2021-11-29T21:17:13,502 Created temporary directory: /tmp/pip-ephem-wheel-cache-94x6pdii
2021-11-29T21:17:13,506 Created temporary directory: /tmp/pip-req-tracker-5brby56k
2021-11-29T21:17:13,506 Initialized build tracking at /tmp/pip-req-tracker-5brby56k
2021-11-29T21:17:13,506 Created build tracker: /tmp/pip-req-tracker-5brby56k
2021-11-29T21:17:13,507 Entered build tracker: /tmp/pip-req-tracker-5brby56k
2021-11-29T21:17:13,507 Created temporary directory: /tmp/pip-wheel-16m3irg5
2021-11-29T21:17:13,540 Looking in indexes: https://pypi.org/simple, https://www.piwheels.org/simple
2021-11-29T21:17:13,543 2 location(s) to search for versions of forgi:
2021-11-29T21:17:13,543 * https://pypi.org/simple/forgi/
2021-11-29T21:17:13,543 * https://www.piwheels.org/simple/forgi/
2021-11-29T21:17:13,543 Fetching project page and analyzing links: https://pypi.org/simple/forgi/
2021-11-29T21:17:13,544 Getting page https://pypi.org/simple/forgi/
2021-11-29T21:17:13,546 Found index url https://pypi.org/simple
2021-11-29T21:17:13,669   Skipping link: unsupported archive format: .exe: https://files.pythonhosted.org/packages/66/40/1e40afc410037da78b10b08eb1f681c3c4d4514abf774f93f255b9746b90/forgi-0.1.linux-x86_64.exe#sha256=7f26e73fe7e117fe3d495f40498803146a62baf371c0ba905773d4e2558e64a6 (from https://pypi.org/simple/forgi/)
2021-11-29T21:17:13,670   Found link https://files.pythonhosted.org/packages/e7/1a/d38508a857d7ac4c4e75464529fa9834bbaf96078e62d6b93e831c86c0bb/forgi-0.1.tar.gz#sha256=80b89855a29de2b6ecf442454a967f99d682c3eef0f0d5ba9ade8026b3e02e74 (from https://pypi.org/simple/forgi/), version: 0.1
2021-11-29T21:17:13,670   Skipping link: unsupported archive format: .exe: https://files.pythonhosted.org/packages/26/0f/024735a6e6d3077c5bfb5cfc2c398a66d293e4a6192ee88357edbeb66f09/forgi-0.20.linux-x86_64.exe#sha256=b13b5113d360489db7ec2b4feac7926c9b152aa78a372728022d2c96c9d3e598 (from https://pypi.org/simple/forgi/)
2021-11-29T21:17:13,670   Found link https://files.pythonhosted.org/packages/f8/47/5b68cdb14c10ff946b7b53d130dbf644cdcb8663aee0f4a7a467094fa8e9/forgi-0.20.tar.gz#sha256=02bcc321224bd75b257a287a2d5e2ba35135d560ddee2ec1e1e2caa7f3a9b46b (from https://pypi.org/simple/forgi/), version: 0.20
2021-11-29T21:17:13,671   Skipping link: No binaries permitted for forgi: https://files.pythonhosted.org/packages/e4/70/94d2e42b6a8f96fd38e57fe1d3cc05335ac2e7e3b6599223701321356e0e/forgi-1.0-py2.py3-none-any.whl#sha256=d5f6c5bad4475c9a6820816e07d9c2bea6ee364c9f45ea6214cc55e18513e381 (from https://pypi.org/simple/forgi/)
2021-11-29T21:17:13,671   Found link https://files.pythonhosted.org/packages/16/4e/a9b9cb9341a045b4febd75549314df78b7a09e801bdb835b10576b938b9d/forgi-1.0.tar.gz#sha256=f479be4cad782fad3911e37c17dee7e43ff882a674bf26017d3624961f99be65 (from https://pypi.org/simple/forgi/), version: 1.0
2021-11-29T21:17:13,671   Skipping link: No binaries permitted for forgi: https://files.pythonhosted.org/packages/86/f7/812cba6327ac40a33d986b7d698a6d2193e64e7dfcd570abc6b4f86aede5/forgi-1.1-py2.py3-none-any.whl#sha256=a13ed8456dad061d5c5f05609847f58aa713a49993e7923dceadb036dfb92f54 (from https://pypi.org/simple/forgi/)
2021-11-29T21:17:13,671   Found link https://files.pythonhosted.org/packages/61/29/273df63c66c18e8909aff10f66e9406f598f656659894405b1ad10b20654/forgi-1.1.tar.gz#sha256=87519004f2d5232d2c8c3332a3af5001d9f203faa161ff16918632f27c8fcab7 (from https://pypi.org/simple/forgi/), version: 1.1
2021-11-29T21:17:13,672   Found link https://files.pythonhosted.org/packages/69/94/583f97307ee7c68d8b3844c2171dd13d79aa64d38a4f05e7847bd7d98e28/forgi-2.0.1.tar.gz#sha256=4f70a6a3fa8a2533f3526344ce055b3a1ccc93d200ce74a83266705870151094 (from https://pypi.org/simple/forgi/), version: 2.0.1
2021-11-29T21:17:13,672   Found link https://files.pythonhosted.org/packages/ea/95/2fdfc3636ce7957d2581ef9813cd49af123afd718c4bcb41486dadd5babc/forgi-2.0.2.tar.gz#sha256=8cbe0701363993a17bfe61297139ef68d7efb635cb475769482a05740de1643f (from https://pypi.org/simple/forgi/), version: 2.0.2
2021-11-29T21:17:13,672   Found link https://files.pythonhosted.org/packages/61/6d/54b072d5cb0acb992b981772e33d7f7a0dca1f4e7bbc1e5c799fa0eb380d/forgi-2.1.1.tar.gz#sha256=38c3ae6cca7839486c1f526f4f5b36253f318e8b7aa1c21cad1741d8ef55ed5f (from https://pypi.org/simple/forgi/), version: 2.1.1
2021-11-29T21:17:13,672   Found link https://files.pythonhosted.org/packages/bb/50/206944d64095dd07960398f5d350a00c96e7f29689c64ae559292ba7cd20/forgi-2.1.2.tar.gz#sha256=68b3e9666b5c411c7862b5f98ac833b872345343e2d139554493cca2acb5b558 (from https://pypi.org/simple/forgi/), version: 2.1.2
2021-11-29T21:17:13,673 Fetching project page and analyzing links: https://www.piwheels.org/simple/forgi/
2021-11-29T21:17:13,673 Getting page https://www.piwheels.org/simple/forgi/
2021-11-29T21:17:13,674 Found index url https://www.piwheels.org/simple
2021-11-29T21:17:13,850   Skipping link: No binaries permitted for forgi: https://www.piwheels.org/simple/forgi/forgi-0.1-py3-none-any.whl#sha256=74cf37eb8412b8c4a6cc74b32257f5257d71148ad9051c4d9227b689036c1adf (from https://www.piwheels.org/simple/forgi/)
2021-11-29T21:17:13,850   Skipping link: No binaries permitted for forgi: https://www.piwheels.org/simple/forgi/forgi-0.20-py3-none-any.whl#sha256=fe868f38af84d0ed687e6344436930f427f9d154975e10cac9d5ff634a40d16a (from https://www.piwheels.org/simple/forgi/)
2021-11-29T21:17:13,851   Skipping link: No binaries permitted for forgi: https://www.piwheels.org/simple/forgi/forgi-1.0-py2.py3-none-any.whl#sha256=d5f6c5bad4475c9a6820816e07d9c2bea6ee364c9f45ea6214cc55e18513e381 (from https://www.piwheels.org/simple/forgi/)
2021-11-29T21:17:13,851   Skipping link: No binaries permitted for forgi: https://www.piwheels.org/simple/forgi/forgi-1.1-py2.py3-none-any.whl#sha256=a13ed8456dad061d5c5f05609847f58aa713a49993e7923dceadb036dfb92f54 (from https://www.piwheels.org/simple/forgi/)
2021-11-29T21:17:13,851   Skipping link: No binaries permitted for forgi: https://www.piwheels.org/simple/forgi/forgi-2.0.1-cp35-cp35m-linux_armv6l.whl#sha256=261b20a637cc9b006dcb9866174c2d3c4cfa0f0375bd1aa38950c8ccd867dcdd (from https://www.piwheels.org/simple/forgi/)
2021-11-29T21:17:13,851   Skipping link: No binaries permitted for forgi: https://www.piwheels.org/simple/forgi/forgi-2.0.1-cp35-cp35m-linux_armv7l.whl#sha256=261b20a637cc9b006dcb9866174c2d3c4cfa0f0375bd1aa38950c8ccd867dcdd (from https://www.piwheels.org/simple/forgi/)
2021-11-29T21:17:13,852   Skipping link: No binaries permitted for forgi: https://www.piwheels.org/simple/forgi/forgi-2.0.1-cp37-cp37m-linux_armv6l.whl#sha256=5917ef47b38ba9bd489d8299f12812ea7a17d8f10783e0fe4c4f184a2bae3018 (from https://www.piwheels.org/simple/forgi/)
2021-11-29T21:17:13,852   Skipping link: No binaries permitted for forgi: https://www.piwheels.org/simple/forgi/forgi-2.0.1-cp37-cp37m-linux_armv7l.whl#sha256=5917ef47b38ba9bd489d8299f12812ea7a17d8f10783e0fe4c4f184a2bae3018 (from https://www.piwheels.org/simple/forgi/)
2021-11-29T21:17:13,852   Skipping link: No binaries permitted for forgi: https://www.piwheels.org/simple/forgi/forgi-2.0.1-cp39-cp39-linux_armv6l.whl#sha256=e96b8376cebbb6f9a9b49d8d88a027e58f790aada95f37814c7cf8fab8f7a606 (from https://www.piwheels.org/simple/forgi/)
2021-11-29T21:17:13,852   Skipping link: No binaries permitted for forgi: https://www.piwheels.org/simple/forgi/forgi-2.0.1-cp39-cp39-linux_armv7l.whl#sha256=e96b8376cebbb6f9a9b49d8d88a027e58f790aada95f37814c7cf8fab8f7a606 (from https://www.piwheels.org/simple/forgi/)
2021-11-29T21:17:13,853   Skipping link: No binaries permitted for forgi: https://www.piwheels.org/simple/forgi/forgi-2.0.2-cp35-cp35m-linux_armv6l.whl#sha256=c74109d24a39f8eddaffb0933304aefa113c6828a6955ab5db29715f91ea8611 (from https://www.piwheels.org/simple/forgi/)
2021-11-29T21:17:13,853   Skipping link: No binaries permitted for forgi: https://www.piwheels.org/simple/forgi/forgi-2.0.2-cp35-cp35m-linux_armv7l.whl#sha256=c74109d24a39f8eddaffb0933304aefa113c6828a6955ab5db29715f91ea8611 (from https://www.piwheels.org/simple/forgi/)
2021-11-29T21:17:13,853   Skipping link: No binaries permitted for forgi: https://www.piwheels.org/simple/forgi/forgi-2.0.2-cp37-cp37m-linux_armv6l.whl#sha256=f26a2514fd959f03f692bd823ce87ed95de9f2769ddb5386a39afb945d7c7b17 (from https://www.piwheels.org/simple/forgi/)
2021-11-29T21:17:13,853   Skipping link: No binaries permitted for forgi: https://www.piwheels.org/simple/forgi/forgi-2.0.2-cp37-cp37m-linux_armv7l.whl#sha256=f26a2514fd959f03f692bd823ce87ed95de9f2769ddb5386a39afb945d7c7b17 (from https://www.piwheels.org/simple/forgi/)
2021-11-29T21:17:13,854   Skipping link: No binaries permitted for forgi: https://www.piwheels.org/simple/forgi/forgi-2.0.2-cp39-cp39-linux_armv6l.whl#sha256=d547df152ca5cc919761e6a071515f4e97830ffae817158ec9fa1399382d1761 (from https://www.piwheels.org/simple/forgi/)
2021-11-29T21:17:13,854   Skipping link: No binaries permitted for forgi: https://www.piwheels.org/simple/forgi/forgi-2.0.2-cp39-cp39-linux_armv7l.whl#sha256=d547df152ca5cc919761e6a071515f4e97830ffae817158ec9fa1399382d1761 (from https://www.piwheels.org/simple/forgi/)
2021-11-29T21:17:13,854   Skipping link: No binaries permitted for forgi: https://www.piwheels.org/simple/forgi/forgi-2.1.2-cp35-cp35m-linux_armv6l.whl#sha256=c2780f924bfbbbf78b23f481945f17f1232cf043138502c8a7242dd9c04310ba (from https://www.piwheels.org/simple/forgi/)
2021-11-29T21:17:13,854   Skipping link: No binaries permitted for forgi: https://www.piwheels.org/simple/forgi/forgi-2.1.2-cp35-cp35m-linux_armv7l.whl#sha256=c2780f924bfbbbf78b23f481945f17f1232cf043138502c8a7242dd9c04310ba (from https://www.piwheels.org/simple/forgi/)
