2021-12-01T10:01:26,046 Created temporary directory: /tmp/pip-ephem-wheel-cache-z3s919fv
2021-12-01T10:01:26,053 Created temporary directory: /tmp/pip-req-tracker-v49jhinp
2021-12-01T10:01:26,054 Initialized build tracking at /tmp/pip-req-tracker-v49jhinp
2021-12-01T10:01:26,054 Created build tracker: /tmp/pip-req-tracker-v49jhinp
2021-12-01T10:01:26,055 Entered build tracker: /tmp/pip-req-tracker-v49jhinp
2021-12-01T10:01:26,056 Created temporary directory: /tmp/pip-wheel-kcrjugce
2021-12-01T10:01:26,127 Looking in indexes: https://pypi.org/simple, https://www.piwheels.org/simple
2021-12-01T10:01:26,130 2 location(s) to search for versions of kage-genotyper:
2021-12-01T10:01:26,130 * https://pypi.org/simple/kage-genotyper/
2021-12-01T10:01:26,130 * https://www.piwheels.org/simple/kage-genotyper/
2021-12-01T10:01:26,131 Fetching project page and analyzing links: https://pypi.org/simple/kage-genotyper/
2021-12-01T10:01:26,133 Getting page https://pypi.org/simple/kage-genotyper/
2021-12-01T10:01:26,138 Found index url https://pypi.org/simple
2021-12-01T10:01:26,463   Found link https://files.pythonhosted.org/packages/e7/66/016860668992a70bab9c872c5032fbc34e2f9ecc6936b95b4e9a0b0c812b/kage-genotyper-0.0.2.tar.gz#sha256=54ba5a094a15547344c88bd7063e22c9d932bbf7eacfbc8588a83d8b9b42dfc1 (from https://pypi.org/simple/kage-genotyper/), version: 0.0.2
2021-12-01T10:01:26,464   Found link https://files.pythonhosted.org/packages/80/ee/e08c95ccb0c401cfb2049e7271acdcb455196900f035e0700f6229d6c25d/kage-genotyper-0.0.3.tar.gz#sha256=727bf1ff9880dea8e8fe1a2aa5da4d0797fd5f64d75eda6a1ec53be5caa7d9f3 (from https://pypi.org/simple/kage-genotyper/), version: 0.0.3
2021-12-01T10:01:26,465   Found link https://files.pythonhosted.org/packages/47/5d/a155072db4e4e73f1a7b0f115f4641172458ef39411234990de2601e453a/kage-genotyper-0.0.4.tar.gz#sha256=d4316597d56b72c41623b03f06ed0fcacdfe0e301ad49d49fadcfd41e1f881f6 (from https://pypi.org/simple/kage-genotyper/), version: 0.0.4
2021-12-01T10:01:26,465   Found link https://files.pythonhosted.org/packages/9d/e0/92cb3c9de8704e94d12b1d13eee089389ba0b8cdeb5f7606e82357615039/kage-genotyper-0.0.5.tar.gz#sha256=78c0fdef5e5cf0ee401e5188dece6e297c3e20c3d72aa355c86426149d31819f (from https://pypi.org/simple/kage-genotyper/), version: 0.0.5
2021-12-01T10:01:26,466   Found link https://files.pythonhosted.org/packages/98/56/5a01b760b477d84f2e0d4284563b1a49d4c7af720ce16d8fe35273e43659/kage-genotyper-0.0.6.tar.gz#sha256=ddc00d681b1ff98043bf087216c44681f6dc8dbfad4d327a2775f3eec6937fae (from https://pypi.org/simple/kage-genotyper/), version: 0.0.6
2021-12-01T10:01:26,467 Fetching project page and analyzing links: https://www.piwheels.org/simple/kage-genotyper/
2021-12-01T10:01:26,468 Getting page https://www.piwheels.org/simple/kage-genotyper/
2021-12-01T10:01:26,470 Found index url https://www.piwheels.org/simple
2021-12-01T10:01:26,690   Skipping link: No binaries permitted for kage-genotyper: https://www.piwheels.org/simple/kage-genotyper/kage_genotyper-0.0.3-py3-none-any.whl#sha256=7d52b7bdc251d8fa41b2627126137f9c9d6b34e76dcc9d8c85de8d0d42f6bf33 (from https://www.piwheels.org/simple/kage-genotyper/)
2021-12-01T10:01:26,691   Skipping link: No binaries permitted for kage-genotyper: https://www.piwheels.org/simple/kage-genotyper/kage_genotyper-0.0.4-py3-none-any.whl#sha256=a279c71d67ea133f1cf0818eb5c559c97e5f2460cc45aba044dd17abf30d6446 (from https://www.piwheels.org/simple/kage-genotyper/)
