2021-12-02T22:14:35,937 Created temporary directory: /tmp/pip-ephem-wheel-cache-w3p2bovc
2021-12-02T22:14:35,943 Created temporary directory: /tmp/pip-req-tracker-l24dqwda
2021-12-02T22:14:35,944 Initialized build tracking at /tmp/pip-req-tracker-l24dqwda
2021-12-02T22:14:35,944 Created build tracker: /tmp/pip-req-tracker-l24dqwda
2021-12-02T22:14:35,945 Entered build tracker: /tmp/pip-req-tracker-l24dqwda
2021-12-02T22:14:35,946 Created temporary directory: /tmp/pip-wheel-i3h1oq3e
2021-12-02T22:14:36,002 Looking in indexes: https://pypi.org/simple, https://www.piwheels.org/simple
2021-12-02T22:14:36,006 2 location(s) to search for versions of kage-genotyper:
2021-12-02T22:14:36,006 * https://pypi.org/simple/kage-genotyper/
2021-12-02T22:14:36,006 * https://www.piwheels.org/simple/kage-genotyper/
2021-12-02T22:14:36,006 Fetching project page and analyzing links: https://pypi.org/simple/kage-genotyper/
2021-12-02T22:14:36,009 Getting page https://pypi.org/simple/kage-genotyper/
2021-12-02T22:14:36,013 Found index url https://pypi.org/simple
2021-12-02T22:14:36,340   Found link https://files.pythonhosted.org/packages/e7/66/016860668992a70bab9c872c5032fbc34e2f9ecc6936b95b4e9a0b0c812b/kage-genotyper-0.0.2.tar.gz#sha256=54ba5a094a15547344c88bd7063e22c9d932bbf7eacfbc8588a83d8b9b42dfc1 (from https://pypi.org/simple/kage-genotyper/), version: 0.0.2
2021-12-02T22:14:36,341   Found link https://files.pythonhosted.org/packages/80/ee/e08c95ccb0c401cfb2049e7271acdcb455196900f035e0700f6229d6c25d/kage-genotyper-0.0.3.tar.gz#sha256=727bf1ff9880dea8e8fe1a2aa5da4d0797fd5f64d75eda6a1ec53be5caa7d9f3 (from https://pypi.org/simple/kage-genotyper/), version: 0.0.3
2021-12-02T22:14:36,342   Found link https://files.pythonhosted.org/packages/47/5d/a155072db4e4e73f1a7b0f115f4641172458ef39411234990de2601e453a/kage-genotyper-0.0.4.tar.gz#sha256=d4316597d56b72c41623b03f06ed0fcacdfe0e301ad49d49fadcfd41e1f881f6 (from https://pypi.org/simple/kage-genotyper/), version: 0.0.4
2021-12-02T22:14:36,343   Found link https://files.pythonhosted.org/packages/9d/e0/92cb3c9de8704e94d12b1d13eee089389ba0b8cdeb5f7606e82357615039/kage-genotyper-0.0.5.tar.gz#sha256=78c0fdef5e5cf0ee401e5188dece6e297c3e20c3d72aa355c86426149d31819f (from https://pypi.org/simple/kage-genotyper/), version: 0.0.5
2021-12-02T22:14:36,344   Found link https://files.pythonhosted.org/packages/98/56/5a01b760b477d84f2e0d4284563b1a49d4c7af720ce16d8fe35273e43659/kage-genotyper-0.0.6.tar.gz#sha256=ddc00d681b1ff98043bf087216c44681f6dc8dbfad4d327a2775f3eec6937fae (from https://pypi.org/simple/kage-genotyper/), version: 0.0.6
2021-12-02T22:14:36,345   Found link https://files.pythonhosted.org/packages/62/2f/3fff47b02ebb52b577de8ff09e20d158d6796d577ab450cdee96f698915c/kage-genotyper-0.0.7.tar.gz#sha256=0a9471a1138b797df060c5aa9e7a8761e6282c5b0361432c8dcfbd168cbc15ce (from https://pypi.org/simple/kage-genotyper/), version: 0.0.7
