2021-12-05T19:08:10,470 Created temporary directory: /tmp/pip-ephem-wheel-cache-sxv4aekn 2021-12-05T19:08:10,473 Created temporary directory: /tmp/pip-req-tracker-eh4w4_r8 2021-12-05T19:08:10,474 Initialized build tracking at /tmp/pip-req-tracker-eh4w4_r8 2021-12-05T19:08:10,474 Created build tracker: /tmp/pip-req-tracker-eh4w4_r8 2021-12-05T19:08:10,474 Entered build tracker: /tmp/pip-req-tracker-eh4w4_r8 2021-12-05T19:08:10,475 Created temporary directory: /tmp/pip-wheel-fbk5k2to 2021-12-05T19:08:10,510 Looking in indexes: https://pypi.org/simple, https://www.piwheels.org/simple 2021-12-05T19:08:10,513 2 location(s) to search for versions of ngs-tools: 2021-12-05T19:08:10,513 * https://pypi.org/simple/ngs-tools/ 2021-12-05T19:08:10,513 * https://www.piwheels.org/simple/ngs-tools/ 2021-12-05T19:08:10,513 Fetching project page and analyzing links: https://pypi.org/simple/ngs-tools/ 2021-12-05T19:08:10,514 Getting page https://pypi.org/simple/ngs-tools/ 2021-12-05T19:08:10,516 Found index url https://pypi.org/simple 2021-12-05T19:08:10,615 Found link https://files.pythonhosted.org/packages/58/80/e31dc09e54b773fbc2638aeafdda2296ee3673ce1e81dc6f88dfa40eb238/ngs-tools-1.1.2.tar.gz#sha256=1655e20b854e794ff6a8f519ed9e892ef24b747ad94e01ae5aa1e2c1f6de6d5d (from https://pypi.org/simple/ngs-tools/) (requires-python:>=3.6), version: 1.1.2 2021-12-05T19:08:10,616 Found link https://files.pythonhosted.org/packages/1c/e2/3677810459709bec5bd67a2947155b242d40aca25542945e0ebb9f653505/ngs-tools-1.2.0.tar.gz#sha256=6462ce10eb5bf16c779815c467a6425f85736a7d716d876410efd75de01182fe (from https://pypi.org/simple/ngs-tools/) (requires-python:>=3.6), version: 1.2.0 2021-12-05T19:08:10,617 Found link https://files.pythonhosted.org/packages/ed/df/854820831f572781cbfbd27454b2cde9f1cc964f8fb868862e3ddf9108ae/ngs-tools-1.2.1.tar.gz#sha256=793467239a91998f30015de6427b4b750e158a9a2e4b081206169c9e861eb39f (from https://pypi.org/simple/ngs-tools/) (requires-python:>=3.6), version: 1.2.1 2021-12-05T19:08:10,617 Found link https://files.pythonhosted.org/packages/40/61/ecb4bde3459dc2b2f43ce180c352c64a1583af9b4878b9256b8aecc9fc8a/ngs-tools-1.2.2.tar.gz#sha256=e20db65e63b6325da0753078b90559bacb31da316412c1f0b8c6122aa0f4e733 (from https://pypi.org/simple/ngs-tools/) (requires-python:>=3.6), version: 1.2.2 2021-12-05T19:08:10,618 Found link https://files.pythonhosted.org/packages/44/90/69de577e208acc8c11b8072d7de7f82964cb3c23f79719cc4ad1899d6097/ngs-tools-1.2.3.tar.gz#sha256=ddb6022fe8cc2e1e106702f668366fe16b27bc10fee67dfad2808b63baba26ce (from https://pypi.org/simple/ngs-tools/) (requires-python:>=3.6), version: 1.2.3 2021-12-05T19:08:10,618 Found link https://files.pythonhosted.org/packages/cb/a0/bfbf48866af8f753bfacf0c089e4872351ecb6766706df7f94fa9a94a390/ngs-tools-1.3.0.tar.gz#sha256=2afdea16253b5000e7c7fc725819067a069ce9407fda76098fe34d37a2379e74 (from https://pypi.org/simple/ngs-tools/) (requires-python:>=3.6), version: 1.3.0 2021-12-05T19:08:10,619 Found link https://files.pythonhosted.org/packages/7e/d8/c2bf722221cdcd022279bfcc433fa7bc16bb3c2cfb734f16ad20cb5c1870/ngs-tools-1.4.0.tar.gz#sha256=9f6c46a303df58b32b1a73f3d04af7fcf502bf00e569cd457873c777733ddd7e (from https://pypi.org/simple/ngs-tools/) (requires-python:>=3.6), version: 1.4.0 2021-12-05T19:08:10,620 Found link