2021-12-07T14:13:00,522 Created temporary directory: /tmp/pip-ephem-wheel-cache-83uab9tx 2021-12-07T14:13:00,528 Created temporary directory: /tmp/pip-req-tracker-_9auf1g2 2021-12-07T14:13:00,528 Initialized build tracking at /tmp/pip-req-tracker-_9auf1g2 2021-12-07T14:13:00,529 Created build tracker: /tmp/pip-req-tracker-_9auf1g2 2021-12-07T14:13:00,529 Entered build tracker: /tmp/pip-req-tracker-_9auf1g2 2021-12-07T14:13:00,530 Created temporary directory: /tmp/pip-wheel-bqzzy3pg 2021-12-07T14:13:00,600 Looking in indexes: https://pypi.org/simple, https://www.piwheels.org/simple 2021-12-07T14:13:00,605 2 location(s) to search for versions of whatshap: 2021-12-07T14:13:00,605 * https://pypi.org/simple/whatshap/ 2021-12-07T14:13:00,605 * https://www.piwheels.org/simple/whatshap/ 2021-12-07T14:13:00,606 Fetching project page and analyzing links: https://pypi.org/simple/whatshap/ 2021-12-07T14:13:00,607 Getting page https://pypi.org/simple/whatshap/ 2021-12-07T14:13:00,611 Found index url https://pypi.org/simple 2021-12-07T14:13:00,856 Found link https://files.pythonhosted.org/packages/35/95/43ff2304cd59ade39e64aadaeaec48e8c12bbe6262bcbbbd7b7d89487757/whatshap-0.9.tar.gz#sha256=beaadbc79e4d463b5e441b8e9a13b5345c07db3d91fb093cee1bfebfebae4442 (from https://pypi.org/simple/whatshap/), version: 0.9 2021-12-07T14:13:00,857 Found link https://files.pythonhosted.org/packages/f0/4b/f2b882803ac66b969414d8427ee8b4ca2c29b17cfead0fd85f349dc66983/whatshap-0.10.tar.gz#sha256=864d4ecfc33eac7265452f5a2f468a830779afc53e723119ecac5ecf73255acc (from https://pypi.org/simple/whatshap/), version: 0.10 2021-12-07T14:13:00,857 Found link https://files.pythonhosted.org/packages/fc/dc/30559c28fb54985773fb242f5768fc206e054e44e45962a32cf4fd29a794/whatshap-0.11.tar.gz#sha256=d0367a4dd0adf288d30a9a87b565e4f141745bec3ea825cb85ac3409a593bde9 (from https://pypi.org/simple/whatshap/), version: 0.11 2021-12-07T14:13:00,858 Found link https://files.pythonhosted.org/packages/01/84/31a5ea338647d0256a4a5c57e98d7a563f387e6a47f1e26299b89e3f2da1/whatshap-0.12.tar.gz#sha256=c65060155dc901e4d4bd48077706660e5b214540d4dc20575a8b2146fb6a11f9 (from https://pypi.org/simple/whatshap/), version: 0.12 2021-12-07T14:13:00,859 Found link https://files.pythonhosted.org/packages/e2/f3/c71cb4bc3ba3b1234ee0c5fe729c60440164e07437695ca09c61750e0e11/whatshap-0.13.tar.gz#sha256=529646db74b2cac9f12ebd530bd7bb40cb073c367894bf66c5994c1d7f32b56a (from https://pypi.org/simple/whatshap/), version: 0.13 2021-12-07T14:13:00,859 Found link https://files.pythonhosted.org/packages/cd/d3/a63285d15b0da196a259197e46d9f61a852d1b3c94800f4a82ca4e31e307/whatshap-0.14.tar.gz#sha256=dd6076e67c5a4ce75d2510b3dbdd3c1e524124be62655f06c82f7d9fce4c5643 (from https://pypi.org/simple/whatshap/), version: 0.14 2021-12-07T14:13:00,860 Found link https://files.pythonhosted.org/packages/ec/d4/d6c19b716926895ee3def919ab23194212172ed5cf89ccb91c2949fb258d/whatshap-0.14.1.tar.gz#sha256=7b5781f1138b1830c4627451d1d5c77e7f2a3c5403510d9ab2a63f545911415b (from https://pypi.org/simple/whatshap/), version: 0.14.1 2021-12-07T14:13:00,861 Found link https://files.pythonhosted.org/packages/ca/13/6454e5e8f6c858a203378b3e22f13518f092ba85aa6d7a9a9796d22c28e0/whatshap-0.15.tar.gz#sha256=2dc9d89d71cf99e10c71b6138edd456bfcf0d7355794bc3491078654df85bc38 (from https://pypi.org/simple/whatshap/), version: 0.15 2021-12-07T14:13:00,862 Found link https://files.pythonhosted.org/packages/3d/cb/55730a8713ecba10f6d987dbd935ba31ded92f9af1ddd250896f3c1cfc3b/whatshap-0.16.tar.gz#sha256=1df54d8705fb0451cc0a640918842481087f7b741778dfb4100cc1f4f60f48fe (from https://pypi.org/simple/whatshap/), version: 0.16 2021-12-07T14:13:00,862 Found link https://files.pythonhosted.org/packages/79/11/79da12b8c23f43b00fab8a6206f75cc1cc8c1902ff30eca53c17abe2f633/whatshap-0.17.tar.gz#sha256=8ad1c66789fe5fe957b3695902dae3c3fd4e67f79b9e349b92b532e9ff618933 (from https://pypi.org/simple/whatshap/), version: 0.17 2021-12-07T14:13:00,863 Skipping link: No binaries permitted for whatshap: https://files.pythonhosted.org/packages/97/19/5758de9357d2639e81f774dffd5227278df2df7f56e81f080098f00c8d5a/whatshap-0.18-cp34-cp34m-manylinux1_x86_64.whl#sha256=4a09adc24c6db3bd525667ac2559181dc94ee203a64f488dfce1ac38cbf44ba5 (from https://pypi.org/simple/whatshap/) (requires-python:>=3.4) 2021-12-07T14:13:00,863 Skipping link: No binaries permitted for whatshap: https://files.pythonhosted.org/packages/d0/72/94dc654f66164a351a1a9540e28b4bdf34a81046fbf26b5955725bea2f64/whatshap-0.18-cp35-cp35m-manylinux1_x86_64.whl#sha256=1c99980629655e58a34496b0e1b1c9123dddd0797a13cf681dcf83f92a6f33e0 (from https://pypi.org/simple/whatshap/) (requires-python:>=3.4) 2021-12-07T14:13:00,864 Skipping link: No binaries permitted for whatshap: https://files.pythonhosted.org/packages/0a/50/c9c89e7f3a59251a91e618165ccc2586b626643a4c59dfd8d1b32f9b6bbb/whatshap-0.18-cp36-cp36m-manylinux1_x86_64.whl#sha256=fdadadbed86cc7a7abd8f9ef3d55fe280eda957473db03dc30ad06ace6b877bd (from https://pypi.org/simple/whatshap/) (requires-python:>=3.4) 2021-12-07T14:13:00,865 Skipping link: No binaries permitted for whatshap: https://files.pythonhosted.org/packages/32/77/e9e6f3e15a89ea87b0a3ed50e99af2a375a897707eb8b4c81209af918ff0/whatshap-0.18-cp37-cp37m-manylinux1_x86_64.whl#sha256=2e189cb51c2527444dada90f8fd2355ddfe8d9d35aca386330e63bc46c2d2699 (from https://pypi.org/simple/whatshap/) (requires-python:>=3.4) 2021-12-07T14:13:00,866 Found link https://files.pythonhosted.org/packages/f0/e4/4392c2f1320ea8d4b79a76e3a6dcb9bd7bf6ed70e11499c9acf2db2d42ef/whatshap-0.18.tar.gz#sha256=c566130eca57fe9e34f5193390856dc44171c397f9708c49fcbf204e575b6695 (from https://pypi.org/simple/whatshap/) (requires-python:>=3.4), version: 0.18 2021-12-07T14:13:00,867 Skipping link: No binaries permitted for whatshap: https://files.pythonhosted.org/packages/0f/f5/78e5fa758144941f08b1de923889c7123e4d20368837904fc004592b6ec9/whatshap-1.0-cp36-cp36m-manylinux2010_x86_64.whl#sha256=ff945c6a0406f328771dbbc86970bd48a0327833ca8e96ad836a55ab32ae99d4 (from https://pypi.org/simple/whatshap/) (requires-python:>=3.6) 2021-12-07T14:13:00,867 Skipping link: No binaries permitted for whatshap: https://files.pythonhosted.org/packages/42/cb/53a1a2a160846a225c6184da26e8f6d6577f5af378e3a90aab728bb5b504/whatshap-1.0-cp37-cp37m-manylinux2010_x86_64.whl#sha256=78bacd81697878129a6ff39f9474792f85b95e6fde7bfa30371b87a24d5e9d3a (from https://pypi.org/simple/whatshap/) (requires-python:>=3.6) 2021-12-07T14:13:00,868 Skipping link: No binaries permitted for whatshap: https://files.pythonhosted.org/packages/63/91/5aaa2ec02a362e784d7be43f43b1e243fa9153ef5d9ab3ada91759638444/whatshap-1.0-cp38-cp38-manylinux2010_x86_64.whl#sha256=62318377e996d1f3040cbfdb3462a3140dbdfd4113584c9000b530ca70bbf223 (from https://pypi.org/simple/whatshap/) (requires-python:>=3.6) 2021-12-07T14:13:00,869 Found link https://files.pythonhosted.org/packages/c0/c8/98036e04fb95249128d6b49ca61691e1d8eea484dd94611f90efb5857174/whatshap-1.0.tar.gz#sha256=fcf0495793998da94054bdc4c6d6f3f6b145a7befa07ac96275e5e2272979aa2 (from https://pypi.org/simple/whatshap/) (requires-python:>=3.6), version: 1.0 2021-12-07T14:13:00,870 Skipping link: No binaries permitted for whatshap: https://files.pythonhosted.org/packages/8a/fb/dfaa97a9ec1fe333dcd730498376d33bc21de017760b633d8dd84f9cd9f6/whatshap-1.1-cp36-cp36m-manylinux2010_x86_64.whl#sha256=93af99ab08fac60bb3e46cde68978619f095e1b47490f59e4085f338ad715b46 (from https://pypi.org/simple/whatshap/) (requires-python:>=3.6) 2021-12-07T14:13:00,870 Skipping link: No binaries permitted for whatshap: https://files.pythonhosted.org/packages/37/4e/a06bd339ea7179e750d49fec27caba7a6b364f608b5126105770333a6dfa/whatshap-1.1-cp37-cp37m-manylinux2010_x86_64.whl#sha256=94c04469069a87636c8aaf88d9f3e33022864de633327fedfdedd8da2bc4c6aa (from https://pypi.org/simple/whatshap/) (requires-python:>=3.6) 2021-12-07T14:13:00,871 Skipping link: No binaries permitted for whatshap: https://files.pythonhosted.org/packages/2b/61/3000e39650a20faf011d74e41c3a6e3eea11195b1dad6cc8398665539363/whatshap-1.1-cp38-cp38-manylinux2010_x86_64.whl#sha256=7821711be901f898437a6be4993a15e77edbb59683ffa76d3dc9bc1bf855769a (from https://pypi.org/simple/whatshap/) (requires-python:>=3.6) 2021-12-07T14:13:00,871 Skipping link: No binaries permitted for whatshap: https://files.pythonhosted.org/packages/37/1a/f9708037de73715099098762c13e8e0681129041d41fb0ab508004ed2aa7/whatshap-1.1-cp39-cp39-manylinux2010_x86_64.whl#sha256=9e3a3169de452412c4e5cfe3220c0d51178d4811f33183e53069c57de49253ae (from https://pypi.org/simple/whatshap/) (requires-python:>=3.6) 2021-12-07T14:13:00,872 Found link https://files.pythonhosted.org/packages/94/69/20b124a032b37c73ac56708744cbf2542cbc3e31390f261853ca5a6f62fe/whatshap-1.1.tar.gz#sha256=4e6486e6ce2babf55a225dd9e0030df6fcc27629d34803428cbe88a79137bb6f (from https://pypi.org/simple/whatshap/) (requires-python:>=3.6), version: 1.1 2021-12-07T14:13:00,873 Skipping link: No binaries permitted for whatshap: https://files.pythonhosted.org/packages/ce/5e/0c32569323ea5e7c036cd9344aa669d92e4a30bbcd4a00dda5483dad67a4/whatshap-1.2-cp36-cp36m-manylinux_2_12_x86_64.manylinux2010_x86_64.whl#sha256=cb4a11ab89e8b71ad557dd404bb80e41a9990812190d42a2d6389f1b0157d8af (from https://pypi.org/simple/whatshap/) (requires-python:>=3.6) 2021-12-07T14:13:00,874 Skipping link: No binaries permitted for whatshap: https://files.pythonhosted.org/packages/c0/b0/0055bf0099361e24f02851b3df68d75e1165a7e13d8b6c4a5bbf1215f924/whatshap-1.2-cp37-cp37m-manylinux_2_12_x86_64.manylinux2010_x86_64.whl#sha256=ebea3b0418f817764f171cd151586fedcde6d43cf9c8b8ad744b9f209aabb775 (from https://pypi.org/simple/whatshap/) (requires-python:>=3.6) 2021-12-07T14:13:00,874 Skipping link: No binaries permitted for whatshap: https://files.pythonhosted.org/packages/43/09/3fe5c7130f5356b2b7b911539b52c090e2ee6532c14fc3f29fdbf6c2b569/whatshap-1.2-cp38-cp38-manylinux_2_12_x86_64.manylinux2010_x86_64.whl#sha256=29058e18ef6916b4a0285691617e41b1246b61460c8962fd578a2de17009834b (from https://pypi.org/simple/whatshap/) (requires-python:>=3.6) 2021-12-07T14:13:00,875 Skipping link: No binaries permitted for whatshap: https://files.pythonhosted.org/packages/d1/af/55a5fe140b3a0491c7a19b961b8b6275573194827fb52c17908b2e2699b5/whatshap-1.2-cp39-cp39-manylinux_2_12_x86_64.manylinux2010_x86_64.whl#sha256=363927b1d9eb491bd80db6e917dc9b5926e2886f041126a0157c1f852d8ec766 (from https://pypi.org/simple/whatshap/) (requires-python:>=3.6) 2021-12-07T14:13:00,876 Found link https://files.pythonhosted.org/packages/24/ba/a6b7ded0e342f0cdeb268e0e92b1c0812ca9c0804e11efc8c4e7e5cb6be9/whatshap-1.2.tar.gz#sha256=e8d55c5c9a3e0c681f0d4dccdaa9096cbfffc440d9ea9ec6be51918bdaaa87c5 (from https://pypi.org/simple/whatshap/) (requires-python:>=3.6), version: 1.2 2021-12-07T14:13:00,877 Skipping link: No binaries permitted for whatshap: https://files.pythonhosted.org/packages/19/36/1423d4adb6f4d7e58f5fdf8c59aaa8b5cec9d73bb5b2450f17f4089e8438/whatshap-1.2.1-cp36-cp36m-manylinux_2_12_x86_64.manylinux2010_x86_64.whl#sha256=11a7b10eef76a40dabb98226c774d048c62140d033da474aebb9a5e27b300fb3 (from https://pypi.org/simple/whatshap/) (requires-python:>=3.6) 2021-12-07T14:13:00,877 Skipping link: No binaries permitted for whatshap: https://files.pythonhosted.org/packages/3f/9c/52ce1b726a9b98f628c468b30877edc720c6c8022ae0d13fee6088f894b6/whatshap-1.2.1-cp37-cp37m-manylinux_2_12_x86_64.manylinux2010_x86_64.whl#sha256=b53bb0c0b4298622256ca8b32d0c16108f99e7fa8bbf50bab109b6359685e538 (from https://pypi.org/simple/whatshap/) (requires-python:>=3.6) 2021-12-07T14:13:00,878 Skipping link: No binaries permitted for whatshap: https://files.pythonhosted.org/packages/22/c1/d7295d4b3732dc286990b85348401b3bf932bdcb196162f14100472683f3/whatshap-1.2.1-cp38-cp38-manylinux_2_12_x86_64.manylinux2010_x86_64.whl#sha256=08e79b8e86c9b8d47e5a0dac79bac3c66f984d6eb93b9649901b67b1a0545af5 (from https://pypi.org/simple/whatshap/) (requires-python:>=3.6) 