2021-12-02T13:50:20,352 Created temporary directory: /tmp/pip-ephem-wheel-cache-pvzs3tvx
2021-12-02T13:50:20,359 Created temporary directory: /tmp/pip-req-tracker-793uffkh
2021-12-02T13:50:20,360 Initialized build tracking at /tmp/pip-req-tracker-793uffkh
2021-12-02T13:50:20,360 Created build tracker: /tmp/pip-req-tracker-793uffkh
2021-12-02T13:50:20,360 Entered build tracker: /tmp/pip-req-tracker-793uffkh
2021-12-02T13:50:20,362 Created temporary directory: /tmp/pip-wheel-65l47mmq
2021-12-02T13:50:20,433 Looking in indexes: https://pypi.org/simple, https://www.piwheels.org/simple
2021-12-02T13:50:20,436 2 location(s) to search for versions of kage-genotyper:
2021-12-02T13:50:20,436 * https://pypi.org/simple/kage-genotyper/
2021-12-02T13:50:20,436 * https://www.piwheels.org/simple/kage-genotyper/
2021-12-02T13:50:20,437 Fetching project page and analyzing links: https://pypi.org/simple/kage-genotyper/
2021-12-02T13:50:20,439 Getting page https://pypi.org/simple/kage-genotyper/
2021-12-02T13:50:20,443 Found index url https://pypi.org/simple
2021-12-02T13:50:20,784   Found link https://files.pythonhosted.org/packages/e7/66/016860668992a70bab9c872c5032fbc34e2f9ecc6936b95b4e9a0b0c812b/kage-genotyper-0.0.2.tar.gz#sha256=54ba5a094a15547344c88bd7063e22c9d932bbf7eacfbc8588a83d8b9b42dfc1 (from https://pypi.org/simple/kage-genotyper/), version: 0.0.2
2021-12-02T13:50:20,786   Found link https://files.pythonhosted.org/packages/80/ee/e08c95ccb0c401cfb2049e7271acdcb455196900f035e0700f6229d6c25d/kage-genotyper-0.0.3.tar.gz#sha256=727bf1ff9880dea8e8fe1a2aa5da4d0797fd5f64d75eda6a1ec53be5caa7d9f3 (from https://pypi.org/simple/kage-genotyper/), version: 0.0.3
2021-12-02T13:50:20,787   Found link https://files.pythonhosted.org/packages/47/5d/a155072db4e4e73f1a7b0f115f4641172458ef39411234990de2601e453a/kage-genotyper-0.0.4.tar.gz#sha256=d4316597d56b72c41623b03f06ed0fcacdfe0e301ad49d49fadcfd41e1f881f6 (from https://pypi.org/simple/kage-genotyper/), version: 0.0.4
2021-12-02T13:50:20,787   Found link https://files.pythonhosted.org/packages/9d/e0/92cb3c9de8704e94d12b1d13eee089389ba0b8cdeb5f7606e82357615039/kage-genotyper-0.0.5.tar.gz#sha256=78c0fdef5e5cf0ee401e5188dece6e297c3e20c3d72aa355c86426149d31819f (from https://pypi.org/simple/kage-genotyper/), version: 0.0.5
2021-12-02T13:50:20,788   Found link https://files.pythonhosted.org/packages/98/56/5a01b760b477d84f2e0d4284563b1a49d4c7af720ce16d8fe35273e43659/kage-genotyper-0.0.6.tar.gz#sha256=ddc00d681b1ff98043bf087216c44681f6dc8dbfad4d327a2775f3eec6937fae (from https://pypi.org/simple/kage-genotyper/), version: 0.0.6
2021-12-02T13:50:20,789   Found link https://files.pythonhosted.org/packages/62/2f/3fff47b02ebb52b577de8ff09e20d158d6796d577ab450cdee96f698915c/kage-genotyper-0.0.7.tar.gz#sha256=0a9471a1138b797df060c5aa9e7a8761e6282c5b0361432c8dcfbd168cbc15ce (from https://pypi.org/simple/kage-genotyper/), version: 0.0.7