2021-11-29T21:17:13,855   Skipping link: No binaries permitted for forgi: https://www.piwheels.org/simple/forgi/forgi-2.1.2-cp37-cp37m-linux_armv6l.whl#sha256=09ed6e7a446e5f1d34b68e7af188265e09b6bd4d51dc84c7d0d190a08966fb79 (from https://www.piwheels.org/simple/forgi/)
2021-11-29T21:17:13,855   Skipping link: No binaries permitted for forgi: https://www.piwheels.org/simple/forgi/forgi-2.1.2-cp37-cp37m-linux_armv7l.whl#sha256=09ed6e7a446e5f1d34b68e7af188265e09b6bd4d51dc84c7d0d190a08966fb79 (from https://www.piwheels.org/simple/forgi/)
2021-11-29T21:17:13,855 Skipping link: not a file: https://www.piwheels.org/simple/forgi/
2021-11-29T21:17:13,855 Skipping link: not a file: https://pypi.org/simple/forgi/
2021-11-29T21:17:13,876 Given no hashes to check 1 links for project 'forgi': discarding no candidates
2021-11-29T21:17:13,895 Collecting forgi==2.1.2
2021-11-29T21:17:13,896   Created temporary directory: /tmp/pip-unpack-l3oq7nih
2021-11-29T21:17:13,938   Downloading forgi-2.1.2.tar.gz (26.8 MB)
2021-11-29T21:17:20,629   Added forgi==2.1.2 from https://files.pythonhosted.org/packages/bb/50/206944d64095dd07960398f5d350a00c96e7f29689c64ae559292ba7cd20/forgi-2.1.2.tar.gz#sha256=68b3e9666b5c411c7862b5f98ac833b872345343e2d139554493cca2acb5b558 to build tracker '/tmp/pip-req-tracker-5brby56k'
2021-11-29T21:17:20,630     Running setup.py (path:/tmp/pip-wheel-16m3irg5/forgi_944b718ea8da42d7b94ce66bfd5a2394/setup.py) egg_info for package forgi
2021-11-29T21:17:20,631     Created temporary directory: /tmp/pip-pip-egg-info-_vqpu24y
2021-11-29T21:17:20,632     Running command python setup.py egg_info
2021-11-29T21:17:21,653     fatal: not a git repository (or any of the parent directories): .git
2021-11-29T21:17:22,871     running egg_info
2021-11-29T21:17:22,874     creating /tmp/pip-pip-egg-info-_vqpu24y/forgi.egg-info
2021-11-29T21:17:22,874     writing /tmp/pip-pip-egg-info-_vqpu24y/forgi.egg-info/PKG-INFO
2021-11-29T21:17:22,877     writing dependency_links to /tmp/pip-pip-egg-info-_vqpu24y/forgi.egg-info/dependency_links.txt
2021-11-29T21:17:22,879     writing requirements to /tmp/pip-pip-egg-info-_vqpu24y/forgi.egg-info/requires.txt
2021-11-29T21:17:22,880     writing top-level names to /tmp/pip-pip-egg-info-_vqpu24y/forgi.egg-info/top_level.txt
2021-11-29T21:17:22,882     writing manifest file '/tmp/pip-pip-egg-info-_vqpu24y/forgi.egg-info/SOURCES.txt'
2021-11-29T21:17:22,923     reading manifest file '/tmp/pip-pip-egg-info-_vqpu24y/forgi.egg-info/SOURCES.txt'
2021-11-29T21:17:22,924     reading manifest template 'MANIFEST.in'
2021-11-29T21:17:22,950     adding license file 'LICENSE'
2021-11-29T21:17:22,950     adding license file 'CREDITS'
2021-11-29T21:17:22,957     writing manifest file '/tmp/pip-pip-egg-info-_vqpu24y/forgi.egg-info/SOURCES.txt'
2021-11-29T21:17:23,085   Source in /tmp/pip-wheel-16m3irg5/forgi_944b718ea8da42d7b94ce66bfd5a2394 has version 2.1.2, which satisfies requirement forgi==2.1.2 from https://files.pythonhosted.org/packages/bb/50/206944d64095dd07960398f5d350a00c96e7f29689c64ae559292ba7cd20/forgi-2.1.2.tar.gz#sha256=68b3e9666b5c411c7862b5f98ac833b872345343e2d139554493cca2acb5b558
2021-11-29T21:17:23,086   Removed forgi==2.1.2 from https://files.pythonhosted.org/packages/bb/50/206944d64095dd07960398f5d350a00c96e7f29689c64ae559292ba7cd20/forgi-2.1.2.tar.gz#sha256=68b3e9666b5c411c7862b5f98ac833b872345343e2d139554493cca2acb5b558 from build tracker '/tmp/pip-req-tracker-5brby56k'
2021-11-29T21:17:23,090 Created temporary directory: /tmp/pip-unpack-3tetw8cs
2021-11-29T21:17:23,091 Building wheels for collected packages: forgi
2021-11-29T21:17:23,095   Created temporary directory: /tmp/pip-wheel-lfarzhdn
2021-11-29T21:17:23,095   Building wheel for forgi (setup.py): started
2021-11-29T21:17:23,096   Destination directory: /tmp/pip-wheel-lfarzhdn
2021-11-29T21:17:23,096   Running command /usr/bin/python3 -u -c 'import io, os, sys, setuptools, tokenize; sys.argv[0] = '"'"'/tmp/pip-wheel-16m3irg5/forgi_944b718ea8da42d7b94ce66bfd5a2394/setup.py'"'"'; __file__='"'"'/tmp/pip-wheel-16m3irg5/forgi_944b718ea8da42d7b94ce66bfd5a2394/setup.py'"'"';f = getattr(tokenize, '"'"'open'"'"', open)(__file__) if os.path.exists(__file__) else io.StringIO('"'"'from setuptools import setup; setup()'"'"');code = f.read().replace('"'"'\r\n'"'"', '"'"'\n'"'"');f.close();exec(compile(code, __file__, '"'"'exec'"'"'))' bdist_wheel -d /tmp/pip-wheel-lfarzhdn
2021-11-29T21:17:24,076   fatal: not a git repository (or any of the parent directories): .git
2021-11-29T21:17:25,088   running bdist_wheel
2021-11-29T21:17:25,093   running build
2021-11-29T21:17:25,093   running build_py
2021-11-29T21:17:25,094   creating build
2021-11-29T21:17:25,095   creating build/lib.linux-armv7l-3.9
2021-11-29T21:17:25,096   creating build/lib.linux-armv7l-3.9/forgi
2021-11-29T21:17:25,097   copying forgi/config.py -> build/lib.linux-armv7l-3.9/forgi
2021-11-29T21:17:25,099   copying forgi/__init__.py -> build/lib.linux-armv7l-3.9/forgi
2021-11-29T21:17:25,101   copying forgi/whitelist.py -> build/lib.linux-armv7l-3.9/forgi
2021-11-29T21:17:25,103   creating build/lib.linux-armv7l-3.9/forgi/graph
2021-11-29T21:17:25,104   copying forgi/graph/__init__.py -> build/lib.linux-armv7l-3.9/forgi/graph
2021-11-29T21:17:25,105   copying forgi/graph/transform_graphs.py -> build/lib.linux-armv7l-3.9/forgi/graph
2021-11-29T21:17:25,108   copying forgi/graph/_graph_construction.py -> build/lib.linux-armv7l-3.9/forgi/graph
2021-11-29T21:17:25,110   copying forgi/graph/_basegraph.py -> build/lib.linux-armv7l-3.9/forgi/graph
2021-11-29T21:17:25,113   copying forgi/graph/sequence.py -> build/lib.linux-armv7l-3.9/forgi/graph
2021-11-29T21:17:25,116   copying forgi/graph/residue.py -> build/lib.linux-armv7l-3.9/forgi/graph
2021-11-29T21:17:25,119   copying forgi/graph/bulge_graph.py -> build/lib.linux-armv7l-3.9/forgi/graph
2021-11-29T21:17:25,124   copying forgi/graph/_cofold.py -> build/lib.linux-armv7l-3.9/forgi/graph
2021-11-29T21:17:25,128   creating build/lib.linux-armv7l-3.9/forgi/threedee
2021-11-29T21:17:25,128   copying forgi/threedee/__init__.py -> build/lib.linux-armv7l-3.9/forgi/threedee
2021-11-29T21:17:25,131   creating build/lib.linux-armv7l-3.9/forgi/threedee/model
2021-11-29T21:17:25,132   copying forgi/threedee/model/transform_cg.py -> build/lib.linux-armv7l-3.9/forgi/threedee/model
2021-11-29T21:17:25,134   copying forgi/threedee/model/coarse_grain.py -> build/lib.linux-armv7l-3.9/forgi/threedee/model
2021-11-29T21:17:25,140   copying forgi/threedee/model/_ensemble.py -> build/lib.linux-armv7l-3.9/forgi/threedee/model
2021-11-29T21:17:25,143   copying forgi/threedee/model/similarity.py -> build/lib.linux-armv7l-3.9/forgi/threedee/model
2021-11-29T21:17:25,146   copying forgi/threedee/model/__init__.py -> build/lib.linux-armv7l-3.9/forgi/threedee/model
2021-11-29T21:17:25,147   copying forgi/threedee/model/_ensemble2.py -> build/lib.linux-armv7l-3.9/forgi/threedee/model
2021-11-29T21:17:25,151   copying forgi/threedee/model/descriptors.py -> build/lib.linux-armv7l-3.9/forgi/threedee/model
2021-11-29T21:17:25,153   copying forgi/threedee/model/linecloud.py -> build/lib.linux-armv7l-3.9/forgi/threedee/model
2021-11-29T21:17:25,156   copying forgi/threedee/model/stats.py -> build/lib.linux-armv7l-3.9/forgi/threedee/model
2021-11-29T21:17:25,161   creating build/lib.linux-armv7l-3.9/forgi/utilities
2021-11-29T21:17:25,162   copying forgi/utilities/exceptions.py -> build/lib.linux-armv7l-3.9/forgi/utilities
2021-11-29T21:17:25,164   copying forgi/utilities/numbered_dotbracket.py -> build/lib.linux-armv7l-3.9/forgi/utilities
2021-11-29T21:17:25,166   copying forgi/utilities/stuff.py -> build/lib.linux-armv7l-3.9/forgi/utilities
2021-11-29T21:17:25,169   copying forgi/utilities/debug.py -> build/lib.linux-armv7l-3.9/forgi/utilities
2021-11-29T21:17:25,171   copying forgi/utilities/__init__.py -> build/lib.linux-armv7l-3.9/forgi/utilities
2021-11-29T21:17:25,173   copying forgi/utilities/commandline_utils.py -> build/lib.linux-armv7l-3.9/forgi/utilities
2021-11-29T21:17:25,176   copying forgi/utilities/containers.py -> build/lib.linux-armv7l-3.9/forgi/utilities
2021-11-29T21:17:25,178   copying forgi/utilities/observedDict.py -> build/lib.linux-armv7l-3.9/forgi/utilities
2021-11-29T21:17:25,180   copying forgi/utilities/graph.py -> build/lib.linux-armv7l-3.9/forgi/utilities
2021-11-29T21:17:25,183   creating build/lib.linux-armv7l-3.9/forgi/threedee/utilities
2021-11-29T21:17:25,184   copying forgi/threedee/utilities/virtual_residues.py -> build/lib.linux-armv7l-3.9/forgi/threedee/utilities
2021-11-29T21:17:25,186   copying forgi/threedee/utilities/modified_res.py -> build/lib.linux-armv7l-3.9/forgi/threedee/utilities
2021-11-29T21:17:25,189   copying forgi/threedee/utilities/__init__.py -> build/lib.linux-armv7l-3.9/forgi/threedee/utilities
2021-11-29T21:17:25,191   copying forgi/threedee/utilities/graph_pdb.py -> build/lib.linux-armv7l-3.9/forgi/threedee/utilities
2021-11-29T21:17:25,196   copying forgi/threedee/utilities/my_math.py -> build/lib.linux-armv7l-3.9/forgi/threedee/utilities
2021-11-29T21:17:25,198   copying forgi/threedee/utilities/pdb.py -> build/lib.linux-armv7l-3.9/forgi/threedee/utilities
2021-11-29T21:17:25,202   copying forgi/threedee/utilities/mcannotate.py -> build/lib.linux-armv7l-3.9/forgi/threedee/utilities
2021-11-29T21:17:25,204   copying forgi/threedee/utilities/vector.py -> build/lib.linux-armv7l-3.9/forgi/threedee/utilities
2021-11-29T21:17:25,208   copying forgi/threedee/utilities/_dssr.py -> build/lib.linux-armv7l-3.9/forgi/threedee/utilities
2021-11-29T21:17:25,210   copying forgi/threedee/utilities/average_stem_vres_atom_positions.py -> build/lib.linux-armv7l-3.9/forgi/threedee/utilities