2021-12-01T10:01:26,692   Skipping link: No binaries permitted for kage-genotyper: https://www.piwheels.org/simple/kage-genotyper/kage_genotyper-0.0.5-py3-none-any.whl#sha256=dbca21ae8964d1bf38306442e517c6b17b688a29519f7675082be82135c4c98f (from https://www.piwheels.org/simple/kage-genotyper/)
2021-12-01T10:01:26,723 Given no hashes to check 1 links for project 'kage-genotyper': discarding no candidates
2021-12-01T10:01:26,755 Collecting kage-genotyper==0.0.6
2021-12-01T10:01:26,758   Created temporary directory: /tmp/pip-unpack-ewo3hfns
2021-12-01T10:01:27,063   Downloading kage-genotyper-0.0.6.tar.gz (31 kB)
2021-12-01T10:01:27,277   Added kage-genotyper==0.0.6 from https://files.pythonhosted.org/packages/98/56/5a01b760b477d84f2e0d4284563b1a49d4c7af720ce16d8fe35273e43659/kage-genotyper-0.0.6.tar.gz#sha256=ddc00d681b1ff98043bf087216c44681f6dc8dbfad4d327a2775f3eec6937fae to build tracker '/tmp/pip-req-tracker-v49jhinp'
2021-12-01T10:01:27,279     Running setup.py (path:/tmp/pip-wheel-kcrjugce/kage-genotyper_b4cad37d5d3949b6ba2a7d3e9f99414c/setup.py) egg_info for package kage-genotyper
2021-12-01T10:01:27,281     Created temporary directory: /tmp/pip-pip-egg-info-vsgvs5ca
2021-12-01T10:01:27,281     Running command python setup.py egg_info
2021-12-01T10:01:29,485     running egg_info
2021-12-01T10:01:29,491     creating /tmp/pip-pip-egg-info-vsgvs5ca/kage_genotyper.egg-info
2021-12-01T10:01:29,493     writing /tmp/pip-pip-egg-info-vsgvs5ca/kage_genotyper.egg-info/PKG-INFO
2021-12-01T10:01:29,499     writing dependency_links to /tmp/pip-pip-egg-info-vsgvs5ca/kage_genotyper.egg-info/dependency_links.txt
2021-12-01T10:01:29,502     writing requirements to /tmp/pip-pip-egg-info-vsgvs5ca/kage_genotyper.egg-info/requires.txt
2021-12-01T10:01:29,505     writing top-level names to /tmp/pip-pip-egg-info-vsgvs5ca/kage_genotyper.egg-info/top_level.txt
2021-12-01T10:01:29,507     writing entry points to /tmp/pip-pip-egg-info-vsgvs5ca/kage_genotyper.egg-info/entry_points.txt
2021-12-01T10:01:29,510     writing manifest file '/tmp/pip-pip-egg-info-vsgvs5ca/kage_genotyper.egg-info/SOURCES.txt'
2021-12-01T10:01:29,873     reading manifest file '/tmp/pip-pip-egg-info-vsgvs5ca/kage_genotyper.egg-info/SOURCES.txt'
2021-12-01T10:01:29,882     writing manifest file '/tmp/pip-pip-egg-info-vsgvs5ca/kage_genotyper.egg-info/SOURCES.txt'
2021-12-01T10:01:30,015   Source in /tmp/pip-wheel-kcrjugce/kage-genotyper_b4cad37d5d3949b6ba2a7d3e9f99414c has version 0.0.6, which satisfies requirement kage-genotyper==0.0.6 from https://files.pythonhosted.org/packages/98/56/5a01b760b477d84f2e0d4284563b1a49d4c7af720ce16d8fe35273e43659/kage-genotyper-0.0.6.tar.gz#sha256=ddc00d681b1ff98043bf087216c44681f6dc8dbfad4d327a2775f3eec6937fae
2021-12-01T10:01:30,017   Removed kage-genotyper==0.0.6 from https://files.pythonhosted.org/packages/98/56/5a01b760b477d84f2e0d4284563b1a49d4c7af720ce16d8fe35273e43659/kage-genotyper-0.0.6.tar.gz#sha256=ddc00d681b1ff98043bf087216c44681f6dc8dbfad4d327a2775f3eec6937fae from build tracker '/tmp/pip-req-tracker-v49jhinp'
2021-12-01T10:01:30,025 Created temporary directory: /tmp/pip-unpack-fqzi90a0
2021-12-01T10:01:30,026 Building wheels for collected packages: kage-genotyper
2021-12-01T10:01:30,035   Created temporary directory: /tmp/pip-wheel-9_8i0nz_
2021-12-01T10:01:30,036   Building wheel for kage-genotyper (setup.py): started
2021-12-01T10:01:30,037   Destination directory: /tmp/pip-wheel-9_8i0nz_