2021-12-02T13:50:20,790 Fetching project page and analyzing links: https://www.piwheels.org/simple/kage-genotyper/
2021-12-02T13:50:20,790 Getting page https://www.piwheels.org/simple/kage-genotyper/
2021-12-02T13:50:20,793 Found index url https://www.piwheels.org/simple
2021-12-02T13:50:21,011   Skipping link: No binaries permitted for kage-genotyper: https://www.piwheels.org/simple/kage-genotyper/kage_genotyper-0.0.3-py3-none-any.whl#sha256=7d52b7bdc251d8fa41b2627126137f9c9d6b34e76dcc9d8c85de8d0d42f6bf33 (from https://www.piwheels.org/simple/kage-genotyper/)
2021-12-02T13:50:21,012   Skipping link: No binaries permitted for kage-genotyper: https://www.piwheels.org/simple/kage-genotyper/kage_genotyper-0.0.4-py3-none-any.whl#sha256=a279c71d67ea133f1cf0818eb5c559c97e5f2460cc45aba044dd17abf30d6446 (from https://www.piwheels.org/simple/kage-genotyper/)
2021-12-02T13:50:21,013   Skipping link: No binaries permitted for kage-genotyper: https://www.piwheels.org/simple/kage-genotyper/kage_genotyper-0.0.5-py3-none-any.whl#sha256=dbca21ae8964d1bf38306442e517c6b17b688a29519f7675082be82135c4c98f (from https://www.piwheels.org/simple/kage-genotyper/)
2021-12-02T13:50:21,013   Skipping link: No binaries permitted for kage-genotyper: https://www.piwheels.org/simple/kage-genotyper/kage_genotyper-0.0.6-py3-none-any.whl#sha256=7f26289022b49cd9611615aa9f542bea798b0827f5df45e23c5d65148fb2f169 (from https://www.piwheels.org/simple/kage-genotyper/)
2021-12-02T13:50:21,046 Given no hashes to check 1 links for project 'kage-genotyper': discarding no candidates
2021-12-02T13:50:21,078 Collecting kage-genotyper==0.0.7
2021-12-02T13:50:21,082   Created temporary directory: /tmp/pip-unpack-x6a0vvzu
2021-12-02T13:50:21,318   Downloading kage-genotyper-0.0.7.tar.gz (32 kB)
2021-12-02T13:50:21,545   Added kage-genotyper==0.0.7 from https://files.pythonhosted.org/packages/62/2f/3fff47b02ebb52b577de8ff09e20d158d6796d577ab450cdee96f698915c/kage-genotyper-0.0.7.tar.gz#sha256=0a9471a1138b797df060c5aa9e7a8761e6282c5b0361432c8dcfbd168cbc15ce to build tracker '/tmp/pip-req-tracker-793uffkh'
2021-12-02T13:50:21,547     Running setup.py (path:/tmp/pip-wheel-65l47mmq/kage-genotyper_95b0e4f0cc884e519ec558b519857695/setup.py) egg_info for package kage-genotyper
2021-12-02T13:50:21,548     Created temporary directory: /tmp/pip-pip-egg-info-s9xaqjm8
2021-12-02T13:50:21,549     Running command python setup.py egg_info
2021-12-02T13:50:23,669     running egg_info
2021-12-02T13:50:23,675     creating /tmp/pip-pip-egg-info-s9xaqjm8/kage_genotyper.egg-info
2021-12-02T13:50:23,678     writing /tmp/pip-pip-egg-info-s9xaqjm8/kage_genotyper.egg-info/PKG-INFO
2021-12-02T13:50:23,684     writing entry points to /tmp/pip-pip-egg-info-s9xaqjm8/kage_genotyper.egg-info/entry_points.txt
2021-12-02T13:50:23,686     writing top-level names to /tmp/pip-pip-egg-info-s9xaqjm8/kage_genotyper.egg-info/top_level.txt
