2021-12-06T12:34:16,498 Created temporary directory: /tmp/pip-ephem-wheel-cache-g72pr9u5
2021-12-06T12:34:16,504 Created temporary directory: /tmp/pip-req-tracker-8iskm1co
2021-12-06T12:34:16,504 Initialized build tracking at /tmp/pip-req-tracker-8iskm1co
2021-12-06T12:34:16,505 Created build tracker: /tmp/pip-req-tracker-8iskm1co
2021-12-06T12:34:16,505 Entered build tracker: /tmp/pip-req-tracker-8iskm1co
2021-12-06T12:34:16,506 Created temporary directory: /tmp/pip-wheel-sf9dhiku
2021-12-06T12:34:16,561 Looking in indexes: https://pypi.org/simple, https://www.piwheels.org/simple
2021-12-06T12:34:16,567 2 location(s) to search for versions of igv-jupyter:
2021-12-06T12:34:16,567 * https://pypi.org/simple/igv-jupyter/
2021-12-06T12:34:16,567 * https://www.piwheels.org/simple/igv-jupyter/
2021-12-06T12:34:16,568 Fetching project page and analyzing links: https://pypi.org/simple/igv-jupyter/
2021-12-06T12:34:16,569 Getting page https://pypi.org/simple/igv-jupyter/
2021-12-06T12:34:16,572 Found index url https://pypi.org/simple
2021-12-06T12:34:16,856   Found link https://files.pythonhosted.org/packages/c6/a4/11e043b8c8b09c72009785995d1911e8a04c9879cdbce242b01f1af439c6/igv-jupyter-0.9.7.tar.gz#sha256=0c22318b9686c0e975ed7d1bf806456983ba10f560a6f764fa27c4efd1d924ec (from https://pypi.org/simple/igv-jupyter/), version: 0.9.7
2021-12-06T12:34:16,857   Skipping link: No binaries permitted for igv-jupyter: https://files.pythonhosted.org/packages/fc/26/cbbfa5adec59abf52392f417b238994a7f3978c2442f7b405a5b720c6beb/igv_jupyter-0.9.7-py3-none-any.whl#sha256=6d6a70ffee2c2d7ec7c317619349f211b02cbfe989c3539781c857f4361e71bb (from https://pypi.org/simple/igv-jupyter/)
2021-12-06T12:34:16,858   Skipping link: unsupported archive format: .egg: https://files.pythonhosted.org/packages/fb/c0/8dacc3acf38db5c8644acea47697b5b27e7fd75c375528d143d783df4993/igv_jupyter-0.9.7-py3.7.egg#sha256=0f9cecd6a8c1d1f840842ec0425906922119bb48f56ed32374b1304a5eec2c85 (from https://pypi.org/simple/igv-jupyter/)
2021-12-06T12:34:16,858   Found link https://files.pythonhosted.org/packages/91/58/3dd69e9059e82e37ced3e24ca8d5aeaa47da36e4b5beb7dc31c374a88567/igv-jupyter-0.9.8.tar.gz#sha256=75ce6cc461c08af01fbee357cdb0501a4133896f6d94980f654d5b44294e3030 (from https://pypi.org/simple/igv-jupyter/), version: 0.9.8
2021-12-06T12:34:16,859   Skipping link: No binaries permitted for igv-jupyter: https://files.pythonhosted.org/packages/fa/79/b698ff2bcfb5f456be04a46f65a3732c484adf8e66a606f00448c0e308a3/igv_jupyter-0.9.8-py3-none-any.whl#sha256=49b8f3567353861c9697dd51ed4e82ce520507c376e5b71074ade0272cd096d7 (from https://pypi.org/simple/igv-jupyter/)
2021-12-06T12:34:16,860   Found link https://files.pythonhosted.org/packages/d3/83/7974d7fd9924a2c2d60828f8682361ec68c85009f9f9496a3d11952229fc/igv-jupyter-0.10.0b0.tar.gz#sha256=ce32feb362b7ff019044323275367ce2b4154ee1e99a1398eaa6920c31366217 (from https://pypi.org/simple/igv-jupyter/) (requires-python:>=3.6), version: 0.10.0b0
2021-12-06T12:34:16,861   Skipping link: No binaries permitted for igv-jupyter: https://files.pythonhosted.org/packages/31/f2/00164962df4a17d4e7ba4643cd2913285556b76dfdecd839c33943eff2e5/igv_jupyter-0.10.0b0-py3-none-any.whl#sha256=e8e3b6d652f72d2fb0a0335194d042da78887fa4374873e28338e5ac970e96bc (from https://pypi.org/simple/igv-jupyter/) (requires-python:>=3.6)
2021-12-06T12:34:16,862   Found link https://files.pythonhosted.org/packages/be/55/50bc9c86de202d92327e955ec3964c30eb966f60575584cd855a1275a815/igv-jupyter-0.10.0.tar.gz#sha256=c6b026da4a7fbb406b33a4df88b03c1148846a52667d92048942bd8f533e8f55 (from https://pypi.org/simple/igv-jupyter/) (requires-python:>=3.6), version: 0.10.0
2021-12-06T12:34:16,863   Skipping link: No binaries permitted for igv-jupyter: https://files.pythonhosted.org/packages/0b/a4/669df50773e33e19a5a2f68e8dbaaf20ed186f5537e4c2c78039cf3e8ff9/igv_jupyter-0.10.0-py3-none-any.whl#sha256=30ff508bc60c2ef973e22266aa8e225c0ff7b9daee1c0f6de028cb4946e968bd (from https://pypi.org/simple/igv-jupyter/) (requires-python:>=3.6)
2021-12-06T12:34:16,864   Found link https://files.pythonhosted.org/packages/98/ac/d8a3e36f81691db629f222fcceaa27f5802a5ed6b15a7508e84aef8a4459/igv-jupyter-0.10.1.tar.gz#sha256=cd0961c376dcc7159775b1e85f717fa607a255b603c92643d3d8df552190e8f0 (from https://pypi.org/simple/igv-jupyter/) (requires-python:>=3.6), version: 0.10.1
