2021-12-03T12:19:58,945 Created temporary directory: /tmp/pip-ephem-wheel-cache-fd1_webe
2021-12-03T12:19:58,951 Created temporary directory: /tmp/pip-req-tracker-905i7xjz
2021-12-03T12:19:58,952 Initialized build tracking at /tmp/pip-req-tracker-905i7xjz
2021-12-03T12:19:58,953 Created build tracker: /tmp/pip-req-tracker-905i7xjz
2021-12-03T12:19:58,953 Entered build tracker: /tmp/pip-req-tracker-905i7xjz
2021-12-03T12:19:58,955 Created temporary directory: /tmp/pip-wheel-sk44mxvj
2021-12-03T12:19:59,016 Looking in indexes: https://pypi.org/simple, https://www.piwheels.org/simple
2021-12-03T12:19:59,019 2 location(s) to search for versions of kage-genotyper:
2021-12-03T12:19:59,019 * https://pypi.org/simple/kage-genotyper/
2021-12-03T12:19:59,019 * https://www.piwheels.org/simple/kage-genotyper/
2021-12-03T12:19:59,020 Fetching project page and analyzing links: https://pypi.org/simple/kage-genotyper/
2021-12-03T12:19:59,022 Getting page https://pypi.org/simple/kage-genotyper/
2021-12-03T12:19:59,027 Found index url https://pypi.org/simple
2021-12-03T12:19:59,356   Found link https://files.pythonhosted.org/packages/e7/66/016860668992a70bab9c872c5032fbc34e2f9ecc6936b95b4e9a0b0c812b/kage-genotyper-0.0.2.tar.gz#sha256=54ba5a094a15547344c88bd7063e22c9d932bbf7eacfbc8588a83d8b9b42dfc1 (from https://pypi.org/simple/kage-genotyper/), version: 0.0.2
2021-12-03T12:19:59,357   Found link https://files.pythonhosted.org/packages/80/ee/e08c95ccb0c401cfb2049e7271acdcb455196900f035e0700f6229d6c25d/kage-genotyper-0.0.3.tar.gz#sha256=727bf1ff9880dea8e8fe1a2aa5da4d0797fd5f64d75eda6a1ec53be5caa7d9f3 (from https://pypi.org/simple/kage-genotyper/), version: 0.0.3
2021-12-03T12:19:59,358   Found link https://files.pythonhosted.org/packages/47/5d/a155072db4e4e73f1a7b0f115f4641172458ef39411234990de2601e453a/kage-genotyper-0.0.4.tar.gz#sha256=d4316597d56b72c41623b03f06ed0fcacdfe0e301ad49d49fadcfd41e1f881f6 (from https://pypi.org/simple/kage-genotyper/), version: 0.0.4
2021-12-03T12:19:59,359   Found link https://files.pythonhosted.org/packages/9d/e0/92cb3c9de8704e94d12b1d13eee089389ba0b8cdeb5f7606e82357615039/kage-genotyper-0.0.5.tar.gz#sha256=78c0fdef5e5cf0ee401e5188dece6e297c3e20c3d72aa355c86426149d31819f (from https://pypi.org/simple/kage-genotyper/), version: 0.0.5
2021-12-03T12:19:59,360   Found link https://files.pythonhosted.org/packages/98/56/5a01b760b477d84f2e0d4284563b1a49d4c7af720ce16d8fe35273e43659/kage-genotyper-0.0.6.tar.gz#sha256=ddc00d681b1ff98043bf087216c44681f6dc8dbfad4d327a2775f3eec6937fae (from https://pypi.org/simple/kage-genotyper/), version: 0.0.6
2021-12-03T12:19:59,360   Found link https://files.pythonhosted.org/packages/62/2f/3fff47b02ebb52b577de8ff09e20d158d6796d577ab450cdee96f698915c/kage-genotyper-0.0.7.tar.gz#sha256=0a9471a1138b797df060c5aa9e7a8761e6282c5b0361432c8dcfbd168cbc15ce (from https://pypi.org/simple/kage-genotyper/), version: 0.0.7