2021-12-02T22:14:36,346   Found link https://files.pythonhosted.org/packages/52/b9/4e0cdf90c6fdee475a81d9eb47e8313937d68047a26314a6f4106b1f2f1d/kage-genotyper-0.0.8.tar.gz#sha256=11f2cd7f4adb9bb782dfaa359e8262b8f9616efc326e6d78f3608deabc81b0ea (from https://pypi.org/simple/kage-genotyper/), version: 0.0.8
2021-12-02T22:14:36,347 Fetching project page and analyzing links: https://www.piwheels.org/simple/kage-genotyper/
2021-12-02T22:14:36,348 Getting page https://www.piwheels.org/simple/kage-genotyper/
2021-12-02T22:14:36,350 Found index url https://www.piwheels.org/simple
2021-12-02T22:14:36,589   Skipping link: No binaries permitted for kage-genotyper: https://www.piwheels.org/simple/kage-genotyper/kage_genotyper-0.0.3-py3-none-any.whl#sha256=7d52b7bdc251d8fa41b2627126137f9c9d6b34e76dcc9d8c85de8d0d42f6bf33 (from https://www.piwheels.org/simple/kage-genotyper/)
2021-12-02T22:14:36,590   Skipping link: No binaries permitted for kage-genotyper: https://www.piwheels.org/simple/kage-genotyper/kage_genotyper-0.0.4-py3-none-any.whl#sha256=a279c71d67ea133f1cf0818eb5c559c97e5f2460cc45aba044dd17abf30d6446 (from https://www.piwheels.org/simple/kage-genotyper/)
2021-12-02T22:14:36,590   Skipping link: No binaries permitted for kage-genotyper: https://www.piwheels.org/simple/kage-genotyper/kage_genotyper-0.0.5-py3-none-any.whl#sha256=dbca21ae8964d1bf38306442e517c6b17b688a29519f7675082be82135c4c98f (from https://www.piwheels.org/simple/kage-genotyper/)
2021-12-02T22:14:36,591   Skipping link: No binaries permitted for kage-genotyper: https://www.piwheels.org/simple/kage-genotyper/kage_genotyper-0.0.6-py3-none-any.whl#sha256=7f26289022b49cd9611615aa9f542bea798b0827f5df45e23c5d65148fb2f169 (from https://www.piwheels.org/simple/kage-genotyper/)
2021-12-02T22:14:36,592   Skipping link: No binaries permitted for kage-genotyper: https://www.piwheels.org/simple/kage-genotyper/kage_genotyper-0.0.7-py3-none-any.whl#sha256=6c45550e73562e3543e4dedf63f5e42897169f62a701603f2c4a460ac1e0b5fa (from https://www.piwheels.org/simple/kage-genotyper/)
2021-12-02T22:14:36,624 Given no hashes to check 1 links for project 'kage-genotyper': discarding no candidates
2021-12-02T22:14:36,656 Collecting kage-genotyper==0.0.8
2021-12-02T22:14:36,659   Created temporary directory: /tmp/pip-unpack-iwiwehx_
2021-12-02T22:14:36,895   Downloading kage-genotyper-0.0.8.tar.gz (31 kB)
2021-12-02T22:14:37,118   Added kage-genotyper==0.0.8 from https://files.pythonhosted.org/packages/52/b9/4e0cdf90c6fdee475a81d9eb47e8313937d68047a26314a6f4106b1f2f1d/kage-genotyper-0.0.8.tar.gz#sha256=11f2cd7f4adb9bb782dfaa359e8262b8f9616efc326e6d78f3608deabc81b0ea to build tracker '/tmp/pip-req-tracker-l24dqwda'
2021-12-02T22:14:37,121     Running setup.py (path:/tmp/pip-wheel-i3h1oq3e/kage-genotyper_5d30d1f0be7441c295ef5d64e4322257/setup.py) egg_info for package kage-genotyper
2021-12-02T22:14:37,122     Created temporary directory: /tmp/pip-pip-egg-info-22kilx_d
2021-12-02T22:14:37,123     Running command python setup.py egg_info
2021-12-02T22:14:39,054     running egg_info