2021-12-06T12:34:16,865   Skipping link: No binaries permitted for igv-jupyter: https://files.pythonhosted.org/packages/88/06/686839f6b3017779cebdbf47891dc7683993fa0b8336740027e6ef19bd9c/igv_jupyter-0.10.1-py3-none-any.whl#sha256=93417db5d43b7ed815f4868fe3d03a19b338e7341ed9513fd83d0d1cdfc9164e (from https://pypi.org/simple/igv-jupyter/) (requires-python:>=3.6)
2021-12-06T12:34:16,866   Found link https://files.pythonhosted.org/packages/f0/ed/f43038b632d4673e5562ed410abcf331509603ad407629c1dde1fe602c69/igv-jupyter-0.10.2.tar.gz#sha256=5dc2f6e676fd7bcceaab2d42fffe0a451a5be70f46309cab011a7c59be498544 (from https://pypi.org/simple/igv-jupyter/) (requires-python:>=3.6), version: 0.10.2
2021-12-06T12:34:16,866   Skipping link: No binaries permitted for igv-jupyter: https://files.pythonhosted.org/packages/18/1e/c2910237c01fb78ce1fb72539f6140a7ecfa580b5e9f3c2c39b55fd41c09/igv_jupyter-0.10.2-py3-none-any.whl#sha256=07f637baaccb3efeecaa40e227117ff8134ca3a374d06fc23404c97d89cc28df (from https://pypi.org/simple/igv-jupyter/) (requires-python:>=3.6)
2021-12-06T12:34:16,867   Found link https://files.pythonhosted.org/packages/ae/2b/b1ac690c8e16283decfdc6f2c8e433c0a9d7cfcfd1054fb4117245cad4f0/igv-jupyter-0.10.3.tar.gz#sha256=3a977cf3e182ebf5bb6eda2b892c324af47dc400548d4eb8296ecefca7c8740f (from https://pypi.org/simple/igv-jupyter/) (requires-python:>=3.6), version: 0.10.3
2021-12-06T12:34:16,868   Skipping link: No binaries permitted for igv-jupyter: https://files.pythonhosted.org/packages/3b/37/238c54c314068aea1b26b40b5edf3abe8ed093b901df74e4abf32e994660/igv_jupyter-0.10.3-py3-none-any.whl#sha256=f8352283bb695a70893090aadac6fcff23c677257c8f1ec754e308538357146f (from https://pypi.org/simple/igv-jupyter/) (requires-python:>=3.6)
2021-12-06T12:34:16,869   Found link https://files.pythonhosted.org/packages/ff/56/7223b22dbea919dd74457566f75e6ba25cc083fe506362af09a8703c7ba4/igv-jupyter-0.10.4.tar.gz#sha256=60c74fac451e1e28935b91c363ca411c265bc0ec17e331fa3a853c31e5fa19b1 (from https://pypi.org/simple/igv-jupyter/) (requires-python:>=3.6), version: 0.10.4
2021-12-06T12:34:16,870   Skipping link: No binaries permitted for igv-jupyter: https://files.pythonhosted.org/packages/36/8d/e741b6eff2aeea169509a257c3b392e638a1e5737bbf4a7ba6d4160af7ae/igv_jupyter-0.10.4-py3-none-any.whl#sha256=f257a5b6868ee1d850d776c77057bde7945b556f9b8be0844c7f5c7199f15375 (from https://pypi.org/simple/igv-jupyter/) (requires-python:>=3.6)
2021-12-06T12:34:16,870 Fetching project page and analyzing links: https://www.piwheels.org/simple/igv-jupyter/
2021-12-06T12:34:16,871 Getting page https://www.piwheels.org/simple/igv-jupyter/
2021-12-06T12:34:16,873 Found index url https://www.piwheels.org/simple
2021-12-06T12:34:17,075   Skipping link: No binaries permitted for igv-jupyter: https://www.piwheels.org/simple/igv-jupyter/igv_jupyter-0.10.0-py3-none-any.whl#sha256=30ff508bc60c2ef973e22266aa8e225c0ff7b9daee1c0f6de028cb4946e968bd (from https://www.piwheels.org/simple/igv-jupyter/) (requires-python:>=3.6)
2021-12-06T12:34:17,075   Skipping link: No binaries permitted for igv-jupyter: https://www.piwheels.org/simple/igv-jupyter/igv_jupyter-0.10.0b0-py3-none-any.whl#sha256=e8e3b6d652f72d2fb0a0335194d042da78887fa4374873e28338e5ac970e96bc (from https://www.piwheels.org/simple/igv-jupyter/) (requires-python:>=3.6)
2021-12-06T12:34:17,076   Skipping link: No binaries permitted for igv-jupyter: https://www.piwheels.org/simple/igv-jupyter/igv_jupyter-0.10.1-py3-none-any.whl#sha256=93417db5d43b7ed815f4868fe3d03a19b338e7341ed9513fd83d0d1cdfc9164e (from https://www.piwheels.org/simple/igv-jupyter/) (requires-python:>=3.6)
2021-12-06T12:34:17,076   Skipping link: No binaries permitted for igv-jupyter: https://www.piwheels.org/simple/igv-jupyter/igv_jupyter-0.9.7-py3-none-any.whl#sha256=6d6a70ffee2c2d7ec7c317619349f211b02cbfe989c3539781c857f4361e71bb (from https://www.piwheels.org/simple/igv-jupyter/)
2021-12-06T12:34:17,077   Skipping link: No binaries permitted for igv-jupyter: https://www.piwheels.org/simple/igv-jupyter/igv_jupyter-0.9.8-py3-none-any.whl#sha256=49b8f3567353861c9697dd51ed4e82ce520507c376e5b71074ade0272cd096d7 (from https://www.piwheels.org/simple/igv-jupyter/)