2021-12-03T12:19:59,361   Found link https://files.pythonhosted.org/packages/52/b9/4e0cdf90c6fdee475a81d9eb47e8313937d68047a26314a6f4106b1f2f1d/kage-genotyper-0.0.8.tar.gz#sha256=11f2cd7f4adb9bb782dfaa359e8262b8f9616efc326e6d78f3608deabc81b0ea (from https://pypi.org/simple/kage-genotyper/), version: 0.0.8
2021-12-03T12:19:59,362   Found link https://files.pythonhosted.org/packages/37/a0/b87d59cc79cc5ecdd5517141b7c9e29953bfea3e9272b99840e1cd9b3d97/kage-genotyper-0.0.9.tar.gz#sha256=062ad455d207590ac2c60f823dd2868cdb52324dc4d06e960cd314b3a114b6d3 (from https://pypi.org/simple/kage-genotyper/), version: 0.0.9
2021-12-03T12:19:59,363 Fetching project page and analyzing links: https://www.piwheels.org/simple/kage-genotyper/
2021-12-03T12:19:59,364 Getting page https://www.piwheels.org/simple/kage-genotyper/
2021-12-03T12:19:59,367 Found index url https://www.piwheels.org/simple
2021-12-03T12:19:59,604   Skipping link: No binaries permitted for kage-genotyper: https://www.piwheels.org/simple/kage-genotyper/kage_genotyper-0.0.3-py3-none-any.whl#sha256=7d52b7bdc251d8fa41b2627126137f9c9d6b34e76dcc9d8c85de8d0d42f6bf33 (from https://www.piwheels.org/simple/kage-genotyper/)
2021-12-03T12:19:59,605   Skipping link: No binaries permitted for kage-genotyper: https://www.piwheels.org/simple/kage-genotyper/kage_genotyper-0.0.4-py3-none-any.whl#sha256=a279c71d67ea133f1cf0818eb5c559c97e5f2460cc45aba044dd17abf30d6446 (from https://www.piwheels.org/simple/kage-genotyper/)
2021-12-03T12:19:59,606   Skipping link: No binaries permitted for kage-genotyper: https://www.piwheels.org/simple/kage-genotyper/kage_genotyper-0.0.5-py3-none-any.whl#sha256=dbca21ae8964d1bf38306442e517c6b17b688a29519f7675082be82135c4c98f (from https://www.piwheels.org/simple/kage-genotyper/)
2021-12-03T12:19:59,607   Skipping link: No binaries permitted for kage-genotyper: https://www.piwheels.org/simple/kage-genotyper/kage_genotyper-0.0.6-py3-none-any.whl#sha256=7f26289022b49cd9611615aa9f542bea798b0827f5df45e23c5d65148fb2f169 (from https://www.piwheels.org/simple/kage-genotyper/)
2021-12-03T12:19:59,607   Skipping link: No binaries permitted for kage-genotyper: https://www.piwheels.org/simple/kage-genotyper/kage_genotyper-0.0.7-py3-none-any.whl#sha256=6c45550e73562e3543e4dedf63f5e42897169f62a701603f2c4a460ac1e0b5fa (from https://www.piwheels.org/simple/kage-genotyper/)
2021-12-03T12:19:59,608   Skipping link: No binaries permitted for kage-genotyper: https://www.piwheels.org/simple/kage-genotyper/kage_genotyper-0.0.8-py3-none-any.whl#sha256=17c38eb9469806ae1d16028b61450a754b7a2e9607b63cf4cb2c1bc4cd19f562 (from https://www.piwheels.org/simple/kage-genotyper/)
2021-12-03T12:19:59,641 Given no hashes to check 1 links for project 'kage-genotyper': discarding no candidates
2021-12-03T12:19:59,673 Collecting kage-genotyper==0.0.9
2021-12-03T12:19:59,677   Created temporary directory: /tmp/pip-unpack-9ppm6bp4
2021-12-03T12:19:59,898   Downloading kage-genotyper-0.0.9.tar.gz (30 kB)
2021-12-03T12:20:00,111   Added kage-genotyper==0.0.9 from https://files.pythonhosted.org/packages/37/a0/b87d59cc79cc5ecdd5517141b7c9e29953bfea3e9272b99840e1cd9b3d97/kage-genotyper-0.0.9.tar.gz#sha256=062ad455d207590ac2c60f823dd2868cdb52324dc4d06e960cd314b3a114b6d3 to build tracker '/tmp/pip-req-tracker-905i7xjz'