2021-11-29T21:17:25,213   copying forgi/threedee/utilities/modified_res_lookup.py -> build/lib.linux-armv7l-3.9/forgi/threedee/utilities
2021-11-29T21:17:25,219   creating build/lib.linux-armv7l-3.9/forgi/threedee/classification
2021-11-29T21:17:25,220   copying forgi/threedee/classification/__init__.py -> build/lib.linux-armv7l-3.9/forgi/threedee/classification
2021-11-29T21:17:25,222   copying forgi/threedee/classification/contact.py -> build/lib.linux-armv7l-3.9/forgi/threedee/classification
2021-11-29T21:17:25,224   copying forgi/threedee/classification/aminor.py -> build/lib.linux-armv7l-3.9/forgi/threedee/classification
2021-11-29T21:17:25,228   creating build/lib.linux-armv7l-3.9/forgi/threedee/classification/_training
2021-11-29T21:17:25,229   copying forgi/threedee/classification/_training/_parse_utils.py -> build/lib.linux-armv7l-3.9/forgi/threedee/classification/_training
2021-11-29T21:17:25,231   copying forgi/threedee/classification/_training/aminor_training.py -> build/lib.linux-armv7l-3.9/forgi/threedee/classification/_training
2021-11-29T21:17:25,234   copying forgi/threedee/classification/_training/__init__.py -> build/lib.linux-armv7l-3.9/forgi/threedee/classification/_training
2021-11-29T21:17:25,236   copying forgi/threedee/classification/_training/train_aminor.py -> build/lib.linux-armv7l-3.9/forgi/threedee/classification/_training
2021-11-29T21:17:25,239   creating build/lib.linux-armv7l-3.9/forgi/_k2n_standalone
2021-11-29T21:17:25,240   copying forgi/_k2n_standalone/knotted2nested.py -> build/lib.linux-armv7l-3.9/forgi/_k2n_standalone
2021-11-29T21:17:25,243   copying forgi/_k2n_standalone/knots.py -> build/lib.linux-armv7l-3.9/forgi/_k2n_standalone
2021-11-29T21:17:25,247   copying forgi/_k2n_standalone/ct_simple.py -> build/lib.linux-armv7l-3.9/forgi/_k2n_standalone
2021-11-29T21:17:25,250   copying forgi/_k2n_standalone/__init__.py -> build/lib.linux-armv7l-3.9/forgi/_k2n_standalone
2021-11-29T21:17:25,251   copying forgi/_k2n_standalone/dict2d.py -> build/lib.linux-armv7l-3.9/forgi/_k2n_standalone
2021-11-29T21:17:25,255   copying forgi/_k2n_standalone/rna2d.py -> build/lib.linux-armv7l-3.9/forgi/_k2n_standalone
2021-11-29T21:17:25,258   copying forgi/_k2n_standalone/bpseq.py -> build/lib.linux-armv7l-3.9/forgi/_k2n_standalone
2021-11-29T21:17:25,260   copying forgi/_k2n_standalone/output.py -> build/lib.linux-armv7l-3.9/forgi/_k2n_standalone
2021-11-29T21:17:25,263   creating build/lib.linux-armv7l-3.9/forgi/threedee/visual
2021-11-29T21:17:25,264   copying forgi/threedee/visual/__init__.py -> build/lib.linux-armv7l-3.9/forgi/threedee/visual
2021-11-29T21:17:25,265   copying forgi/threedee/visual/pymol.py -> build/lib.linux-armv7l-3.9/forgi/threedee/visual
2021-11-29T21:17:25,269   creating build/lib.linux-armv7l-3.9/forgi/visual
2021-11-29T21:17:25,270   copying forgi/visual/fornac.py -> build/lib.linux-armv7l-3.9/forgi/visual
2021-11-29T21:17:25,273   copying forgi/visual/__init__.py -> build/lib.linux-armv7l-3.9/forgi/visual
2021-11-29T21:17:25,274   copying forgi/visual/mplotlib.py -> build/lib.linux-armv7l-3.9/forgi/visual
2021-11-29T21:17:25,278   creating build/lib.linux-armv7l-3.9/forgi/projection
2021-11-29T21:17:25,279   copying forgi/projection/__init__.py -> build/lib.linux-armv7l-3.9/forgi/projection
2021-11-29T21:17:25,281   copying forgi/projection/projection2d.py -> build/lib.linux-armv7l-3.9/forgi/projection
2021-11-29T21:17:25,284   copying forgi/projection/hausdorff.py -> build/lib.linux-armv7l-3.9/forgi/projection
2021-11-29T21:17:25,299   creating build/lib.linux-armv7l-3.9/forgi/threedee/data
2021-11-29T21:17:25,300   copying forgi/threedee/data/ideal_1_2_3_4.pdb -> build/lib.linux-armv7l-3.9/forgi/threedee/data
2021-11-29T21:17:25,303   copying forgi/threedee/data/ideal_1_37_38_74.spqr.pdb -> build/lib.linux-armv7l-3.9/forgi/threedee/data
2021-11-29T21:17:25,306   copying forgi/threedee/data/ideal_1_33_34_66.spqr.pdb -> build/lib.linux-armv7l-3.9/forgi/threedee/data
2021-11-29T21:17:25,309   copying forgi/threedee/data/ideal_1_22_23_44.spqr.pdb -> build/lib.linux-armv7l-3.9/forgi/threedee/data
2021-11-29T21:17:25,312   copying forgi/threedee/data/ideal_1_12_13_24.pdb -> build/lib.linux-armv7l-3.9/forgi/threedee/data
2021-11-29T21:17:25,316   copying forgi/threedee/data/ideal_1_17_18_34.spqr.pdb -> build/lib.linux-armv7l-3.9/forgi/threedee/data
2021-11-29T21:17:25,319   copying forgi/threedee/data/ideal_1_10_11_20.spqr.pdb -> build/lib.linux-armv7l-3.9/forgi/threedee/data
2021-11-29T21:17:25,322   copying forgi/threedee/data/ideal_1_3_4_6.pdb -> build/lib.linux-armv7l-3.9/forgi/threedee/data
2021-11-29T21:17:25,325   copying forgi/threedee/data/ideal_1_19_20_38.spqr.pdb -> build/lib.linux-armv7l-3.9/forgi/threedee/data
2021-11-29T21:17:25,328   copying forgi/threedee/data/ideal_1_14_15_28.spqr.pdb -> build/lib.linux-armv7l-3.9/forgi/threedee/data
2021-11-29T21:17:25,331   copying forgi/threedee/data/ideal_1_39_40_78.pdb -> build/lib.linux-armv7l-3.9/forgi/threedee/data
2021-11-29T21:17:25,338   copying forgi/threedee/data/ideal_1_38_39_76.pdb -> build/lib.linux-armv7l-3.9/forgi/threedee/data
2021-11-29T21:17:25,345   copying forgi/threedee/data/ideal_1_20_21_40.pdb -> build/lib.linux-armv7l-3.9/forgi/threedee/data
2021-11-29T21:17:25,350   copying forgi/threedee/data/ideal_1_30_31_60.spqr.pdb -> build/lib.linux-armv7l-3.9/forgi/threedee/data
2021-11-29T21:17:25,353   copying forgi/threedee/data/ideal_1_40_41_80.spqr.pdb -> build/lib.linux-armv7l-3.9/forgi/threedee/data
2021-11-29T21:17:25,357   copying forgi/threedee/data/ideal_1_5_6_10.pdb -> build/lib.linux-armv7l-3.9/forgi/threedee/data
2021-11-29T21:17:25,360   copying forgi/threedee/data/ideal_1_4_5_8.spqr.pdb -> build/lib.linux-armv7l-3.9/forgi/threedee/data
2021-11-29T21:17:25,362   copying forgi/threedee/data/ideal_1_31_32_62.spqr.pdb -> build/lib.linux-armv7l-3.9/forgi/threedee/data
2021-11-29T21:17:25,365   copying forgi/threedee/data/ideal_1_27_28_54.spqr.pdb -> build/lib.linux-armv7l-3.9/forgi/threedee/data
2021-11-29T21:17:25,368   copying forgi/threedee/data/ideal_1_33_34_66.pdb -> build/lib.linux-armv7l-3.9/forgi/threedee/data
2021-11-29T21:17:25,373   copying forgi/threedee/data/ideal_1_18_19_36.spqr.pdb -> build/lib.linux-armv7l-3.9/forgi/threedee/data
2021-11-29T21:17:25,376   copying forgi/threedee/data/ideal_1_27_28_54.pdb -> build/lib.linux-armv7l-3.9/forgi/threedee/data
2021-11-29T21:17:25,381   copying forgi/threedee/data/ideal_1_7_8_14.spqr.pdb -> build/lib.linux-armv7l-3.9/forgi/threedee/data
2021-11-29T21:17:25,383   copying forgi/threedee/data/ideal_1_13_14_26.pdb -> build/lib.linux-armv7l-3.9/forgi/threedee/data
2021-11-29T21:17:25,387   copying forgi/threedee/data/ideal_1_18_19_36.pdb -> build/lib.linux-armv7l-3.9/forgi/threedee/data
2021-11-29T21:17:25,391   copying forgi/threedee/data/ideal_1_31_32_62.pdb -> build/lib.linux-armv7l-3.9/forgi/threedee/data
2021-11-29T21:17:25,397   copying forgi/threedee/data/ideal_1_15_16_30.pdb -> build/lib.linux-armv7l-3.9/forgi/threedee/data
2021-11-29T21:17:25,401   copying forgi/threedee/data/ideal_1_28_29_56.pdb -> build/lib.linux-armv7l-3.9/forgi/threedee/data
2021-11-29T21:17:25,406   copying forgi/threedee/data/ideal_1_13_14_26.spqr.pdb -> build/lib.linux-armv7l-3.9/forgi/threedee/data
2021-11-29T21:17:25,409   copying forgi/threedee/data/ideal_1_24_25_48.spqr.pdb -> build/lib.linux-armv7l-3.9/forgi/threedee/data
2021-11-29T21:17:25,413   copying forgi/threedee/data/ideal_1_40_41_80.pdb -> build/lib.linux-armv7l-3.9/forgi/threedee/data
2021-11-29T21:17:25,419   copying forgi/threedee/data/ideal_1_16_17_32.spqr.pdb -> build/lib.linux-armv7l-3.9/forgi/threedee/data
2021-11-29T21:17:25,422   copying forgi/threedee/data/ideal_1_15_16_30.spqr.pdb -> build/lib.linux-armv7l-3.9/forgi/threedee/data
2021-11-29T21:17:25,425   copying forgi/threedee/data/ideal_1_21_22_42.pdb -> build/lib.linux-armv7l-3.9/forgi/threedee/data
2021-11-29T21:17:25,430   copying forgi/threedee/data/ideal_1_7_8_14.pdb -> build/lib.linux-armv7l-3.9/forgi/threedee/data
2021-11-29T21:17:25,434   copying forgi/threedee/data/ideal_1_32_33_64.spqr.pdb -> build/lib.linux-armv7l-3.9/forgi/threedee/data
2021-11-29T21:17:25,438   copying forgi/threedee/data/ideal_1_32_33_64.pdb -> build/lib.linux-armv7l-3.9/forgi/threedee/data
2021-11-29T21:17:25,444   copying forgi/threedee/data/ideal_1_36_37_72.spqr.pdb -> build/lib.linux-armv7l-3.9/forgi/threedee/data
2021-11-29T21:17:25,448   copying forgi/threedee/data/ideal_1_34_35_68.spqr.pdb -> build/lib.linux-armv7l-3.9/forgi/threedee/data
2021-11-29T21:17:25,451   copying forgi/threedee/data/ideal_1_19_20_38.pdb -> build/lib.linux-armv7l-3.9/forgi/threedee/data
2021-11-29T21:17:25,457   copying forgi/threedee/data/ideal_1_8_9_16.spqr.pdb -> build/lib.linux-armv7l-3.9/forgi/threedee/data
2021-11-29T21:17:25,460   copying forgi/threedee/data/ideal_1_16_17_32.pdb -> build/lib.linux-armv7l-3.9/forgi/threedee/data
2021-11-29T21:17:25,465   copying forgi/threedee/data/ideal_1_35_36_70.pdb -> build/lib.linux-armv7l-3.9/forgi/threedee/data
2021-11-29T21:17:25,471   copying forgi/threedee/data/ideal_1_12_13_24.spqr.pdb -> build/lib.linux-armv7l-3.9/forgi/threedee/data
2021-11-29T21:17:25,475   copying forgi/threedee/data/ideal_1_29_30_58.spqr.pdb -> build/lib.linux-armv7l-3.9/forgi/threedee/data
2021-11-29T21:17:25,478   copying forgi/threedee/data/ideal_1_3_4_6.spqr.pdb -> build/lib.linux-armv7l-3.9/forgi/threedee/data
2021-11-29T21:17:25,481   copying forgi/threedee/data/ideal_1_22_23_44.pdb -> build/lib.linux-armv7l-3.9/forgi/threedee/data
2021-11-29T21:17:25,486   copying forgi/threedee/data/ideal_1_38_39_76.spqr.pdb -> build/lib.linux-armv7l-3.9/forgi/threedee/data
