2021-11-28T17:38:08,132 Created temporary directory: /tmp/pip-ephem-wheel-cache-7etvm_lj
2021-11-28T17:38:08,139 Created temporary directory: /tmp/pip-req-tracker-9jwahn2_
2021-11-28T17:38:08,140 Initialized build tracking at /tmp/pip-req-tracker-9jwahn2_
2021-11-28T17:38:08,140 Created build tracker: /tmp/pip-req-tracker-9jwahn2_
2021-11-28T17:38:08,141 Entered build tracker: /tmp/pip-req-tracker-9jwahn2_
2021-11-28T17:38:08,142 Created temporary directory: /tmp/pip-wheel-233jjhy7
2021-11-28T17:38:08,212 Looking in indexes: https://pypi.org/simple, https://www.piwheels.org/simple
2021-11-28T17:38:08,216 2 location(s) to search for versions of kage-genotyper:
2021-11-28T17:38:08,216 * https://pypi.org/simple/kage-genotyper/
2021-11-28T17:38:08,216 * https://www.piwheels.org/simple/kage-genotyper/
2021-11-28T17:38:08,217 Fetching project page and analyzing links: https://pypi.org/simple/kage-genotyper/
2021-11-28T17:38:08,219 Getting page https://pypi.org/simple/kage-genotyper/
2021-11-28T17:38:08,223 Found index url https://pypi.org/simple
2021-11-28T17:38:08,454   Found link https://files.pythonhosted.org/packages/e7/66/016860668992a70bab9c872c5032fbc34e2f9ecc6936b95b4e9a0b0c812b/kage-genotyper-0.0.2.tar.gz#sha256=54ba5a094a15547344c88bd7063e22c9d932bbf7eacfbc8588a83d8b9b42dfc1 (from https://pypi.org/simple/kage-genotyper/), version: 0.0.2
2021-11-28T17:38:08,455   Found link https://files.pythonhosted.org/packages/80/ee/e08c95ccb0c401cfb2049e7271acdcb455196900f035e0700f6229d6c25d/kage-genotyper-0.0.3.tar.gz#sha256=727bf1ff9880dea8e8fe1a2aa5da4d0797fd5f64d75eda6a1ec53be5caa7d9f3 (from https://pypi.org/simple/kage-genotyper/), version: 0.0.3
2021-11-28T17:38:08,456 Fetching project page and analyzing links: https://www.piwheels.org/simple/kage-genotyper/
2021-11-28T17:38:08,457 Getting page https://www.piwheels.org/simple/kage-genotyper/
2021-11-28T17:38:08,459 Found index url https://www.piwheels.org/simple
2021-11-28T17:38:08,715 Given no hashes to check 1 links for project 'kage-genotyper': discarding no candidates
2021-11-28T17:38:08,747 Collecting kage-genotyper==0.0.3
2021-11-28T17:38:08,751   Created temporary directory: /tmp/pip-unpack-vtcbjp7d
2021-11-28T17:38:08,967   Downloading kage-genotyper-0.0.3.tar.gz (32 kB)
2021-11-28T17:38:09,199   Added kage-genotyper==0.0.3 from https://files.pythonhosted.org/packages/80/ee/e08c95ccb0c401cfb2049e7271acdcb455196900f035e0700f6229d6c25d/kage-genotyper-0.0.3.tar.gz#sha256=727bf1ff9880dea8e8fe1a2aa5da4d0797fd5f64d75eda6a1ec53be5caa7d9f3 to build tracker '/tmp/pip-req-tracker-9jwahn2_'
2021-11-28T17:38:09,202     Running setup.py (path:/tmp/pip-wheel-233jjhy7/kage-genotyper_a010662c6ae349e781cd6b747425af2d/setup.py) egg_info for package kage-genotyper
2021-11-28T17:38:09,205     Created temporary directory: /tmp/pip-pip-egg-info-wfy_ztls
2021-11-28T17:38:09,206     Running command python setup.py egg_info
2021-11-28T17:38:11,404     running egg_info
2021-11-28T17:38:11,410     creating /tmp/pip-pip-egg-info-wfy_ztls/kage_genotyper.egg-info