2021-12-07T14:13:00,878 Skipping link: No binaries permitted for whatshap: https://files.pythonhosted.org/packages/ff/36/181d416f2c1557879d2647e73964bd0d5d2fd3b79376ec3463435d2363ba/whatshap-1.2.1-cp39-cp39-manylinux_2_12_x86_64.manylinux2010_x86_64.whl#sha256=f152af4c4dc555820596121472bf44f5554370e641d70c332d3de6e624bf5e27 (from https://pypi.org/simple/whatshap/) (requires-python:>=3.6) 2021-12-07T14:13:00,879 Found link https://files.pythonhosted.org/packages/e1/e3/84376a94a15622efc336fe72ffb37d448b91abfe5fa21421684495e30eb9/whatshap-1.2.1.tar.gz#sha256=123a3282fc5e1eacd7fe1bf953735ddc3f0cedacb469f05c3a90233b76ef3cb8 (from https://pypi.org/simple/whatshap/) (requires-python:>=3.6), version: 1.2.1 2021-12-07T14:13:00,880 Fetching project page and analyzing links: https://www.piwheels.org/simple/whatshap/ 2021-12-07T14:13:00,881 Getting page https://www.piwheels.org/simple/whatshap/ 2021-12-07T14:13:00,883 Found index url https://www.piwheels.org/simple 2021-12-07T14:13:01,144 Skipping link: No binaries permitted for whatshap: https://www.piwheels.org/simple/whatshap/whatshap-0.10-cp34-cp34m-linux_armv6l.whl#sha256=4833edfe84ef3c9eeb5c68262dad5be3a637379d59eae98ed10774ee66a5a925 (from https://www.piwheels.org/simple/whatshap/) 2021-12-07T14:13:01,145 Skipping link: No binaries permitted for whatshap: https://www.piwheels.org/simple/whatshap/whatshap-0.10-cp34-cp34m-linux_armv7l.whl#sha256=4833edfe84ef3c9eeb5c68262dad5be3a637379d59eae98ed10774ee66a5a925 (from https://www.piwheels.org/simple/whatshap/) 2021-12-07T14:13:01,146 Skipping link: No binaries permitted for whatshap: https://www.piwheels.org/simple/whatshap/whatshap-0.11-cp34-cp34m-linux_armv6l.whl#sha256=528f0411be5d1bd6559dd1531b52beb67ca918a09fd418fd2921199f88ff71ef (from https://www.piwheels.org/simple/whatshap/) 2021-12-07T14:13:01,146 Skipping link: No binaries permitted for whatshap: https://www.piwheels.org/simple/whatshap/whatshap-0.11-cp34-cp34m-linux_armv7l.whl#sha256=528f0411be5d1bd6559dd1531b52beb67ca918a09fd418fd2921199f88ff71ef (from https://www.piwheels.org/simple/whatshap/) 2021-12-07T14:13:01,147 Skipping link: No binaries permitted for whatshap: https://www.piwheels.org/simple/whatshap/whatshap-0.11-cp35-cp35m-linux_armv6l.whl#sha256=48a0027e08f6762e26e61673a253a95ecda25e8f32a31a8cbd3655365c25c051 (from https://www.piwheels.org/simple/whatshap/) 2021-12-07T14:13:01,147 Skipping link: No binaries permitted for whatshap: https://www.piwheels.org/simple/whatshap/whatshap-0.11-cp35-cp35m-linux_armv7l.whl#sha256=48a0027e08f6762e26e61673a253a95ecda25e8f32a31a8cbd3655365c25c051 (from https://www.piwheels.org/simple/whatshap/) 2021-12-07T14:13:01,148 Skipping link: No binaries permitted for whatshap: https://www.piwheels.org/simple/whatshap/whatshap-0.12-cp34-cp34m-linux_armv6l.whl#sha256=61ca54a67abc75d161b394f41a6a10efa1b7e25ce94a20fb5e17bf768fbcc153 (from https://www.piwheels.org/simple/whatshap/) 2021-12-07T14:13:01,148 Skipping link: No binaries permitted for whatshap: https://www.piwheels.org/simple/whatshap/whatshap-0.12-cp34-cp34m-linux_armv7l.whl#sha256=61ca54a67abc75d161b394f41a6a10efa1b7e25ce94a20fb5e17bf768fbcc153 (from https://www.piwheels.org/simple/whatshap/) 2021-12-07T14:13:01,149 Skipping link: No binaries permitted for whatshap: https://www.piwheels.org/simple/whatshap/whatshap-0.12-cp35-cp35m-linux_armv6l.whl#sha256=77398db6e7b93ab468c1a87e64d128696987ae7573bf6bb87d6d4ad6853c68cd (from https://www.piwheels.org/simple/whatshap/) 2021-12-07T14:13:01,149 Skipping link: No binaries permitted for whatshap: https://www.piwheels.org/simple/whatshap/whatshap-0.12-cp35-cp35m-linux_armv7l.whl#sha256=77398db6e7b93ab468c1a87e64d128696987ae7573bf6bb87d6d4ad6853c68cd (from https://www.piwheels.org/simple/whatshap/) 2021-12-07T14:13:01,150 Skipping link: No binaries permitted for whatshap: https://www.piwheels.org/simple/whatshap/whatshap-0.13-cp34-cp34m-linux_armv6l.whl#sha256=856ee3772161445e2245334076268dca61b504968b90dab43b07943ed6ddeebd (from https://www.piwheels.org/simple/whatshap/) 2021-12-07T14:13:01,150 Skipping link: No binaries permitted for whatshap: https://www.piwheels.org/simple/whatshap/whatshap-0.13-cp34-cp34m-linux_armv7l.whl#sha256=856ee3772161445e2245334076268dca61b504968b90dab43b07943ed6ddeebd (from https://www.piwheels.org/simple/whatshap/) 2021-12-07T14:13:01,151 Skipping link: No binaries permitted for whatshap: https://www.piwheels.org/simple/whatshap/whatshap-0.13-cp35-cp35m-linux_armv6l.whl#sha256=7989e2894821071f43ee744ecc59f1abfa98748cf39719c28c881e6098c74037 (from https://www.piwheels.org/simple/whatshap/) 2021-12-07T14:13:01,151 Skipping link: No binaries permitted for whatshap: https://www.piwheels.org/simple/whatshap/whatshap-0.13-cp35-cp35m-linux_armv7l.whl#sha256=7989e2894821071f43ee744ecc59f1abfa98748cf39719c28c881e6098c74037 (from https://www.piwheels.org/simple/whatshap/) 2021-12-07T14:13:01,152 Skipping link: No binaries permitted for whatshap: https://www.piwheels.org/simple/whatshap/whatshap-0.14-cp34-cp34m-linux_armv6l.whl#sha256=3ddde88fb4fed1664ec3d46039aca72142fa5dcde177a40f49c2cec09b407f9f (from https://www.piwheels.org/simple/whatshap/) 2021-12-07T14:13:01,152 Skipping link: No binaries permitted for whatshap: https://www.piwheels.org/simple/whatshap/whatshap-0.14-cp34-cp34m-linux_armv7l.whl#sha256=3ddde88fb4fed1664ec3d46039aca72142fa5dcde177a40f49c2cec09b407f9f (from https://www.piwheels.org/simple/whatshap/) 2021-12-07T14:13:01,153 Skipping link: No binaries permitted for whatshap: https://www.piwheels.org/simple/whatshap/whatshap-0.14-cp35-cp35m-linux_armv6l.whl#sha256=e0ac1dca2abae0b88b1fa764b4d4ca853bb6bc4b02de20b09e8d51448b20aafc (from https://www.piwheels.org/simple/whatshap/) 2021-12-07T14:13:01,153 Skipping link: No binaries permitted for whatshap: https://www.piwheels.org/simple/whatshap/whatshap-0.14-cp35-cp35m-linux_armv7l.whl#sha256=e0ac1dca2abae0b88b1fa764b4d4ca853bb6bc4b02de20b09e8d51448b20aafc (from https://www.piwheels.org/simple/whatshap/) 