/amptk.egg-info/SOURCES.txt'
2021-11-26T22:15:41,903     reading manifest file '/tmp/pip-pip-egg-info-5b148z71/amptk.egg-info/SOURCES.txt'
2021-11-26T22:15:41,906     reading manifest template 'MANIFEST.in'
2021-11-26T22:15:41,929     writing manifest file '/tmp/pip-pip-egg-info-5b148z71/amptk.egg-info/SOURCES.txt'
2021-11-26T22:15:42,062   Source in /tmp/pip-wheel-9vc1gblz/amptk_779cd3c998734227b77bc1752377b946 has version 1.5.4, which satisfies requirement amptk==1.5.4 from https://files.pythonhosted.org/packages/57/ea/be2bde6a861e1fc7557b509e44ecae291f7bef60d72a26fe4e724161c584/amptk-1.5.4.tar.gz#sha256=f6ddedccb56f39624bd825c504f15823c4ff1d5d0539ebe746405696c77ce69d
2021-11-26T22:15:42,064   Removed amptk==1.5.4 from https://files.pythonhosted.org/packages/57/ea/be2bde6a861e1fc7557b509e44ecae291f7bef60d72a26fe4e724161c584/amptk-1.5.4.tar.gz#sha256=f6ddedccb56f39624bd825c504f15823c4ff1d5d0539ebe746405696c77ce69d from build tracker '/tmp/pip-req-tracker-f3igskuy'
2021-11-26T22:15:42,081 Created temporary directory: /tmp/pip-unpack-8674x3wj
2021-11-26T22:15:42,082 Building wheels for collected packages: amptk
2021-11-26T22:15:42,090   Created temporary directory: /tmp/pip-wheel-s6o2x7sp
2021-11-26T22:15:42,091   Building wheel for amptk (setup.py): started
2021-11-26T22:15:42,092   Destination directory: /tmp/pip-wheel-s6o2x7sp
2021-11-26T22:15:42,093   Running command /usr/bin/python3 -u -c 'import sys, setuptools, tokenize; sys.argv[0] = '"'"'/tmp/pip-wheel-9vc1gblz/amptk_779cd3c998734227b77bc1752377b946/setup.py'"'"'; __file__='"'"'/tmp/pip-wheel-9vc1gblz/amptk_779cd3c998734227b77bc1752377b946/setup.py'"'"';f=getattr(tokenize, '"'"'open'"'"', open)(__file__);code=f.read().replace('"'"'\r\n'"'"', '"'"'\n'"'"');f.close();exec(compile(code, __file__, '"'"'exec'"'"'))' bdist_wheel -d /tmp/pip-wheel-s6o2x7sp
2021-11-26T22:15:44,036   running bdist_wheel
2021-11-26T22:15:44,050   running build
2021-11-26T22:15:44,051   running build_py
2021-11-26T22:15:44,391   creating build
2021-11-26T22:15:44,392   creating build/lib
2021-11-26T22:15:44,393   creating build/lib/amptk
2021-11-26T22:15:44,396   copying amptk/OTU_cluster_ref.py -> build/lib/amptk
2021-11-26T22:15:44,402   copying amptk/remove_samples.py -> build/lib/amptk
2021-11-26T22:15:44,407   copying amptk/dada2_pacbio.py -> build/lib/amptk
2021-11-26T22:15:44,412   copying amptk/csv2heatmap.py -> build/lib/amptk
2021-11-26T22:15:44,417   copying amptk/amptk.py -> build/lib/amptk
2021-11-26T22:15:44,427   copying amptk/info.py -> build/lib/amptk
2021-11-26T22:15:44,433   copying amptk/process_illumina2.py -> build/lib/amptk
2021-11-26T22:15:44,441   copying amptk/heatmap.py -> build/lib/amptk
2021-11-26T22:15:44,447   copying amptk/pybam.py -> build/lib/amptk
2021-11-26T22:15:44,459   copying amptk/fastq2sra.py -> build/lib/amptk
2021-11-26T22:15:44,466   copying amptk/collapse_taxonomy.py -> build/lib/amptk