https://files.pythonhosted.org/packages/ea/9a/07cc83ca998f4a83c635fc7f2a206f57adc79c033f5bc17481505f80380c/ngs-tools-1.5.0.tar.gz#sha256=fa3306393abf0e0f335471406d4d77655e0c92fab9ae17d37553704b974474e6 (from https://pypi.org/simple/ngs-tools/) (requires-python:>=3.6), version: 1.5.0 2021-12-05T19:08:10,620 Found link https://files.pythonhosted.org/packages/78/1d/e3480a6bba8a4811319e8e2c5f472fd088527ed4778820f73b5237af98c2/ngs-tools-1.5.1.tar.gz#sha256=aea0cead51f1c5a9a9dedbba253c217d2cf67ff221c44431fcc8115d11d7d207 (from https://pypi.org/simple/ngs-tools/) (requires-python:>=3.6), version: 1.5.1 2021-12-05T19:08:10,621 Found link https://files.pythonhosted.org/packages/67/79/91cfb2bf05a4174358fe2f5e40018ac8d7bd25bdec624c8db7a1754be684/ngs-tools-1.5.2.tar.gz#sha256=d4a384ec37b3c05a30e1213f8cd841f4da024208041ac4aa33c77ef604f39856 (from https://pypi.org/simple/ngs-tools/) (requires-python:>=3.6), version: 1.5.2 2021-12-05T19:08:10,621 Found link https://files.pythonhosted.org/packages/c7/f5/a526d426400c30f56f36a07a08d381b293235f5cd68aced4affbd6078017/ngs-tools-1.5.3.tar.gz#sha256=8d533065ba84ee138ed2f778f6fb328bd24260d5cee191fd801c10e7402349c3 (from https://pypi.org/simple/ngs-tools/) (requires-python:>=3.6), version: 1.5.3 2021-12-05T19:08:10,622 Found link https://files.pythonhosted.org/packages/8d/af/0df283513a2ae52349c671c9a9eb5981da588369a2f668332a94f116f04d/ngs-tools-1.5.4.tar.gz#sha256=573722f9d636232a5a808d0037871c767c1bb3f9e2a2f4746efa906fc66ae5b9 (from https://pypi.org/simple/ngs-tools/) (requires-python:>=3.6), version: 1.5.4 2021-12-05T19:08:10,623 Found link https://files.pythonhosted.org/packages/ea/ed/cc522492a8c5188c62a8b1a58aec0411c3b5e578a15ff23b4b4bac709a3e/ngs-tools-1.5.5.tar.gz#sha256=62ee9bbdef20906681f0f545c3bbcf17e58bddc20568b431c977d601cb3dfa03 (from https://pypi.org/simple/ngs-tools/) (requires-python:>=3.6), version: 1.5.5 2021-12-05T19:08:10,623 Found link https://files.pythonhosted.org/packages/ef/90/b0e6f268c69b82f138a6b07d886ca6c43e74451bbe9411d2e7d6c7ac8a34/ngs-tools-1.5.6.tar.gz#sha256=5cd8e3f55070829269f9f7c4d018f7d12c4a18a171f608aa284f94b6cf9603a9 (from https://pypi.org/simple/ngs-tools/) (requires-python:>=3.6), version: 1.5.6 2021-12-05T19:08:10,624 Found link https://files.pythonhosted.org/packages/79/9a/028c77972c82cf4d95a47d2968741efda5702f04bc1fbcb37c82506f605e/ngs-tools-1.5.7.tar.gz#sha256=1e4183a665f576ce553e6a3452b10270a8b1c806ff7d04ff0b1fe31029815e42 (from https://pypi.org/simple/ngs-tools/) (requires-python:>=3.6), version: 1.5.7 2021-12-05T19:08:10,624 Found link https://files.pythonhosted.org/packages/f4/67/d084e140f641954599422a2fc4bae3dd32ffa38b5c37e7e6d9bf7f296081/ngs-tools-1.5.8.tar.gz#sha256=3ee2eebe1d8809c394f5b7cd89152daaafe779d5472750960932bc35a4f0b9a7 (from https://pypi.org/simple/ngs-tools/) (requires-python:>=3.6), version: 1.5.8 2021-12-05T19:08:10,625 Found link https://files.pythonhosted.org/packages/e6/36/844cb2d4d1f3528c78adef82c20ed354412f0f76fa5bf014c62f143eba51/ngs-tools-1.5.9.tar.gz#sha256=ccf4acbc58c8ec99252808571b8cb3de18def0a8da5018696a003f435f1260ab (from https://pypi.org/simple/ngs-tools/) (requires-python:>=3.6), version: 1.5.9 2021-12-05T19:08:10,625 Fetching project page and analyzing links: https://www.piwheels.org/simple/ngs-tools/ 2021-12-05T19:08:10,626 Getting page https://www.piwheels.org/simple/ngs-tools/ 2021-12-05T19:08:10,627 