2021-12-06T12:34:17,077 Skipping link: not a file: https://www.piwheels.org/simple/igv-jupyter/
2021-12-06T12:34:17,078 Skipping link: not a file: https://pypi.org/simple/igv-jupyter/
2021-12-06T12:34:17,120 Given no hashes to check 1 links for project 'igv-jupyter': discarding no candidates
2021-12-06T12:34:17,162 Collecting igv-jupyter==0.10.4
2021-12-06T12:34:17,165   Created temporary directory: /tmp/pip-unpack-nrqwv2g1
2021-12-06T12:34:17,253   Downloading igv-jupyter-0.10.4.tar.gz (3.3 MB)
2021-12-06T12:34:19,517   Added igv-jupyter==0.10.4 from https://files.pythonhosted.org/packages/ff/56/7223b22dbea919dd74457566f75e6ba25cc083fe506362af09a8703c7ba4/igv-jupyter-0.10.4.tar.gz#sha256=60c74fac451e1e28935b91c363ca411c265bc0ec17e331fa3a853c31e5fa19b1 to build tracker '/tmp/pip-req-tracker-8iskm1co'
2021-12-06T12:34:19,533   Created temporary directory: /tmp/pip-build-env-o1h2dcug
2021-12-06T12:34:19,554   Created temporary directory: /tmp/pip-standalone-pip-hayyzxlb
2021-12-06T12:34:21,280   Installing build dependencies: started
2021-12-06T12:34:21,281   Running command /usr/bin/python3 /tmp/pip-standalone-pip-hayyzxlb/__env_pip__.zip/pip install --ignore-installed --no-user --prefix /tmp/pip-build-env-o1h2dcug/overlay --no-warn-script-location -v --no-binary igv-jupyter --only-binary :none: -i https://pypi.org/simple --extra-index-url https://www.piwheels.org/simple --prefer-binary -- 'ipywidgets>=7.0.0' 'jupyter_packaging~=0.7.9' 'jupyterlab~=3.0' 'setuptools>=40.8.0' wheel
2021-12-06T12:34:29,826   Using pip 21.3.1 from /tmp/pip-standalone-pip-hayyzxlb/__env_pip__.zip/pip (python 3.9)
2021-12-06T12:34:30,634   Looking in indexes: https://pypi.org/simple, https://www.piwheels.org/simple
2021-12-06T12:34:31,879   Collecting ipywidgets>=7.0.0
2021-12-06T12:34:31,896     Downloading https://www.piwheels.org/simple/ipywidgets/ipywidgets-7.6.5-py2.py3-none-any.whl (123 kB)
2021-12-06T12:34:32,351   Collecting jupyter_packaging~=0.7.9
2021-12-06T12:34:32,370     Downloading https://www.piwheels.org/simple/jupyter-packaging/jupyter_packaging-0.7.12-py2.py3-none-any.whl (10 kB)
2021-12-06T12:34:35,399   Collecting jupyterlab~=3.0
2021-12-06T12:34:35,416     Downloading https://www.piwheels.org/simple/jupyterlab/jupyterlab-3.2.4-py3-none-any.whl (8.6 MB)
2021-12-06T12:34:41,324   Collecting setuptools>=40.8.0
2021-12-06T12:34:41,567     Using cached https://www.piwheels.org/simple/setuptools/setuptools-59.5.0-py3-none-any.whl (952 kB)
2021-12-06T12:34:42,245   Collecting wheel
2021-12-06T12:34:42,276     Using cached https://www.piwheels.org/simple/wheel/wheel-0.37.0-py2.py3-none-any.whl (35 kB)
2021-12-06T12:34:42,500   Collecting ipython-genutils~=0.2.0
2021-12-06T12:34:42,517     Downloading https://www.piwheels.org/simple/ipython-genutils/ipython_genutils-0.2.0-py2.py3-none-any.whl (26 kB)
2021-12-06T12:34:43,274   Collecting ipykernel>=4.5.1
2021-12-06T12:34:43,292     Downloading https://www.piwheels.org/simple/ipykernel/ipykernel-6.6.0-py3-none-any.whl (126 kB)
2021-12-06T12:34:43,689   Collecting nbformat>=4.2.0
2021-12-06T12:34:43,706     Downloading https://www.piwheels.org/simple/nbformat/nbformat-5.1.3-py3-none-any.whl (178 kB)
2021-12-06T12:34:44,839   Collecting ipython>=4.0.0
2021-12-06T12:34:44,857     Downloading https://www.piwheels.org/simple/ipython/ipython-7.30.1-py3-none-any.whl (791 kB)
2021-12-06T12:34:45,437   Collecting jupyterlab-widgets>=1.0.0
2021-12-06T12:34:45,525     Downloading jupyterlab_widgets-1.0.2-py3-none-any.whl (243 kB)
2021-12-06T12:34:45,882   Collecting traitlets>=4.3.1
2021-12-06T12:34:45,900     Downloading https://www.piwheels.org/simple/traitlets/traitlets-5.1.1-py3-none-any.whl (102 kB)
2021-12-06T12:34:46,633   Collecting widgetsnbextension~=3.5.0
2021-12-06T12:34:46,651     Downloading https://www.piwheels.org/simple/widgetsnbextension/widgetsnbextension-3.5.2-py2.py3-none-any.whl (1.6 MB)
2021-12-06T12:34:47,506   Collecting packaging
2021-12-06T12:34:47,538     Using cached https://www.piwheels.org/simple/packaging/packaging-21.3-py3-none-any.whl (40 kB)
2021-12-06T12:34:48,006   Collecting nbclassic~=0.2
2021-12-06T12:34:48,022     Downloading https://www.piwheels.org/simple/nbclassic/nbclassic-0.3.4-py3-none-any.whl (25 kB)