2021-11-26T22:15:44,470   copying amptk/stackedBarGraph.py -> build/lib/amptk
2021-11-26T22:15:44,476   copying amptk/assign_taxonomy.py -> build/lib/amptk
2021-11-26T22:15:44,484   copying amptk/funguild.py -> build/lib/amptk
2021-11-26T22:15:44,491   copying amptk/unoise2.py -> build/lib/amptk
2021-11-26T22:15:44,498   copying amptk/keep_samples.py -> build/lib/amptk
2021-11-26T22:15:44,504   copying amptk/process_pacbio.py -> build/lib/amptk
2021-11-26T22:15:44,512   copying amptk/unoise3.py -> build/lib/amptk
2021-11-26T22:15:44,518   copying amptk/__init__.py -> build/lib/amptk
2021-11-26T22:15:44,524   copying amptk/OTU_cluster.py -> build/lib/amptk
2021-11-26T22:15:44,531   copying amptk/process_illumina_folder.py -> build/lib/amptk
2021-11-26T22:15:44,539   copying amptk/extract_region.py -> build/lib/amptk
2021-11-26T22:15:44,548   copying amptk/dada2.py -> build/lib/amptk
2021-11-26T22:15:44,555   copying amptk/parse_adonis.py -> build/lib/amptk
2021-11-26T22:15:44,560   copying amptk/filter.py -> build/lib/amptk
2021-11-26T22:15:44,569   copying amptk/get_barcode_counts.py -> build/lib/amptk
2021-11-26T22:15:44,576   copying amptk/install.py -> build/lib/amptk
2021-11-26T22:15:44,581   copying amptk/__version__.py -> build/lib/amptk
2021-11-26T22:15:44,586   copying amptk/stats.py -> build/lib/amptk
2021-11-26T22:15:44,593   copying amptk/amptklib.py -> build/lib/amptk
2021-11-26T22:15:44,607   copying amptk/drop.py -> build/lib/amptk
2021-11-26T22:15:44,613   copying amptk/summarize_taxonomy.py -> build/lib/amptk
2021-11-26T22:15:44,620   copying amptk/barcode_rarify.py -> build/lib/amptk
2021-11-26T22:15:44,626   copying amptk/lulu.py -> build/lib/amptk
2021-11-26T22:15:44,632   copying amptk/process_ion.py -> build/lib/amptk
2021-11-26T22:15:44,640   copying amptk/merge_metadata.py -> build/lib/amptk
2021-11-26T22:15:44,647   copying amptk/process_ont.py -> build/lib/amptk
2021-11-26T22:15:44,655   copying amptk/process_illumina_raw.py -> build/lib/amptk
2021-11-26T22:15:44,661   running egg_info
2021-11-26T22:15:44,692   writing dependency_links to amptk.egg-info/dependency_links.txt
2021-11-26T22:15:44,694   writing requirements to amptk.egg-info/requires.txt
2021-11-26T22:15:44,697   writing amptk.egg-info/PKG-INFO
2021-11-26T22:15:44,701   writing top-level names to amptk.egg-info/top_level.txt
2021-11-26T22:15:44,704   writing entry points to amptk.egg-info/entry_points.txt
2021-11-26T22:15:44,718   reading manifest file 'amptk.egg-info/SOURCES.txt'
2021-11-26T22:15:44,727   reading manifest template 'MANIFEST.in'
2021-11-26T22:15:44,751   writing manifest file 'amptk.egg-info/SOURCES.txt'
2021-11-26T22:15:44,759   copying amptk/check_version.R -> build/lib/amptk
2021-11-26T22:15:44,764   copying amptk/dada2_pipeline_nofilt.R -> build/lib/amptk
2021-11-26T22:15:44,769   copying amptk/downloads.json -> build/lib/amptk