2021-12-07T14:13:01,154 Skipping link: No binaries permitted for whatshap: https://www.piwheels.org/simple/whatshap/whatshap-0.14.1-cp34-cp34m-linux_armv6l.whl#sha256=22ddc6e868a47bcdfd91808303be8ad0d952e65ae74767ea3d49bdd16cdfb4f2 (from https://www.piwheels.org/simple/whatshap/) 2021-12-07T14:13:01,154 Skipping link: No binaries permitted for whatshap: https://www.piwheels.org/simple/whatshap/whatshap-0.14.1-cp34-cp34m-linux_armv7l.whl#sha256=22ddc6e868a47bcdfd91808303be8ad0d952e65ae74767ea3d49bdd16cdfb4f2 (from https://www.piwheels.org/simple/whatshap/) 2021-12-07T14:13:01,155 Skipping link: No binaries permitted for whatshap: https://www.piwheels.org/simple/whatshap/whatshap-0.14.1-cp35-cp35m-linux_armv6l.whl#sha256=d814d13967bc9b15f994573546cdeed83bac50694e44fb4105c3ae83bbfd97b7 (from https://www.piwheels.org/simple/whatshap/) 2021-12-07T14:13:01,156 Skipping link: No binaries permitted for whatshap: https://www.piwheels.org/simple/whatshap/whatshap-0.14.1-cp35-cp35m-linux_armv7l.whl#sha256=d814d13967bc9b15f994573546cdeed83bac50694e44fb4105c3ae83bbfd97b7 (from https://www.piwheels.org/simple/whatshap/) 2021-12-07T14:13:01,156 Skipping link: No binaries permitted for whatshap: https://www.piwheels.org/simple/whatshap/whatshap-0.15-cp34-cp34m-linux_armv6l.whl#sha256=8a603d7a9a636e78f0f8297e9ad41b9b829dc8bb2bed01428406d595852b7bb8 (from https://www.piwheels.org/simple/whatshap/) 2021-12-07T14:13:01,157 Skipping link: No binaries permitted for whatshap: https://www.piwheels.org/simple/whatshap/whatshap-0.15-cp34-cp34m-linux_armv7l.whl#sha256=8a603d7a9a636e78f0f8297e9ad41b9b829dc8bb2bed01428406d595852b7bb8 (from https://www.piwheels.org/simple/whatshap/) 2021-12-07T14:13:01,157 Skipping link: No binaries permitted for whatshap: https://www.piwheels.org/simple/whatshap/whatshap-0.15-cp35-cp35m-linux_armv6l.whl#sha256=11a60ad9e4b9824b86108d6157dbb52400aaa31d739e08a8ccefaac8f79e4d3c (from https://www.piwheels.org/simple/whatshap/) 2021-12-07T14:13:01,158 Skipping link: No binaries permitted for whatshap: https://www.piwheels.org/simple/whatshap/whatshap-0.15-cp35-cp35m-linux_armv7l.whl#sha256=11a60ad9e4b9824b86108d6157dbb52400aaa31d739e08a8ccefaac8f79e4d3c (from https://www.piwheels.org/simple/whatshap/) 2021-12-07T14:13:01,158 Skipping link: No binaries permitted for whatshap: https://www.piwheels.org/simple/whatshap/whatshap-0.15-cp37-cp37m-linux_armv6l.whl#sha256=fe3e47cf1e67574d1d04b795d1d03a06c7c8248004a6f79aed017577f212dfac (from https://www.piwheels.org/simple/whatshap/) 2021-12-07T14:13:01,159 Skipping link: No binaries permitted for whatshap: https://www.piwheels.org/simple/whatshap/whatshap-0.15-cp37-cp37m-linux_armv7l.whl#sha256=fe3e47cf1e67574d1d04b795d1d03a06c7c8248004a6f79aed017577f212dfac (from https://www.piwheels.org/simple/whatshap/) 2021-12-07T14:13:01,159 Skipping link: No binaries permitted for whatshap: https://www.piwheels.org/simple/whatshap/whatshap-0.16-cp34-cp34m-linux_armv6l.whl#sha256=f220db8040faaacd90867ade6d504314e1412588bf15490cd43486b80012a5cb (from https://www.piwheels.org/simple/whatshap/) 2021-12-07T14:13:01,160 Skipping link: No binaries permitted for whatshap: https://www.piwheels.org/simple/whatshap/whatshap-0.16-cp34-cp34m-linux_armv7l.whl#sha256=f220db8040faaacd90867ade6d504314e1412588bf15490cd43486b80012a5cb (from https://www.piwheels.org/simple/whatshap/) 2021-12-07T14:13:01,160 Skipping link: No binaries permitted for whatshap: https://www.piwheels.org/simple/whatshap/whatshap-0.16-cp35-cp35m-linux_armv6l.whl#sha256=e89c850742d969409e79942e188b0ccef03000e5991929a628b61e75ccf48baa (from https://www.piwheels.org/simple/whatshap/) 2021-12-07T14:13:01,161 Skipping link: No binaries permitted for whatshap: https://www.piwheels.org/simple/whatshap/whatshap-0.16-cp35-cp35m-linux_armv7l.whl#sha256=e89c850742d969409e79942e188b0ccef03000e5991929a628b61e75ccf48baa (from https://www.piwheels.org/simple/whatshap/) 2021-12-07T14:13:01,161 Skipping link: No binaries permitted for whatshap: https://www.piwheels.org/simple/whatshap/whatshap-0.17-cp34-cp34m-linux_armv6l.whl#sha256=57ed4c07b260ca5103118fe34d7875af69bcda84b3267f3c8a96147f5475b355 (from https://www.piwheels.org/simple/whatshap/) 2021-12-07T14:13:01,162 Skipping link: No binaries permitted for whatshap: https://www.piwheels.org/simple/whatshap/whatshap-0.17-cp34-cp34m-linux_armv7l.whl#sha256=57ed4c07b260ca5103118fe34d7875af69bcda84b3267f3c8a96147f5475b355 (from https://www.piwheels.org/simple/whatshap/) 2021-12-07T14:13:01,162 Skipping link: No binaries permitted for whatshap: https://www.piwheels.org/simple/whatshap/whatshap-0.17-cp35-cp35m-linux_armv6l.whl#sha256=bcc411757fef61409f32f77b8b87266850cb245c80f7e55030a701e7e8f9aaf2 (from https://www.piwheels.org/simple/whatshap/) 2021-12-07T14:13:01,163 Skipping link: No binaries permitted for whatshap: https://www.piwheels.org/simple/whatshap/whatshap-0.17-cp35-cp35m-linux_armv7l.whl#sha256=bcc411757fef61409f32f77b8b87266850cb245c80f7e55030a701e7e8f9aaf2 (from https://www.piwheels.org/simple/whatshap/) 2021-12-07T14:13:01,163 Skipping link: No binaries permitted for whatshap: https://www.piwheels.org/simple/whatshap/whatshap-0.17-cp37-cp37m-linux_armv6l.whl#sha256=a52131a2cecf121ac6b1d8a2f3d6b6f81722f159121dddb88c43589f05db1c48 (from https://www.piwheels.org/simple/whatshap/) 2021-12-07T14:13:01,163 Skipping link: No binaries permitted for whatshap: https://www.piwheels.org/simple/whatshap/whatshap-0.17-cp37-cp37m-linux_armv7l.whl#sha256=a52131a2cecf121ac6b1d8a2f3d6b6f81722f159121dddb88c43589f05db1c48 (from https://www.piwheels.org/simple/whatshap/) 2021-12-07T14:13:01,164 Skipping link: No binaries permitted for whatshap: https://www.piwheels.org/simple/whatshap/whatshap-0.18-cp34-cp34m-linux_armv6l.whl#sha256=226c2159db0239fcad3b0d9731ae11ad7f161e18a0f51b5d76fbb7aa02bc5b12 (from https://www.piwheels.org/simple/whatshap/) (requires-python:>=3.4) 2021-12-07T14:13:01,164 Skipping link: No binaries permitted for whatshap: https://www.piwheels.org/simple/whatshap/whatshap-0.18-cp34-cp34m-linux_armv7l.whl#sha256=226c2159db0239fcad3b0d9731ae11ad7f161e18a0f51b5d76fbb7aa02bc5b12 (from https://www.piwheels.org/simple/whatshap/) (requires-python:>=3.4) 2021-12-07T14:13:01,165 Skipping link: No binaries permitted for whatshap: https://www.piwheels.org/simple/whatshap/whatshap-0.18-cp35-cp35m-linux_armv6l.whl#sha256=a01e2ba831e1062cac18678005ed864422821a147a90381d1d561db6daaa240b (from https://www.piwheels.org/simple/whatshap/) (requires-python:>=3.4) 2021-12-07T14:13:01,166 Skipping link: No binaries permitted for whatshap: https://www.piwheels.org/simple/whatshap/whatshap-0.18-cp35-cp35m-linux_armv7l.whl#sha256=a01e2ba831e1062cac18678005ed864422821a147a90381d1d561db6daaa240b (from https://www.piwheels.org/simple/whatshap/) (requires-python:>=3.4) 2021-12-07T14:13:01,166 Skipping link: No binaries permitted for whatshap: https://www.piwheels.org/simple/whatshap/whatshap-0.18-cp37-cp37m-linux_armv6l.whl#sha256=b81040280694883d7079a4b3e449bba14fc4d30f293e9a1d76a1e0578ac01cba (from https://www.piwheels.org/simple/whatshap/) (requires-python:>=3.4) 2021-12-07T14:13:01,166 Skipping link: No binaries permitted for whatshap: https://www.piwheels.org/simple/whatshap/whatshap-0.18-cp37-cp37m-linux_armv7l.whl#sha256=b81040280694883d7079a4b3e449bba14fc4d30f293e9a1d76a1e0578ac01cba (from https://www.piwheels.org/simple/whatshap/) (requires-python:>=3.4) 2021-12-07T14:13:01,167 Skipping link: No binaries permitted for whatshap: https://www.piwheels.org/simple/whatshap/whatshap-0.9-cp34-cp34m-linux_armv6l.whl#sha256=78adbda77e2ec4fe0f66ea86826ad8d025f743ba6bbf39d050783ec1cb07c83a (from https://www.piwheels.org/simple/whatshap/) 2021-12-07T14:13:01,167 Skipping link: No binaries permitted for whatshap: https://www.piwheels.org/simple/whatshap/whatshap-0.9-cp34-cp34m-linux_armv7l.whl#sha256=78adbda77e2ec4fe0f66ea86826ad8d025f743ba6bbf39d050783ec1cb07c83a (from https://www.piwheels.org/simple/whatshap/) 2021-12-07T14:13:01,168 Skipping link: No binaries permitted for whatshap: https://www.piwheels.org/simple/whatshap/whatshap-0.9-cp35-cp35m-linux_armv6l.whl#sha256=d3ebf8ce2fc15a5397ece9beb236c6e54c2653d414d727f48aae8e025b674a14 (from https://www.piwheels.org/simple/whatshap/) 2021-12-07T14:13:01,168 Skipping link: No binaries permitted for whatshap: https://www.piwheels.org/simple/whatshap/whatshap-0.9-cp35-cp35m-linux_armv7l.whl#sha256=d3ebf8ce2fc15a5397ece9beb236c6e54c2653d414d727f48aae8e025b674a14 (from https://www.piwheels.org/simple/whatshap/) 2021-12-07T14:13:01,169 Skipping link: not a file: https://www.piwheels.org/simple/whatshap/ 2021-12-07T14:13:01,169 Skipping link: not a file: https://pypi.org/simple/whatshap/ 2021-12-07T14:13:01,206 Given no hashes to check 1 links for project 'whatshap': discarding no candidates 2021-12-07T14:13:01,236 Collecting whatshap==1.2.1 2021-12-07T14:13:01,239 Created temporary directory: /tmp/pip-unpack-uikra8pf 2021-12-07T14:13:01,759 Downloading whatshap-1.2.1.tar.gz (5.1 MB) 2021-12-07T14:13:04,671 Added whatshap==1.2.1 from https://files.pythonhosted.org/packages/e1/e3/84376a94a15622efc336fe72ffb37d448b91abfe5fa21421684495e30eb9/whatshap-1.2.1.tar.gz#sha256=123a3282fc5e1eacd7fe1bf953735ddc3f0cedacb469f05c3a90233b76ef3cb8 to build tracker '/tmp/pip-req-tracker-_9auf1g2' 2021-12-07T14:13:04,683 Created temporary directory: /tmp/pip-build-env-p2iqbizq 2021-12-07T14:13:04,697 Created temporary directory: /tmp/pip-standalone-pip-flz1p1sa 2021-12-07T14:13:06,431 Installing build dependencies: started 2021-12-07T14:13:06,432 Running command /usr/bin/python3 /tmp/pip-standalone-pip-flz1p1sa/__env_pip__.zip/pip install --ignore-installed --no-user --prefix /tmp/pip-build-env-p2iqbizq/overlay --no-warn-script-location -v --no-binary whatshap --only-binary :none: -i https://pypi.org/simple --extra-index-url https://www.piwheels.org/simple --prefer-binary -- 'setuptools>=43' wheel setuptools_scm 'cython~=0.29.20' 2021-12-07T14:13:14,171 Using pip 21.3.1 from /tmp/pip-standalone-pip-flz1p1sa/__env_pip__.zip/pip (python 3.7) 2021-12-07T14:13:14,964 Looking in indexes: https://pypi.org/simple, https://www.piwheels.org/simple 2021-12-07T14:13:19,639 Collecting setuptools>=43 2021-12-07T14:13:19,858 Using cached https://www.piwheels.org/simple/setuptools/setuptools-59.5.0-py3-none-any.whl (952 kB) 2021-12-07T14:13:20,591 Collecting wheel 2021-12-07T14:13:20,624 Using cached https://www.piwheels.org/simple/wheel/wheel-0.37.0-py2.py3-none-any.whl (35 kB) 2021-12-07T14:13:21,739 Collecting setuptools_scm 2021-12-07T14:13:21,775 Using cached https://www.piwheels.org/simple/setuptools-scm/setuptools_scm-6.3.2-py3-none-any.whl (33 kB) 2021-12-07T14:13:26,457 Collecting cython~=0.29.20 2021-12-07T14:13:27,433 Using cached https://www.piwheels.org/simple/cython/Cython-0.29.25-cp37-cp37m-linux_armv7l.whl (4.6 MB) 2021-12-07T14:13:28,169 Collecting tomli>=1.0.0 2021-12-07T14:13:28,184 Using cached tomli-1.2.2-py3-none-any.whl (12 kB) 2021-12-07T14:13:28,670 Collecting packaging>=20.0 2021-12-07T14:13:28,703 Using cached https://www.piwheels.org/simple/packaging/packaging-21.3-py3-none-any.whl (40 kB) 2021-12-07T14:13:29,572 Collecting pyparsing!