2021-12-06T12:34:48,418   Collecting jupyter-core
2021-12-06T12:34:48,435     Downloading https://www.piwheels.org/simple/jupyter-core/jupyter_core-4.9.1-py3-none-any.whl (86 kB)
2021-12-06T12:34:48,881   Collecting jinja2>=2.1
2021-12-06T12:34:48,923     Using cached https://www.piwheels.org/simple/jinja2/Jinja2-3.0.3-py3-none-any.whl (133 kB)
2021-12-06T12:34:49,621   Collecting jupyter-server~=1.4
2021-12-06T12:34:49,640     Downloading https://www.piwheels.org/simple/jupyter-server/jupyter_server-1.12.1-py3-none-any.whl (395 kB)
2021-12-06T12:34:50,482   Collecting jupyterlab-server~=2.3
2021-12-06T12:34:50,498     Downloading https://www.piwheels.org/simple/jupyterlab-server/jupyterlab_server-2.8.2-py3-none-any.whl (58 kB)
2021-12-06T12:34:51,768   Collecting tornado>=6.1.0
2021-12-06T12:34:51,894     Using cached https://www.piwheels.org/simple/tornado/tornado-6.1-cp39-cp39-linux_armv7l.whl (421 kB)
2021-12-06T12:34:52,612   Collecting jupyter-client<8.0
2021-12-06T12:34:52,630     Downloading https://www.piwheels.org/simple/jupyter-client/jupyter_client-7.1.0-py3-none-any.whl (129 kB)
2021-12-06T12:34:55,005   Collecting debugpy<2.0,>=1.0.0
2021-12-06T12:34:55,026     Downloading https://www.piwheels.org/simple/debugpy/debugpy-1.5.1-cp39-cp39-linux_armv7l.whl (3.0 MB)
2021-12-06T12:34:55,979   Collecting matplotlib-inline<0.2.0,>=0.1.0
2021-12-06T12:34:55,996     Downloading https://www.piwheels.org/simple/matplotlib-inline/matplotlib_inline-0.1.3-py3-none-any.whl (9.1 kB)
2021-12-06T12:34:57,506   Collecting pexpect>4.3
2021-12-06T12:34:57,540     Using cached https://www.piwheels.org/simple/pexpect/pexpect-4.8.0-py2.py3-none-any.whl (59 kB)
2021-12-06T12:34:58,094   Collecting pygments
2021-12-06T12:34:58,339     Using cached https://www.piwheels.org/simple/pygments/Pygments-2.10.0-py3-none-any.whl (1.0 MB)
2021-12-06T12:34:58,823   Collecting jedi>=0.16
2021-12-06T12:34:58,844     Downloading https://www.piwheels.org/simple/jedi/jedi-0.18.1-py2.py3-none-any.whl (1.6 MB)
2021-12-06T12:34:59,491   Collecting backcall
2021-12-06T12:34:59,507     Downloading https://www.piwheels.org/simple/backcall/backcall-0.2.0-py2.py3-none-any.whl (11 kB)
2021-12-06T12:34:59,688   Collecting pickleshare
2021-12-06T12:34:59,704     Downloading https://www.piwheels.org/simple/pickleshare/pickleshare-0.7.5-py2.py3-none-any.whl (6.9 kB)
2021-12-06T12:35:00,058   Collecting decorator
2021-12-06T12:35:00,078     Downloading https://www.piwheels.org/simple/decorator/decorator-5.1.0-py3-none-any.whl (10 kB)
2021-12-06T12:35:01,014   Collecting prompt-toolkit!=3.0.0,!=3.0.1,<3.1.0,>=2.0.0
2021-12-06T12:35:01,031     Downloading https://www.piwheels.org/simple/prompt-toolkit/prompt_toolkit-3.0.23-py3-none-any.whl (374 kB)
2021-12-06T12:35:02,064   Collecting MarkupSafe>=2.0
2021-12-06T12:35:02,094     Using cached https://www.piwheels.org/simple/markupsafe/MarkupSafe-2.0.1-cp39-cp39-linux_armv7l.whl (25 kB)
2021-12-06T12:35:02,418   Collecting Send2Trash
2021-12-06T12:35:02,436     Downloading https://www.piwheels.org/simple/send2trash/Send2Trash-1.8.0-py3-none-any.whl (20 kB)
2021-12-06T12:35:02,981   Collecting anyio<4,>=3.1.0
2021-12-06T12:35:03,036     Using cached https://www.piwheels.org/simple/anyio/anyio-3.4.0-py3-none-any.whl (78 kB)
2021-12-06T12:35:05,954   Collecting pyzmq>=17
2021-12-06T12:35:05,972     Downloading https://www.piwheels.org/simple/pyzmq/pyzmq-22.3.0-cp39-cp39-linux_armv7l.whl (6.8 MB)
2021-12-06T12:35:07,982   Collecting websocket-client
2021-12-06T12:35:07,998     Downloading https://www.piwheels.org/simple/websocket-client/websocket_client-1.2.1-py2.py3-none-any.whl (52 kB)
2021-12-06T12:35:08,317   Collecting terminado>=0.8.3
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2021-12-06T12:35:09,097   Collecting argon2-cffi
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2021-12-06T12:35:21,810   Collecting attrs>=17.4.0
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2021-12-06T12:35:22,384   Collecting python-dateutil>=2.1
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2021-12-06T12:35:23,214   Collecting nest-asyncio>=1.5
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2021-12-06T12:35:23,962   Collecting ptyprocess>=0.5