2021-11-29T21:17:25,490   copying forgi/threedee/data/ideal_1_21_22_42.spqr.pdb -> build/lib.linux-armv7l-3.9/forgi/threedee/data
2021-11-29T21:17:25,494   copying forgi/threedee/data/ideal_1_26_27_52.spqr.pdb -> build/lib.linux-armv7l-3.9/forgi/threedee/data
2021-11-29T21:17:25,497   copying forgi/threedee/data/ideal_1_36_37_72.pdb -> build/lib.linux-armv7l-3.9/forgi/threedee/data
2021-11-29T21:17:25,504   copying forgi/threedee/data/ideal_1_28_29_56.spqr.pdb -> build/lib.linux-armv7l-3.9/forgi/threedee/data
2021-11-29T21:17:25,507   copying forgi/threedee/data/ideal_1_23_24_46.spqr.pdb -> build/lib.linux-armv7l-3.9/forgi/threedee/data
2021-11-29T21:17:25,511   copying forgi/threedee/data/ideal_1_25_26_50.spqr.pdb -> build/lib.linux-armv7l-3.9/forgi/threedee/data
2021-11-29T21:17:25,514   copying forgi/threedee/data/ideal_1_10_11_20.pdb -> build/lib.linux-armv7l-3.9/forgi/threedee/data
2021-11-29T21:17:25,518   copying forgi/threedee/data/ideal_1_20_21_40.spqr.pdb -> build/lib.linux-armv7l-3.9/forgi/threedee/data
2021-11-29T21:17:25,522   copying forgi/threedee/data/ideal_1_8_9_16.pdb -> build/lib.linux-armv7l-3.9/forgi/threedee/data
2021-11-29T21:17:25,525   copying forgi/threedee/data/ideal_1_14_15_28.pdb -> build/lib.linux-armv7l-3.9/forgi/threedee/data
2021-11-29T21:17:25,530   copying forgi/threedee/data/ideal_1_5_6_10.spqr.pdb -> build/lib.linux-armv7l-3.9/forgi/threedee/data
2021-11-29T21:17:25,533   copying forgi/threedee/data/ideal_1_1_2_2.spqr.pdb -> build/lib.linux-armv7l-3.9/forgi/threedee/data
2021-11-29T21:17:25,536   copying forgi/threedee/data/ideal_1_29_30_58.pdb -> build/lib.linux-armv7l-3.9/forgi/threedee/data
2021-11-29T21:17:25,542   copying forgi/threedee/data/ideal_1_9_10_18.spqr.pdb -> build/lib.linux-armv7l-3.9/forgi/threedee/data
2021-11-29T21:17:25,545   copying forgi/threedee/data/ideal_1_26_27_52.pdb -> build/lib.linux-armv7l-3.9/forgi/threedee/data
2021-11-29T21:17:25,550   copying forgi/threedee/data/ideal_1_6_7_12.pdb -> build/lib.linux-armv7l-3.9/forgi/threedee/data
2021-11-29T21:17:25,554   copying forgi/threedee/data/ideal_1_11_12_22.pdb -> build/lib.linux-armv7l-3.9/forgi/threedee/data
2021-11-29T21:17:25,558   copying forgi/threedee/data/ideal_1_1_2_2.pdb -> build/lib.linux-armv7l-3.9/forgi/threedee/data
2021-11-29T21:17:25,561   copying forgi/threedee/data/ideal_1_11_12_22.spqr.pdb -> build/lib.linux-armv7l-3.9/forgi/threedee/data
2021-11-29T21:17:25,564   copying forgi/threedee/data/ideal_1_24_25_48.pdb -> build/lib.linux-armv7l-3.9/forgi/threedee/data
2021-11-29T21:17:25,570   copying forgi/threedee/data/ideal_1_35_36_70.spqr.pdb -> build/lib.linux-armv7l-3.9/forgi/threedee/data
2021-11-29T21:17:25,573   copying forgi/threedee/data/ideal_1_17_18_34.pdb -> build/lib.linux-armv7l-3.9/forgi/threedee/data
2021-11-29T21:17:25,578   copying forgi/threedee/data/ideal_1_25_26_50.pdb -> build/lib.linux-armv7l-3.9/forgi/threedee/data
2021-11-29T21:17:25,583   copying forgi/threedee/data/ideal_1_9_10_18.pdb -> build/lib.linux-armv7l-3.9/forgi/threedee/data
2021-11-29T21:17:25,588   copying forgi/threedee/data/ideal_1_6_7_12.spqr.pdb -> build/lib.linux-armv7l-3.9/forgi/threedee/data
2021-11-29T21:17:25,590   copying forgi/threedee/data/ideal_1_30_31_60.pdb -> build/lib.linux-armv7l-3.9/forgi/threedee/data
2021-11-29T21:17:25,596   copying forgi/threedee/data/ideal_1_39_40_78.spqr.pdb -> build/lib.linux-armv7l-3.9/forgi/threedee/data
2021-11-29T21:17:25,600   copying forgi/threedee/data/ideal_1_23_24_46.pdb -> build/lib.linux-armv7l-3.9/forgi/threedee/data
2021-11-29T21:17:25,605   copying forgi/threedee/data/ideal_1_4_5_8.pdb -> build/lib.linux-armv7l-3.9/forgi/threedee/data
2021-11-29T21:17:25,609   copying forgi/threedee/data/ideal_1_37_38_74.pdb -> build/lib.linux-armv7l-3.9/forgi/threedee/data
2021-11-29T21:17:25,614   copying forgi/threedee/data/ideal_1_34_35_68.pdb -> build/lib.linux-armv7l-3.9/forgi/threedee/data
2021-11-29T21:17:25,620   copying forgi/threedee/data/ideal_1_2_3_4.spqr.pdb -> build/lib.linux-armv7l-3.9/forgi/threedee/data
2021-11-29T21:17:25,623   copying forgi/threedee/data/average_atom_positions.json -> build/lib.linux-armv7l-3.9/forgi/threedee/data
2021-11-29T21:17:26,754   copying forgi/threedee/data/aminor_geometries.csv -> build/lib.linux-armv7l-3.9/forgi/threedee/data
2021-11-29T21:17:27,149   copying forgi/threedee/data/aminor_params.json -> build/lib.linux-armv7l-3.9/forgi/threedee/data
2021-11-29T21:17:27,159   running build_ext
2021-11-29T21:17:27,165   building 'forgi.threedee.utilities.cytvec' extension
2021-11-29T21:17:27,166   creating build/temp.linux-armv7l-3.9
2021-11-29T21:17:27,167   creating build/temp.linux-armv7l-3.9/forgi
2021-11-29T21:17:27,168   creating build/temp.linux-armv7l-3.9/forgi/threedee
2021-11-29T21:17:27,169   creating build/temp.linux-armv7l-3.9/forgi/threedee/utilities
2021-11-29T21:17:27,170   arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -ffile-prefix-map=/python3.9-3.9.2=. -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -g -ffile-prefix-map=/python3.9-3.9.2=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -I./forgi/threedee/utilities -I/usr/local/lib/python3.9/dist-packages/numpy/core/include -I/usr/include/python3.9 -c forgi/threedee/utilities/broken_ml_core.cpp -o build/temp.linux-armv7l-3.9/forgi/threedee/utilities/broken_ml_core.o -O3 -std=c++11
2021-11-29T21:17:29,227   arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -ffile-prefix-map=/python3.9-3.9.2=. -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -g -ffile-prefix-map=/python3.9-3.9.2=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -I./forgi/threedee/utilities -I/usr/local/lib/python3.9/dist-packages/numpy/core/include -I/usr/include/python3.9 -c forgi/threedee/utilities/cytvec.cpp -o build/temp.linux-armv7l-3.9/forgi/threedee/utilities/cytvec.o -O3 -std=c++11
2021-11-29T21:17:29,520   In file included from /usr/local/lib/python3.9/dist-packages/numpy/core/include/numpy/ndarraytypes.h:1969,
2021-11-29T21:17:29,520                    from /usr/local/lib/python3.9/dist-packages/numpy/core/include/numpy/ndarrayobject.h:12,
2021-11-29T21:17:29,520                    from /usr/local/lib/python3.9/dist-packages/numpy/core/include/numpy/arrayobject.h:4,
2021-11-29T21:17:29,520                    from forgi/threedee/utilities/cytvec.cpp:664:
2021-11-29T21:17:29,520   /usr/local/lib/python3.9/dist-packages/numpy/core/include/numpy/npy_1_7_deprecated_api.h:17:2: warning: #warning "Using deprecated NumPy API, disable it with " "#define NPY_NO_DEPRECATED_API NPY_1_7_API_VERSION" [-Wcpp]
2021-11-29T21:17:29,520      17 | #warning "Using deprecated NumPy API, disable it with " \
2021-11-29T21:17:29,521         |  ^~~~~~~
2021-11-29T21:17:53,431   arm-linux-gnueabihf-g++ -pthread -shared -Wl,-O1 -Wl,-Bsymbolic-functions -Wl,-z,relro -g -fwrapv -O2 -Wl,-z,relro -g -fwrapv -O2 -g -ffile-prefix-map=/python3.9-3.9.2=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 build/temp.linux-armv7l-3.9/forgi/threedee/utilities/broken_ml_core.o build/temp.linux-armv7l-3.9/forgi/threedee/utilities/cytvec.o -o build/lib.linux-armv7l-3.9/forgi/threedee/utilities/cytvec.cpython-39-arm-linux-gnueabihf.so
2021-11-29T21:17:53,790   running build_scripts
2021-11-29T21:17:53,792   creating build/scripts-3.9
2021-11-29T21:17:53,793   copying and adjusting examples/rnaConvert.py -> build/scripts-3.9
2021-11-29T21:17:53,796   copying and adjusting examples/describe_cg.py -> build/scripts-3.9
2021-11-29T21:17:53,799   copying and adjusting examples/compare_RNA.py -> build/scripts-3.9
2021-11-29T21:17:53,801   copying and adjusting examples/visualize_rna.py -> build/scripts-3.9
2021-11-29T21:17:53,804   copying and adjusting examples/pseudoknot_analyzer.py -> build/scripts-3.9
2021-11-29T21:17:53,808   copying and adjusting examples/forgi_config.py -> build/scripts-3.9
2021-11-29T21:17:53,809   changing mode of build/scripts-3.9/rnaConvert.py from 644 to 755
2021-11-29T21:17:53,810   changing mode of build/scripts-3.9/describe_cg.py from 644 to 755
2021-11-29T21:17:53,811   changing mode of build/scripts-3.9/compare_RNA.py from 644 to 755
2021-11-29T21:17:53,811   changing mode of build/scripts-3.9/visualize_rna.py from 644 to 755
2021-11-29T21:17:53,812   changing mode of build/scripts-3.9/pseudoknot_analyzer.py from 644 to 755
2021-11-29T21:17:53,812   changing mode of build/scripts-3.9/forgi_config.py from 644 to 755
2021-11-29T21:17:53,821   installing to build/bdist.linux-armv7l/wheel
2021-11-29T21:17:53,821   running install
2021-11-29T21:17:53,823   running install_lib
2021-11-29T21:17:53,828   creating build/bdist.linux-armv7l
2021-11-29T21:17:53,829   creating build/bdist.linux-armv7l/wheel
2021-11-29T21:17:53,830   creating build/bdist.linux-armv7l/wheel/forgi
2021-11-29T21:17:53,833   copying build/lib.linux-armv7l-3.9/forgi/config.py -> build/bdist.linux-armv7l/wheel/forgi
2021-11-29T21:17:53,836   creating build/bdist.linux-armv7l/wheel/forgi/graph
2021-11-29T21:17:53,837   copying build/lib.linux-armv7l-3.9/forgi/graph/__init__.py -> build/bdist.linux-armv7l/wheel/forgi/graph
2021-11-29T21:17:53,839   copying build/lib.linux-armv7l-3.9/forgi/graph/transform_graphs.py -> build/bdist.linux-armv7l/wheel/forgi/graph
2021-11-29T21:17:53,841   copying build/lib.linux-armv7l-3.9/forgi/graph/_graph_construction.py -> build/bdist.linux-armv7l/wheel/forgi/graph
2021-11-29T21:17:53,844   copying build/lib.linux-armv7l-3.9/forgi/graph/_basegraph.py -> build/bdist.linux-armv7l/wheel/forgi/graph
2021-11-29T21:17:53,847   copying build/lib.linux-armv7l-3.9/forgi/graph/sequence.py -> build/bdist.linux-armv7l/wheel/forgi/graph