2021-12-02T13:50:23,689     writing dependency_links to /tmp/pip-pip-egg-info-s9xaqjm8/kage_genotyper.egg-info/dependency_links.txt
2021-12-02T13:50:23,691     writing requirements to /tmp/pip-pip-egg-info-s9xaqjm8/kage_genotyper.egg-info/requires.txt
2021-12-02T13:50:23,694     writing manifest file '/tmp/pip-pip-egg-info-s9xaqjm8/kage_genotyper.egg-info/SOURCES.txt'
2021-12-02T13:50:24,056     reading manifest file '/tmp/pip-pip-egg-info-s9xaqjm8/kage_genotyper.egg-info/SOURCES.txt'
2021-12-02T13:50:24,065     writing manifest file '/tmp/pip-pip-egg-info-s9xaqjm8/kage_genotyper.egg-info/SOURCES.txt'
2021-12-02T13:50:24,198   Source in /tmp/pip-wheel-65l47mmq/kage-genotyper_95b0e4f0cc884e519ec558b519857695 has version 0.0.7, which satisfies requirement kage-genotyper==0.0.7 from https://files.pythonhosted.org/packages/62/2f/3fff47b02ebb52b577de8ff09e20d158d6796d577ab450cdee96f698915c/kage-genotyper-0.0.7.tar.gz#sha256=0a9471a1138b797df060c5aa9e7a8761e6282c5b0361432c8dcfbd168cbc15ce
2021-12-02T13:50:24,199   Removed kage-genotyper==0.0.7 from https://files.pythonhosted.org/packages/62/2f/3fff47b02ebb52b577de8ff09e20d158d6796d577ab450cdee96f698915c/kage-genotyper-0.0.7.tar.gz#sha256=0a9471a1138b797df060c5aa9e7a8761e6282c5b0361432c8dcfbd168cbc15ce from build tracker '/tmp/pip-req-tracker-793uffkh'
2021-12-02T13:50:24,207 Created temporary directory: /tmp/pip-unpack-901tmawo
2021-12-02T13:50:24,208 Building wheels for collected packages: kage-genotyper
2021-12-02T13:50:24,217   Created temporary directory: /tmp/pip-wheel-u7hxiu8u
2021-12-02T13:50:24,218   Building wheel for kage-genotyper (setup.py): started
2021-12-02T13:50:24,219   Destination directory: /tmp/pip-wheel-u7hxiu8u
2021-12-02T13:50:24,219   Running command /usr/bin/python3 -u -c 'import sys, setuptools, tokenize; sys.argv[0] = '"'"'/tmp/pip-wheel-65l47mmq/kage-genotyper_95b0e4f0cc884e519ec558b519857695/setup.py'"'"'; __file__='"'"'/tmp/pip-wheel-65l47mmq/kage-genotyper_95b0e4f0cc884e519ec558b519857695/setup.py'"'"';f=getattr(tokenize, '"'"'open'"'"', open)(__file__);code=f.read().replace('"'"'\r\n'"'"', '"'"'\n'"'"');f.close();exec(compile(code, __file__, '"'"'exec'"'"'))' bdist_wheel -d /tmp/pip-wheel-u7hxiu8u
2021-12-02T13:50:26,323   running bdist_wheel
2021-12-02T13:50:26,339   running build
2021-12-02T13:50:26,340   running build_py
2021-12-02T13:50:26,680   creating build
2021-12-02T13:50:26,680   creating build/lib
2021-12-02T13:50:26,682   creating build/lib/kage
2021-12-02T13:50:26,685   copying kage/numpy_genotyper.py -> build/lib/kage
2021-12-02T13:50:26,691   copying kage/node_counts.py -> build/lib/kage
2021-12-02T13:50:26,695   copying kage/helper_index_using_duplicate_counts.py -> build/lib/kage
2021-12-02T13:50:26,699   copying kage/helper_index.py -> build/lib/kage
2021-12-02T13:50:26,706   copying kage/joint_distribution.py -> build/lib/kage
2021-12-02T13:50:26,711   copying kage/variant_kmer_analyser.py -> build/lib/kage