2021-12-01T10:01:30,037   Running command /usr/bin/python3 -u -c 'import sys, setuptools, tokenize; sys.argv[0] = '"'"'/tmp/pip-wheel-kcrjugce/kage-genotyper_b4cad37d5d3949b6ba2a7d3e9f99414c/setup.py'"'"'; __file__='"'"'/tmp/pip-wheel-kcrjugce/kage-genotyper_b4cad37d5d3949b6ba2a7d3e9f99414c/setup.py'"'"';f=getattr(tokenize, '"'"'open'"'"', open)(__file__);code=f.read().replace('"'"'\r\n'"'"', '"'"'\n'"'"');f.close();exec(compile(code, __file__, '"'"'exec'"'"'))' bdist_wheel -d /tmp/pip-wheel-9_8i0nz_
2021-12-01T10:01:32,324   running bdist_wheel
2021-12-01T10:01:32,341   running build
2021-12-01T10:01:32,342   running build_py
2021-12-01T10:01:32,685   creating build
2021-12-01T10:01:32,686   creating build/lib
2021-12-01T10:01:32,687   creating build/lib/kage
2021-12-01T10:01:32,690   copying kage/command_line_interface.py -> build/lib/kage
2021-12-01T10:01:32,698   copying kage/variant_kmer_analyser.py -> build/lib/kage
2021-12-01T10:01:32,702   copying kage/test.py -> build/lib/kage
2021-12-01T10:01:32,706   copying kage/util.py -> build/lib/kage
2021-12-01T10:01:32,710   copying kage/genotyper.py -> build/lib/kage
2021-12-01T10:01:32,717   copying kage/analysis.py -> build/lib/kage
2021-12-01T10:01:32,725   copying kage/variant_filtering.py -> build/lib/kage
2021-12-01T10:01:32,729   copying kage/models.py -> build/lib/kage
2021-12-01T10:01:32,733   copying kage/node_counts.py -> build/lib/kage
2021-12-01T10:01:32,737   copying kage/index_bundle.py -> build/lib/kage
2021-12-01T10:01:32,741   copying kage/__init__.py -> build/lib/kage
2021-12-01T10:01:32,744   copying kage/combination_model_genotyper.py -> build/lib/kage
2021-12-01T10:01:32,750   copying kage/combomodel.py -> build/lib/kage
2021-12-01T10:01:32,756   copying kage/helper_index.py -> build/lib/kage
2021-12-01T10:01:32,763   copying kage/node_count_model.py -> build/lib/kage
2021-12-01T10:01:32,769   copying kage/joint_distribution.py -> build/lib/kage
2021-12-01T10:01:32,773   copying kage/numpy_genotyper.py -> build/lib/kage
2021-12-01T10:01:32,779   copying kage/simulation.py -> build/lib/kage
2021-12-01T10:01:32,784   copying kage/reference_kmers.py -> build/lib/kage
2021-12-01T10:01:32,788   copying kage/helper_index_using_duplicate_counts.py -> build/lib/kage
2021-12-01T10:01:32,793   copying kage/bayes_genotyper.py -> build/lib/kage
2021-12-01T10:01:32,799   copying kage/reads.py -> build/lib/kage
2021-12-01T10:01:32,805   copying kage/negative_binomial_model.py -> build/lib/kage
2021-12-01T10:01:32,821   installing to build/bdist.linux-armv7l/wheel
2021-12-01T10:01:32,822   running install
2021-12-01T10:01:32,823   running install_lib
2021-12-01T10:01:32,832   creating build/bdist.linux-armv7l
2021-12-01T10:01:32,832   creating build/bdist.linux-armv7l/wheel
2021-12-01T10:01:32,837   creating build/bdist.linux-armv7l/wheel/kage
2021-12-01T10:01:32,839   copying build/lib/kage/command_line_interface.py -> build/bdist.linux-armv7l/wheel/kage
2021-12-01T10:01:32,848   copying build/lib/kage/variant_kmer_analyser.py -> build/bdist.linux-armv7l/wheel/kage
2021-12-01T10:01:32,853   copying build/lib/kage/test.py -> build/bdist.linux-armv7l/wheel/kage
2021-12-01T10:01:32,859   copying build/lib/kage/util.py -> build/bdist.linux-armv7l/wheel/kage
2021-12-01T10:01:32,864   copying build/lib/kage/genotyper.py -> build/bdist.linux-armv7l/wheel/kage