2021-11-29T21:17:53,851   copying build/lib.linux-armv7l-3.9/forgi/graph/residue.py -> build/bdist.linux-armv7l/wheel/forgi/graph
2021-11-29T21:17:53,853   copying build/lib.linux-armv7l-3.9/forgi/graph/bulge_graph.py -> build/bdist.linux-armv7l/wheel/forgi/graph
2021-11-29T21:17:53,858   copying build/lib.linux-armv7l-3.9/forgi/graph/_cofold.py -> build/bdist.linux-armv7l/wheel/forgi/graph
2021-11-29T21:17:53,862   creating build/bdist.linux-armv7l/wheel/forgi/utilities
2021-11-29T21:17:53,863   copying build/lib.linux-armv7l-3.9/forgi/utilities/exceptions.py -> build/bdist.linux-armv7l/wheel/forgi/utilities
2021-11-29T21:17:53,865   copying build/lib.linux-armv7l-3.9/forgi/utilities/numbered_dotbracket.py -> build/bdist.linux-armv7l/wheel/forgi/utilities
2021-11-29T21:17:53,868   copying build/lib.linux-armv7l-3.9/forgi/utilities/stuff.py -> build/bdist.linux-armv7l/wheel/forgi/utilities
2021-11-29T21:17:53,871   copying build/lib.linux-armv7l-3.9/forgi/utilities/debug.py -> build/bdist.linux-armv7l/wheel/forgi/utilities
2021-11-29T21:17:53,873   copying build/lib.linux-armv7l-3.9/forgi/utilities/__init__.py -> build/bdist.linux-armv7l/wheel/forgi/utilities
2021-11-29T21:17:53,875   copying build/lib.linux-armv7l-3.9/forgi/utilities/commandline_utils.py -> build/bdist.linux-armv7l/wheel/forgi/utilities
2021-11-29T21:17:53,878   copying build/lib.linux-armv7l-3.9/forgi/utilities/containers.py -> build/bdist.linux-armv7l/wheel/forgi/utilities
2021-11-29T21:17:53,880   copying build/lib.linux-armv7l-3.9/forgi/utilities/observedDict.py -> build/bdist.linux-armv7l/wheel/forgi/utilities
2021-11-29T21:17:53,882   copying build/lib.linux-armv7l-3.9/forgi/utilities/graph.py -> build/bdist.linux-armv7l/wheel/forgi/utilities
2021-11-29T21:17:53,885   creating build/bdist.linux-armv7l/wheel/forgi/visual
2021-11-29T21:17:53,886   copying build/lib.linux-armv7l-3.9/forgi/visual/fornac.py -> build/bdist.linux-armv7l/wheel/forgi/visual
2021-11-29T21:17:53,889   copying build/lib.linux-armv7l-3.9/forgi/visual/__init__.py -> build/bdist.linux-armv7l/wheel/forgi/visual
2021-11-29T21:17:53,891   copying build/lib.linux-armv7l-3.9/forgi/visual/mplotlib.py -> build/bdist.linux-armv7l/wheel/forgi/visual
2021-11-29T21:17:53,894   creating build/bdist.linux-armv7l/wheel/forgi/_k2n_standalone
2021-11-29T21:17:53,895   copying build/lib.linux-armv7l-3.9/forgi/_k2n_standalone/knotted2nested.py -> build/bdist.linux-armv7l/wheel/forgi/_k2n_standalone
2021-11-29T21:17:53,899   copying build/lib.linux-armv7l-3.9/forgi/_k2n_standalone/knots.py -> build/bdist.linux-armv7l/wheel/forgi/_k2n_standalone
2021-11-29T21:17:53,903   copying build/lib.linux-armv7l-3.9/forgi/_k2n_standalone/ct_simple.py -> build/bdist.linux-armv7l/wheel/forgi/_k2n_standalone
2021-11-29T21:17:53,905   copying build/lib.linux-armv7l-3.9/forgi/_k2n_standalone/__init__.py -> build/bdist.linux-armv7l/wheel/forgi/_k2n_standalone
2021-11-29T21:17:53,907   copying build/lib.linux-armv7l-3.9/forgi/_k2n_standalone/dict2d.py -> build/bdist.linux-armv7l/wheel/forgi/_k2n_standalone
2021-11-29T21:17:53,910   copying build/lib.linux-armv7l-3.9/forgi/_k2n_standalone/rna2d.py -> build/bdist.linux-armv7l/wheel/forgi/_k2n_standalone
2021-11-29T21:17:53,913   copying build/lib.linux-armv7l-3.9/forgi/_k2n_standalone/bpseq.py -> build/bdist.linux-armv7l/wheel/forgi/_k2n_standalone
2021-11-29T21:17:53,916   copying build/lib.linux-armv7l-3.9/forgi/_k2n_standalone/output.py -> build/bdist.linux-armv7l/wheel/forgi/_k2n_standalone
2021-11-29T21:17:53,918   copying build/lib.linux-armv7l-3.9/forgi/__init__.py -> build/bdist.linux-armv7l/wheel/forgi
2021-11-29T21:17:53,921   creating build/bdist.linux-armv7l/wheel/forgi/threedee
2021-11-29T21:17:53,924   creating build/bdist.linux-armv7l/wheel/forgi/threedee/data
2021-11-29T21:17:53,925   copying build/lib.linux-armv7l-3.9/forgi/threedee/data/ideal_1_2_3_4.pdb -> build/bdist.linux-armv7l/wheel/forgi/threedee/data
2021-11-29T21:17:53,930   copying build/lib.linux-armv7l-3.9/forgi/threedee/data/ideal_1_37_38_74.spqr.pdb -> build/bdist.linux-armv7l/wheel/forgi/threedee/data
2021-11-29T21:17:53,932   copying build/lib.linux-armv7l-3.9/forgi/threedee/data/ideal_1_33_34_66.spqr.pdb -> build/bdist.linux-armv7l/wheel/forgi/threedee/data
2021-11-29T21:17:53,935   copying build/lib.linux-armv7l-3.9/forgi/threedee/data/ideal_1_22_23_44.spqr.pdb -> build/bdist.linux-armv7l/wheel/forgi/threedee/data
2021-11-29T21:17:53,938   copying build/lib.linux-armv7l-3.9/forgi/threedee/data/ideal_1_12_13_24.pdb -> build/bdist.linux-armv7l/wheel/forgi/threedee/data
2021-11-29T21:17:53,941   copying build/lib.linux-armv7l-3.9/forgi/threedee/data/ideal_1_17_18_34.spqr.pdb -> build/bdist.linux-armv7l/wheel/forgi/threedee/data
2021-11-29T21:17:53,944   copying build/lib.linux-armv7l-3.9/forgi/threedee/data/ideal_1_10_11_20.spqr.pdb -> build/bdist.linux-armv7l/wheel/forgi/threedee/data
2021-11-29T21:17:53,946   copying build/lib.linux-armv7l-3.9/forgi/threedee/data/ideal_1_3_4_6.pdb -> build/bdist.linux-armv7l/wheel/forgi/threedee/data
2021-11-29T21:17:53,949   copying build/lib.linux-armv7l-3.9/forgi/threedee/data/ideal_1_19_20_38.spqr.pdb -> build/bdist.linux-armv7l/wheel/forgi/threedee/data
2021-11-29T21:17:53,951   copying build/lib.linux-armv7l-3.9/forgi/threedee/data/ideal_1_14_15_28.spqr.pdb -> build/bdist.linux-armv7l/wheel/forgi/threedee/data
2021-11-29T21:17:53,953   copying build/lib.linux-armv7l-3.9/forgi/threedee/data/ideal_1_39_40_78.pdb -> build/bdist.linux-armv7l/wheel/forgi/threedee/data
2021-11-29T21:17:53,960   copying build/lib.linux-armv7l-3.9/forgi/threedee/data/ideal_1_38_39_76.pdb -> build/bdist.linux-armv7l/wheel/forgi/threedee/data
2021-11-29T21:17:53,967   copying build/lib.linux-armv7l-3.9/forgi/threedee/data/ideal_1_20_21_40.pdb -> build/bdist.linux-armv7l/wheel/forgi/threedee/data
2021-11-29T21:17:53,972   copying build/lib.linux-armv7l-3.9/forgi/threedee/data/ideal_1_30_31_60.spqr.pdb -> build/bdist.linux-armv7l/wheel/forgi/threedee/data
2021-11-29T21:17:53,974   copying build/lib.linux-armv7l-3.9/forgi/threedee/data/ideal_1_40_41_80.spqr.pdb -> build/bdist.linux-armv7l/wheel/forgi/threedee/data
2021-11-29T21:17:53,978   copying build/lib.linux-armv7l-3.9/forgi/threedee/data/ideal_1_5_6_10.pdb -> build/bdist.linux-armv7l/wheel/forgi/threedee/data
2021-11-29T21:17:53,980   copying build/lib.linux-armv7l-3.9/forgi/threedee/data/ideal_1_4_5_8.spqr.pdb -> build/bdist.linux-armv7l/wheel/forgi/threedee/data
2021-11-29T21:17:53,982   copying build/lib.linux-armv7l-3.9/forgi/threedee/data/ideal_1_31_32_62.spqr.pdb -> build/bdist.linux-armv7l/wheel/forgi/threedee/data
2021-11-29T21:17:53,985   copying build/lib.linux-armv7l-3.9/forgi/threedee/data/ideal_1_27_28_54.spqr.pdb -> build/bdist.linux-armv7l/wheel/forgi/threedee/data
2021-11-29T21:17:53,987   copying build/lib.linux-armv7l-3.9/forgi/threedee/data/ideal_1_33_34_66.pdb -> build/bdist.linux-armv7l/wheel/forgi/threedee/data
2021-11-29T21:17:53,992   copying build/lib.linux-armv7l-3.9/forgi/threedee/data/ideal_1_18_19_36.spqr.pdb -> build/bdist.linux-armv7l/wheel/forgi/threedee/data
2021-11-29T21:17:53,995   copying build/lib.linux-armv7l-3.9/forgi/threedee/data/ideal_1_27_28_54.pdb -> build/bdist.linux-armv7l/wheel/forgi/threedee/data
2021-11-29T21:17:53,999   copying build/lib.linux-armv7l-3.9/forgi/threedee/data/ideal_1_7_8_14.spqr.pdb -> build/bdist.linux-armv7l/wheel/forgi/threedee/data
2021-11-29T21:17:54,001   copying build/lib.linux-armv7l-3.9/forgi/threedee/data/ideal_1_13_14_26.pdb -> build/bdist.linux-armv7l/wheel/forgi/threedee/data
2021-11-29T21:17:54,004   copying build/lib.linux-armv7l-3.9/forgi/threedee/data/ideal_1_18_19_36.pdb -> build/bdist.linux-armv7l/wheel/forgi/threedee/data
2021-11-29T21:17:54,007   copying build/lib.linux-armv7l-3.9/forgi/threedee/data/ideal_1_31_32_62.pdb -> build/bdist.linux-armv7l/wheel/forgi/threedee/data
2021-11-29T21:17:54,012   copying build/lib.linux-armv7l-3.9/forgi/threedee/data/ideal_1_15_16_30.pdb -> build/bdist.linux-armv7l/wheel/forgi/threedee/data
2021-11-29T21:17:54,015   copying build/lib.linux-armv7l-3.9/forgi/threedee/data/ideal_1_28_29_56.pdb -> build/bdist.linux-armv7l/wheel/forgi/threedee/data
2021-11-29T21:17:54,020   copying build/lib.linux-armv7l-3.9/forgi/threedee/data/ideal_1_13_14_26.spqr.pdb -> build/bdist.linux-armv7l/wheel/forgi/threedee/data
2021-11-29T21:17:54,022   copying build/lib.linux-armv7l-3.9/forgi/threedee/data/average_atom_positions.json -> build/bdist.linux-armv7l/wheel/forgi/threedee/data
2021-11-29T21:17:56,465   copying build/lib.linux-armv7l-3.9/forgi/threedee/data/ideal_1_24_25_48.spqr.pdb -> build/bdist.linux-armv7l/wheel/forgi/threedee/data
2021-11-29T21:17:56,468   copying build/lib.linux-armv7l-3.9/forgi/threedee/data/ideal_1_40_41_80.pdb -> build/bdist.linux-armv7l/wheel/forgi/threedee/data
2021-11-29T21:17:56,473   copying build/lib.linux-armv7l-3.9/forgi/threedee/data/ideal_1_16_17_32.spqr.pdb -> build/bdist.linux-armv7l/wheel/forgi/threedee/data
2021-11-29T21:17:56,475   copying build/lib.linux-armv7l-3.9/forgi/threedee/data/ideal_1_15_16_30.spqr.pdb -> build/bdist.linux-armv7l/wheel/forgi/threedee/data
2021-11-29T21:17:56,477   copying build/lib.linux-armv7l-3.9/forgi/threedee/data/ideal_1_21_22_42.pdb -> build/bdist.linux-armv7l/wheel/forgi/threedee/data
2021-11-29T21:17:56,481   copying build/lib.linux-armv7l-3.9/forgi/threedee/data/ideal_1_7_8_14.pdb -> build/bdist.linux-armv7l/wheel/forgi/threedee/data
2021-11-29T21:17:56,483   copying build/lib.linux-armv7l-3.9/forgi/threedee/data/ideal_1_32_33_64.spqr.pdb -> build/bdist.linux-armv7l/wheel/forgi/threedee/data
2021-11-29T21:17:56,486   copying build/lib.linux-armv7l-3.9/forgi/threedee/data/ideal_1_32_33_64.pdb -> build/bdist.linux-armv7l/wheel/forgi/threedee/data