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2021-12-06T12:35:29,177   Collecting pytz>=2015.7
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2021-12-06T12:35:30,543   Collecting nbclient<0.6.0,>=0.5.0
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2021-12-06T12:35:30,752   Collecting testpath
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2021-12-06T12:35:31,599   Collecting pandocfilters>=1.4.1
2021-12-06T12:35:31,616     Downloading https://www.piwheels.org/simple/pandocfilters/pandocfilters-1.5.0-py2.py3-none-any.whl (11 kB)
2021-12-06T12:35:31,837   Collecting defusedxml
2021-12-06T12:35:31,854     Downloading https://www.piwheels.org/simple/defusedxml/defusedxml-0.7.1-py2.py3-none-any.whl (25 kB)
2021-12-06T12:35:32,182   Collecting jupyterlab-pygments
2021-12-06T12:35:32,199     Downloading https://www.piwheels.org/simple/jupyterlab-pygments/jupyterlab_pygments-0.1.2-py2.py3-none-any.whl (4.6 kB)
2021-12-06T12:35:33,043   Collecting charset-normalizer~=2.0.0
2021-12-06T12:35:33,090     Using cached https://www.piwheels.org/simple/charset-normalizer/charset_normalizer-2.0.9-py3-none-any.whl (43 kB)
2021-12-06T12:35:33,781   Collecting urllib3<1.27,>=1.21.1
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2021-12-06T12:35:34,256   Collecting certifi>=2017.4.17
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2021-12-06T12:35:34,992   Collecting pycparser
2021-12-06T12:35:35,031     Using cached https://www.piwheels.org/simple/pycparser/pycparser-2.21-py2.py3-none-any.whl (119 kB)
2021-12-06T12:35:36,473   Collecting six>=1.5
2021-12-06T12:35:36,502     Using cached https://www.piwheels.org/simple/six/six-1.16.0-py2.py3-none-any.whl (11 kB)
2021-12-06T12:35:37,045   Collecting webencodings
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2021-12-06T12:35:43,963   Installing collected packages: traitlets, six, pyrsistent, attrs, wcwidth, tornado, pyzmq, python-dateutil, pyparsing, ptyprocess, parso, nest-asyncio, jupyter-core, jsonschema, ipython-genutils, entrypoints, webencodings, setuptools, pygments, pycparser, prompt-toolkit, pickleshare, pexpect, packaging, nbformat, matplotlib-inline, MarkupSafe, jupyter-client, jedi, decorator, backcall, testpath, sniffio, pandocfilters, nbclient, mistune, jupyterlab-pygments, jinja2, ipython, idna, defusedxml, debugpy, cffi, bleach, websocket-client, urllib3, terminado, Send2Trash, pytz, prometheus-client, nbconvert, ipykernel, charset-normalizer, certifi, argon2-cffi, anyio, requests, notebook, jupyter-server, json5, babel, widgetsnbextension, nbclassic, jupyterlab-widgets, jupyterlab-server, wheel, jupyterlab, jupyter-packaging, ipywidgets
2021-12-06T12:35:52,978     Creating /tmp/pip-build-env-o1h2dcug/overlay/bin
2021-12-06T12:35:52,980     changing mode of /tmp/pip-build-env-o1h2dcug/overlay/bin/jupyter to 755
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2021-12-06T12:35:53,567     changing mode of /tmp/pip-build-env-o1h2dcug/overlay/bin/jsonschema to 755
2021-12-06T12:36:02,912     changing mode of /tmp/pip-build-env-o1h2dcug/overlay/bin/pygmentize to 755
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2021-12-06T12:36:08,929     changing mode of /tmp/pip-build-env-o1h2dcug/overlay/bin/jupyter-run to 755
2021-12-06T12:36:16,954     changing mode of /tmp/pip-build-env-o1h2dcug/overlay/bin/jupyter-execute to 755
2021-12-06T12:36:22,422     changing mode of /tmp/pip-build-env-o1h2dcug/overlay/bin/iptest to 755
2021-12-06T12:36:22,425     changing mode of /tmp/pip-build-env-o1h2dcug/overlay/bin/iptest3 to 755
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2021-12-06T12:36:22,430     changing mode of /tmp/pip-build-env-o1h2dcug/overlay/bin/ipython3 to 755
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2021-12-06T12:36:36,930     changing mode of /tmp/pip-build-env-o1h2dcug/overlay/bin/jupyter-dejavu to 755
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2021-12-06T12:37:03,195   ERROR: pip's dependency resolver does not currently take into account all the packages that are installed. This behaviour is the source of the following dependency conflicts.
2021-12-06T12:37:03,196   conan 1.43.0 requires Jinja2<3,>=2.9, but you have jinja2 3.0.3 which is incompatible.
