2021-12-06T13:06:20,185 Created temporary directory: /tmp/pip-ephem-wheel-cache-tphy2s95
2021-12-06T13:06:20,191 Created temporary directory: /tmp/pip-req-tracker-sydbvnbx
2021-12-06T13:06:20,192 Initialized build tracking at /tmp/pip-req-tracker-sydbvnbx
2021-12-06T13:06:20,192 Created build tracker: /tmp/pip-req-tracker-sydbvnbx
2021-12-06T13:06:20,192 Entered build tracker: /tmp/pip-req-tracker-sydbvnbx
2021-12-06T13:06:20,193 Created temporary directory: /tmp/pip-wheel-96tiusvg
2021-12-06T13:06:20,257 Looking in indexes: https://pypi.org/simple, https://www.piwheels.org/simple
2021-12-06T13:06:20,261 2 location(s) to search for versions of cgat:
2021-12-06T13:06:20,261 * https://pypi.org/simple/cgat/
2021-12-06T13:06:20,261 * https://www.piwheels.org/simple/cgat/
2021-12-06T13:06:20,262 Fetching project page and analyzing links: https://pypi.org/simple/cgat/
2021-12-06T13:06:20,263 Getting page https://pypi.org/simple/cgat/
2021-12-06T13:06:20,267 Found index url https://pypi.org/simple
2021-12-06T13:06:20,575   Found link https://files.pythonhosted.org/packages/82/a0/23011460a9548932524dd5b17d18b02e1803b5b638b78503f2b9319837a7/CGAT-0.1.tar.gz#sha256=ddfa2dd7c465607ff3a26a15c79d3172be5dfd0a5ddbee46436073a00afc8962 (from https://pypi.org/simple/cgat/), version: 0.1
2021-12-06T13:06:20,576   Found link https://files.pythonhosted.org/packages/90/20/9ecc442d1b6d352d72480376b3713a29875b9dbaf0d72bb820e4bfc9bf28/CGAT-0.1.1.tar.gz#sha256=c4f19fd4b02050245b3902edf55a65de971015fb26e4e6361ab6ed35b8baa729 (from https://pypi.org/simple/cgat/), version: 0.1.1
2021-12-06T13:06:20,576   Found link https://files.pythonhosted.org/packages/e4/fe/5858c1d7f331982f24326b8220a0c54564c069435cce5bde568ceb9b4373/CGAT-0.1.3.tar.gz#sha256=7a0056da88f6fa57c108af63632e95e06804bdc6041b42c85de48c84daa8f7f9 (from https://pypi.org/simple/cgat/), version: 0.1.3
2021-12-06T13:06:20,577   Found link https://files.pythonhosted.org/packages/96/85/e31f136aab7e0803f82c62e1a9f0dd5d17d873ea3892ec1e4dfc759f7f51/CGAT-0.1.4.tar.gz#sha256=cfa92f36d599510fda0abb3728e96ef6643593d4c91fcc6094cad894684de633 (from https://pypi.org/simple/cgat/), version: 0.1.4
2021-12-06T13:06:20,578   Found link https://files.pythonhosted.org/packages/ba/e8/1ef67c7be3f57254b74c41b89e6b79112ed7360226d891d15fcc95b95cfd/CGAT-0.1.5.tar.gz#sha256=8db06f98b11ea48d3b91db991f5786e5c60ef6e3130418e755bcf6bb75e590a7 (from https://pypi.org/simple/cgat/), version: 0.1.5