2021-11-29T21:17:56,490   copying build/lib.linux-armv7l-3.9/forgi/threedee/data/ideal_1_36_37_72.spqr.pdb -> build/bdist.linux-armv7l/wheel/forgi/threedee/data
2021-11-29T21:17:56,493   copying build/lib.linux-armv7l-3.9/forgi/threedee/data/ideal_1_34_35_68.spqr.pdb -> build/bdist.linux-armv7l/wheel/forgi/threedee/data
2021-11-29T21:17:56,496   copying build/lib.linux-armv7l-3.9/forgi/threedee/data/ideal_1_19_20_38.pdb -> build/bdist.linux-armv7l/wheel/forgi/threedee/data
2021-11-29T21:17:56,500   copying build/lib.linux-armv7l-3.9/forgi/threedee/data/aminor_params.json -> build/bdist.linux-armv7l/wheel/forgi/threedee/data
2021-11-29T21:17:56,501   copying build/lib.linux-armv7l-3.9/forgi/threedee/data/ideal_1_8_9_16.spqr.pdb -> build/bdist.linux-armv7l/wheel/forgi/threedee/data
2021-11-29T21:17:56,503   copying build/lib.linux-armv7l-3.9/forgi/threedee/data/ideal_1_16_17_32.pdb -> build/bdist.linux-armv7l/wheel/forgi/threedee/data
2021-11-29T21:17:56,507   copying build/lib.linux-armv7l-3.9/forgi/threedee/data/ideal_1_35_36_70.pdb -> build/bdist.linux-armv7l/wheel/forgi/threedee/data
2021-11-29T21:17:56,512   copying build/lib.linux-armv7l-3.9/forgi/threedee/data/ideal_1_12_13_24.spqr.pdb -> build/bdist.linux-armv7l/wheel/forgi/threedee/data
2021-11-29T21:17:56,515   copying build/lib.linux-armv7l-3.9/forgi/threedee/data/ideal_1_29_30_58.spqr.pdb -> build/bdist.linux-armv7l/wheel/forgi/threedee/data
2021-11-29T21:17:56,517   copying build/lib.linux-armv7l-3.9/forgi/threedee/data/ideal_1_3_4_6.spqr.pdb -> build/bdist.linux-armv7l/wheel/forgi/threedee/data
2021-11-29T21:17:56,519   copying build/lib.linux-armv7l-3.9/forgi/threedee/data/ideal_1_22_23_44.pdb -> build/bdist.linux-armv7l/wheel/forgi/threedee/data
2021-11-29T21:17:56,524   copying build/lib.linux-armv7l-3.9/forgi/threedee/data/ideal_1_38_39_76.spqr.pdb -> build/bdist.linux-armv7l/wheel/forgi/threedee/data
2021-11-29T21:17:56,526   copying build/lib.linux-armv7l-3.9/forgi/threedee/data/ideal_1_21_22_42.spqr.pdb -> build/bdist.linux-armv7l/wheel/forgi/threedee/data
2021-11-29T21:17:56,529   copying build/lib.linux-armv7l-3.9/forgi/threedee/data/ideal_1_26_27_52.spqr.pdb -> build/bdist.linux-armv7l/wheel/forgi/threedee/data
2021-11-29T21:17:56,531   copying build/lib.linux-armv7l-3.9/forgi/threedee/data/ideal_1_36_37_72.pdb -> build/bdist.linux-armv7l/wheel/forgi/threedee/data
2021-11-29T21:17:56,537   copying build/lib.linux-armv7l-3.9/forgi/threedee/data/ideal_1_28_29_56.spqr.pdb -> build/bdist.linux-armv7l/wheel/forgi/threedee/data
2021-11-29T21:17:56,539   copying build/lib.linux-armv7l-3.9/forgi/threedee/data/ideal_1_23_24_46.spqr.pdb -> build/bdist.linux-armv7l/wheel/forgi/threedee/data
2021-11-29T21:17:56,542   copying build/lib.linux-armv7l-3.9/forgi/threedee/data/ideal_1_25_26_50.spqr.pdb -> build/bdist.linux-armv7l/wheel/forgi/threedee/data
2021-11-29T21:17:56,545   copying build/lib.linux-armv7l-3.9/forgi/threedee/data/ideal_1_10_11_20.pdb -> build/bdist.linux-armv7l/wheel/forgi/threedee/data
2021-11-29T21:17:56,548   copying build/lib.linux-armv7l-3.9/forgi/threedee/data/ideal_1_20_21_40.spqr.pdb -> build/bdist.linux-armv7l/wheel/forgi/threedee/data
2021-11-29T21:17:56,550   copying build/lib.linux-armv7l-3.9/forgi/threedee/data/ideal_1_8_9_16.pdb -> build/bdist.linux-armv7l/wheel/forgi/threedee/data
2021-11-29T21:17:56,553   copying build/lib.linux-armv7l-3.9/forgi/threedee/data/ideal_1_14_15_28.pdb -> build/bdist.linux-armv7l/wheel/forgi/threedee/data
2021-11-29T21:17:56,557   copying build/lib.linux-armv7l-3.9/forgi/threedee/data/ideal_1_5_6_10.spqr.pdb -> build/bdist.linux-armv7l/wheel/forgi/threedee/data
2021-11-29T21:17:56,559   copying build/lib.linux-armv7l-3.9/forgi/threedee/data/ideal_1_1_2_2.spqr.pdb -> build/bdist.linux-armv7l/wheel/forgi/threedee/data
2021-11-29T21:17:56,561   copying build/lib.linux-armv7l-3.9/forgi/threedee/data/ideal_1_29_30_58.pdb -> build/bdist.linux-armv7l/wheel/forgi/threedee/data
2021-11-29T21:17:56,566   copying build/lib.linux-armv7l-3.9/forgi/threedee/data/ideal_1_9_10_18.spqr.pdb -> build/bdist.linux-armv7l/wheel/forgi/threedee/data
2021-11-29T21:17:56,568   copying build/lib.linux-armv7l-3.9/forgi/threedee/data/ideal_1_26_27_52.pdb -> build/bdist.linux-armv7l/wheel/forgi/threedee/data
2021-11-29T21:17:56,572   copying build/lib.linux-armv7l-3.9/forgi/threedee/data/ideal_1_6_7_12.pdb -> build/bdist.linux-armv7l/wheel/forgi/threedee/data
2021-11-29T21:17:56,575   copying build/lib.linux-armv7l-3.9/forgi/threedee/data/ideal_1_11_12_22.pdb -> build/bdist.linux-armv7l/wheel/forgi/threedee/data
2021-11-29T21:17:56,578   copying build/lib.linux-armv7l-3.9/forgi/threedee/data/ideal_1_1_2_2.pdb -> build/bdist.linux-armv7l/wheel/forgi/threedee/data
2021-11-29T21:17:56,580   copying build/lib.linux-armv7l-3.9/forgi/threedee/data/ideal_1_11_12_22.spqr.pdb -> build/bdist.linux-armv7l/wheel/forgi/threedee/data
2021-11-29T21:17:56,583   copying build/lib.linux-armv7l-3.9/forgi/threedee/data/ideal_1_24_25_48.pdb -> build/bdist.linux-armv7l/wheel/forgi/threedee/data
2021-11-29T21:17:56,587   copying build/lib.linux-armv7l-3.9/forgi/threedee/data/ideal_1_35_36_70.spqr.pdb -> build/bdist.linux-armv7l/wheel/forgi/threedee/data
2021-11-29T21:17:56,589   copying build/lib.linux-armv7l-3.9/forgi/threedee/data/ideal_1_17_18_34.pdb -> build/bdist.linux-armv7l/wheel/forgi/threedee/data
2021-11-29T21:17:56,593   copying build/lib.linux-armv7l-3.9/forgi/threedee/data/ideal_1_25_26_50.pdb -> build/bdist.linux-armv7l/wheel/forgi/threedee/data
2021-11-29T21:17:56,597   copying build/lib.linux-armv7l-3.9/forgi/threedee/data/ideal_1_9_10_18.pdb -> build/bdist.linux-armv7l/wheel/forgi/threedee/data
2021-11-29T21:17:56,600   copying build/lib.linux-armv7l-3.9/forgi/threedee/data/ideal_1_6_7_12.spqr.pdb -> build/bdist.linux-armv7l/wheel/forgi/threedee/data
2021-11-29T21:17:56,602   copying build/lib.linux-armv7l-3.9/forgi/threedee/data/ideal_1_30_31_60.pdb -> build/bdist.linux-armv7l/wheel/forgi/threedee/data
2021-11-29T21:17:56,607   copying build/lib.linux-armv7l-3.9/forgi/threedee/data/ideal_1_39_40_78.spqr.pdb -> build/bdist.linux-armv7l/wheel/forgi/threedee/data
2021-11-29T21:17:56,609   copying build/lib.linux-armv7l-3.9/forgi/threedee/data/ideal_1_23_24_46.pdb -> build/bdist.linux-armv7l/wheel/forgi/threedee/data
2021-11-29T21:17:56,614   copying build/lib.linux-armv7l-3.9/forgi/threedee/data/ideal_1_4_5_8.pdb -> build/bdist.linux-armv7l/wheel/forgi/threedee/data
2021-11-29T21:17:56,616   copying build/lib.linux-armv7l-3.9/forgi/threedee/data/ideal_1_37_38_74.pdb -> build/bdist.linux-armv7l/wheel/forgi/threedee/data
2021-11-29T21:17:56,622   copying build/lib.linux-armv7l-3.9/forgi/threedee/data/ideal_1_34_35_68.pdb -> build/bdist.linux-armv7l/wheel/forgi/threedee/data
2021-11-29T21:17:56,627   copying build/lib.linux-armv7l-3.9/forgi/threedee/data/aminor_geometries.csv -> build/bdist.linux-armv7l/wheel/forgi/threedee/data
2021-11-29T21:17:57,114   copying build/lib.linux-armv7l-3.9/forgi/threedee/data/ideal_1_2_3_4.spqr.pdb -> build/bdist.linux-armv7l/wheel/forgi/threedee/data
2021-11-29T21:17:57,117   creating build/bdist.linux-armv7l/wheel/forgi/threedee/utilities
2021-11-29T21:17:57,118   copying build/lib.linux-armv7l-3.9/forgi/threedee/utilities/virtual_residues.py -> build/bdist.linux-armv7l/wheel/forgi/threedee/utilities
2021-11-29T21:17:57,120   copying build/lib.linux-armv7l-3.9/forgi/threedee/utilities/modified_res.py -> build/bdist.linux-armv7l/wheel/forgi/threedee/utilities
2021-11-29T21:17:57,123   copying build/lib.linux-armv7l-3.9/forgi/threedee/utilities/__init__.py -> build/bdist.linux-armv7l/wheel/forgi/threedee/utilities
2021-11-29T21:17:57,124   copying build/lib.linux-armv7l-3.9/forgi/threedee/utilities/graph_pdb.py -> build/bdist.linux-armv7l/wheel/forgi/threedee/utilities
2021-11-29T21:17:57,128   copying build/lib.linux-armv7l-3.9/forgi/threedee/utilities/my_math.py -> build/bdist.linux-armv7l/wheel/forgi/threedee/utilities
2021-11-29T21:17:57,131   copying build/lib.linux-armv7l-3.9/forgi/threedee/utilities/pdb.py -> build/bdist.linux-armv7l/wheel/forgi/threedee/utilities
2021-11-29T21:17:57,135   copying build/lib.linux-armv7l-3.9/forgi/threedee/utilities/mcannotate.py -> build/bdist.linux-armv7l/wheel/forgi/threedee/utilities
2021-11-29T21:17:57,137   copying build/lib.linux-armv7l-3.9/forgi/threedee/utilities/cytvec.cpython-39-arm-linux-gnueabihf.so -> build/bdist.linux-armv7l/wheel/forgi/threedee/utilities
2021-11-29T21:17:57,174   copying build/lib.linux-armv7l-3.9/forgi/threedee/utilities/vector.py -> build/bdist.linux-armv7l/wheel/forgi/threedee/utilities
2021-11-29T21:17:57,177   copying build/lib.linux-armv7l-3.9/forgi/threedee/utilities/_dssr.py -> build/bdist.linux-armv7l/wheel/forgi/threedee/utilities
2021-11-29T21:17:57,180   copying build/lib.linux-armv7l-3.9/forgi/threedee/utilities/average_stem_vres_atom_positions.py -> build/bdist.linux-armv7l/wheel/forgi/threedee/utilities
2021-11-29T21:17:57,183   copying build/lib.linux-armv7l-3.9/forgi/threedee/utilities/modified_res_lookup.py -> build/bdist.linux-armv7l/wheel/forgi/threedee/utilities
2021-11-29T21:17:57,187   creating build/bdist.linux-armv7l/wheel/forgi/threedee/visual
2021-11-29T21:17:57,188   copying build/lib.linux-armv7l-3.9/forgi/threedee/visual/__init__.py -> build/bdist.linux-armv7l/wheel/forgi/threedee/visual
2021-11-29T21:17:57,190   copying build/lib.linux-armv7l-3.9/forgi/threedee/visual/pymol.py -> build/bdist.linux-armv7l/wheel/forgi/threedee/visual
2021-11-29T21:17:57,193   copying build/lib.linux-armv7l-3.9/forgi/threedee/__init__.py -> build/bdist.linux-armv7l/wheel/forgi/threedee