2021-12-02T22:14:39,060     creating /tmp/pip-pip-egg-info-22kilx_d/kage_genotyper.egg-info
2021-12-02T22:14:39,062     writing dependency_links to /tmp/pip-pip-egg-info-22kilx_d/kage_genotyper.egg-info/dependency_links.txt
2021-12-02T22:14:39,065     writing requirements to /tmp/pip-pip-egg-info-22kilx_d/kage_genotyper.egg-info/requires.txt
2021-12-02T22:14:39,067     writing /tmp/pip-pip-egg-info-22kilx_d/kage_genotyper.egg-info/PKG-INFO
2021-12-02T22:14:39,073     writing top-level names to /tmp/pip-pip-egg-info-22kilx_d/kage_genotyper.egg-info/top_level.txt
2021-12-02T22:14:39,076     writing entry points to /tmp/pip-pip-egg-info-22kilx_d/kage_genotyper.egg-info/entry_points.txt
2021-12-02T22:14:39,079     writing manifest file '/tmp/pip-pip-egg-info-22kilx_d/kage_genotyper.egg-info/SOURCES.txt'
2021-12-02T22:14:39,435     reading manifest file '/tmp/pip-pip-egg-info-22kilx_d/kage_genotyper.egg-info/SOURCES.txt'
2021-12-02T22:14:39,445     writing manifest file '/tmp/pip-pip-egg-info-22kilx_d/kage_genotyper.egg-info/SOURCES.txt'
2021-12-02T22:14:39,579   Source in /tmp/pip-wheel-i3h1oq3e/kage-genotyper_5d30d1f0be7441c295ef5d64e4322257 has version 0.0.8, which satisfies requirement kage-genotyper==0.0.8 from https://files.pythonhosted.org/packages/52/b9/4e0cdf90c6fdee475a81d9eb47e8313937d68047a26314a6f4106b1f2f1d/kage-genotyper-0.0.8.tar.gz#sha256=11f2cd7f4adb9bb782dfaa359e8262b8f9616efc326e6d78f3608deabc81b0ea
2021-12-02T22:14:39,580   Removed kage-genotyper==0.0.8 from https://files.pythonhosted.org/packages/52/b9/4e0cdf90c6fdee475a81d9eb47e8313937d68047a26314a6f4106b1f2f1d/kage-genotyper-0.0.8.tar.gz#sha256=11f2cd7f4adb9bb782dfaa359e8262b8f9616efc326e6d78f3608deabc81b0ea from build tracker '/tmp/pip-req-tracker-l24dqwda'
2021-12-02T22:14:39,589 Created temporary directory: /tmp/pip-unpack-i3jw2nts
2021-12-02T22:14:39,590 Building wheels for collected packages: kage-genotyper
2021-12-02T22:14:39,598   Created temporary directory: /tmp/pip-wheel-k7a_h_5z
2021-12-02T22:14:39,599   Building wheel for kage-genotyper (setup.py): started
2021-12-02T22:14:39,600   Destination directory: /tmp/pip-wheel-k7a_h_5z
2021-12-02T22:14:39,600   Running command /usr/bin/python3 -u -c 'import sys, setuptools, tokenize; sys.argv[0] = '"'"'/tmp/pip-wheel-i3h1oq3e/kage-genotyper_5d30d1f0be7441c295ef5d64e4322257/setup.py'"'"'; __file__='"'"'/tmp/pip-wheel-i3h1oq3e/kage-genotyper_5d30d1f0be7441c295ef5d64e4322257/setup.py'"'"';f=getattr(tokenize, '"'"'open'"'"', open)(__file__);code=f.read().replace('"'"'\r\n'"'"', '"'"'\n'"'"');f.close();exec(compile(code, __file__, '"'"'exec'"'"'))' bdist_wheel -d /tmp/pip-wheel-k7a_h_5z
2021-12-02T22:14:41,523   running bdist_wheel
2021-12-02T22:14:41,538   running build
2021-12-02T22:14:41,539   running build_py
2021-12-02T22:14:41,874   creating build
2021-12-02T22:14:41,875   creating build/lib
2021-12-02T22:14:41,877   creating build/lib/kage
2021-12-02T22:14:41,879   copying kage/genotyper.py -> build/lib/kage