2021-12-06T13:06:20,578   Found link https://files.pythonhosted.org/packages/13/ca/99f09c68029bc1cd011c8c946a74fd9b970a40a26bc54eb279bd0f0045c2/CGAT-0.1.6.tar.gz#sha256=33dc3014a113efcdd2adfee5f558603099463c3d4f8df79ede06f4217af78674 (from https://pypi.org/simple/cgat/), version: 0.1.6
2021-12-06T13:06:20,579   Found link https://files.pythonhosted.org/packages/94/b0/2d158572aa0ec70826ac5805d5fd5a42631dcb8f2ea0d6150dfc41794212/CGAT-0.1.7.tar.gz#sha256=f3e24fe22d5341bfc57b720ecc4808076962b0af53fab0aae98b7915aec97607 (from https://pypi.org/simple/cgat/), version: 0.1.7
2021-12-06T13:06:20,580   Found link https://files.pythonhosted.org/packages/c9/96/19787a37483d45b902ce2378bce0ee6ca1c538b253fb0eb28b5b23b7d7a5/CGAT-0.1.8.tar.gz#sha256=f5ec266e005ce9f9dae0a3d32149b5b3f6aa6b4e65658761393f3a1bcfd10fd8 (from https://pypi.org/simple/cgat/), version: 0.1.8
2021-12-06T13:06:20,580   Found link https://files.pythonhosted.org/packages/f2/d1/ca23c8156b4ae13b7b82e02b56055a9cf7a6d3eb38f28c39898da8a5784c/CGAT-0.1.9.tar.gz#sha256=a49f4d00c5337e0d99bc50bd184b4fd45db01103a832135ad9df107cfa76cf41 (from https://pypi.org/simple/cgat/), version: 0.1.9
2021-12-06T13:06:20,581   Found link https://files.pythonhosted.org/packages/c5/97/065fec28bcca210fadaa3be6f1b149922d69bff46ed56debf746355b2372/CGAT-0.2.0.tar.gz#sha256=56d2adb9a15b963c74a5a2b40d751f0b45bf4a3d4ffb3f062172b0830866be9f (from https://pypi.org/simple/cgat/), version: 0.2.0
2021-12-06T13:06:20,582   Found link https://files.pythonhosted.org/packages/2e/e8/3fe3d5cfb0348a9e13f87f253265a6906f4d41391137506f46c0019af93c/CGAT-0.2.1.tar.gz#sha256=de026223daa30fbfc6f4e72b2842e29ea54d99c5524a0116117a6b9873de0234 (from https://pypi.org/simple/cgat/), version: 0.2.1
2021-12-06T13:06:20,583   Found link https://files.pythonhosted.org/packages/d7/dd/870a8ff2404e9786faa3dd3ca8d6ae65d58dc7a6e4470cbd6d08c1646d84/CGAT-0.2.2.tar.gz#sha256=331ec1f5913a3ddb76bc41b72a9fc336739526f74f329f85853e8fcc6e4b0ac1 (from https://pypi.org/simple/cgat/), version: 0.2.2
2021-12-06T13:06:20,583   Found link https://files.pythonhosted.org/packages/f2/f3/b80f5dad0f604ca68840639f5ac64147768b044b8f0797d7bc1fb8d69ba7/CGAT-0.2.3.tar.gz#sha256=75ba018ad71a9776cfb83bedfd6c66d39c5f019cddb97f307c0be9af08aba95e (from https://pypi.org/simple/cgat/), version: 0.2.3
2021-12-06T13:06:20,584   Found link https://files.pythonhosted.org/packages/05/d5/d8deed8eebc26c37a4e463345a137ab5e0d4fa0ac9dc92617bc12f495f43/CGAT-0.2.4.tar.gz#sha256=a15f68579358d6506afa94690876041b37fbe4e64887a140b793de8720231003 (from https://pypi.org/simple/cgat/), version: 0.2.4