2021-11-29T21:17:57,196   creating build/bdist.linux-armv7l/wheel/forgi/threedee/model
2021-11-29T21:17:57,197   copying build/lib.linux-armv7l-3.9/forgi/threedee/model/transform_cg.py -> build/bdist.linux-armv7l/wheel/forgi/threedee/model
2021-11-29T21:17:57,199   copying build/lib.linux-armv7l-3.9/forgi/threedee/model/coarse_grain.py -> build/bdist.linux-armv7l/wheel/forgi/threedee/model
2021-11-29T21:17:57,203   copying build/lib.linux-armv7l-3.9/forgi/threedee/model/_ensemble.py -> build/bdist.linux-armv7l/wheel/forgi/threedee/model
2021-11-29T21:17:57,206   copying build/lib.linux-armv7l-3.9/forgi/threedee/model/similarity.py -> build/bdist.linux-armv7l/wheel/forgi/threedee/model
2021-11-29T21:17:57,209   copying build/lib.linux-armv7l-3.9/forgi/threedee/model/__init__.py -> build/bdist.linux-armv7l/wheel/forgi/threedee/model
2021-11-29T21:17:57,211   copying build/lib.linux-armv7l-3.9/forgi/threedee/model/_ensemble2.py -> build/bdist.linux-armv7l/wheel/forgi/threedee/model
2021-11-29T21:17:57,214   copying build/lib.linux-armv7l-3.9/forgi/threedee/model/descriptors.py -> build/bdist.linux-armv7l/wheel/forgi/threedee/model
2021-11-29T21:17:57,216   copying build/lib.linux-armv7l-3.9/forgi/threedee/model/linecloud.py -> build/bdist.linux-armv7l/wheel/forgi/threedee/model
2021-11-29T21:17:57,219   copying build/lib.linux-armv7l-3.9/forgi/threedee/model/stats.py -> build/bdist.linux-armv7l/wheel/forgi/threedee/model
2021-11-29T21:17:57,223   creating build/bdist.linux-armv7l/wheel/forgi/threedee/classification
2021-11-29T21:17:57,224   copying build/lib.linux-armv7l-3.9/forgi/threedee/classification/__init__.py -> build/bdist.linux-armv7l/wheel/forgi/threedee/classification
2021-11-29T21:17:57,226   copying build/lib.linux-armv7l-3.9/forgi/threedee/classification/contact.py -> build/bdist.linux-armv7l/wheel/forgi/threedee/classification
2021-11-29T21:17:57,229   creating build/bdist.linux-armv7l/wheel/forgi/threedee/classification/_training
2021-11-29T21:17:57,230   copying build/lib.linux-armv7l-3.9/forgi/threedee/classification/_training/_parse_utils.py -> build/bdist.linux-armv7l/wheel/forgi/threedee/classification/_training
2021-11-29T21:17:57,232   copying build/lib.linux-armv7l-3.9/forgi/threedee/classification/_training/aminor_training.py -> build/bdist.linux-armv7l/wheel/forgi/threedee/classification/_training
2021-11-29T21:17:57,235   copying build/lib.linux-armv7l-3.9/forgi/threedee/classification/_training/__init__.py -> build/bdist.linux-armv7l/wheel/forgi/threedee/classification/_training
2021-11-29T21:17:57,237   copying build/lib.linux-armv7l-3.9/forgi/threedee/classification/_training/train_aminor.py -> build/bdist.linux-armv7l/wheel/forgi/threedee/classification/_training
2021-11-29T21:17:57,239   copying build/lib.linux-armv7l-3.9/forgi/threedee/classification/aminor.py -> build/bdist.linux-armv7l/wheel/forgi/threedee/classification
2021-11-29T21:17:57,242   copying build/lib.linux-armv7l-3.9/forgi/whitelist.py -> build/bdist.linux-armv7l/wheel/forgi
2021-11-29T21:17:57,245   creating build/bdist.linux-armv7l/wheel/forgi/projection
2021-11-29T21:17:57,246   copying build/lib.linux-armv7l-3.9/forgi/projection/__init__.py -> build/bdist.linux-armv7l/wheel/forgi/projection
2021-11-29T21:17:57,248   copying build/lib.linux-armv7l-3.9/forgi/projection/projection2d.py -> build/bdist.linux-armv7l/wheel/forgi/projection
2021-11-29T21:17:57,252   copying build/lib.linux-armv7l-3.9/forgi/projection/hausdorff.py -> build/bdist.linux-armv7l/wheel/forgi/projection
2021-11-29T21:17:57,255   running install_data
2021-11-29T21:17:57,257   creating build/bdist.linux-armv7l/wheel/forgi-2.1.2.data
2021-11-29T21:17:57,258   creating build/bdist.linux-armv7l/wheel/forgi-2.1.2.data/data
2021-11-29T21:17:57,259   copying CREDITS -> build/bdist.linux-armv7l/wheel/forgi-2.1.2.data/data/
2021-11-29T21:17:57,262   copying LICENSE -> build/bdist.linux-armv7l/wheel/forgi-2.1.2.data/data/
2021-11-29T21:17:57,264   running install_egg_info
2021-11-29T21:17:57,289   running egg_info
2021-11-29T21:17:57,289   writing forgi.egg-info/PKG-INFO
2021-11-29T21:17:57,291   writing dependency_links to forgi.egg-info/dependency_links.txt
2021-11-29T21:17:57,293   writing requirements to forgi.egg-info/requires.txt
2021-11-29T21:17:57,294   writing top-level names to forgi.egg-info/top_level.txt
2021-11-29T21:17:57,334   reading manifest file 'forgi.egg-info/SOURCES.txt'
2021-11-29T21:17:57,343   reading manifest template 'MANIFEST.in'
2021-11-29T21:17:57,421   adding license file 'LICENSE'
2021-11-29T21:17:57,422   adding license file 'CREDITS'
2021-11-29T21:17:57,432   writing manifest file 'forgi.egg-info/SOURCES.txt'
2021-11-29T21:17:57,434   Copying forgi.egg-info to build/bdist.linux-armv7l/wheel/forgi-2.1.2-py3.9.egg-info
2021-11-29T21:17:57,446   running install_scripts
2021-11-29T21:17:57,470   creating build/bdist.linux-armv7l/wheel/forgi-2.1.2.data/scripts
2021-11-29T21:17:57,470   copying build/scripts-3.9/pseudoknot_analyzer.py -> build/bdist.linux-armv7l/wheel/forgi-2.1.2.data/scripts
2021-11-29T21:17:57,474   copying build/scripts-3.9/forgi_config.py -> build/bdist.linux-armv7l/wheel/forgi-2.1.2.data/scripts
2021-11-29T21:17:57,476   copying build/scripts-3.9/describe_cg.py -> build/bdist.linux-armv7l/wheel/forgi-2.1.2.data/scripts
2021-11-29T21:17:57,478   copying build/scripts-3.9/compare_RNA.py -> build/bdist.linux-armv7l/wheel/forgi-2.1.2.data/scripts
2021-11-29T21:17:57,480   copying build/scripts-3.9/rnaConvert.py -> build/bdist.linux-armv7l/wheel/forgi-2.1.2.data/scripts
2021-11-29T21:17:57,483   copying build/scripts-3.9/visualize_rna.py -> build/bdist.linux-armv7l/wheel/forgi-2.1.2.data/scripts
2021-11-29T21:17:57,485   changing mode of build/bdist.linux-armv7l/wheel/forgi-2.1.2.data/scripts/pseudoknot_analyzer.py to 755
2021-11-29T21:17:57,485   changing mode of build/bdist.linux-armv7l/wheel/forgi-2.1.2.data/scripts/forgi_config.py to 755
2021-11-29T21:17:57,485   changing mode of build/bdist.linux-armv7l/wheel/forgi-2.1.2.data/scripts/describe_cg.py to 755
2021-11-29T21:17:57,485   changing mode of build/bdist.linux-armv7l/wheel/forgi-2.1.2.data/scripts/compare_RNA.py to 755
2021-11-29T21:17:57,486   changing mode of build/bdist.linux-armv7l/wheel/forgi-2.1.2.data/scripts/rnaConvert.py to 755
2021-11-29T21:17:57,486   changing mode of build/bdist.linux-armv7l/wheel/forgi-2.1.2.data/scripts/visualize_rna.py to 755
2021-11-29T21:17:57,526   adding license file "CREDITS" (matched pattern "CREDITS")
2021-11-29T21:17:57,527   adding license file "LICENSE" (matched pattern "LICENSE")
2021-11-29T21:17:57,532   creating build/bdist.linux-armv7l/wheel/forgi-2.1.2.dist-info/WHEEL
2021-11-29T21:17:57,535   creating '/tmp/pip-wheel-lfarzhdn/forgi-2.1.2-cp39-cp39-linux_armv7l.whl' and adding 'build/bdist.linux-armv7l/wheel' to it
2021-11-29T21:17:57,537   adding 'forgi/__init__.py'
2021-11-29T21:17:57,538   adding 'forgi/config.py'
2021-11-29T21:17:57,539   adding 'forgi/whitelist.py'
2021-11-29T21:17:57,541   adding 'forgi/_k2n_standalone/__init__.py'
2021-11-29T21:17:57,543   adding 'forgi/_k2n_standalone/bpseq.py'
2021-11-29T21:17:57,544   adding 'forgi/_k2n_standalone/ct_simple.py'
2021-11-29T21:17:57,549   adding 'forgi/_k2n_standalone/dict2d.py'
2021-11-29T21:17:57,559   adding 'forgi/_k2n_standalone/knots.py'
2021-11-29T21:17:57,562   adding 'forgi/_k2n_standalone/knotted2nested.py'
2021-11-29T21:17:57,563   adding 'forgi/_k2n_standalone/output.py'
2021-11-29T21:17:57,566   adding 'forgi/_k2n_standalone/rna2d.py'
2021-11-29T21:17:57,567   adding 'forgi/graph/__init__.py'
2021-11-29T21:17:57,569   adding 'forgi/graph/_basegraph.py'
2021-11-29T21:17:57,571   adding 'forgi/graph/_cofold.py'
2021-11-29T21:17:57,573   adding 'forgi/graph/_graph_construction.py'
2021-11-29T21:17:57,586   adding 'forgi/graph/bulge_graph.py'
2021-11-29T21:17:57,588   adding 'forgi/graph/residue.py'
2021-11-29T21:17:57,592   adding 'forgi/graph/sequence.py'
2021-11-29T21:17:57,594   adding 'forgi/graph/transform_graphs.py'
2021-11-29T21:17:57,595   adding 'forgi/projection/__init__.py'
2021-11-29T21:17:57,599   adding 'forgi/projection/hausdorff.py'
2021-11-29T21:17:57,605   adding 'forgi/projection/projection2d.py'
2021-11-29T21:17:57,606   adding 'forgi/threedee/__init__.py'
2021-11-29T21:17:57,608   adding 'forgi/threedee/classification/__init__.py'
2021-11-29T21:17:57,611   adding 'forgi/threedee/classification/aminor.py'
2021-11-29T21:17:57,612   adding 'forgi/threedee/classification/contact.py'
2021-11-29T21:17:57,613   adding 'forgi/threedee/classification/_training/__init__.py'
2021-11-29T21:17:57,614   adding 'forgi/threedee/classification/_training/_parse_utils.py'
2021-11-29T21:17:57,617   adding 'forgi/threedee/classification/_training/aminor_training.py'
2021-11-29T21:17:57,619   adding 'forgi/threedee/classification/_training/train_aminor.py'
2021-11-29T21:18:01,230   adding 'forgi/threedee/data/aminor_geometries.csv'
2021-11-29T21:18:01,417   adding 'forgi/threedee/data/aminor_params.json'
2021-11-29T21:18:09,171   adding 'forgi/threedee/data/average_atom_positions.json'
2021-11-29T21:18:09,763   adding 'forgi/threedee/data/ideal_1_10_11_20.pdb'
2021-11-29T21:18:09,765   adding 'forgi/threedee/data/ideal_1_10_11_20.spqr.pdb'
2021-11-29T21:18:09,772   adding 'forgi/threedee/data/ideal_1_11_12_22.pdb'
2021-11-29T21:18:09,774   adding 'forgi/threedee/data/ideal_1_11_12_22.spqr.pdb'
2021-11-29T21:18:09,781   adding 'forgi/threedee/data/ideal_1_12_13_24.pdb'
2021-11-29T21:18:09,783   adding 'forgi/threedee/data/ideal_1_12_13_24.spqr.pdb'
2021-11-29T21:18:09,791   adding 'forgi/threedee/data/ideal_1_13_14_26.pdb'