Found index url https://www.piwheels.org/simple 2021-12-05T19:08:10,810 Skipping link: No binaries permitted for ngs-tools: https://www.piwheels.org/simple/ngs-tools/ngs_tools-1.1.2-py3-none-any.whl#sha256=9b9bd1c9ee9db219e8ec6daf68374a570b1120218a4ef7d7a04ee415d18e05fd (from https://www.piwheels.org/simple/ngs-tools/) (requires-python:>=3.6) 2021-12-05T19:08:10,810 Skipping link: No binaries permitted for ngs-tools: https://www.piwheels.org/simple/ngs-tools/ngs_tools-1.2.0-py3-none-any.whl#sha256=60dbcc1c5132c03998766fda20b622a4dce037ed6d7f0a627358e1bad4f4372c (from https://www.piwheels.org/simple/ngs-tools/) (requires-python:>=3.6) 2021-12-05T19:08:10,810 Skipping link: No binaries permitted for ngs-tools: https://www.piwheels.org/simple/ngs-tools/ngs_tools-1.2.1-py3-none-any.whl#sha256=45796f1aff4813d9efa48859e8b01f0e85358e3f2fc682ffdd190956b3fcf1f2 (from https://www.piwheels.org/simple/ngs-tools/) (requires-python:>=3.6) 2021-12-05T19:08:10,811 Skipping link: No binaries permitted for ngs-tools: https://www.piwheels.org/simple/ngs-tools/ngs_tools-1.2.2-py3-none-any.whl#sha256=682da6e59007cd48bb3f8c93cb752483e21e6862c377732587e3f19646625c0d (from https://www.piwheels.org/simple/ngs-tools/) (requires-python:>=3.6) 2021-12-05T19:08:10,811 Skipping link: No binaries permitted for ngs-tools: https://www.piwheels.org/simple/ngs-tools/ngs_tools-1.2.3-py3-none-any.whl#sha256=e4325ca6c2e61038f550ca9e5c513593ba4cdcafd0bb9e56dc9515e3734bde2d (from https://www.piwheels.org/simple/ngs-tools/) (requires-python:>=3.6) 2021-12-05T19:08:10,811 Skipping link: No binaries permitted for ngs-tools: https://www.piwheels.org/simple/ngs-tools/ngs_tools-1.3.0-py3-none-any.whl#sha256=637c180e653c8cc118967d5fffe8c5e5c72db0681df97b983f940d465d59e7a0 (from https://www.piwheels.org/simple/ngs-tools/) (requires-python:>=3.6) 2021-12-05T19:08:10,812 Skipping link: No binaries permitted for ngs-tools: https://www.piwheels.org/simple/ngs-tools/ngs_tools-1.4.0-py3-none-any.whl#sha256=043cf74c3a420187c172fce50bbcb9a39baa4473efe511c4d4eaee1915041c43 (from https://www.piwheels.org/simple/ngs-tools/) (requires-python:>=3.6) 2021-12-05T19:08:10,812 Skipping link: No binaries permitted for ngs-tools: https://www.piwheels.org/simple/ngs-tools/ngs_tools-1.5.0-py3-none-any.whl#sha256=66eed5f69a66f671c00406c785370cd15f237629e263838c17e1c1e9ebd35bf1 (from https://www.piwheels.org/simple/ngs-tools/) (requires-python:>=3.6) 2021-12-05T19:08:10,812 Skipping link: No binaries permitted for ngs-tools: https://www.piwheels.org/simple/ngs-tools/ngs_tools-1.5.1-py3-none-any.whl#sha256=b454700426dd4dbbc802187a1c9e77e95c5a64a035529cda880c03c7471ad63b (from https://www.piwheels.org/simple/ngs-tools/) (requires-python:>=3.6) 2021-12-05T19:08:10,812 Skipping link: No binaries permitted for ngs-tools: https://www.piwheels.org/simple/ngs-tools/ngs_tools-1.5.2-py3-none-any.whl#sha256=81e789f5fb1a0dff0fca747215fb93accb0486af4bfa6023d1db3e78e5be4b09 (from https://www.piwheels.org/simple/ngs-tools/) (requires-python:>=3.6) 2021-12-05T19:08:10,812 Skipping link: No binaries permitted for ngs-tools: https://www.piwheels.org/simple/ngs-tools/ngs_tools-1.5.3-py3-none-any.whl#sha256=4f4644d9a23b5c3583abbe02a7decfe0d61158008c803a4cb5da80b1045a77f1 (from https://www.piwheels.org/simple/ngs-tools/) (requires-python:>=3.6) 