=3.0.5,>=2.0.2 2021-12-07T14:13:29,609 Using cached https://www.piwheels.org/simple/pyparsing/pyparsing-3.0.6-py3-none-any.whl (97 kB) 2021-12-07T14:13:33,146 Installing collected packages: pyparsing, tomli, setuptools, packaging, wheel, setuptools-scm, cython 2021-12-07T14:13:37,147 Creating /tmp/pip-build-env-p2iqbizq/overlay/bin 2021-12-07T14:13:37,150 changing mode of /tmp/pip-build-env-p2iqbizq/overlay/bin/wheel to 755 2021-12-07T14:13:42,870 changing mode of /tmp/pip-build-env-p2iqbizq/overlay/bin/cygdb to 755 2021-12-07T14:13:42,873 changing mode of /tmp/pip-build-env-p2iqbizq/overlay/bin/cython to 755 2021-12-07T14:13:42,876 changing mode of /tmp/pip-build-env-p2iqbizq/overlay/bin/cythonize to 755 2021-12-07T14:13:42,938 Successfully installed cython-0.29.25 packaging-21.3 pyparsing-3.0.6 setuptools-59.5.0 setuptools-scm-6.3.2 tomli-1.2.2 wheel-0.37.0 2021-12-07T14:13:43,572 Installing build dependencies: finished with status 'done' 2021-12-07T14:13:43,594 Getting requirements to build wheel: started 2021-12-07T14:13:43,594 Running command /usr/bin/python3 /usr/local/lib/python3.7/dist-packages/pip/_vendor/pep517/in_process/_in_process.py get_requires_for_build_wheel /tmp/tmp1ubgjzw8 2021-12-07T14:13:47,405 running egg_info 2021-12-07T14:13:47,408 writing whatshap.egg-info/PKG-INFO 2021-12-07T14:13:47,412 writing dependency_links to whatshap.egg-info/dependency_links.txt 2021-12-07T14:13:47,415 writing entry points to whatshap.egg-info/entry_points.txt 2021-12-07T14:13:47,417 writing requirements to whatshap.egg-info/requires.txt 2021-12-07T14:13:47,419 writing top-level names to whatshap.egg-info/top_level.txt 2021-12-07T14:13:47,543 listing git files failed - pretending there aren't any 2021-12-07T14:13:47,567 reading manifest file 'whatshap.egg-info/SOURCES.txt' 2021-12-07T14:13:47,651 reading manifest template 'MANIFEST.in' 2021-12-07T14:13:47,677 adding license file 'LICENSE' 2021-12-07T14:13:47,716 writing manifest file 'whatshap.egg-info/SOURCES.txt' 2021-12-07T14:13:47,905 Getting requirements to build wheel: finished with status 'done' 2021-12-07T14:13:47,929 Created temporary directory: /tmp/pip-modern-metadata-3k0g88sn 2021-12-07T14:13:47,935 Preparing metadata (pyproject.toml): started 2021-12-07T14:13:47,936 Running command /usr/bin/python3 /usr/local/lib/python3.7/dist-packages/pip/_vendor/pep517/in_process/_in_process.py prepare_metadata_for_build_wheel /tmp/tmph9zuo6mh 2021-12-07T14:13:51,541 running dist_info 2021-12-07T14:13:51,569 creating /tmp/pip-modern-metadata-3k0g88sn/whatshap.egg-info 2021-12-07T14:13:51,570 writing /tmp/pip-modern-metadata-3k0g88sn/whatshap.egg-info/PKG-INFO 2021-12-07T14:13:51,574 writing dependency_links to /tmp/pip-modern-metadata-3k0g88sn/whatshap.egg-info/dependency_links.txt 2021-12-07T14:13:51,576 writing entry points to /tmp/pip-modern-metadata-3k0g88sn/whatshap.egg-info/entry_points.txt 2021-12-07T14:13:51,579 writing requirements to /tmp/pip-modern-metadata-3k0g88sn/whatshap.egg-info/requires.txt 2021-12-07T14:13:51,580 writing top-level names to /tmp/pip-modern-metadata-3k0g88sn/whatshap.egg-info/top_level.txt 2021-12-07T14:13:51,583 writing manifest file '/tmp/pip-modern-metadata-3k0g88sn/whatshap.egg-info/SOURCES.txt' 2021-12-07T14:13:51,693 listing git files failed - pretending there aren't any 2021-12-07T14:13:51,716 reading manifest file '/tmp/pip-modern-metadata-3k0g88sn/whatshap.egg-info/SOURCES.txt' 2021-12-07T14:13:51,719 reading manifest template 'MANIFEST.in' 2021-12-07T14:13:51,740 adding license file 'LICENSE' 2021-12-07T14:13:51,757 writing manifest file '/tmp/pip-modern-metadata-3k0g88sn/whatshap.egg-info/SOURCES.txt' 2021-12-07T14:13:51,759 creating '/tmp/pip-modern-metadata-3k0g88sn/whatshap.dist-info' 2021-12-07T14:13:51,901 adding license file "LICENSE" (matched pattern "LICEN[CS]E*") 2021-12-07T14:13:52,095 Preparing metadata (pyproject.toml): finished with status 'done' 2021-12-07T14:13:52,110 Source in /tmp/pip-wheel-bqzzy3pg/whatshap_47fe532c20c9442abd86f8f3ae5dabea has version 1.2.1, which satisfies requirement whatshap==1.2.1 from https://files.pythonhosted.org/packages/e1/e3/84376a94a15622efc336fe72ffb37d448b91abfe5fa21421684495e30eb9/whatshap-1.2.1.tar.gz#sha256=123a3282fc5e1eacd7fe1bf953735ddc3f0cedacb469f05c3a90233b76ef3cb8 2021-12-07T14:13:52,112 Removed whatshap==1.2.1 from https://files.pythonhosted.org/packages/e1/e3/84376a94a15622efc336fe72ffb37d448b91abfe5fa21421684495e30eb9/whatshap-1.2.1.tar.gz#sha256=123a3282fc5e1eacd7fe1bf953735ddc3f0cedacb469f05c3a90233b76ef3cb8 from build tracker '/tmp/pip-req-tracker-_9auf1g2' 2021-12-07T14:13:52,126 Created temporary directory: /tmp/pip-unpack-i9g1iqnb 2021-12-07T14:13:52,127 Building wheels for collected packages: whatshap 2021-12-07T14:13:52,135 Created temporary directory: /tmp/pip-wheel-1xp4p7hk 2021-12-07T14:13:52,136 Destination directory: /tmp/pip-wheel-1xp4p7hk 2021-12-07T14:13:52,141 Building wheel for whatshap (pyproject.toml): started 2021-12-07T14:13:52,142 Running command /usr/bin/python3 /usr/local/lib/python3.7/dist-packages/pip/_vendor/pep517/in_process/_in_process.py build_wheel /tmp/tmperin702k 2021-12-07T14:13:55,672 running bdist_wheel 2021-12-07T14:13:55,680 running build 2021-12-07T14:13:55,681 running build_py 2021-12-07T14:13:55,690 creating build 2021-12-07T14:13:55,690 creating build/lib.linux-armv7l-3.7 2021-12-07T14:13:55,692 creating build/lib.linux-armv7l-3.7/whatshap 2021-12-07T14:13:55,694 copying whatshap/bam.py -> build/lib.linux-armv7l-3.7/whatshap 2021-12-07T14:13:55,698 copying whatshap/math.py -> build/lib.linux-armv7l-3.7/whatshap 2021-12-07T14:13:55,702 copying whatshap/polyphaseplots.py -> build/lib.linux-armv7l-3.7/whatshap 2021-12-07T14:13:55,706 copying whatshap/__init__.py -> build/lib.linux-armv7l-3.7/whatshap 2021-12-07T14:13:55,709 copying whatshap/timer.py -> build/lib.linux-armv7l-3.7/whatshap 2021-12-07T14:13:55,712 copying whatshap/threading.py -> build/lib.linux-armv7l-3.7/whatshap 2021-12-07T14:13:55,718 copying whatshap/variant.py -> build/lib.linux-armv7l-3.7/whatshap 2021-12-07T14:13:55,721 copying whatshap/merge.py -> build/lib.linux-armv7l-3.7/whatshap 2021-12-07T14:13:55,725 copying whatshap/args.py -> build/lib.linux-armv7l-3.7/whatshap 2021-12-07T14:13:55,729 copying whatshap/testhelpers.py -> build/lib.linux-armv7l-3.7/whatshap 2021-12-07T14:13:55,732 copying whatshap/_version.py -> build/lib.linux-armv7l-3.7/whatshap 2021-12-07T14:13:55,735 copying whatshap/pedigree.py -> build/lib.linux-armv7l-3.7/whatshap 2021-12-07T14:13:55,739 copying whatshap/graph.py -> build/lib.linux-armv7l-3.7/whatshap 2021-12-07T14:13:55,742 copying whatshap/variants.py -> build/lib.linux-armv7l-3.7/whatshap 2021-12-07T14:13:55,747 copying whatshap/vcf.py -> build/lib.linux-armv7l-3.7/whatshap 