2021-11-28T17:38:11,413     writing entry points to /tmp/pip-pip-egg-info-wfy_ztls/kage_genotyper.egg-info/entry_points.txt
2021-11-28T17:38:11,416     writing dependency_links to /tmp/pip-pip-egg-info-wfy_ztls/kage_genotyper.egg-info/dependency_links.txt
2021-11-28T17:38:11,419     writing /tmp/pip-pip-egg-info-wfy_ztls/kage_genotyper.egg-info/PKG-INFO
2021-11-28T17:38:11,425     writing requirements to /tmp/pip-pip-egg-info-wfy_ztls/kage_genotyper.egg-info/requires.txt
2021-11-28T17:38:11,427     writing top-level names to /tmp/pip-pip-egg-info-wfy_ztls/kage_genotyper.egg-info/top_level.txt
2021-11-28T17:38:11,431     writing manifest file '/tmp/pip-pip-egg-info-wfy_ztls/kage_genotyper.egg-info/SOURCES.txt'
2021-11-28T17:38:11,790     reading manifest file '/tmp/pip-pip-egg-info-wfy_ztls/kage_genotyper.egg-info/SOURCES.txt'
2021-11-28T17:38:11,799     writing manifest file '/tmp/pip-pip-egg-info-wfy_ztls/kage_genotyper.egg-info/SOURCES.txt'
2021-11-28T17:38:11,932   Source in /tmp/pip-wheel-233jjhy7/kage-genotyper_a010662c6ae349e781cd6b747425af2d has version 0.0.3, which satisfies requirement kage-genotyper==0.0.3 from https://files.pythonhosted.org/packages/80/ee/e08c95ccb0c401cfb2049e7271acdcb455196900f035e0700f6229d6c25d/kage-genotyper-0.0.3.tar.gz#sha256=727bf1ff9880dea8e8fe1a2aa5da4d0797fd5f64d75eda6a1ec53be5caa7d9f3
2021-11-28T17:38:11,934   Removed kage-genotyper==0.0.3 from https://files.pythonhosted.org/packages/80/ee/e08c95ccb0c401cfb2049e7271acdcb455196900f035e0700f6229d6c25d/kage-genotyper-0.0.3.tar.gz#sha256=727bf1ff9880dea8e8fe1a2aa5da4d0797fd5f64d75eda6a1ec53be5caa7d9f3 from build tracker '/tmp/pip-req-tracker-9jwahn2_'
2021-11-28T17:38:11,942 Created temporary directory: /tmp/pip-unpack-5noqioju
2021-11-28T17:38:11,943 Building wheels for collected packages: kage-genotyper
2021-11-28T17:38:11,951   Created temporary directory: /tmp/pip-wheel-9xbo01ka
2021-11-28T17:38:11,952   Building wheel for kage-genotyper (setup.py): started
2021-11-28T17:38:11,953   Destination directory: /tmp/pip-wheel-9xbo01ka
2021-11-28T17:38:11,954   Running command /usr/bin/python3 -u -c 'import sys, setuptools, tokenize; sys.argv[0] = '"'"'/tmp/pip-wheel-233jjhy7/kage-genotyper_a010662c6ae349e781cd6b747425af2d/setup.py'"'"'; __file__='"'"'/tmp/pip-wheel-233jjhy7/kage-genotyper_a010662c6ae349e781cd6b747425af2d/setup.py'"'"';f=getattr(tokenize, '"'"'open'"'"', open)(__file__);code=f.read().replace('"'"'\r\n'"'"', '"'"'\n'"'"');f.close();exec(compile(code, __file__, '"'"'exec'"'"'))' bdist_wheel -d /tmp/pip-wheel-9xbo01ka
2021-11-28T17:38:14,165   running bdist_wheel
2021-11-28T17:38:14,182   running build
2021-11-28T17:38:14,183   running build_py
2021-11-28T17:38:14,528   creating build
2021-11-28T17:38:14,529   creating build/lib
2021-11-28T17:38:14,531   creating build/lib/kage
2021-11-28T17:38:14,533   copying kage/bayes_genotyper.py -> build/lib/kage
2021-11-28T17:38:14,538   copying kage/node_counts.py -> build/lib/kage
2021-11-28T17:38:14,541   copying kage/variant_kmer_analyser.py -> build/lib/kage