2021-12-05T19:08:10,813 Skipping link: No binaries permitted for ngs-tools: https://www.piwheels.org/simple/ngs-tools/ngs_tools-1.5.4-py3-none-any.whl#sha256=cf71d110eb979267194d531e932d3f6914568ef682f866afd11a07cda37385f9 (from https://www.piwheels.org/simple/ngs-tools/) (requires-python:>=3.6) 2021-12-05T19:08:10,813 Skipping link: No binaries permitted for ngs-tools: https://www.piwheels.org/simple/ngs-tools/ngs_tools-1.5.5-py3-none-any.whl#sha256=aaebdfa779fd91dc9f31cf86afff8405b7d17fb8bd4091cc806846f5c3de61f6 (from https://www.piwheels.org/simple/ngs-tools/) (requires-python:>=3.6) 2021-12-05T19:08:10,813 Skipping link: No binaries permitted for ngs-tools: https://www.piwheels.org/simple/ngs-tools/ngs_tools-1.5.6-py3-none-any.whl#sha256=5db77bcb0c215121d049edb62b42208653509d917ca47d185be87dc33f7eb50b (from https://www.piwheels.org/simple/ngs-tools/) (requires-python:>=3.6) 2021-12-05T19:08:10,813 Skipping link: No binaries permitted for ngs-tools: https://www.piwheels.org/simple/ngs-tools/ngs_tools-1.5.7-py3-none-any.whl#sha256=1d88e9a54d9d196bbaec4d08c5e77bb8a7d7597953310e55314f1bcb05c3f0d1 (from https://www.piwheels.org/simple/ngs-tools/) (requires-python:>=3.6) 2021-12-05T19:08:10,814 Skipping link: No binaries permitted for ngs-tools: https://www.piwheels.org/simple/ngs-tools/ngs_tools-1.5.8-py3-none-any.whl#sha256=3007debd070a8680667c5fe4708c204734d96ffd352b8312e6dd385cf169d782 (from https://www.piwheels.org/simple/ngs-tools/) (requires-python:>=3.6) 2021-12-05T19:08:10,814 Skipping link: not a file: https://www.piwheels.org/simple/ngs-tools/ 2021-12-05T19:08:10,814 Skipping link: not a file: https://pypi.org/simple/ngs-tools/ 2021-12-05T19:08:10,831 Given no hashes to check 1 links for project 'ngs-tools': discarding no candidates 2021-12-05T19:08:10,846 Collecting ngs-tools==1.5.9 2021-12-05T19:08:10,847 Created temporary directory: /tmp/pip-unpack-ph3f097r 2021-12-05T19:08:12,998 Downloading ngs-tools-1.5.9.tar.gz (51.7 MB) 2021-12-05T19:08:20,280 Added ngs-tools==1.5.9 from https://files.pythonhosted.org/packages/e6/36/844cb2d4d1f3528c78adef82c20ed354412f0f76fa5bf014c62f143eba51/ngs-tools-1.5.9.tar.gz#sha256=ccf4acbc58c8ec99252808571b8cb3de18def0a8da5018696a003f435f1260ab to build tracker '/tmp/pip-req-tracker-eh4w4_r8' 2021-12-05T19:08:20,282 Running setup.py (path:/tmp/pip-wheel-fbk5k2to/ngs-tools_a8bc4094ac4c4d2488c4494b785c7376/setup.py) egg_info for package ngs-tools 2021-12-05T19:08:20,283 Created temporary directory: /tmp/pip-pip-egg-info-y4zbtx_h 2021-12-05T19:08:20,283 Running command python setup.py egg_info 2021-12-05T19:08:21,318 running egg_info 2021-12-05T19:08:21,320 creating /tmp/pip-pip-egg-info-y4zbtx_h/ngs_tools.egg-info 2021-12-05T19:08:21,321 writing /tmp/pip-pip-egg-info-y4zbtx_h/ngs_tools.egg-info/PKG-INFO 2021-12-05T19:08:21,324 writing dependency_links to /tmp/pip-pip-egg-info-y4zbtx_h/ngs_tools.egg-info/dependency_links.txt 2021-12-05T19:08:21,326 writing requirements to /tmp/pip-pip-egg-info-y4zbtx_h/ngs_tools.egg-info/requires.txt 2021-12-05T19:08:21,327 writing top-level names to /tmp/pip-pip-egg-info-y4zbtx_h/ngs_tools.egg-info/top_level.txt 2021-12-05T19:08:21,329 writing manifest file '/tmp/pip-pip-egg-info-y4zbtx_h/ngs_tools.egg-info/SOURCES.txt' 2021-12-05T19:08:21,472 reading manifest file '/tmp/pip-pip-egg-info-y4zbtx_h/ngs_tools.egg-info/SOURCES.txt' 2021-12-05T19:08:21,473 reading manifest template 'MANIFEST.in' 2021-12-05T19:08:21,478 adding license file 'LICENSE' 2021-12-05T19:08:21,480 writing manifest file '/tmp/pip-pip-egg-info-y4zbtx_h/ngs_tools.egg-info/SOURCES.txt' 2021-12-05T19:08:21,544 Source in /tmp/pip-wheel-fbk5k2to/ngs-tools_a8bc4094ac4c4d2488c4494b785c7376 has version 1.5.9, which satisfies requirement ngs-tools==1.5.9 from https://files.pythonhosted.org/packages/e6/36/844cb2d4d1f3528c78adef82c20ed354412f0f76fa5bf014c62f143eba51/ngs-tools-1.5.9.tar.gz#sha256=ccf4acbc58c8ec99252808571b8cb3de18def0a8da5018696a003f435f1260ab 2021-12-05T19:08:21,546 Removed ngs-tools==1.5.9 from https://files.pythonhosted.org/packages/e6/36/844cb2d4d1f3528c78adef82c20ed354412f0f76fa5bf014c62f143eba51/ngs-tools-1.5.9.tar.gz#sha256=ccf4acbc58c8ec99252808571b8cb3de18def0a8da5018696a003f435f1260ab from build tracker '/tmp/pip-req-tracker-eh4w4_r8' 2021-12-05T19:08:21,552 Created temporary directory: /tmp/pip-unpack-dg952i43 2021-12-05T19:08:21,552 Building wheels for collected packages: ngs-tools 2021-12-05T19:08:21,557 Created temporary directory: /tmp/pip-wheel-y0fvsr8a 2021-12-05T19:08:21,557 Building wheel for ngs-tools (setup.py): started 2021-12-05T19:08:21,557 Destination directory: /tmp/pip-wheel-y0fvsr8a 2021-12-05T19:08:21,558 Running command /usr/bin/python3 -u -c 'import io, os, sys, setuptools, tokenize; sys.argv[0] = '"'"'/tmp/pip-wheel-fbk5k2to/ngs-tools_a8bc4094ac4c4d2488c4494b785c7376/setup.py'"'"'; __file__='"'"'/tmp/pip-wheel-fbk5k2to/ngs-tools_a8bc4094ac4c4d2488c4494b785c7376/setup.py'"'"';f = getattr(tokenize, '"'"'open'"'"', open)(__file__) if os.path.exists(__file__) else io.StringIO('"'"'from setuptools import setup; setup()'"'"');code = f.read().replace('"'"'\r\n'"'"', '"'"'\n'"'"');f.close();exec(compile(code, __file__, '"'"'exec'"'"'))' bdist_wheel -d /tmp/pip-wheel-y0fvsr8a 2021-12-05T19:08:22,578 running bdist_wheel 2021-12-05T19:08:22,583 running build 2021-12-05T19:08:22,583 running build_py 2021-12-05T19:08:22,708 creating build 2021-12-05T19:08:22,708 creating build/lib 2021-12-05T19:08:22,709 creating build/lib/ngs_tools 2021-12-05T19:08:22,710 copying ngs_tools/__init__.py -> build/lib/ngs_tools 2021-12-05T19:08:22,713 copying ngs_tools/progress.py -> build/lib/ngs_tools 2021-12-05T19:08:22,714 copying ngs_tools/sequence.py -> build/lib/ngs_tools 2021-12-05T19:08:22,718 copying ngs_tools/utils.py -> build/lib/ngs_tools 2021-12-05T19:08:22,720 copying ngs_tools/bam.py -> build/lib/ngs_tools 2021-12-05T19:08:22,723 copying ngs_tools/logging.py -> build/lib/ngs_tools 2021-12-05T19:08:22,726 creating build/lib/ngs_tools/chemistry 2021-12-05T19:08:22,727 copying ngs_tools/chemistry/__init__.py -> build/lib/ngs_tools/chemistry 2021-12-05T19:08:22,729 copying ngs_tools/chemistry/Chemistry.py -> build/lib/ngs_tools/chemistry 2021-12-05T19:08:22,731 copying ngs_tools/chemistry/SingleCellChemistry.py -> build/lib/ngs_tools/chemistry 2021-12-05T19:08:22,734 copying ngs_tools/chemistry/SpatialChemistry.py -> build/lib/ngs_tools/chemistry 2021-12-05T19:08:22,737 creating build/lib/ngs_tools/fasta 2021-12-05T19:08:22,738 copying ngs_tools/fasta/Fasta.py -> build/lib/ngs_tools/fasta 2021-12-05T19:08:22,740 copying ngs_tools/fasta/__init__.py -> build/lib/ngs_tools/fasta 