2021-12-06T12:37:03,197   Successfully installed MarkupSafe-2.0.1 Send2Trash-1.8.0 anyio-3.4.0 argon2-cffi-21.1.0 attrs-21.2.0 babel-2.9.1 backcall-0.2.0 bleach-4.1.0 certifi-2021.10.8 cffi-1.15.0 charset-normalizer-2.0.9 debugpy-1.5.1 decorator-5.1.0 defusedxml-0.7.1 entrypoints-0.3 idna-3.3 ipykernel-6.6.0 ipython-7.30.1 ipython-genutils-0.2.0 ipywidgets-7.6.5 jedi-0.18.1 jinja2-3.0.3 json5-0.9.6 jsonschema-4.2.1 jupyter-client-7.1.0 jupyter-core-4.9.1 jupyter-packaging-0.7.12 jupyter-server-1.12.1 jupyterlab-3.2.4 jupyterlab-pygments-0.1.2 jupyterlab-server-2.8.2 jupyterlab-widgets-1.0.2 matplotlib-inline-0.1.3 mistune-0.8.4 nbclassic-0.3.4 nbclient-0.5.9 nbconvert-6.3.0 nbformat-5.1.3 nest-asyncio-1.5.4 notebook-6.4.6 packaging-21.3 pandocfilters-1.5.0 parso-0.8.3 pexpect-4.8.0 pickleshare-0.7.5 prometheus-client-0.12.0 prompt-toolkit-3.0.23 ptyprocess-0.7.0 pycparser-2.21 pygments-2.10.0 pyparsing-3.0.6 pyrsistent-0.18.0 python-dateutil-2.8.2 pytz-2021.3 pyzmq-22.3.0 requests-2.26.0 setuptools-59.5.0 six-1.16.0 sniffio-1.2.0 terminado-0.12.1 testpath-0.5.0 tornado-6.1 traitlets-5.1.1 urllib3-1.26.7 wcwidth-0.2.5 webencodings-0.5.1 websocket-client-1.2.1 wheel-0.37.0 widgetsnbextension-3.5.2
2021-12-06T12:37:04,504   Installing build dependencies: finished with status 'done'
2021-12-06T12:37:04,525   Getting requirements to build wheel: started
2021-12-06T12:37:04,526   Running command /usr/bin/python3 /usr/local/lib/python3.9/dist-packages/pip/_vendor/pep517/in_process/_in_process.py get_requires_for_build_wheel /tmp/tmpqn2wcm66
2021-12-06T12:37:06,407   /usr/local/lib/python3.9/dist-packages/setuptools/dist.py:720: UserWarning: Usage of dash-separated 'description-file' will not be supported in future versions. Please use the underscore name 'description_file' instead
2021-12-06T12:37:06,408     warnings.warn(
2021-12-06T12:37:06,625   running egg_info
2021-12-06T12:37:06,629   writing igv_jupyter.egg-info/PKG-INFO
2021-12-06T12:37:06,633   writing dependency_links to igv_jupyter.egg-info/dependency_links.txt
2021-12-06T12:37:06,637   writing requirements to igv_jupyter.egg-info/requires.txt
2021-12-06T12:37:06,638   writing top-level names to igv_jupyter.egg-info/top_level.txt
2021-12-06T12:37:06,654   reading manifest file 'igv_jupyter.egg-info/SOURCES.txt'
2021-12-06T12:37:06,689   reading manifest template 'MANIFEST.in'
2021-12-06T12:37:06,705   warning: no files found matching 'igv/nbextension/static/igvjs/*'
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2021-12-06T12:37:07,083   warning: no previously-included files matching '*~' found anywhere in distribution
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2021-12-06T12:37:07,092   adding license file 'LICENSE.md'
2021-12-06T12:37:07,109   writing manifest file 'igv_jupyter.egg-info/SOURCES.txt'
2021-12-06T12:37:07,239   Getting requirements to build wheel: finished with status 'done'
2021-12-06T12:37:07,329   Created temporary directory: /tmp/pip-modern-metadata-95t74nj5
2021-12-06T12:37:07,334   Preparing metadata (pyproject.toml): started
2021-12-06T12:37:07,335   Running command /usr/bin/python3 /usr/local/lib/python3.9/dist-packages/pip/_vendor/pep517/in_process/_in_process.py prepare_metadata_for_build_wheel /tmp/tmp8ply9sgy
2021-12-06T12:37:09,227   /usr/local/lib/python3.9/dist-packages/setuptools/dist.py:720: UserWarning: Usage of dash-separated 'description-file' will not be supported in future versions. Please use the underscore name 'description_file' instead
2021-12-06T12:37:09,228     warnings.warn(
2021-12-06T12:37:09,243   running dist_info
2021-12-06T12:37:09,250   creating /tmp/pip-modern-metadata-95t74nj5/igv_jupyter.egg-info
2021-12-06T12:37:09,252   writing /tmp/pip-modern-metadata-95t74nj5/igv_jupyter.egg-info/PKG-INFO
2021-12-06T12:37:09,257   writing dependency_links to /tmp/pip-modern-metadata-95t74nj5/igv_jupyter.egg-info/dependency_links.txt
2021-12-06T12:37:09,261   writing requirements to /tmp/pip-modern-metadata-95t74nj5/igv_jupyter.egg-info/requires.txt
2021-12-06T12:37:09,262   writing top-level names to /tmp/pip-modern-metadata-95t74nj5/igv_jupyter.egg-info/top_level.txt