2021-11-26T22:15:44,773   copying amptk/phyloseq_nmds.R -> build/lib/amptk
2021-11-26T22:15:44,780   copying amptk/phyloseq_nmds_indicator.R -> build/lib/amptk
2021-11-26T22:15:44,786   copying amptk/primers.json -> build/lib/amptk
2021-11-26T22:15:44,791   copying amptk/runLULU.R -> build/lib/amptk
2021-11-26T22:15:44,796   creating build/lib/amptk/DB
2021-11-26T22:15:44,799   copying amptk/DB/amptk_mock1.fa -> build/lib/amptk/DB
2021-11-26T22:15:44,807   copying amptk/DB/amptk_mock2.fa -> build/lib/amptk/DB
2021-11-26T22:15:44,815   copying amptk/DB/amptk_mock3.fa -> build/lib/amptk/DB
2021-11-26T22:15:44,823   copying amptk/DB/amptk_synmock.fa -> build/lib/amptk/DB
2021-11-26T22:15:44,831   copying amptk/DB/ioncode_barcodes.fa -> build/lib/amptk/DB
2021-11-26T22:15:44,837   copying amptk/DB/ionxpress_barcodes.fa -> build/lib/amptk/DB
2021-11-26T22:15:44,847   running build_scripts
2021-11-26T22:15:44,848   creating build/scripts-3.5
2021-11-26T22:15:44,851   copying and adjusting scripts/bold2utax.py -> build/scripts-3.5
2021-11-26T22:15:44,856   copying and adjusting scripts/amptk_synthetic_mock.py -> build/scripts-3.5
2021-11-26T22:15:44,859   changing mode of build/scripts-3.5/bold2utax.py from 644 to 755
2021-11-26T22:15:44,860   changing mode of build/scripts-3.5/amptk_synthetic_mock.py from 644 to 755
2021-11-26T22:15:44,868   installing to build/bdist.linux-armv7l/wheel
2021-11-26T22:15:44,869   running install
2021-11-26T22:15:44,870   running install_lib
2021-11-26T22:15:44,878   creating build/bdist.linux-armv7l
2021-11-26T22:15:44,879   creating build/bdist.linux-armv7l/wheel
2021-11-26T22:15:44,884   creating build/bdist.linux-armv7l/wheel/amptk
2021-11-26T22:15:44,886   copying build/lib/amptk/phyloseq_nmds.R -> build/bdist.linux-armv7l/wheel/amptk
2021-11-26T22:15:44,892   copying build/lib/amptk/OTU_cluster_ref.py -> build/bdist.linux-armv7l/wheel/amptk
2021-11-26T22:15:44,899   copying build/lib/amptk/remove_samples.py -> build/bdist.linux-armv7l/wheel/amptk
2021-11-26T22:15:44,905   copying build/lib/amptk/dada2_pacbio.py -> build/bdist.linux-armv7l/wheel/amptk
2021-11-26T22:15:44,912   copying build/lib/amptk/downloads.json -> build/bdist.linux-armv7l/wheel/amptk
2021-11-26T22:15:44,917   copying build/lib/amptk/csv2heatmap.py -> build/bdist.linux-armv7l/wheel/amptk
2021-11-26T22:15:44,924   copying build/lib/amptk/amptk.py -> build/bdist.linux-armv7l/wheel/amptk
2021-11-26T22:15:44,934   copying build/lib/amptk/info.py -> build/bdist.linux-armv7l/wheel/amptk
2021-11-26T22:15:44,940   copying build/lib/amptk/process_illumina2.py -> build/bdist.linux-armv7l/wheel/amptk
2021-11-26T22:15:44,948   copying build/lib/amptk/heatmap.py -> build/bdist.linux-armv7l/wheel/amptk
2021-11-26T22:15:44,954   copying build/lib/amptk/pybam.py -> build/bdist.linux-armv7l/wheel/amptk
2021-11-26T22:15:44,965   copying build/lib/amptk/fastq2sra.py -> build/bdist.linux-armv7l/wheel/amptk