2021-12-06T13:06:20,585   Found link https://files.pythonhosted.org/packages/89/75/6a2b039d71228269b1aa918bc640646cb55ad6d047a497c55dc11778ae42/CGAT-0.2.5.tar.gz#sha256=eeb990c0b7423b57e4e11e5deb891076be73e7d19d2725dbc53b17271f9cd683 (from https://pypi.org/simple/cgat/), version: 0.2.5
2021-12-06T13:06:20,585   Found link https://files.pythonhosted.org/packages/fe/86/be2a14843dc272abe33dd0de754e8ba142fc07c3cfe11410be7230d27078/CGAT-0.2.6.tar.gz#sha256=a7f1ffe13981fe95ecface2ae86c80a48914799713e674512b6355be8c7f8b0b (from https://pypi.org/simple/cgat/), version: 0.2.6
2021-12-06T13:06:20,586   Found link https://files.pythonhosted.org/packages/a3/ff/e5f2175450e1a362b941d96afd139a4c66ad884765cfe7d7bb7d9a735a95/CGAT-0.2.7.tar.gz#sha256=6976ab4b2888583ab9516f3e68f91f7ccd2a5a3c3614d71042fd22e3389a4aa6 (from https://pypi.org/simple/cgat/), version: 0.2.7
2021-12-06T13:06:20,587   Found link https://files.pythonhosted.org/packages/ba/39/a13ca9d92ef0caf2852617fff6ebdb8e83697bb1a2e61fb9dc4608f5e4f9/CGAT-0.3.0.tar.gz#sha256=4ea98ae7a35d7422712a89784efde70f393bbdce24902770a7cbb4dc3313e6ee (from https://pypi.org/simple/cgat/), version: 0.3.0
2021-12-06T13:06:20,587   Found link https://files.pythonhosted.org/packages/4a/4e/775ffc1bf3c9a7e13ffd22ce69cb9d61826c69855f0523225977f9884bdc/CGAT-0.3.1.tar.gz#sha256=16a9d03f6fae3f1fe1481eb3d388da4353178bdd996e1b9c01e6b030eabdd69f (from https://pypi.org/simple/cgat/), version: 0.3.1
2021-12-06T13:06:20,588   Found link https://files.pythonhosted.org/packages/88/19/c19e9e16c3b8e19f05381c780f3583eae2982c91c163ee8e2aa3311eec7e/CGAT-0.3.2.tar.gz#sha256=986fcada180d943df1ba4666c173c1b7e7b209bdbf9755571c2b946617a53386 (from https://pypi.org/simple/cgat/), version: 0.3.2
2021-12-06T13:06:20,588   Found link https://files.pythonhosted.org/packages/af/31/d29170e58d6fc06571753b9b54f6aad686a376d310e87b0810099e8bbbac/CGAT-0.3.3.tar.gz#sha256=f00686ab3bb22b2d69acd608cd9d4db7786b06988afcef55d499b064d1e855bd (from https://pypi.org/simple/cgat/), version: 0.3.3
2021-12-06T13:06:20,589   Found link https://files.pythonhosted.org/packages/46/9f/4131b77f952d136662feba4cdc9562115f3eddf2dddf6cbc2bb7c0f3299c/cgat-0.5.1.tar.gz#sha256=5254102752cab2c7ee4fc056eb5e2df288d813cd3ffd3dd9b759c22a9bf9d2c3 (from https://pypi.org/simple/cgat/), version: 0.5.1
2021-12-06T13:06:20,590   Found link https://files.pythonhosted.org/packages/9e/8e/83ff5d238ac6bc75be300a50bcfbb64ebe77d90b053ef094db1af962abda/cgat-0.5.2.tar.gz#sha256=0a2f1a1047aebdbb3c2240ebca85cf136b63baca99661353235cc95e3a45ac50 (from https://pypi.org/simple/cgat/), version: 0.5.2