2021-12-06T12:37:09,265   writing manifest file '/tmp/pip-modern-metadata-95t74nj5/igv_jupyter.egg-info/SOURCES.txt'
2021-12-06T12:37:09,277   reading manifest file '/tmp/pip-modern-metadata-95t74nj5/igv_jupyter.egg-info/SOURCES.txt'
2021-12-06T12:37:09,279   reading manifest template 'MANIFEST.in'
2021-12-06T12:37:09,291   warning: no files found matching 'igv/nbextension/static/igvjs/*'
2021-12-06T12:37:09,294   warning: no files found matching 'igv/labextension/schemas/*'
2021-12-06T12:37:09,692   warning: no previously-included files matching '*~' found anywhere in distribution
2021-12-06T12:37:09,694   warning: no previously-included files matching '*.pyc' found anywhere in distribution
2021-12-06T12:37:09,695   warning: no previously-included files matching '*.pyo' found anywhere in distribution
2021-12-06T12:37:09,697   warning: no previously-included files matching '.git' found anywhere in distribution
2021-12-06T12:37:09,698   warning: no previously-included files matching '.ipynb_checkpoints' found anywhere in distribution
2021-12-06T12:37:09,699   adding license file 'LICENSE.md'
2021-12-06T12:37:09,712   writing manifest file '/tmp/pip-modern-metadata-95t74nj5/igv_jupyter.egg-info/SOURCES.txt'
2021-12-06T12:37:09,715   creating '/tmp/pip-modern-metadata-95t74nj5/igv_jupyter.dist-info'
2021-12-06T12:37:09,880   Preparing metadata (pyproject.toml): finished with status 'done'
2021-12-06T12:37:09,893   Source in /tmp/pip-wheel-sf9dhiku/igv-jupyter_c53f891389a54cfb937e09d10e7f934e has version 0.10.4, which satisfies requirement igv-jupyter==0.10.4 from https://files.pythonhosted.org/packages/ff/56/7223b22dbea919dd74457566f75e6ba25cc083fe506362af09a8703c7ba4/igv-jupyter-0.10.4.tar.gz#sha256=60c74fac451e1e28935b91c363ca411c265bc0ec17e331fa3a853c31e5fa19b1
2021-12-06T12:37:09,895   Removed igv-jupyter==0.10.4 from https://files.pythonhosted.org/packages/ff/56/7223b22dbea919dd74457566f75e6ba25cc083fe506362af09a8703c7ba4/igv-jupyter-0.10.4.tar.gz#sha256=60c74fac451e1e28935b91c363ca411c265bc0ec17e331fa3a853c31e5fa19b1 from build tracker '/tmp/pip-req-tracker-8iskm1co'
2021-12-06T12:37:09,908 Created temporary directory: /tmp/pip-unpack-18a_zjak
2021-12-06T12:37:09,909 Building wheels for collected packages: igv-jupyter
2021-12-06T12:37:09,917   Created temporary directory: /tmp/pip-wheel-gqitpvux
2021-12-06T12:37:09,917   Destination directory: /tmp/pip-wheel-gqitpvux
2021-12-06T12:37:09,922   Building wheel for igv-jupyter (pyproject.toml): started
2021-12-06T12:37:09,923   Running command /usr/bin/python3 /usr/local/lib/python3.9/dist-packages/pip/_vendor/pep517/in_process/_in_process.py build_wheel /tmp/tmp4_uomebx
2021-12-06T12:37:11,858   /usr/local/lib/python3.9/dist-packages/setuptools/dist.py:720: UserWarning: Usage of dash-separated 'description-file' will not be supported in future versions. Please use the underscore name 'description_file' instead
2021-12-06T12:37:11,860     warnings.warn(
2021-12-06T12:37:11,872   running bdist_wheel
2021-12-06T12:37:11,877   running jsdeps
2021-12-06T12:37:11,879   Installing build dependencies with npm.  This may take a while...
2021-12-06T12:37:11,880   > jlpm install
2021-12-06T12:37:15,664   Traceback (most recent call last):
2021-12-06T12:37:15,665     File "/tmp/pip-build-env-o1h2dcug/overlay/bin/jlpm", line 8, in <module>
2021-12-06T12:37:15,665       sys.exit(main())
2021-12-06T12:37:15,666     File "/tmp/pip-build-env-o1h2dcug/overlay/lib/python3.9/site-packages/jupyterlab/jlpmapp.py", line 43, in main
2021-12-06T12:37:15,666       execvp('node', ['node', YARN_PATH] + argv)
2021-12-06T12:37:15,667     File "/tmp/pip-build-env-o1h2dcug/overlay/lib/python3.9/site-packages/jupyterlab/jlpmapp.py", line 24, in execvp
2021-12-06T12:37:15,667       cmd = which(cmd)
2021-12-06T12:37:15,667     File "/tmp/pip-build-env-o1h2dcug/overlay/lib/python3.9/site-packages/jupyterlab_server/process.py", line 59, in which
2021-12-06T12:37:15,668       raise ValueError(msg)
2021-12-06T12:37:15,668   ValueError: Please install Node.js and npm before continuing installation. You may be able to install Node.js from your package manager, from conda, or directly from the Node.js website (https://nodejs.org).