2021-12-05T19:08:22,742 copying ngs_tools/fasta/FastaEntry.py -> build/lib/ngs_tools/fasta 2021-12-05T19:08:22,745 creating build/lib/ngs_tools/fastq 2021-12-05T19:08:22,746 copying ngs_tools/fastq/__init__.py -> build/lib/ngs_tools/fastq 2021-12-05T19:08:22,748 copying ngs_tools/fastq/Fastq.py -> build/lib/ngs_tools/fastq 2021-12-05T19:08:22,750 copying ngs_tools/fastq/Read.py -> build/lib/ngs_tools/fastq 2021-12-05T19:08:22,754 creating build/lib/ngs_tools/gtf 2021-12-05T19:08:22,754 copying ngs_tools/gtf/Segment.py -> build/lib/ngs_tools/gtf 2021-12-05T19:08:22,757 copying ngs_tools/gtf/__init__.py -> build/lib/ngs_tools/gtf 2021-12-05T19:08:22,759 copying ngs_tools/gtf/GtfEntry.py -> build/lib/ngs_tools/gtf 2021-12-05T19:08:22,761 copying ngs_tools/gtf/Gtf.py -> build/lib/ngs_tools/gtf 2021-12-05T19:08:22,763 copying ngs_tools/gtf/SegmentCollection.py -> build/lib/ngs_tools/gtf 2021-12-05T19:08:22,765 running egg_info 2021-12-05T19:08:22,781 writing ngs_tools.egg-info/PKG-INFO 2021-12-05T19:08:22,783 writing dependency_links to ngs_tools.egg-info/dependency_links.txt 2021-12-05T19:08:22,786 writing requirements to ngs_tools.egg-info/requires.txt 2021-12-05T19:08:22,787 writing top-level names to ngs_tools.egg-info/top_level.txt 2021-12-05T19:08:22,795 reading manifest file 'ngs_tools.egg-info/SOURCES.txt' 2021-12-05T19:08:22,799 reading manifest template 'MANIFEST.in' 2021-12-05T19:08:22,804 adding license file 'LICENSE' 2021-12-05T19:08:22,809 writing manifest file 'ngs_tools.egg-info/SOURCES.txt' 2021-12-05T19:08:22,814 creating build/lib/ngs_tools/chemistry/whitelists 2021-12-05T19:08:22,815 copying ngs_tools/chemistry/whitelists/10x_version1_whitelist.txt.gz -> build/lib/ngs_tools/chemistry/whitelists 2021-12-05T19:08:22,861 copying ngs_tools/chemistry/whitelists/10x_version2_whitelist.txt.gz -> build/lib/ngs_tools/chemistry/whitelists 2021-12-05T19:08:22,915 copying ngs_tools/chemistry/whitelists/10x_version3_feature_map.txt.gz -> build/lib/ngs_tools/chemistry/whitelists 2021-12-05T19:08:23,577 copying ngs_tools/chemistry/whitelists/10x_version3_whitelist.txt.gz -> build/lib/ngs_tools/chemistry/whitelists 2021-12-05T19:08:23,909 copying ngs_tools/chemistry/whitelists/indrops_version3_whitelist.txt.gz -> build/lib/ngs_tools/chemistry/whitelists 2021-12-05T19:08:23,923 copying ngs_tools/chemistry/whitelists/sci_fate_whitelist.txt.gz -> build/lib/ngs_tools/chemistry/whitelists 2021-12-05T19:08:23,935 installing to build/bdist.linux-armv7l/wheel 2021-12-05T19:08:23,935 running install 2021-12-05T19:08:23,937 running install_lib 2021-12-05T19:08:23,942 creating build/bdist.linux-armv7l 2021-12-05T19:08:23,943 creating build/bdist.linux-armv7l/wheel 2021-12-05T19:08:23,945 creating build/bdist.linux-armv7l/wheel/ngs_tools 2021-12-05T19:08:23,947 creating build/bdist.linux-armv7l/wheel/ngs_tools/chemistry 2021-12-05T19:08:23,948 copying build/lib/ngs_tools/chemistry/__init__.py -> build/bdist.linux-armv7l/wheel/ngs_tools/chemistry 2021-12-05T19:08:23,951 creating build/bdist.linux-armv7l/wheel/ngs_tools/chemistry/whitelists 2021-12-05T19:08:23,952 copying build/lib/ngs_tools/chemistry/whitelists/10x_version1_whitelist.txt.gz -> build/bdist.linux-armv7l/wheel/ngs_tools/chemistry/whitelists 2021-12-05T19:08:23,988 copying build/lib/ngs_tools/chemistry/whitelists/indrops_version3_whitelist.txt.gz -> build/bdist.linux-armv7l/wheel/ngs_tools/chemistry/whitelists 2021-12-05T19:08:23,997 copying build/lib/ngs_tools/chemistry/whitelists/10x_version3_whitelist.txt.gz -> build/bdist.linux-armv7l/wheel/ngs_tools/chemistry/whitelists 2021-12-05T19:08:24,316 copying build/lib/ngs_tools/chemistry/whitelists/10x_version3_feature_map.txt.gz -> build/bdist.linux-armv7l/wheel/ngs_tools/chemistry/whitelists 2021-12-05T19:08:24,949 copying build/lib/ngs_tools/chemistry/whitelists/10x_version2_whitelist.txt.gz -> build/bdist.linux-armv7l/wheel/ngs_tools/chemistry/whitelists 2021-12-05T19:08:24,994 copying build/lib/ngs_tools/chemistry/whitelists/sci_fate_whitelist.txt.gz -> build/bdist.linux-armv7l/wheel/ngs_tools/chemistry/whitelists 2021-12-05T19:08:24,996 copying build/lib/ngs_tools/chemistry/Chemistry.py -> build/bdist.linux-armv7l/wheel/ngs_tools/chemistry 2021-12-05T19:08:24,999 copying build/lib/ngs_tools/chemistry/SingleCellChemistry.py -> build/bdist.linux-armv7l/wheel/ngs_tools/chemistry 2021-12-05T19:08:25,001 copying build/lib/ngs_tools/chemistry/SpatialChemistry.py -> build/bdist.linux-armv7l/wheel/ngs_tools/chemistry 2021-12-05T19:08:25,003 copying build/lib/ngs_tools/__init__.py -> build/bdist.linux-armv7l/wheel/ngs_tools 2021-12-05T19:08:25,006 creating build/bdist.linux-armv7l/wheel/ngs_tools/fasta 2021-12-05T19:08:25,007 copying build/lib/ngs_tools/fasta/Fasta.py -> build/bdist.linux-armv7l/wheel/ngs_tools/fasta 2021-12-05T19:08:25,010 copying build/lib/ngs_tools/fasta/__init__.py -> build/bdist.linux-armv7l/wheel/ngs_tools/fasta 2021-12-05T19:08:25,013 copying build/lib/ngs_tools/fasta/FastaEntry.py -> build/bdist.linux-armv7l/wheel/ngs_tools/fasta 2021-12-05T19:08:25,016 creating build/bdist.linux-armv7l/wheel/ngs_tools/fastq 2021-12-05T19:08:25,017 copying build/lib/ngs_tools/fastq/__init__.py -> build/bdist.linux-armv7l/wheel/ngs_tools/fastq 2021-12-05T19:08:25,020 copying build/lib/ngs_tools/fastq/Fastq.py -> build/bdist.linux-armv7l/wheel/ngs_tools/fastq 2021-12-05T19:08:25,022 copying build/lib/ngs_tools/fastq/Read.py -> build/bdist.linux-armv7l/wheel/ngs_tools/fastq 2021-12-05T19:08:25,024 copying build/lib/ngs_tools/progress.py -> build/bdist.linux-armv7l/wheel/ngs_tools 2021-12-05T19:08:25,027 copying build/lib/ngs_tools/sequence.py -> build/bdist.linux-armv7l/wheel/ngs_tools 2021-12-05T19:08:25,030 copying build/lib/ngs_tools/utils.py -> build/bdist.linux-armv7l/wheel/ngs_tools 2021-12-05T19:08:25,034 copying build/lib/ngs_tools/bam.py -> build/bdist.linux-armv7l/wheel/ngs_tools 2021-12-05T19:08:25,037 copying build/lib/ngs_tools/logging.py -> build/bdist.linux-armv7l/wheel/ngs_tools 2021-12-05T19:08:25,041 creating build/bdist.linux-armv7l/wheel/ngs_tools/gtf 2021-12-05T19:08:25,042 copying build/lib/ngs_tools/gtf/Segment.py -> build/bdist.linux-armv7l/wheel/ngs_tools/gtf 2021-12-05T19:08:25,044 copying build/lib/ngs_tools/gtf/__init__.py -> build/bdist.linux-armv7l/wheel/ngs_tools/gtf 2021-12-05T19:08:25,048 copying build/lib/ngs_tools/gtf/GtfEntry.py -> build/bdist.linux-armv7l/wheel/ngs_tools/gtf 2021-12-05T19:08:25,050 copying build/lib/ngs_tools/gtf/Gtf.py -> build/bdist.linux-armv7l/wheel/ngs_tools/gtf 2021-12-05T19:08:25,053 copying build/lib/ngs_tools/gtf/SegmentCollection.py -> build/bdist.linux-armv7l/wheel/ngs_tools/gtf 