2021-12-02T13:50:26,717   copying kage/command_line_interface.py -> build/lib/kage
2021-12-02T13:50:26,726   copying kage/util.py -> build/lib/kage
2021-12-02T13:50:26,731   copying kage/simulation.py -> build/lib/kage
2021-12-02T13:50:26,741   copying kage/tricky_variants.py -> build/lib/kage
2021-12-02T13:50:26,746   copying kage/variant_filtering.py -> build/lib/kage
2021-12-02T13:50:26,751   copying kage/genotyper.py -> build/lib/kage
2021-12-02T13:50:26,759   copying kage/test.py -> build/lib/kage
2021-12-02T13:50:26,763   copying kage/__init__.py -> build/lib/kage
2021-12-02T13:50:26,767   copying kage/negative_binomial_model.py -> build/lib/kage
2021-12-02T13:50:26,771   copying kage/bayes_genotyper.py -> build/lib/kage
2021-12-02T13:50:26,775   copying kage/models.py -> build/lib/kage
2021-12-02T13:50:26,779   copying kage/analysis.py -> build/lib/kage
2021-12-02T13:50:26,787   copying kage/reference_kmers.py -> build/lib/kage
2021-12-02T13:50:26,792   copying kage/node_count_model.py -> build/lib/kage
2021-12-02T13:50:26,799   copying kage/reads.py -> build/lib/kage
2021-12-02T13:50:26,804   copying kage/combomodel.py -> build/lib/kage
2021-12-02T13:50:26,809   copying kage/combination_model_genotyper.py -> build/lib/kage
2021-12-02T13:50:26,814   copying kage/index_bundle.py -> build/lib/kage
2021-12-02T13:50:26,828   installing to build/bdist.linux-armv7l/wheel
2021-12-02T13:50:26,829   running install
2021-12-02T13:50:26,831   running install_lib
2021-12-02T13:50:26,839   creating build/bdist.linux-armv7l
2021-12-02T13:50:26,840   creating build/bdist.linux-armv7l/wheel
2021-12-02T13:50:26,845   creating build/bdist.linux-armv7l/wheel/kage
2021-12-02T13:50:26,847   copying build/lib/kage/numpy_genotyper.py -> build/bdist.linux-armv7l/wheel/kage
2021-12-02T13:50:26,853   copying build/lib/kage/node_counts.py -> build/bdist.linux-armv7l/wheel/kage
2021-12-02T13:50:26,857   copying build/lib/kage/helper_index_using_duplicate_counts.py -> build/bdist.linux-armv7l/wheel/kage
2021-12-02T13:50:26,861   copying build/lib/kage/helper_index.py -> build/bdist.linux-armv7l/wheel/kage
2021-12-02T13:50:26,868   copying build/lib/kage/joint_distribution.py -> build/bdist.linux-armv7l/wheel/kage
2021-12-02T13:50:26,873   copying build/lib/kage/variant_kmer_analyser.py -> build/bdist.linux-armv7l/wheel/kage
2021-12-02T13:50:26,879   copying build/lib/kage/command_line_interface.py -> build/bdist.linux-armv7l/wheel/kage
2021-12-02T13:50:26,888   copying build/lib/kage/util.py -> build/bdist.linux-armv7l/wheel/kage
2021-12-02T13:50:26,894   copying build/lib/kage/simulation.py -> build/bdist.linux-armv7l/wheel/kage
2021-12-02T13:50:26,901   copying build/lib/kage/tricky_variants.py -> build/bdist.linux-armv7l/wheel/kage
2021-12-02T13:50:26,906   copying build/lib/kage/variant_filtering.py -> build/bdist.linux-armv7l/wheel/kage