2021-12-07T14:13:55,753 copying whatshap/coverage.py -> build/lib.linux-armv7l-3.7/whatshap 2021-12-07T14:13:55,757 copying whatshap/utils.py -> build/lib.linux-armv7l-3.7/whatshap 2021-12-07T14:13:55,760 copying whatshap/__main__.py -> build/lib.linux-armv7l-3.7/whatshap 2021-12-07T14:13:55,764 copying whatshap/verification.py -> build/lib.linux-armv7l-3.7/whatshap 2021-12-07T14:13:55,769 creating build/lib.linux-armv7l-3.7/whatshap/cli 2021-12-07T14:13:55,770 copying whatshap/cli/stats.py -> build/lib.linux-armv7l-3.7/whatshap/cli 2021-12-07T14:13:55,775 copying whatshap/cli/__init__.py -> build/lib.linux-armv7l-3.7/whatshap/cli 2021-12-07T14:13:55,779 copying whatshap/cli/haplotag.py -> build/lib.linux-armv7l-3.7/whatshap/cli 2021-12-07T14:13:55,784 copying whatshap/cli/unphase.py -> build/lib.linux-armv7l-3.7/whatshap/cli 2021-12-07T14:13:55,787 copying whatshap/cli/find_snv_candidates.py -> build/lib.linux-armv7l-3.7/whatshap/cli 2021-12-07T14:13:55,791 copying whatshap/cli/polyphase.py -> build/lib.linux-armv7l-3.7/whatshap/cli 2021-12-07T14:13:55,797 copying whatshap/cli/phase.py -> build/lib.linux-armv7l-3.7/whatshap/cli 2021-12-07T14:13:55,804 copying whatshap/cli/split.py -> build/lib.linux-armv7l-3.7/whatshap/cli 2021-12-07T14:13:55,809 copying whatshap/cli/genotype.py -> build/lib.linux-armv7l-3.7/whatshap/cli 2021-12-07T14:13:55,815 copying whatshap/cli/compare.py -> build/lib.linux-armv7l-3.7/whatshap/cli 2021-12-07T14:13:55,823 copying whatshap/cli/hapcut2vcf.py -> build/lib.linux-armv7l-3.7/whatshap/cli 2021-12-07T14:13:55,833 running build_ext 2021-12-07T14:13:55,846 building 'whatshap.core' extension 2021-12-07T14:13:55,850 creating build/temp.linux-armv7l-3.7 2021-12-07T14:13:55,851 creating build/temp.linux-armv7l-3.7/whatshap 2021-12-07T14:13:55,853 creating build/temp.linux-armv7l-3.7/src 2021-12-07T14:13:55,857 creating build/temp.linux-armv7l-3.7/src/hapchat 2021-12-07T14:13:55,859 creating build/temp.linux-armv7l-3.7/src/polyphase 2021-12-07T14:13:55,861 arm-linux-gnueabihf-gcc -pthread -DNDEBUG -g -fwrapv -O2 -Wall -g -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -UNDEBUG -I/usr/include/python3.7m -c whatshap/core.cpp -o build/temp.linux-armv7l-3.7/whatshap/core.o -std=c++11 -Werror=return-type -Werror=narrowing 2021-12-07T14:14:01,324 In file included from whatshap/core.cpp:783: 2021-12-07T14:14:01,325 whatshap/../src/hapchat/hapchatcore.cpp: In member function ‘void HapChatCore::run_core()’: 2021-12-07T14:14:01,325 whatshap/../src/hapchat/hapchatcore.cpp:145:11: warning: variable ‘counter_columns’ set but not used [-Wunused-but-set-variable] 2021-12-07T14:14:01,326 Counter counter_columns; 2021-12-07T14:14:01,326 ^~~~~~~~~~~~~~~ 2021-12-07T14:14:01,342 whatshap/../src/hapchat/hapchatcore.cpp: In member function ‘bool HapChatCore::check_end(HapChatColumnIterator, const std::vector >&, const Pointer&, const bool&)’: 2021-12-07T14:14:01,342 whatshap/../src/hapchat/hapchatcore.cpp:208:74: warning: comparison of integer expressions of different signedness: ‘unsigned int’ and ‘int’ [-Wsign-compare] 2021-12-07T14:14:01,342 return (!re_run && (hap.is_ended() && (input[pointer][0].get_read_id() == -1))); 2021-12-07T14:14:01,343 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~ 2021-12-07T14:14:01,575 In file included from whatshap/core.cpp:783: 2021-12-07T14:14:01,575 whatshap/../src/hapchat/hapchatcore.cpp: In member function ‘void HapChatCore::dp(const constants_t&, std::vector&, std::vector&, Counter&, Cost&, Counter&, Counter&, Counter&, Counter&, HapChatColumnIterator)’: 2021-12-07T14:14:01,576 whatshap/../src/hapchat/hapchatcore.cpp:939:8: warning: unused variable ‘old_k’ [-Wunused-variable] 2021-12-07T14:14:01,576 int old_k = k_j[input_pointer]; 2021-12-07T14:14:01,576 ^~~~~ 2021-12-07T14:14:01,608 whatshap/../src/hapchat/hapchatcore.cpp: In member function ‘void HapChatCore::intersect(const Column&, const Column&, const Pointer&, std::vector >&, std::vector >&, std::vector >&, std::vector&, const bool&)’: 2021-12-07T14:14:01,609 whatshap/../src/hapchat/hapchatcore.cpp:1114:33: warning: comparison of integer expressions of different signedness: ‘unsigned int’ and ‘int’ [-Wsign-compare] 2021-12-07T14:14:01,609 (colJ[j].get_read_id() != -1) && 2021-12-07T14:14:01,610 ~~~~~~~~~~~~~~~~~~~~~~^~~~~ 2021-12-07T14:14:01,610 whatshap/../src/hapchat/hapchatcore.cpp:1115:33: warning: comparison of integer expressions of different signedness: ‘unsigned int’ and ‘int’ [-Wsign-compare] 2021-12-07T14:14:01,610 (colQ[i].get_read_id() != -1)) { 2021-12-07T14:14:01,611 ~~~~~~~~~~~~~~~~~~~~~~^~~~~ 2021-12-07T14:14:01,613 whatshap/../src/hapchat/hapchatcore.cpp: In member function ‘void HapChatCore::represent_column(const Column&, BitColumn&, Counter&, BitColumn&, Counter&)’: 2021-12-07T14:14:01,613 whatshap/../src/hapchat/hapchatcore.cpp:1159:58: warning: comparison of integer expressions of different signedness: ‘unsigned int’ and ‘int’ [-Wsign-compare] 2021-12-07T14:14:01,613 while(cov < column.size() && column[cov].get_read_id() != -1) { 2021-12-07T14:14:01,614 ~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~ 2021-12-07T14:14:01,621 whatshap/../src/hapchat/hapchatcore.cpp: In member function ‘int HapChatCore::compute_active_common(const Column&, const Column&, unsigned int&)’: 2021-12-07T14:14:01,622 whatshap/../src/hapchat/hapchatcore.cpp:1294:33: warning: comparison of integer expressions of different signedness: ‘unsigned int’ and ‘int’ [-Wsign-compare] 2021-12-07T14:14:01,622 (colJ[j].get_read_id() != -1) && 2021-12-07T14:14:01,623 ~~~~~~~~~~~~~~~~~~~~~~^~~~~ 2021-12-07T14:14:01,623 whatshap/../src/hapchat/hapchatcore.cpp:1295:33: warning: comparison of integer expressions of different signedness: ‘unsigned int’ and ‘int’ [-Wsign-compare] 2021-12-07T14:14:01,623 (colQ[i].get_read_id() != -1)) { 2021-12-07T14:14:01,624 ~~~~~~~~~~~~~~~~~~~~~~^~~~~ 2021-12-07T14:14:01,627 whatshap/../src/hapchat/hapchatcore.cpp: In member