2021-12-01T10:01:32,871   copying build/lib/kage/analysis.py -> build/bdist.linux-armv7l/wheel/kage
2021-12-01T10:01:32,879   copying build/lib/kage/variant_filtering.py -> build/bdist.linux-armv7l/wheel/kage
2021-12-01T10:01:32,884   copying build/lib/kage/models.py -> build/bdist.linux-armv7l/wheel/kage
2021-12-01T10:01:32,890   copying build/lib/kage/node_counts.py -> build/bdist.linux-armv7l/wheel/kage
2021-12-01T10:01:32,896   copying build/lib/kage/index_bundle.py -> build/bdist.linux-armv7l/wheel/kage
2021-12-01T10:01:32,901   copying build/lib/kage/__init__.py -> build/bdist.linux-armv7l/wheel/kage
2021-12-01T10:01:32,906   copying build/lib/kage/combination_model_genotyper.py -> build/bdist.linux-armv7l/wheel/kage
2021-12-01T10:01:32,912   copying build/lib/kage/combomodel.py -> build/bdist.linux-armv7l/wheel/kage
2021-12-01T10:01:32,917   copying build/lib/kage/helper_index.py -> build/bdist.linux-armv7l/wheel/kage
2021-12-01T10:01:32,922   copying build/lib/kage/node_count_model.py -> build/bdist.linux-armv7l/wheel/kage
2021-12-01T10:01:32,928   copying build/lib/kage/joint_distribution.py -> build/bdist.linux-armv7l/wheel/kage
2021-12-01T10:01:32,933   copying build/lib/kage/numpy_genotyper.py -> build/bdist.linux-armv7l/wheel/kage
2021-12-01T10:01:32,940   copying build/lib/kage/simulation.py -> build/bdist.linux-armv7l/wheel/kage
2021-12-01T10:01:32,947   copying build/lib/kage/reference_kmers.py -> build/bdist.linux-armv7l/wheel/kage
2021-12-01T10:01:32,952   copying build/lib/kage/helper_index_using_duplicate_counts.py -> build/bdist.linux-armv7l/wheel/kage
2021-12-01T10:01:32,956   copying build/lib/kage/bayes_genotyper.py -> build/bdist.linux-armv7l/wheel/kage
2021-12-01T10:01:32,960   copying build/lib/kage/reads.py -> build/bdist.linux-armv7l/wheel/kage
2021-12-01T10:01:32,965   copying build/lib/kage/negative_binomial_model.py -> build/bdist.linux-armv7l/wheel/kage
2021-12-01T10:01:32,969   running install_egg_info
2021-12-01T10:01:33,024   running egg_info
2021-12-01T10:01:33,026   writing top-level names to kage_genotyper.egg-info/top_level.txt
2021-12-01T10:01:33,028   writing dependency_links to kage_genotyper.egg-info/dependency_links.txt
2021-12-01T10:01:33,032   writing kage_genotyper.egg-info/PKG-INFO
2021-12-01T10:01:33,035   writing requirements to kage_genotyper.egg-info/requires.txt
2021-12-01T10:01:33,038   writing entry points to kage_genotyper.egg-info/entry_points.txt
2021-12-01T10:01:33,049   reading manifest file 'kage_genotyper.egg-info/SOURCES.txt'
2021-12-01T10:01:33,062   writing manifest file 'kage_genotyper.egg-info/SOURCES.txt'
2021-12-01T10:01:33,065   Copying kage_genotyper.egg-info to build/bdist.linux-armv7l/wheel/kage_genotyper-0.0.6-py3.5.egg-info
2021-12-01T10:01:33,099   running install_scripts
2021-12-01T10:01:33,301   creating build/bdist.linux-armv7l/wheel/kage_genotyper-0.0.6.dist-info/WHEEL
2021-12-01T10:01:33,599   Building wheel for kage-genotyper (setup.py): finished with status 'done'
2021-12-01T10:01:33,604   Created wheel for kage-genotyper: filename=kage_genotyper-0.0.6-py3-none-any.whl size=39741 sha256=7f26289022b49cd9611615aa9f542bea798b0827f5df45e23c5d65148fb2f169
2021-12-01T10:01:33,604   Stored in directory: /tmp/pip-ephem-wheel-cache-z3s919fv/wheels/52/af/ca/5be33592564dbe01816203918bf0ec452181485caeac000f3c
2021-12-01T10:01:33,623 Successfully built kage-genotyper
2021-12-01T10:01:33,635 Removed build tracker: '/tmp/pip-req-tracker-v49jhinp'