2021-12-03T12:20:00,113     Running setup.py (path:/tmp/pip-wheel-sk44mxvj/kage-genotyper_7971098409d741a5a72d1b04a4790030/setup.py) egg_info for package kage-genotyper
2021-12-03T12:20:00,115     Created temporary directory: /tmp/pip-pip-egg-info-mxl2l79l
2021-12-03T12:20:00,115     Running command python setup.py egg_info
2021-12-03T12:20:02,338     running egg_info
2021-12-03T12:20:02,344     creating /tmp/pip-pip-egg-info-mxl2l79l/kage_genotyper.egg-info
2021-12-03T12:20:02,348     writing requirements to /tmp/pip-pip-egg-info-mxl2l79l/kage_genotyper.egg-info/requires.txt
2021-12-03T12:20:02,351     writing /tmp/pip-pip-egg-info-mxl2l79l/kage_genotyper.egg-info/PKG-INFO
2021-12-03T12:20:02,356     writing entry points to /tmp/pip-pip-egg-info-mxl2l79l/kage_genotyper.egg-info/entry_points.txt
2021-12-03T12:20:02,358     writing top-level names to /tmp/pip-pip-egg-info-mxl2l79l/kage_genotyper.egg-info/top_level.txt
2021-12-03T12:20:02,360     writing dependency_links to /tmp/pip-pip-egg-info-mxl2l79l/kage_genotyper.egg-info/dependency_links.txt
2021-12-03T12:20:02,363     writing manifest file '/tmp/pip-pip-egg-info-mxl2l79l/kage_genotyper.egg-info/SOURCES.txt'
2021-12-03T12:20:02,719     reading manifest file '/tmp/pip-pip-egg-info-mxl2l79l/kage_genotyper.egg-info/SOURCES.txt'
2021-12-03T12:20:02,729     writing manifest file '/tmp/pip-pip-egg-info-mxl2l79l/kage_genotyper.egg-info/SOURCES.txt'
2021-12-03T12:20:02,862   Source in /tmp/pip-wheel-sk44mxvj/kage-genotyper_7971098409d741a5a72d1b04a4790030 has version 0.0.9, which satisfies requirement kage-genotyper==0.0.9 from https://files.pythonhosted.org/packages/37/a0/b87d59cc79cc5ecdd5517141b7c9e29953bfea3e9272b99840e1cd9b3d97/kage-genotyper-0.0.9.tar.gz#sha256=062ad455d207590ac2c60f823dd2868cdb52324dc4d06e960cd314b3a114b6d3
2021-12-03T12:20:02,863   Removed kage-genotyper==0.0.9 from https://files.pythonhosted.org/packages/37/a0/b87d59cc79cc5ecdd5517141b7c9e29953bfea3e9272b99840e1cd9b3d97/kage-genotyper-0.0.9.tar.gz#sha256=062ad455d207590ac2c60f823dd2868cdb52324dc4d06e960cd314b3a114b6d3 from build tracker '/tmp/pip-req-tracker-905i7xjz'
2021-12-03T12:20:02,872 Created temporary directory: /tmp/pip-unpack-8l2n1y3m
2021-12-03T12:20:02,873 Building wheels for collected packages: kage-genotyper
2021-12-03T12:20:02,882   Created temporary directory: /tmp/pip-wheel-plwhbyor
2021-12-03T12:20:02,883   Building wheel for kage-genotyper (setup.py): started
2021-12-03T12:20:02,884   Destination directory: /tmp/pip-wheel-plwhbyor
2021-12-03T12:20:02,884   Running command /usr/bin/python3 -u -c 'import sys, setuptools, tokenize; sys.argv[0] = '"'"'/tmp/pip-wheel-sk44mxvj/kage-genotyper_7971098409d741a5a72d1b04a4790030/setup.py'"'"'; __file__='"'"'/tmp/pip-wheel-sk44mxvj/kage-genotyper_7971098409d741a5a72d1b04a4790030/setup.py'"'"';f=getattr(tokenize, '"'"'open'"'"', open)(__file__);code=f.read().replace('"'"'\r\n'"'"', '"'"'\n'"'"');f.close();exec(compile(code, __file__, '"'"'exec'"'"'))' bdist_wheel -d /tmp/pip-wheel-plwhbyor