2021-12-02T22:14:41,885   copying kage/test.py -> build/lib/kage
2021-12-02T22:14:41,889   copying kage/tricky_variants.py -> build/lib/kage
2021-12-02T22:14:41,893   copying kage/numpy_genotyper.py -> build/lib/kage
2021-12-02T22:14:41,898   copying kage/util.py -> build/lib/kage
2021-12-02T22:14:41,902   copying kage/combination_model_genotyper.py -> build/lib/kage
2021-12-02T22:14:41,908   copying kage/reads.py -> build/lib/kage
2021-12-02T22:14:41,914   copying kage/reference_kmers.py -> build/lib/kage
2021-12-02T22:14:41,919   copying kage/helper_index.py -> build/lib/kage
2021-12-02T22:14:41,926   copying kage/node_counts.py -> build/lib/kage
2021-12-02T22:14:41,930   copying kage/combomodel.py -> build/lib/kage
2021-12-02T22:14:41,937   copying kage/node_count_model.py -> build/lib/kage
2021-12-02T22:14:41,943   copying kage/models.py -> build/lib/kage
2021-12-02T22:14:41,949   copying kage/bayes_genotyper.py -> build/lib/kage
2021-12-02T22:14:41,954   copying kage/__init__.py -> build/lib/kage
2021-12-02T22:14:41,959   copying kage/helper_index_using_duplicate_counts.py -> build/lib/kage
2021-12-02T22:14:41,964   copying kage/negative_binomial_model.py -> build/lib/kage
2021-12-02T22:14:41,968   copying kage/variant_kmer_analyser.py -> build/lib/kage
2021-12-02T22:14:41,972   copying kage/joint_distribution.py -> build/lib/kage
2021-12-02T22:14:41,975   copying kage/command_line_interface.py -> build/lib/kage
2021-12-02T22:14:41,983   copying kage/analysis.py -> build/lib/kage
2021-12-02T22:14:41,989   copying kage/simulation.py -> build/lib/kage
2021-12-02T22:14:41,996   copying kage/variant_filtering.py -> build/lib/kage
2021-12-02T22:14:42,014   installing to build/bdist.linux-armv7l/wheel
2021-12-02T22:14:42,015   running install
2021-12-02T22:14:42,017   running install_lib
2021-12-02T22:14:42,024   creating build/bdist.linux-armv7l
2021-12-02T22:14:42,024   creating build/bdist.linux-armv7l/wheel
2021-12-02T22:14:42,029   creating build/bdist.linux-armv7l/wheel/kage
2021-12-02T22:14:42,031   copying build/lib/kage/genotyper.py -> build/bdist.linux-armv7l/wheel/kage
2021-12-02T22:14:42,037   copying build/lib/kage/test.py -> build/bdist.linux-armv7l/wheel/kage
2021-12-02T22:14:42,040   copying build/lib/kage/tricky_variants.py -> build/bdist.linux-armv7l/wheel/kage
2021-12-02T22:14:42,044   copying build/lib/kage/numpy_genotyper.py -> build/bdist.linux-armv7l/wheel/kage
2021-12-02T22:14:42,050   copying build/lib/kage/util.py -> build/bdist.linux-armv7l/wheel/kage
2021-12-02T22:14:42,055   copying build/lib/kage/combination_model_genotyper.py -> build/bdist.linux-armv7l/wheel/kage
2021-12-02T22:14:42,061   copying build/lib/kage/reads.py -> build/bdist.linux-armv7l/wheel/kage
2021-12-02T22:14:42,067   copying build/lib/kage/reference_kmers.py -> build/bdist.linux-armv7l/wheel/kage
2021-12-02T22:14:42,072   copying build/lib/kage/helper_index.py -> build/bdist.linux-armv7l/wheel/kage
2021-12-02T22:14:42,078   copying build/lib/kage/node_counts.py -> build/bdist.linux-armv7l/wheel/kage