2021-11-29T21:18:09,793   adding 'forgi/threedee/data/ideal_1_13_14_26.spqr.pdb'
2021-11-29T21:18:09,801   adding 'forgi/threedee/data/ideal_1_14_15_28.pdb'
2021-11-29T21:18:09,803   adding 'forgi/threedee/data/ideal_1_14_15_28.spqr.pdb'
2021-11-29T21:18:09,811   adding 'forgi/threedee/data/ideal_1_15_16_30.pdb'
2021-11-29T21:18:09,814   adding 'forgi/threedee/data/ideal_1_15_16_30.spqr.pdb'
2021-11-29T21:18:09,823   adding 'forgi/threedee/data/ideal_1_16_17_32.pdb'
2021-11-29T21:18:09,825   adding 'forgi/threedee/data/ideal_1_16_17_32.spqr.pdb'
2021-11-29T21:18:09,836   adding 'forgi/threedee/data/ideal_1_17_18_34.pdb'
2021-11-29T21:18:09,839   adding 'forgi/threedee/data/ideal_1_17_18_34.spqr.pdb'
2021-11-29T21:18:09,849   adding 'forgi/threedee/data/ideal_1_18_19_36.pdb'
2021-11-29T21:18:09,851   adding 'forgi/threedee/data/ideal_1_18_19_36.spqr.pdb'
2021-11-29T21:18:09,862   adding 'forgi/threedee/data/ideal_1_19_20_38.pdb'
2021-11-29T21:18:09,865   adding 'forgi/threedee/data/ideal_1_19_20_38.spqr.pdb'
2021-11-29T21:18:09,866   adding 'forgi/threedee/data/ideal_1_1_2_2.pdb'
2021-11-29T21:18:09,868   adding 'forgi/threedee/data/ideal_1_1_2_2.spqr.pdb'
2021-11-29T21:18:09,881   adding 'forgi/threedee/data/ideal_1_20_21_40.pdb'
2021-11-29T21:18:09,884   adding 'forgi/threedee/data/ideal_1_20_21_40.spqr.pdb'
2021-11-29T21:18:09,895   adding 'forgi/threedee/data/ideal_1_21_22_42.pdb'
2021-11-29T21:18:09,899   adding 'forgi/threedee/data/ideal_1_21_22_42.spqr.pdb'
2021-11-29T21:18:09,911   adding 'forgi/threedee/data/ideal_1_22_23_44.pdb'
2021-11-29T21:18:09,914   adding 'forgi/threedee/data/ideal_1_22_23_44.spqr.pdb'
2021-11-29T21:18:09,929   adding 'forgi/threedee/data/ideal_1_23_24_46.pdb'
2021-11-29T21:18:09,932   adding 'forgi/threedee/data/ideal_1_23_24_46.spqr.pdb'
2021-11-29T21:18:09,945   adding 'forgi/threedee/data/ideal_1_24_25_48.pdb'
2021-11-29T21:18:09,948   adding 'forgi/threedee/data/ideal_1_24_25_48.spqr.pdb'
2021-11-29T21:18:09,962   adding 'forgi/threedee/data/ideal_1_25_26_50.pdb'
2021-11-29T21:18:09,965   adding 'forgi/threedee/data/ideal_1_25_26_50.spqr.pdb'
2021-11-29T21:18:09,979   adding 'forgi/threedee/data/ideal_1_26_27_52.pdb'
2021-11-29T21:18:09,983   adding 'forgi/threedee/data/ideal_1_26_27_52.spqr.pdb'
2021-11-29T21:18:09,997   adding 'forgi/threedee/data/ideal_1_27_28_54.pdb'
2021-11-29T21:18:10,001   adding 'forgi/threedee/data/ideal_1_27_28_54.spqr.pdb'
2021-11-29T21:18:10,016   adding 'forgi/threedee/data/ideal_1_28_29_56.pdb'
2021-11-29T21:18:10,019   adding 'forgi/threedee/data/ideal_1_28_29_56.spqr.pdb'
2021-11-29T21:18:10,035   adding 'forgi/threedee/data/ideal_1_29_30_58.pdb'
2021-11-29T21:18:10,039   adding 'forgi/threedee/data/ideal_1_29_30_58.spqr.pdb'
2021-11-29T21:18:10,041   adding 'forgi/threedee/data/ideal_1_2_3_4.pdb'
2021-11-29T21:18:10,042   adding 'forgi/threedee/data/ideal_1_2_3_4.spqr.pdb'
2021-11-29T21:18:10,058   adding 'forgi/threedee/data/ideal_1_30_31_60.pdb'
2021-11-29T21:18:10,062   adding 'forgi/threedee/data/ideal_1_30_31_60.spqr.pdb'
2021-11-29T21:18:10,078   adding 'forgi/threedee/data/ideal_1_31_32_62.pdb'
2021-11-29T21:18:10,082   adding 'forgi/threedee/data/ideal_1_31_32_62.spqr.pdb'
2021-11-29T21:18:10,099   adding 'forgi/threedee/data/ideal_1_32_33_64.pdb'
2021-11-29T21:18:10,103   adding 'forgi/threedee/data/ideal_1_32_33_64.spqr.pdb'
2021-11-29T21:18:10,121   adding 'forgi/threedee/data/ideal_1_33_34_66.pdb'
2021-11-29T21:18:10,125   adding 'forgi/threedee/data/ideal_1_33_34_66.spqr.pdb'
2021-11-29T21:18:10,144   adding 'forgi/threedee/data/ideal_1_34_35_68.pdb'
2021-11-29T21:18:10,148   adding 'forgi/threedee/data/ideal_1_34_35_68.spqr.pdb'
2021-11-29T21:18:10,167   adding 'forgi/threedee/data/ideal_1_35_36_70.pdb'
2021-11-29T21:18:10,171   adding 'forgi/threedee/data/ideal_1_35_36_70.spqr.pdb'
2021-11-29T21:18:10,190   adding 'forgi/threedee/data/ideal_1_36_37_72.pdb'
2021-11-29T21:18:10,195   adding 'forgi/threedee/data/ideal_1_36_37_72.spqr.pdb'
2021-11-29T21:18:10,215   adding 'forgi/threedee/data/ideal_1_37_38_74.pdb'
2021-11-29T21:18:10,219   adding 'forgi/threedee/data/ideal_1_37_38_74.spqr.pdb'
2021-11-29T21:18:10,240   adding 'forgi/threedee/data/ideal_1_38_39_76.pdb'
2021-11-29T21:18:10,245   adding 'forgi/threedee/data/ideal_1_38_39_76.spqr.pdb'
2021-11-29T21:18:10,266   adding 'forgi/threedee/data/ideal_1_39_40_78.pdb'
2021-11-29T21:18:10,271   adding 'forgi/threedee/data/ideal_1_39_40_78.spqr.pdb'
2021-11-29T21:18:10,274   adding 'forgi/threedee/data/ideal_1_3_4_6.pdb'
2021-11-29T21:18:10,275   adding 'forgi/threedee/data/ideal_1_3_4_6.spqr.pdb'
2021-11-29T21:18:10,298   adding 'forgi/threedee/data/ideal_1_40_41_80.pdb'
2021-11-29T21:18:10,303   adding 'forgi/threedee/data/ideal_1_40_41_80.spqr.pdb'
2021-11-29T21:18:10,306   adding 'forgi/threedee/data/ideal_1_4_5_8.pdb'
2021-11-29T21:18:10,307   adding 'forgi/threedee/data/ideal_1_4_5_8.spqr.pdb'
2021-11-29T21:18:10,310   adding 'forgi/threedee/data/ideal_1_5_6_10.pdb'
2021-11-29T21:18:10,312   adding 'forgi/threedee/data/ideal_1_5_6_10.spqr.pdb'
2021-11-29T21:18:10,315   adding 'forgi/threedee/data/ideal_1_6_7_12.pdb'
2021-11-29T21:18:10,317   adding 'forgi/threedee/data/ideal_1_6_7_12.spqr.pdb'
2021-11-29T21:18:10,321   adding 'forgi/threedee/data/ideal_1_7_8_14.pdb'
2021-11-29T21:18:10,323   adding 'forgi/threedee/data/ideal_1_7_8_14.spqr.pdb'
2021-11-29T21:18:10,328   adding 'forgi/threedee/data/ideal_1_8_9_16.pdb'
2021-11-29T21:18:10,330   adding 'forgi/threedee/data/ideal_1_8_9_16.spqr.pdb'
2021-11-29T21:18:10,335   adding 'forgi/threedee/data/ideal_1_9_10_18.pdb'
2021-11-29T21:18:10,337   adding 'forgi/threedee/data/ideal_1_9_10_18.spqr.pdb'
2021-11-29T21:18:10,339   adding 'forgi/threedee/model/__init__.py'
2021-11-29T21:18:10,343   adding 'forgi/threedee/model/_ensemble.py'
2021-11-29T21:18:10,349   adding 'forgi/threedee/model/_ensemble2.py'
2021-11-29T21:18:10,360   adding 'forgi/threedee/model/coarse_grain.py'
2021-11-29T21:18:10,362   adding 'forgi/threedee/model/descriptors.py'
2021-11-29T21:18:10,365   adding 'forgi/threedee/model/linecloud.py'
2021-11-29T21:18:10,367   adding 'forgi/threedee/model/similarity.py'
2021-11-29T21:18:10,371   adding 'forgi/threedee/model/stats.py'
2021-11-29T21:18:10,373   adding 'forgi/threedee/model/transform_cg.py'
2021-11-29T21:18:10,375   adding 'forgi/threedee/utilities/__init__.py'
2021-11-29T21:18:10,378   adding 'forgi/threedee/utilities/_dssr.py'
2021-11-29T21:18:10,381   adding 'forgi/threedee/utilities/average_stem_vres_atom_positions.py'
2021-11-29T21:18:10,662   adding 'forgi/threedee/utilities/cytvec.cpython-39-arm-linux-gnueabihf.so'
2021-11-29T21:18:10,683   adding 'forgi/threedee/utilities/graph_pdb.py'
2021-11-29T21:18:10,685   adding 'forgi/threedee/utilities/mcannotate.py'
2021-11-29T21:18:10,687   adding 'forgi/threedee/utilities/modified_res.py'
2021-11-29T21:18:10,693   adding 'forgi/threedee/utilities/modified_res_lookup.py'
2021-11-29T21:18:10,695   adding 'forgi/threedee/utilities/my_math.py'
2021-11-29T21:18:10,700   adding 'forgi/threedee/utilities/pdb.py'
2021-11-29T21:18:10,707   adding 'forgi/threedee/utilities/vector.py'
2021-11-29T21:18:10,709   adding 'forgi/threedee/utilities/virtual_residues.py'
2021-11-29T21:18:10,710   adding 'forgi/threedee/visual/__init__.py'
2021-11-29T21:18:10,714   adding 'forgi/threedee/visual/pymol.py'
2021-11-29T21:18:10,716   adding 'forgi/utilities/__init__.py'
2021-11-29T21:18:10,719   adding 'forgi/utilities/commandline_utils.py'
2021-11-29T21:18:10,720   adding 'forgi/utilities/containers.py'
2021-11-29T21:18:10,722   adding 'forgi/utilities/debug.py'
2021-11-29T21:18:10,723   adding 'forgi/utilities/exceptions.py'
2021-11-29T21:18:10,724   adding 'forgi/utilities/graph.py'
2021-11-29T21:18:10,726   adding 'forgi/utilities/numbered_dotbracket.py'
2021-11-29T21:18:10,728   adding 'forgi/utilities/observedDict.py'
2021-11-29T21:18:10,730   adding 'forgi/utilities/stuff.py'
2021-11-29T21:18:10,732   adding 'forgi/visual/__init__.py'
2021-11-29T21:18:10,734   adding 'forgi/visual/fornac.py'
2021-11-29T21:18:10,737   adding 'forgi/visual/mplotlib.py'
2021-11-29T21:18:10,740   adding 'forgi-2.1.2.data/data/CREDITS'
2021-11-29T21:18:10,746   adding 'forgi-2.1.2.data/data/LICENSE'
2021-11-29T21:18:10,749   adding 'forgi-2.1.2.data/scripts/compare_RNA.py'
2021-11-29T21:18:10,751   adding 'forgi-2.1.2.data/scripts/describe_cg.py'
2021-11-29T21:18:10,753   adding 'forgi-2.1.2.data/scripts/forgi_config.py'
2021-11-29T21:18:10,756   adding 'forgi-2.1.2.data/scripts/pseudoknot_analyzer.py'
2021-11-29T21:18:10,758   adding 'forgi-2.1.2.data/scripts/rnaConvert.py'
2021-11-29T21:18:10,760   adding 'forgi-2.1.2.data/scripts/visualize_rna.py'
2021-11-29T21:18:10,763   adding 'forgi-2.1.2.dist-info/CREDITS'
2021-11-29T21:18:10,769   adding 'forgi-2.1.2.dist-info/LICENSE'
2021-11-29T21:18:10,770   adding 'forgi-2.1.2.dist-info/METADATA'
2021-11-29T21:18:10,771   adding 'forgi-2.1.2.dist-info/WHEEL'
2021-11-29T21:18:10,772   adding 'forgi-2.1.2.dist-info/top_level.txt'
2021-11-29T21:18:10,775   adding 'forgi-2.1.2.dist-info/RECORD'
2021-11-29T21:18:11,139   removing build/bdist.linux-armv7l/wheel
2021-11-29T21:18:11,398   Building wheel for forgi (setup.py): finished with status 'done'
2021-11-29T21:18:11,750   Created wheel for forgi: filename=forgi-2.1.2-cp39-cp39-linux_armv7l.whl size=27926217 sha256=4d8967854ad1577550cea92b6474561726648c605f63ab598218f7ee1c21b1ee
2021-11-29T21:18:11,750   Stored in directory: /tmp/pip-ephem-wheel-cache-94x6pdii/wheels/af/bf/ae/d63fd62d6aa47369aff8b8f20250c4287fef63c98f4af0fe21
2021-11-29T21:18:11,780 Successfully built forgi
2021-11-29T21:18:12,594 Removed build tracker: '/tmp/pip-req-tracker-5brby56k'