2021-11-26T22:15:44,974   copying build/lib/amptk/collapse_taxonomy.py -> build/bdist.linux-armv7l/wheel/amptk
2021-11-26T22:15:44,979   copying build/lib/amptk/stackedBarGraph.py -> build/bdist.linux-armv7l/wheel/amptk
2021-11-26T22:15:44,986   copying build/lib/amptk/assign_taxonomy.py -> build/bdist.linux-armv7l/wheel/amptk
2021-11-26T22:15:44,995   copying build/lib/amptk/runLULU.R -> build/bdist.linux-armv7l/wheel/amptk
2021-11-26T22:15:44,999   copying build/lib/amptk/funguild.py -> build/bdist.linux-armv7l/wheel/amptk
2021-11-26T22:15:45,004   copying build/lib/amptk/unoise2.py -> build/bdist.linux-armv7l/wheel/amptk
2021-11-26T22:15:45,010   copying build/lib/amptk/keep_samples.py -> build/bdist.linux-armv7l/wheel/amptk
2021-11-26T22:15:45,014   copying build/lib/amptk/process_pacbio.py -> build/bdist.linux-armv7l/wheel/amptk
2021-11-26T22:15:45,021   copying build/lib/amptk/unoise3.py -> build/bdist.linux-armv7l/wheel/amptk
2021-11-26T22:15:45,028   copying build/lib/amptk/phyloseq_nmds_indicator.R -> build/bdist.linux-armv7l/wheel/amptk
2021-11-26T22:15:45,035   copying build/lib/amptk/__init__.py -> build/bdist.linux-armv7l/wheel/amptk
2021-11-26T22:15:45,040   copying build/lib/amptk/OTU_cluster.py -> build/bdist.linux-armv7l/wheel/amptk
2021-11-26T22:15:45,047   copying build/lib/amptk/process_illumina_folder.py -> build/bdist.linux-armv7l/wheel/amptk
2021-11-26T22:15:45,055   copying build/lib/amptk/extract_region.py -> build/bdist.linux-armv7l/wheel/amptk
2021-11-26T22:15:45,063   copying build/lib/amptk/primers.json -> build/bdist.linux-armv7l/wheel/amptk
2021-11-26T22:15:45,067   copying build/lib/amptk/dada2.py -> build/bdist.linux-armv7l/wheel/amptk
2021-11-26T22:15:45,073   copying build/lib/amptk/check_version.R -> build/bdist.linux-armv7l/wheel/amptk
2021-11-26T22:15:45,077   copying build/lib/amptk/parse_adonis.py -> build/bdist.linux-armv7l/wheel/amptk
2021-11-26T22:15:45,082   copying build/lib/amptk/filter.py -> build/bdist.linux-armv7l/wheel/amptk
2021-11-26T22:15:45,091   copying build/lib/amptk/get_barcode_counts.py -> build/bdist.linux-armv7l/wheel/amptk
2021-11-26T22:15:45,097   copying build/lib/amptk/install.py -> build/bdist.linux-armv7l/wheel/amptk
2021-11-26T22:15:45,102   copying build/lib/amptk/__version__.py -> build/bdist.linux-armv7l/wheel/amptk
2021-11-26T22:15:45,108   copying build/lib/amptk/stats.py -> build/bdist.linux-armv7l/wheel/amptk
2021-11-26T22:15:45,115   creating build/bdist.linux-armv7l/wheel/amptk/DB
2021-11-26T22:15:45,118   copying build/lib/amptk/DB/ionxpress_barcodes.fa -> build/bdist.linux-armv7l/wheel/amptk/DB
2021-11-26T22:15:45,123   copying build/lib/amptk/DB/amptk_mock3.fa -> build/bdist.linux-armv7l/wheel/amptk/DB
2021-11-26T22:15:45,128   copying build/lib/amptk/DB/ioncode_barcodes.fa -> build/bdist.linux-armv7l/wheel/amptk/DB