2021-12-02T13:50:26,912   copying build/lib/kage/genotyper.py -> build/bdist.linux-armv7l/wheel/kage
2021-12-02T13:50:26,919   copying build/lib/kage/test.py -> build/bdist.linux-armv7l/wheel/kage
2021-12-02T13:50:26,924   copying build/lib/kage/__init__.py -> build/bdist.linux-armv7l/wheel/kage
2021-12-02T13:50:26,930   copying build/lib/kage/negative_binomial_model.py -> build/bdist.linux-armv7l/wheel/kage
2021-12-02T13:50:26,936   copying build/lib/kage/bayes_genotyper.py -> build/bdist.linux-armv7l/wheel/kage
2021-12-02T13:50:26,942   copying build/lib/kage/models.py -> build/bdist.linux-armv7l/wheel/kage
2021-12-02T13:50:26,948   copying build/lib/kage/analysis.py -> build/bdist.linux-armv7l/wheel/kage
2021-12-02T13:50:26,955   copying build/lib/kage/reference_kmers.py -> build/bdist.linux-armv7l/wheel/kage
2021-12-02T13:50:26,961   copying build/lib/kage/node_count_model.py -> build/bdist.linux-armv7l/wheel/kage
2021-12-02T13:50:26,968   copying build/lib/kage/reads.py -> build/bdist.linux-armv7l/wheel/kage
2021-12-02T13:50:26,974   copying build/lib/kage/combomodel.py -> build/bdist.linux-armv7l/wheel/kage
2021-12-02T13:50:26,981   copying build/lib/kage/combination_model_genotyper.py -> build/bdist.linux-armv7l/wheel/kage
2021-12-02T13:50:26,988   copying build/lib/kage/index_bundle.py -> build/bdist.linux-armv7l/wheel/kage
2021-12-02T13:50:26,992   running install_egg_info
2021-12-02T13:50:27,042   running egg_info
2021-12-02T13:50:27,044   writing entry points to kage_genotyper.egg-info/entry_points.txt
2021-12-02T13:50:27,047   writing dependency_links to kage_genotyper.egg-info/dependency_links.txt
2021-12-02T13:50:27,050   writing requirements to kage_genotyper.egg-info/requires.txt
2021-12-02T13:50:27,052   writing kage_genotyper.egg-info/PKG-INFO
2021-12-02T13:50:27,057   writing top-level names to kage_genotyper.egg-info/top_level.txt
2021-12-02T13:50:27,068   reading manifest file 'kage_genotyper.egg-info/SOURCES.txt'
2021-12-02T13:50:27,081   writing manifest file 'kage_genotyper.egg-info/SOURCES.txt'
2021-12-02T13:50:27,084   Copying kage_genotyper.egg-info to build/bdist.linux-armv7l/wheel/kage_genotyper-0.0.7-py3.5.egg-info
2021-12-02T13:50:27,120   running install_scripts
2021-12-02T13:50:27,335   creating build/bdist.linux-armv7l/wheel/kage_genotyper-0.0.7.dist-info/WHEEL
2021-12-02T13:50:27,647   Building wheel for kage-genotyper (setup.py): finished with status 'done'
2021-12-02T13:50:27,652   Created wheel for kage-genotyper: filename=kage_genotyper-0.0.7-py3-none-any.whl size=40970 sha256=6c45550e73562e3543e4dedf63f5e42897169f62a701603f2c4a460ac1e0b5fa
2021-12-02T13:50:27,653   Stored in directory: /tmp/pip-ephem-wheel-cache-pvzs3tvx/wheels/e8/56/ee/0d7a5a0fa153874481464862034aee966b19b4b7a2a48f8867
2021-12-02T13:50:27,673 Successfully built kage-genotyper
2021-12-02T13:50:27,685 Removed build tracker: '/tmp/pip-req-tracker-793uffkh'