2021-12-03T12:20:05,200   running bdist_wheel
2021-12-03T12:20:05,216   running build
2021-12-03T12:20:05,217   running build_py
2021-12-03T12:20:05,557   creating build
2021-12-03T12:20:05,558   creating build/lib
2021-12-03T12:20:05,559   creating build/lib/kage
2021-12-03T12:20:05,562   copying kage/node_counts.py -> build/lib/kage
2021-12-03T12:20:05,566   copying kage/variant_kmer_analyser.py -> build/lib/kage
2021-12-03T12:20:05,570   copying kage/analysis.py -> build/lib/kage
2021-12-03T12:20:05,576   copying kage/models.py -> build/lib/kage
2021-12-03T12:20:05,580   copying kage/joint_distribution.py -> build/lib/kage
2021-12-03T12:20:05,584   copying kage/negative_binomial_model.py -> build/lib/kage
2021-12-03T12:20:05,590   copying kage/helper_index_using_duplicate_counts.py -> build/lib/kage
2021-12-03T12:20:05,595   copying kage/combination_model_genotyper.py -> build/lib/kage
2021-12-03T12:20:05,602   copying kage/util.py -> build/lib/kage
2021-12-03T12:20:05,607   copying kage/__init__.py -> build/lib/kage
2021-12-03T12:20:05,612   copying kage/variant_filtering.py -> build/lib/kage
2021-12-03T12:20:05,617   copying kage/genotyper.py -> build/lib/kage
2021-12-03T12:20:05,625   copying kage/helper_index.py -> build/lib/kage
2021-12-03T12:20:05,631   copying kage/node_count_model.py -> build/lib/kage
2021-12-03T12:20:05,638   copying kage/numpy_genotyper.py -> build/lib/kage
2021-12-03T12:20:05,646   copying kage/simulation.py -> build/lib/kage
2021-12-03T12:20:05,652   copying kage/reads.py -> build/lib/kage
2021-12-03T12:20:05,659   copying kage/combomodel.py -> build/lib/kage
2021-12-03T12:20:05,665   copying kage/command_line_interface.py -> build/lib/kage
2021-12-03T12:20:05,675   copying kage/tricky_variants.py -> build/lib/kage
2021-12-03T12:20:05,680   copying kage/reference_kmers.py -> build/lib/kage
2021-12-03T12:20:05,704   installing to build/bdist.linux-armv7l/wheel
2021-12-03T12:20:05,705   running install
2021-12-03T12:20:05,708   running install_lib
2021-12-03T12:20:05,715   creating build/bdist.linux-armv7l
2021-12-03T12:20:05,716   creating build/bdist.linux-armv7l/wheel
2021-12-03T12:20:05,720   creating build/bdist.linux-armv7l/wheel/kage
2021-12-03T12:20:05,722   copying build/lib/kage/node_counts.py -> build/bdist.linux-armv7l/wheel/kage
2021-12-03T12:20:05,726   copying build/lib/kage/variant_kmer_analyser.py -> build/bdist.linux-armv7l/wheel/kage
2021-12-03T12:20:05,731   copying build/lib/kage/analysis.py -> build/bdist.linux-armv7l/wheel/kage
2021-12-03T12:20:05,737   copying build/lib/kage/models.py -> build/bdist.linux-armv7l/wheel/kage
2021-12-03T12:20:05,741   copying build/lib/kage/joint_distribution.py -> build/bdist.linux-armv7l/wheel/kage
2021-12-03T12:20:05,745   copying build/lib/kage/negative_binomial_model.py -> build/bdist.linux-armv7l/wheel/kage
2021-12-03T12:20:05,750   copying build/lib/kage/helper_index_using_duplicate_counts.py -> build/bdist.linux-armv7l/wheel/kage