2021-12-06T12:37:15,909   Traceback (most recent call last):
2021-12-06T12:37:15,910     File "/usr/local/lib/python3.9/dist-packages/pip/_vendor/pep517/in_process/_in_process.py", line 363, in <module>
2021-12-06T12:37:15,911       main()
2021-12-06T12:37:15,911     File "/usr/local/lib/python3.9/dist-packages/pip/_vendor/pep517/in_process/_in_process.py", line 345, in main
2021-12-06T12:37:15,912       json_out['return_val'] = hook(**hook_input['kwargs'])
2021-12-06T12:37:15,913     File "/usr/local/lib/python3.9/dist-packages/pip/_vendor/pep517/in_process/_in_process.py", line 261, in build_wheel
2021-12-06T12:37:15,914       return _build_backend().build_wheel(wheel_directory, config_settings,
2021-12-06T12:37:15,914     File "/usr/local/lib/python3.9/dist-packages/setuptools/build_meta.py", line 230, in build_wheel
2021-12-06T12:37:15,915       return self._build_with_temp_dir(['bdist_wheel'], '.whl',
2021-12-06T12:37:15,915     File "/usr/local/lib/python3.9/dist-packages/setuptools/build_meta.py", line 215, in _build_with_temp_dir
2021-12-06T12:37:15,916       self.run_setup()
2021-12-06T12:37:15,916     File "/usr/local/lib/python3.9/dist-packages/setuptools/build_meta.py", line 158, in run_setup
2021-12-06T12:37:15,917       exec(compile(code, __file__, 'exec'), locals())
2021-12-06T12:37:15,917     File "setup.py", line 96, in <module>
2021-12-06T12:37:15,918       setuptools.setup(**setup_args)
2021-12-06T12:37:15,918     File "/usr/local/lib/python3.9/dist-packages/setuptools/__init__.py", line 153, in setup
2021-12-06T12:37:15,919       return distutils.core.setup(**attrs)
2021-12-06T12:37:15,919     File "/usr/lib/python3.9/distutils/core.py", line 148, in setup
2021-12-06T12:37:15,920       dist.run_commands()
2021-12-06T12:37:15,920     File "/usr/lib/python3.9/distutils/dist.py", line 966, in run_commands
2021-12-06T12:37:15,922       self.run_command(cmd)
2021-12-06T12:37:15,923     File "/usr/lib/python3.9/distutils/dist.py", line 985, in run_command
2021-12-06T12:37:15,924       cmd_obj.run()
2021-12-06T12:37:15,925     File "/tmp/pip-build-env-o1h2dcug/overlay/lib/python3.9/site-packages/jupyter_packaging/setupbase.py", line 503, in run
2021-12-06T12:37:15,926       [self.run_command(cmd) for cmd in cmds]
2021-12-06T12:37:15,926     File "/tmp/pip-build-env-o1h2dcug/overlay/lib/python3.9/site-packages/jupyter_packaging/setupbase.py", line 503, in <listcomp>
2021-12-06T12:37:15,927       [self.run_command(cmd) for cmd in cmds]
2021-12-06T12:37:15,927     File "/usr/lib/python3.9/distutils/cmd.py", line 313, in run_command
2021-12-06T12:37:15,928       self.distribution.run_command(command)
2021-12-06T12:37:15,929     File "/usr/lib/python3.9/distutils/dist.py", line 985, in run_command
2021-12-06T12:37:15,930       cmd_obj.run()
2021-12-06T12:37:15,931     File "/tmp/pip-build-env-o1h2dcug/overlay/lib/python3.9/site-packages/jupyter_packaging/setupbase.py", line 424, in run
2021-12-06T12:37:15,932       self.command.run()
2021-12-06T12:37:15,932     File "/tmp/pip-build-env-o1h2dcug/overlay/lib/python3.9/site-packages/jupyter_packaging/setupbase.py", line 274, in run
2021-12-06T12:37:15,933       c.run()
2021-12-06T12:37:15,933     File "/tmp/pip-build-env-o1h2dcug/overlay/lib/python3.9/site-packages/jupyter_packaging/setupbase.py", line 379, in run
2021-12-06T12:37:15,934       run(npm_cmd + ['install'], cwd=node_package)
2021-12-06T12:37:15,935     File "/tmp/pip-build-env-o1h2dcug/overlay/lib/python3.9/site-packages/jupyter_packaging/setupbase.py", line 225, in run
2021-12-06T12:37:15,935       return subprocess.check_call(cmd, **kwargs)
2021-12-06T12:37:15,936     File "/usr/lib/python3.9/subprocess.py", line 373, in check_call
2021-12-06T12:37:15,937       raise CalledProcessError(retcode, cmd)
2021-12-06T12:37:15,937   subprocess.CalledProcessError: Command '['/tmp/pip-build-env-o1h2dcug/overlay/bin/jlpm', 'install']' returned non-zero exit status 1.
2021-12-06T12:37:16,077   Building wheel for igv-jupyter (pyproject.toml): finished with status 'error'
2021-12-06T12:37:16,081   ERROR: Failed building wheel for igv-jupyter
2021-12-06T12:37:16,085 Failed to build igv-jupyter
2021-12-06T12:37:16,086 ERROR: Failed to build one or more wheels
2021-12-06T12:37:16,087 Exception information:
2021-12-06T12:37:16,087 Traceback (most recent call last):
2021-12-06T12:37:16,087   File "/usr/local/lib/python3.9/dist-packages/pip/_internal/cli/base_command.py", line 164, in exc_logging_wrapper
2021-12-06T12:37:16,087     status = run_func(*args)
2021-12-06T12:37:16,087   File "/usr/local/lib/python3.9/dist-packages/pip/_internal/cli/req_command.py", line 205, in wrapper
2021-12-06T12:37:16,087     return func(self, options, args)
2021-12-06T12:37:16,087   File "/usr/local/lib/python3.9/dist-packages/pip/_internal/commands/wheel.py", line 175, in run
2021-12-06T12:37:16,087     raise CommandError("Failed to build one or more wheels")
2021-12-06T12:37:16,087 pip._internal.exceptions.CommandError: Failed to build one or more wheels
2021-12-06T12:37:16,095 Removed build tracker: '/tmp/pip-req-tracker-8iskm1co'