2021-12-06T13:06:20,590   Found link https://files.pythonhosted.org/packages/d7/05/6518cd6bf64bc0d15f474ea707979b8a47d502b2ee7c043d3a5e33f602c9/cgat-0.5.3.tar.gz#sha256=2ea78bcee73c0aa2427466efe4dab3d6b035089bb42cc735480dafe5ceb2f191 (from https://pypi.org/simple/cgat/), version: 0.5.3
2021-12-06T13:06:20,591   Found link https://files.pythonhosted.org/packages/b6/58/4a88bde62300df47727a502c91b91a1e5d3399c4f72715c3a802bcd19faa/cgat-0.5.4.tar.gz#sha256=df54c25707ba87e42c853cd6e851ba672de1f1ffea6c122e1408229a53b007a8 (from https://pypi.org/simple/cgat/), version: 0.5.4
2021-12-06T13:06:20,592   Found link https://files.pythonhosted.org/packages/dc/54/bce4257afde6befa7728b1911c1b2499b8a6edbc51e5ab6bca7d7c5dd70a/cgat-0.5.5.tar.gz#sha256=e03ceddbd8b94be3cf92c720b42a0fc36f2b228b6cce88a097c26c646bef092c (from https://pypi.org/simple/cgat/), version: 0.5.5
2021-12-06T13:06:20,592   Found link https://files.pythonhosted.org/packages/c6/30/6c6b3d2820998a407c14b540e0b656de4177d36cb427ffe1ac8bb90c2e82/cgat-0.5.6.tar.gz#sha256=e728f51696f9d23bea1553b3f11474b024e13902bf6ecd13a14481966b166ae1 (from https://pypi.org/simple/cgat/), version: 0.5.6
2021-12-06T13:06:20,593   Found link https://files.pythonhosted.org/packages/0e/10/ebbb6959f3d636e59a3572e3f864dacf9f89246406bf962baf17e041da8b/cgat-0.6.0.tar.gz#sha256=d851076158ac9244bb71b36bf8637cddbcf92c681af89bb0a379963bd32e2e64 (from https://pypi.org/simple/cgat/), version: 0.6.0
2021-12-06T13:06:20,594   Found link https://files.pythonhosted.org/packages/c9/4c/0883d231913824036e12e6285f27632973b3a37e6f1e2131df843a66fe67/cgat-0.6.2.tar.gz#sha256=e7d6852f69409ce7c325bb913cffd04edaa9df5e8e75f7d35c378017c9561c8a (from https://pypi.org/simple/cgat/), version: 0.6.2
2021-12-06T13:06:20,594   Found link https://files.pythonhosted.org/packages/8f/54/f60bc2a2fafe1f80e95537255d184abf7ddf10e3ea32ec825d9dbd856c68/cgat-0.6.3.tar.gz#sha256=5dc0b092a7edf2740be0c04c3719f11b4bad2ed3397106bbaf8a6c4bf5522512 (from https://pypi.org/simple/cgat/), version: 0.6.3
2021-12-06T13:06:20,595   Found link https://files.pythonhosted.org/packages/97/88/3c7b98b4c6db4d539d8807416c0aad0fed4e2967ef02adef5e9422073581/cgat-0.6.4.tar.gz#sha256=9ec800fd8a928d058ad2ccfab810bd25089e44f9f3aadfa7e874dac659f2e21e (from https://pypi.org/simple/cgat/), version: 0.6.4
2021-12-06T13:06:20,596   Found link https://files.pythonhosted.org/packages/3f/a8/9a48c094a91bc3ce135636a8680246d017acb366fe7ee50acdbec071ad53/cgat-0.6.5.tar.gz#sha256=c2350e2e1e6897839537b0ed17b4a03140141d0f0c15cb804e6e7aa12e2d2b70 (from https://pypi.org/simple/cgat/), version: 0.6.5
2021-12-06T13:06:20,597 Fetching project page and analyzing links: https://www.piwheels.org/simple/cgat/