2021-12-02T22:14:42,083   copying build/lib/kage/combomodel.py -> build/bdist.linux-armv7l/wheel/kage
2021-12-02T22:14:42,090   copying build/lib/kage/node_count_model.py -> build/bdist.linux-armv7l/wheel/kage
2021-12-02T22:14:42,097   copying build/lib/kage/models.py -> build/bdist.linux-armv7l/wheel/kage
2021-12-02T22:14:42,102   copying build/lib/kage/bayes_genotyper.py -> build/bdist.linux-armv7l/wheel/kage
2021-12-02T22:14:42,107   copying build/lib/kage/__init__.py -> build/bdist.linux-armv7l/wheel/kage
2021-12-02T22:14:42,112   copying build/lib/kage/helper_index_using_duplicate_counts.py -> build/bdist.linux-armv7l/wheel/kage
2021-12-02T22:14:42,118   copying build/lib/kage/negative_binomial_model.py -> build/bdist.linux-armv7l/wheel/kage
2021-12-02T22:14:42,123   copying build/lib/kage/variant_kmer_analyser.py -> build/bdist.linux-armv7l/wheel/kage
2021-12-02T22:14:42,128   copying build/lib/kage/joint_distribution.py -> build/bdist.linux-armv7l/wheel/kage
2021-12-02T22:14:42,133   copying build/lib/kage/command_line_interface.py -> build/bdist.linux-armv7l/wheel/kage
2021-12-02T22:14:42,142   copying build/lib/kage/analysis.py -> build/bdist.linux-armv7l/wheel/kage
2021-12-02T22:14:42,150   copying build/lib/kage/simulation.py -> build/bdist.linux-armv7l/wheel/kage
2021-12-02T22:14:42,156   copying build/lib/kage/variant_filtering.py -> build/bdist.linux-armv7l/wheel/kage
2021-12-02T22:14:42,161   running install_egg_info
2021-12-02T22:14:42,209   running egg_info
2021-12-02T22:14:42,210   writing entry points to kage_genotyper.egg-info/entry_points.txt
2021-12-02T22:14:42,212   writing top-level names to kage_genotyper.egg-info/top_level.txt
2021-12-02T22:14:42,215   writing requirements to kage_genotyper.egg-info/requires.txt
2021-12-02T22:14:42,217   writing kage_genotyper.egg-info/PKG-INFO
2021-12-02T22:14:42,221   writing dependency_links to kage_genotyper.egg-info/dependency_links.txt
2021-12-02T22:14:42,232   reading manifest file 'kage_genotyper.egg-info/SOURCES.txt'
2021-12-02T22:14:42,244   writing manifest file 'kage_genotyper.egg-info/SOURCES.txt'
2021-12-02T22:14:42,247   Copying kage_genotyper.egg-info to build/bdist.linux-armv7l/wheel/kage_genotyper-0.0.8-py3.5.egg-info
2021-12-02T22:14:42,276   running install_scripts
2021-12-02T22:14:42,493   creating build/bdist.linux-armv7l/wheel/kage_genotyper-0.0.8.dist-info/WHEEL
2021-12-02T22:14:42,789   Building wheel for kage-genotyper (setup.py): finished with status 'done'
2021-12-02T22:14:42,793   Created wheel for kage-genotyper: filename=kage_genotyper-0.0.8-py3-none-any.whl size=40107 sha256=17c38eb9469806ae1d16028b61450a754b7a2e9607b63cf4cb2c1bc4cd19f562
2021-12-02T22:14:42,794   Stored in directory: /tmp/pip-ephem-wheel-cache-w3p2bovc/wheels/58/f2/50/8cf5eea26f0af6fd51a2e7b7c6c9ed3f71943e9d658b109073
2021-12-02T22:14:42,812 Successfully built kage-genotyper
2021-12-02T22:14:42,824 Removed build tracker: '/tmp/pip-req-tracker-l24dqwda'