2021-11-26T22:15:45,133   copying build/lib/amptk/DB/amptk_synmock.fa -> build/bdist.linux-armv7l/wheel/amptk/DB
2021-11-26T22:15:45,138   copying build/lib/amptk/DB/amptk_mock1.fa -> build/bdist.linux-armv7l/wheel/amptk/DB
2021-11-26T22:15:45,145   copying build/lib/amptk/DB/amptk_mock2.fa -> build/bdist.linux-armv7l/wheel/amptk/DB
2021-11-26T22:15:45,152   copying build/lib/amptk/amptklib.py -> build/bdist.linux-armv7l/wheel/amptk
2021-11-26T22:15:45,167   copying build/lib/amptk/drop.py -> build/bdist.linux-armv7l/wheel/amptk
2021-11-26T22:15:45,173   copying build/lib/amptk/summarize_taxonomy.py -> build/bdist.linux-armv7l/wheel/amptk
2021-11-26T22:15:45,180   copying build/lib/amptk/barcode_rarify.py -> build/bdist.linux-armv7l/wheel/amptk
2021-11-26T22:15:45,184   copying build/lib/amptk/lulu.py -> build/bdist.linux-armv7l/wheel/amptk
2021-11-26T22:15:45,189   copying build/lib/amptk/process_ion.py -> build/bdist.linux-armv7l/wheel/amptk
2021-11-26T22:15:45,195   copying build/lib/amptk/merge_metadata.py -> build/bdist.linux-armv7l/wheel/amptk
2021-11-26T22:15:45,201   copying build/lib/amptk/process_ont.py -> build/bdist.linux-armv7l/wheel/amptk
2021-11-26T22:15:45,209   copying build/lib/amptk/process_illumina_raw.py -> build/bdist.linux-armv7l/wheel/amptk
2021-11-26T22:15:45,216   copying build/lib/amptk/dada2_pipeline_nofilt.R -> build/bdist.linux-armv7l/wheel/amptk
2021-11-26T22:15:45,221   running install_egg_info
2021-11-26T22:15:45,238   Copying amptk.egg-info to build/bdist.linux-armv7l/wheel/amptk-1.5.4-py3.5.egg-info
2021-11-26T22:15:45,266   running install_scripts
2021-11-26T22:15:45,409   creating build/bdist.linux-armv7l/wheel/amptk-1.5.4.data
2021-11-26T22:15:45,410   creating build/bdist.linux-armv7l/wheel/amptk-1.5.4.data/scripts
2021-11-26T22:15:45,412   copying build/scripts-3.5/amptk_synthetic_mock.py -> build/bdist.linux-armv7l/wheel/amptk-1.5.4.data/scripts
2021-11-26T22:15:45,417   copying build/scripts-3.5/bold2utax.py -> build/bdist.linux-armv7l/wheel/amptk-1.5.4.data/scripts
2021-11-26T22:15:45,422   changing mode of build/bdist.linux-armv7l/wheel/amptk-1.5.4.data/scripts/amptk_synthetic_mock.py to 755
2021-11-26T22:15:45,423   changing mode of build/bdist.linux-armv7l/wheel/amptk-1.5.4.data/scripts/bold2utax.py to 755
2021-11-26T22:15:45,502   creating build/bdist.linux-armv7l/wheel/amptk-1.5.4.dist-info/WHEEL
2021-11-26T22:15:46,027   Building wheel for amptk (setup.py): finished with status 'done'
2021-11-26T22:15:46,034   Created wheel for amptk: filename=amptk-1.5.4-py3-none-any.whl size=199446 sha256=30dea724e9e77667c7f0b80f3312f92af219a0090ab4035ddb839658abb897a4
2021-11-26T22:15:46,035   Stored in directory: /tmp/pip-ephem-wheel-cache-6yvwzn1e/wheels/18/c6/04/7de8a90ac91c426e75069d54a57218edd3c41da0f16d0f6332
2021-11-26T22:15:46,067 Successfully built amptk
2021-11-26T22:15:46,106 Removed build tracker: '/tmp/pip-req-tracker-f3igskuy'