2021-11-28T17:38:14,545   copying kage/analysis.py -> build/lib/kage
2021-11-28T17:38:14,551   copying kage/letter_sequence_to_numeric.py -> build/lib/kage
2021-11-28T17:38:14,556   copying kage/models.py -> build/lib/kage
2021-11-28T17:38:14,562   copying kage/joint_distribution.py -> build/lib/kage
2021-11-28T17:38:14,567   copying kage/negative_binomial_model.py -> build/lib/kage
2021-11-28T17:38:14,572   copying kage/helper_index_using_duplicate_counts.py -> build/lib/kage
2021-11-28T17:38:14,577   copying kage/combination_model_genotyper.py -> build/lib/kage
2021-11-28T17:38:14,582   copying kage/util.py -> build/lib/kage
2021-11-28T17:38:14,586   copying kage/__init__.py -> build/lib/kage
2021-11-28T17:38:14,589   copying kage/variant_filtering.py -> build/lib/kage
2021-11-28T17:38:14,593   copying kage/genotyper.py -> build/lib/kage
2021-11-28T17:38:14,599   copying kage/helper_index.py -> build/lib/kage
2021-11-28T17:38:14,604   copying kage/node_count_model.py -> build/lib/kage
2021-11-28T17:38:14,609   copying kage/test.py -> build/lib/kage
2021-11-28T17:38:14,613   copying kage/numpy_genotyper.py -> build/lib/kage
2021-11-28T17:38:14,620   copying kage/simulation.py -> build/lib/kage
2021-11-28T17:38:14,627   copying kage/reads.py -> build/lib/kage
2021-11-28T17:38:14,633   copying kage/combomodel.py -> build/lib/kage
2021-11-28T17:38:14,638   copying kage/command_line_interface.py -> build/lib/kage
2021-11-28T17:38:14,646   copying kage/kmers.py -> build/lib/kage
2021-11-28T17:38:14,650   copying kage/reference_kmers.py -> build/lib/kage
2021-11-28T17:38:14,664   installing to build/bdist.linux-armv7l/wheel
2021-11-28T17:38:14,665   running install
2021-11-28T17:38:14,667   running install_lib
2021-11-28T17:38:14,675   creating build/bdist.linux-armv7l
2021-11-28T17:38:14,676   creating build/bdist.linux-armv7l/wheel
2021-11-28T17:38:14,680   creating build/bdist.linux-armv7l/wheel/kage
2021-11-28T17:38:14,682   copying build/lib/kage/bayes_genotyper.py -> build/bdist.linux-armv7l/wheel/kage
2021-11-28T17:38:14,687   copying build/lib/kage/node_counts.py -> build/bdist.linux-armv7l/wheel/kage
2021-11-28T17:38:14,691   copying build/lib/kage/variant_kmer_analyser.py -> build/bdist.linux-armv7l/wheel/kage
2021-11-28T17:38:14,695   copying build/lib/kage/analysis.py -> build/bdist.linux-armv7l/wheel/kage
2021-11-28T17:38:14,702   copying build/lib/kage/letter_sequence_to_numeric.py -> build/bdist.linux-armv7l/wheel/kage
2021-11-28T17:38:14,706   copying build/lib/kage/models.py -> build/bdist.linux-armv7l/wheel/kage
2021-11-28T17:38:14,710   copying build/lib/kage/joint_distribution.py -> build/bdist.linux-armv7l/wheel/kage
2021-11-28T17:38:14,714   copying build/lib/kage/negative_binomial_model.py -> build/bdist.linux-armv7l/wheel/kage
2021-11-28T17:38:14,719   copying build/lib/kage/helper_index_using_duplicate_counts.py -> build/bdist.linux-armv7l/wheel/kage
2021-11-28T17:38:14,724   copying build/lib/kage/combination_model_genotyper.py -> build/bdist.linux-armv7l/wheel/kage