2021-12-06T13:06:20,597 Getting page https://www.piwheels.org/simple/cgat/
2021-12-06T13:06:20,599 Found index url https://www.piwheels.org/simple
2021-12-06T13:06:20,829 Skipping link: not a file: https://www.piwheels.org/simple/cgat/
2021-12-06T13:06:20,829 Skipping link: not a file: https://pypi.org/simple/cgat/
2021-12-06T13:06:20,872 Given no hashes to check 1 links for project 'cgat': discarding no candidates
2021-12-06T13:06:20,902 Collecting cgat==0.6.5
2021-12-06T13:06:20,905   Created temporary directory: /tmp/pip-unpack-ukd7ql2x
2021-12-06T13:06:20,992   Downloading cgat-0.6.5.tar.gz (484 kB)
2021-12-06T13:06:22,009   Added cgat==0.6.5 from https://files.pythonhosted.org/packages/3f/a8/9a48c094a91bc3ce135636a8680246d017acb366fe7ee50acdbec071ad53/cgat-0.6.5.tar.gz#sha256=c2350e2e1e6897839537b0ed17b4a03140141d0f0c15cb804e6e7aa12e2d2b70 to build tracker '/tmp/pip-req-tracker-sydbvnbx'
2021-12-06T13:06:22,011   Running setup.py (path:/tmp/pip-wheel-96tiusvg/cgat_c3a1952ea38048d2aa54a367a8e27f8c/setup.py) egg_info for package cgat
2021-12-06T13:06:22,012   Created temporary directory: /tmp/pip-pip-egg-info-h2c1mfmj
2021-12-06T13:06:22,013   Preparing metadata (setup.py): started
2021-12-06T13:06:22,013   Running command python setup.py egg_info
2021-12-06T13:06:23,980   Traceback (most recent call last):
2021-12-06T13:06:23,981     File "/tmp/pip-wheel-96tiusvg/cgat_c3a1952ea38048d2aa54a367a8e27f8c/setup.py", line 29, in <module>
2021-12-06T13:06:23,982       import pysam
2021-12-06T13:06:23,982   ModuleNotFoundError: No module named 'pysam'

2021-12-06T13:06:23,983   During handling of the above exception, another exception occurred:

2021-12-06T13:06:23,984   Traceback (most recent call last):
2021-12-06T13:06:23,984     File "<string>", line 1, in <module>
2021-12-06T13:06:23,985     File "/tmp/pip-wheel-96tiusvg/cgat_c3a1952ea38048d2aa54a367a8e27f8c/setup.py", line 32, in <module>
2021-12-06T13:06:23,985       "the CGAT code collection requires pysam to "
2021-12-06T13:06:23,986   ImportError: the CGAT code collection requires pysam to be installed before running setup.py (pip install pysam)
2021-12-06T13:06:24,128   Preparing metadata (setup.py): finished with status 'error'
2021-12-06T13:06:24,129 WARNING: Discarding https://files.pythonhosted.org/packages/3f/a8/9a48c094a91bc3ce135636a8680246d017acb366fe7ee50acdbec071ad53/cgat-0.6.5.tar.gz#sha256=c2350e2e1e6897839537b0ed17b4a03140141d0f0c15cb804e6e7aa12e2d2b70 (from https://pypi.org/simple/cgat/). Command errored out with exit status 1: python setup.py egg_info Check the logs for full command output.