2021-12-05T19:08:25,055 running install_egg_info 2021-12-05T19:08:25,066 Copying ngs_tools.egg-info to build/bdist.linux-armv7l/wheel/ngs_tools-1.5.9-py3.7.egg-info 2021-12-05T19:08:25,080 running install_scripts 2021-12-05T19:08:25,163 adding license file "LICENSE" (matched pattern "LICEN[CS]E*") 2021-12-05T19:08:25,167 creating build/bdist.linux-armv7l/wheel/ngs_tools-1.5.9.dist-info/WHEEL 2021-12-05T19:08:25,169 creating '/tmp/pip-wheel-y0fvsr8a/ngs_tools-1.5.9-py3-none-any.whl' and adding 'build/bdist.linux-armv7l/wheel' to it 2021-12-05T19:08:25,172 adding 'ngs_tools/__init__.py' 2021-12-05T19:08:25,174 adding 'ngs_tools/bam.py' 2021-12-05T19:08:25,176 adding 'ngs_tools/logging.py' 2021-12-05T19:08:25,178 adding 'ngs_tools/progress.py' 2021-12-05T19:08:25,182 adding 'ngs_tools/sequence.py' 2021-12-05T19:08:25,186 adding 'ngs_tools/utils.py' 2021-12-05T19:08:25,190 adding 'ngs_tools/chemistry/Chemistry.py' 2021-12-05T19:08:25,193 adding 'ngs_tools/chemistry/SingleCellChemistry.py' 2021-12-05T19:08:25,194 adding 'ngs_tools/chemistry/SpatialChemistry.py' 2021-12-05T19:08:25,195 adding 'ngs_tools/chemistry/__init__.py' 2021-12-05T19:08:25,449 adding 'ngs_tools/chemistry/whitelists/10x_version1_whitelist.txt.gz' 2021-12-05T19:08:25,730 adding 'ngs_tools/chemistry/whitelists/10x_version2_whitelist.txt.gz' 2021-12-05T19:08:30,124 adding 'ngs_tools/chemistry/whitelists/10x_version3_feature_map.txt.gz' 2021-12-05T19:08:32,601 adding 'ngs_tools/chemistry/whitelists/10x_version3_whitelist.txt.gz' 2021-12-05T19:08:32,813 adding 'ngs_tools/chemistry/whitelists/indrops_version3_whitelist.txt.gz' 2021-12-05T19:08:32,819 adding 'ngs_tools/chemistry/whitelists/sci_fate_whitelist.txt.gz' 2021-12-05T19:08:32,821 adding 'ngs_tools/fasta/Fasta.py' 2021-12-05T19:08:32,822 adding 'ngs_tools/fasta/FastaEntry.py' 2021-12-05T19:08:32,823 adding 'ngs_tools/fasta/__init__.py' 2021-12-05T19:08:32,825 adding 'ngs_tools/fastq/Fastq.py' 2021-12-05T19:08:32,826 adding 'ngs_tools/fastq/Read.py' 2021-12-05T19:08:32,828 adding 'ngs_tools/fastq/__init__.py' 2021-12-05T19:08:32,830 adding 'ngs_tools/gtf/Gtf.py' 2021-12-05T19:08:32,831 adding 'ngs_tools/gtf/GtfEntry.py' 2021-12-05T19:08:32,832 adding 'ngs_tools/gtf/Segment.py' 2021-12-05T19:08:32,834 adding 'ngs_tools/gtf/SegmentCollection.py' 2021-12-05T19:08:32,836 adding 'ngs_tools/gtf/__init__.py' 2021-12-05T19:08:32,838 adding 'ngs_tools-1.5.9.dist-info/LICENSE' 2021-12-05T19:08:32,839 adding 'ngs_tools-1.5.9.dist-info/METADATA' 2021-12-05T19:08:32,840 adding 'ngs_tools-1.5.9.dist-info/WHEEL' 2021-12-05T19:08:32,841 adding 'ngs_tools-1.5.9.dist-info/top_level.txt' 2021-12-05T19:08:32,841 adding 'ngs_tools-1.5.9.dist-info/RECORD' 2021-12-05T19:08:33,503 removing build/bdist.linux-armv7l/wheel 2021-12-05T19:08:33,614 Building wheel for ngs-tools (setup.py): finished with status 'done' 2021-12-05T19:08:34,246 Created wheel for ngs-tools: filename=ngs_tools-1.5.9-py3-none-any.whl size=51708637 sha256=c5ca13ac0dc3d7aa4b07eda51f02001a66620f5d465fc73096e86407bf94cb77 2021-12-05T19:08:34,246 Stored in directory: /tmp/pip-ephem-wheel-cache-sxv4aekn/wheels/4b/2d/fc/aacc1c08aec6842adff734d6e49905e18cbe7ec9318dba36dd 2021-12-05T19:08:34,280 Successfully built ngs-tools 2021-12-05T19:08:35,880 Removed build tracker: '/tmp/pip-req-tracker-eh4w4_r8'