2021-12-03T12:20:05,755   copying build/lib/kage/combination_model_genotyper.py -> build/bdist.linux-armv7l/wheel/kage
2021-12-03T12:20:05,762   copying build/lib/kage/util.py -> build/bdist.linux-armv7l/wheel/kage
2021-12-03T12:20:05,767   copying build/lib/kage/__init__.py -> build/bdist.linux-armv7l/wheel/kage
2021-12-03T12:20:05,772   copying build/lib/kage/variant_filtering.py -> build/bdist.linux-armv7l/wheel/kage
2021-12-03T12:20:05,778   copying build/lib/kage/genotyper.py -> build/bdist.linux-armv7l/wheel/kage
2021-12-03T12:20:05,785   copying build/lib/kage/helper_index.py -> build/bdist.linux-armv7l/wheel/kage
2021-12-03T12:20:05,792   copying build/lib/kage/node_count_model.py -> build/bdist.linux-armv7l/wheel/kage
2021-12-03T12:20:05,799   copying build/lib/kage/numpy_genotyper.py -> build/bdist.linux-armv7l/wheel/kage
2021-12-03T12:20:05,806   copying build/lib/kage/simulation.py -> build/bdist.linux-armv7l/wheel/kage
2021-12-03T12:20:05,813   copying build/lib/kage/reads.py -> build/bdist.linux-armv7l/wheel/kage
2021-12-03T12:20:05,819   copying build/lib/kage/combomodel.py -> build/bdist.linux-armv7l/wheel/kage
2021-12-03T12:20:05,825   copying build/lib/kage/command_line_interface.py -> build/bdist.linux-armv7l/wheel/kage
2021-12-03T12:20:05,835   copying build/lib/kage/tricky_variants.py -> build/bdist.linux-armv7l/wheel/kage
2021-12-03T12:20:05,840   copying build/lib/kage/reference_kmers.py -> build/bdist.linux-armv7l/wheel/kage
2021-12-03T12:20:05,844   running install_egg_info
2021-12-03T12:20:05,892   running egg_info
2021-12-03T12:20:05,893   writing kage_genotyper.egg-info/PKG-INFO
2021-12-03T12:20:05,897   writing entry points to kage_genotyper.egg-info/entry_points.txt
2021-12-03T12:20:05,901   writing dependency_links to kage_genotyper.egg-info/dependency_links.txt
2021-12-03T12:20:05,903   writing top-level names to kage_genotyper.egg-info/top_level.txt
2021-12-03T12:20:05,905   writing requirements to kage_genotyper.egg-info/requires.txt
2021-12-03T12:20:05,917   reading manifest file 'kage_genotyper.egg-info/SOURCES.txt'
2021-12-03T12:20:05,929   writing manifest file 'kage_genotyper.egg-info/SOURCES.txt'
2021-12-03T12:20:05,932   Copying kage_genotyper.egg-info to build/bdist.linux-armv7l/wheel/kage_genotyper-0.0.9-py3.5.egg-info
2021-12-03T12:20:05,965   running install_scripts
2021-12-03T12:20:06,174   creating build/bdist.linux-armv7l/wheel/kage_genotyper-0.0.9.dist-info/WHEEL
2021-12-03T12:20:06,464   Building wheel for kage-genotyper (setup.py): finished with status 'done'
2021-12-03T12:20:06,469   Created wheel for kage-genotyper: filename=kage_genotyper-0.0.9-py3-none-any.whl size=38398 sha256=6728e2c34e7473f450ba0dc3b680189ec324937e583ce456df04d4352047531b
2021-12-03T12:20:06,470   Stored in directory: /tmp/pip-ephem-wheel-cache-fd1_webe/wheels/05/ea/6a/c8909281f5384cbf52e7334e0cfb1f4b834677a3b7c0a0be31
2021-12-03T12:20:06,487 Successfully built kage-genotyper
2021-12-03T12:20:06,499 Removed build tracker: '/tmp/pip-req-tracker-905i7xjz'