2021-12-06T13:06:24,133 ERROR: Could not find a version that satisfies the requirement cgat==0.6.5 (from versions: 0.1, 0.1.1, 0.1.3, 0.1.4, 0.1.5, 0.1.6, 0.1.7, 0.1.8, 0.1.9, 0.2.0, 0.2.1, 0.2.2, 0.2.3, 0.2.4, 0.2.5, 0.2.6, 0.2.7, 0.3.0, 0.3.1, 0.3.2, 0.3.3, 0.5.1, 0.5.2, 0.5.3, 0.5.4, 0.5.5, 0.5.6, 0.6.0, 0.6.2, 0.6.3, 0.6.4, 0.6.5)
2021-12-06T13:06:24,134 ERROR: No matching distribution found for cgat==0.6.5
2021-12-06T13:06:24,135 Exception information:
2021-12-06T13:06:24,135 Traceback (most recent call last):
2021-12-06T13:06:24,135   File "/usr/local/lib/python3.7/dist-packages/pip/_vendor/resolvelib/resolvers.py", line 349, in resolve
2021-12-06T13:06:24,135     self._add_to_criteria(self.state.criteria, r, parent=None)
2021-12-06T13:06:24,135   File "/usr/local/lib/python3.7/dist-packages/pip/_vendor/resolvelib/resolvers.py", line 174, in _add_to_criteria
2021-12-06T13:06:24,135     raise RequirementsConflicted(criterion)
2021-12-06T13:06:24,135 pip._vendor.resolvelib.resolvers.RequirementsConflicted: Requirements conflict: SpecifierRequirement('cgat==0.6.5')
2021-12-06T13:06:24,135 
2021-12-06T13:06:24,135 During handling of the above exception, another exception occurred:
2021-12-06T13:06:24,135 
2021-12-06T13:06:24,135 Traceback (most recent call last):
2021-12-06T13:06:24,135   File "/usr/local/lib/python3.7/dist-packages/pip/_internal/resolution/resolvelib/resolver.py", line 93, in resolve
2021-12-06T13:06:24,135     collected.requirements, max_rounds=try_to_avoid_resolution_too_deep
2021-12-06T13:06:24,135   File "/usr/local/lib/python3.7/dist-packages/pip/_vendor/resolvelib/resolvers.py", line 482, in resolve
2021-12-06T13:06:24,135     state = resolution.resolve(requirements, max_rounds=max_rounds)
2021-12-06T13:06:24,135   File "/usr/local/lib/python3.7/dist-packages/pip/_vendor/resolvelib/resolvers.py", line 351, in resolve
2021-12-06T13:06:24,135     raise ResolutionImpossible(e.criterion.information)
2021-12-06T13:06:24,135 pip._vendor.resolvelib.resolvers.ResolutionImpossible: [RequirementInformation(requirement=SpecifierRequirement('cgat==0.6.5'), parent=None)]
2021-12-06T13:06:24,135 
2021-12-06T13:06:24,135 The above exception was the direct cause of the following exception:
2021-12-06T13:06:24,135 
2021-12-06T13:06:24,135 Traceback (most recent call last):
2021-12-06T13:06:24,135   File "/usr/local/lib/python3.7/dist-packages/pip/_internal/cli/base_command.py", line 164, in exc_logging_wrapper
2021-12-06T13:06:24,135     status = run_func(*args)
2021-12-06T13:06:24,135   File "/usr/local/lib/python3.7/dist-packages/pip/_internal/cli/req_command.py", line 205, in wrapper
2021-12-06T13:06:24,135     return func(self, options, args)
2021-12-06T13:06:24,135   File "/usr/local/lib/python3.7/dist-packages/pip/_internal/commands/wheel.py", line 144, in run
2021-12-06T13:06:24,135     requirement_set = resolver.resolve(reqs, check_supported_wheels=True)
2021-12-06T13:06:24,135   File "/usr/local/lib/python3.7/dist-packages/pip/_internal/resolution/resolvelib/resolver.py", line 101, in resolve
2021-12-06T13:06:24,135     raise error from e
2021-12-06T13:06:24,135 pip._internal.exceptions.DistributionNotFound: No matching distribution found for cgat==0.6.5
2021-12-06T13:06:24,145 Removed cgat==0.6.5 from https://files.pythonhosted.org/packages/3f/a8/9a48c094a91bc3ce135636a8680246d017acb366fe7ee50acdbec071ad53/cgat-0.6.5.tar.gz#sha256=c2350e2e1e6897839537b0ed17b4a03140141d0f0c15cb804e6e7aa12e2d2b70 from build tracker '/tmp/pip-req-tracker-sydbvnbx'
2021-12-06T13:06:24,145 Removed build tracker: '/tmp/pip-req-tracker-sydbvnbx'