2021-11-28T17:38:14,731   copying build/lib/kage/util.py -> build/bdist.linux-armv7l/wheel/kage
2021-11-28T17:38:14,736   copying build/lib/kage/__init__.py -> build/bdist.linux-armv7l/wheel/kage
2021-11-28T17:38:14,741   copying build/lib/kage/variant_filtering.py -> build/bdist.linux-armv7l/wheel/kage
2021-11-28T17:38:14,746   copying build/lib/kage/genotyper.py -> build/bdist.linux-armv7l/wheel/kage
2021-11-28T17:38:14,752   copying build/lib/kage/helper_index.py -> build/bdist.linux-armv7l/wheel/kage
2021-11-28T17:38:14,757   copying build/lib/kage/node_count_model.py -> build/bdist.linux-armv7l/wheel/kage
2021-11-28T17:38:14,763   copying build/lib/kage/test.py -> build/bdist.linux-armv7l/wheel/kage
2021-11-28T17:38:14,768   copying build/lib/kage/numpy_genotyper.py -> build/bdist.linux-armv7l/wheel/kage
2021-11-28T17:38:14,776   copying build/lib/kage/simulation.py -> build/bdist.linux-armv7l/wheel/kage
2021-11-28T17:38:14,783   copying build/lib/kage/reads.py -> build/bdist.linux-armv7l/wheel/kage
2021-11-28T17:38:14,788   copying build/lib/kage/combomodel.py -> build/bdist.linux-armv7l/wheel/kage
2021-11-28T17:38:14,793   copying build/lib/kage/command_line_interface.py -> build/bdist.linux-armv7l/wheel/kage
2021-11-28T17:38:14,801   copying build/lib/kage/kmers.py -> build/bdist.linux-armv7l/wheel/kage
2021-11-28T17:38:14,806   copying build/lib/kage/reference_kmers.py -> build/bdist.linux-armv7l/wheel/kage
2021-11-28T17:38:14,810   running install_egg_info
2021-11-28T17:38:14,861   running egg_info
2021-11-28T17:38:14,863   writing dependency_links to kage_genotyper.egg-info/dependency_links.txt
2021-11-28T17:38:14,865   writing top-level names to kage_genotyper.egg-info/top_level.txt
2021-11-28T17:38:14,868   writing entry points to kage_genotyper.egg-info/entry_points.txt
2021-11-28T17:38:14,870   writing requirements to kage_genotyper.egg-info/requires.txt
2021-11-28T17:38:14,872   writing kage_genotyper.egg-info/PKG-INFO
2021-11-28T17:38:14,887   reading manifest file 'kage_genotyper.egg-info/SOURCES.txt'
2021-11-28T17:38:14,899   writing manifest file 'kage_genotyper.egg-info/SOURCES.txt'
2021-11-28T17:38:14,903   Copying kage_genotyper.egg-info to build/bdist.linux-armv7l/wheel/kage_genotyper-0.0.3-py3.5.egg-info
2021-11-28T17:38:14,937   running install_scripts
2021-11-28T17:38:15,145   creating build/bdist.linux-armv7l/wheel/kage_genotyper-0.0.3.dist-info/WHEEL
2021-11-28T17:38:15,442   Building wheel for kage-genotyper (setup.py): finished with status 'done'
2021-11-28T17:38:15,447   Created wheel for kage-genotyper: filename=kage_genotyper-0.0.3-py3-none-any.whl size=40454 sha256=7d52b7bdc251d8fa41b2627126137f9c9d6b34e76dcc9d8c85de8d0d42f6bf33
2021-11-28T17:38:15,448   Stored in directory: /tmp/pip-ephem-wheel-cache-7etvm_lj/wheels/b6/d6/45/7c5b6f3b96ab42c55b9491a2d1d29018121f3ef9fd8f43968c
2021-11-28T17:38:15,467 Successfully built kage-genotyper
2021-11-28T17:38:15,479 Removed build tracker: '/tmp/pip-req-tracker-9jwahn2_'