function ‘void HapChatCore::insert_col_and_update(std::vector >&, std::vector&, std::vector&, std::vector&, const Pointer&, const Column&, std::vector&, const Counter&)’: 2021-12-07T14:14:01,628 whatshap/../src/hapchat/hapchatcore.cpp:1350:67: warning: comparison of integer expressions of different signedness: ‘unsigned int’ and ‘int’ [-Wsign-compare] 2021-12-07T14:14:01,628 if(i < input[pointer].size() && input[pointer][i].get_read_id() != -1) 2021-12-07T14:14:01,629 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~ 2021-12-07T14:14:01,782 In file included from whatshap/../src/polyphase/clustereditingsolution.h:4, 2021-12-07T14:14:01,783 from whatshap/../src/polyphase/clustereditingsolver.h:10, 2021-12-07T14:14:01,783 from whatshap/core.cpp:784: 2021-12-07T14:14:01,784 whatshap/../src/polyphase/staticsparsegraph.h: In member function ‘std::__cxx11::string StaticSparseGraph::int2bin(uint64_t)’: 2021-12-07T14:14:01,784 whatshap/../src/polyphase/staticsparsegraph.h:225:33: warning: left shift count >= width of type [-Wshift-count-overflow] 2021-12-07T14:14:01,784 uint64_t mask = (1UL << 63); // fill in values right-to-left 2021-12-07T14:14:01,785 ^~ 2021-12-07T14:14:01,863 In file included from whatshap/core.cpp:788: 2021-12-07T14:14:01,863 whatshap/../src/polyphase/haplothreader.h: At global scope: 2021-12-07T14:14:01,863 whatshap/../src/polyphase/haplothreader.h:30:53: warning: left shift count >= width of type [-Wshift-count-overflow] 2021-12-07T14:14:01,864 31UL << 20, 31UL << 25, 31UL << 30, 31UL << 35, 2021-12-07T14:14:01,864 ^~ 2021-12-07T14:14:01,864 whatshap/../src/polyphase/haplothreader.h:31:17: warning: left shift count >= width of type [-Wshift-count-overflow] 2021-12-07T14:14:01,865 31UL << 40, 31UL << 45, 31UL << 50, 31UL << 55}; 2021-12-07T14:14:01,865 ^~ 2021-12-07T14:14:01,866 whatshap/../src/polyphase/haplothreader.h:31:29: warning: left shift count >= width of type [-Wshift-count-overflow] 2021-12-07T14:14:01,866 31UL << 40, 31UL << 45, 31UL << 50, 31UL << 55}; 2021-12-07T14:14:01,866 ^~ 2021-12-07T14:14:01,866 whatshap/../src/polyphase/haplothreader.h:31:41: warning: left shift count >= width of type [-Wshift-count-overflow] 2021-12-07T14:14:01,867 31UL << 40, 31UL << 45, 31UL << 50, 31UL << 55}; 2021-12-07T14:14:01,867 ^~ 2021-12-07T14:14:01,867 whatshap/../src/polyphase/haplothreader.h:31:53: warning: left shift count >= width of type [-Wshift-count-overflow] 2021-12-07T14:14:01,868 31UL << 40, 31UL << 45, 31UL << 50, 31UL << 55}; 2021-12-07T14:14:01,868 ^~ 2021-12-07T14:14:01,868 whatshap/../src/polyphase/haplothreader.h:30:50: error: right operand of shift expression ‘(31 << 35)’ is >= than the precision of the left operand [-fpermissive] 2021-12-07T14:14:01,869 31UL << 20, 31UL << 25, 31UL << 30, 31UL << 35, 2021-12-07T14:14:01,869 ~~~~~^~~~~ 2021-12-07T14:14:01,900 In file included from whatshap/core.cpp:789: 2021-12-07T14:14:01,900 whatshap/../src/polyphase/switchflipcalculator.h:30:17: warning: left shift count >= width of type [-Wshift-count-overflow] 2021-12-07T14:14:01,901 15UL << 32, 15UL << 36, 15UL << 40, 15UL << 44, 2021-12-07T14:14:01,901 ^~ 2021-12-07T14:14:01,901 whatshap/../src/polyphase/switchflipcalculator.h:30:29: warning: left shift count >= width of type [-Wshift-count-overflow] 2021-12-07T14:14:01,902 15UL << 32, 15UL << 36, 15UL << 40, 15UL << 44, 2021-12-07T14:14:01,902 ^~ 2021-12-07T14:14:01,902 whatshap/../src/polyphase/switchflipcalculator.h:30:41: warning: left shift count >= width of type [-Wshift-count-overflow] 2021-12-07T14:14:01,903 15UL << 32, 15UL << 36, 15UL << 40, 15UL << 44, 2021-12-07T14:14:01,903 ^~ 2021-12-07T14:14:01,903 whatshap/../src/polyphase/switchflipcalculator.h:30:53: warning: left shift count >= width of type [-Wshift-count-overflow] 2021-12-07T14:14:01,904 15UL << 32, 15UL << 36, 15UL << 40, 15UL << 44, 2021-12-07T14:14:01,904 ^~ 2021-12-07T14:14:01,904 whatshap/../src/polyphase/switchflipcalculator.h:31:17: warning: left shift count >= width of type [-Wshift-count-overflow] 2021-12-07T14:14:01,905 15UL << 48, 15UL << 52, 15UL << 56, 15UL << 60 2021-12-07T14:14:01,905 ^~ 2021-12-07T14:14:01,905 whatshap/../src/polyphase/switchflipcalculator.h:31:29: warning: left shift count >= width of type [-Wshift-count-overflow] 2021-12-07T14:14:01,906 15UL << 48, 15UL << 52, 15UL << 56, 15UL << 60 2021-12-07T14:14:01,906 ^~ 2021-12-07T14:14:01,906 whatshap/../src/polyphase/switchflipcalculator.h:31:41: warning: left shift count >= width of type [-Wshift-count-overflow] 2021-12-07T14:14:01,906 15UL << 48, 15UL << 52, 15UL << 56, 15UL << 60 2021-12-07T14:14:01,907 ^~ 2021-12-07T14:14:01,907 whatshap/../src/polyphase/switchflipcalculator.h:31:53: warning: left shift count >= width of type [-Wshift-count-overflow] 2021-12-07T14:14:01,907 15UL << 48, 15UL << 52, 15UL << 56, 15UL << 60 2021-12-07T14:14:01,908 ^~ 2021-12-07T14:14:01,908 whatshap/../src/polyphase/switchflipcalculator.h:30:14: error: right operand of shift expression ‘(15 << 32)’ is >= than the precision of the left operand [-fpermissive] 2021-12-07T14:14:01,908 15UL << 32, 15UL << 36, 15UL << 40, 15UL << 44, 2021-12-07T14:14:01,909 ~~~~~^~~~~ 2021-12-07T14:14:02,555 whatshap/core.cpp: In function ‘PyObject* __pyx_pf_8whatshap_4core_15PedigreeDPTable_4get_super_reads(__pyx_obj_8whatshap_4core_PedigreeDPTable*)’: 2021-12-07T14:14:02,556 whatshap/core.cpp:9459:33: warning: comparison of integer expressions of different signedness: ‘std::vector::size_type’ {aka ‘unsigned int’} and ‘Py_ssize_t’ {aka ‘int’} [-Wsign-compare] 2021-12-07T14:14:02,556 for (__pyx_t_5 = 0; __pyx_t_5 < __pyx_t_4; __pyx_t_5+=1) { 2021-12-07T14:14:02,556 ~~~~~~~~~~^~~~~~~~~~~ 2021-12-07T14:14:03,036 whatshap/core.cpp: In function ‘PyObject* __pyx_pf_8whatshap_4core_11HapChatCore_6get_super_reads(__pyx_obj_8whatshap_4core_HapChatCore*)’: 2021-12-07T14:14:03,037 whatshap/core.cpp:15693:33: warning: comparison of integer expressions of different signedness: ‘std::vector::size_type’ {aka ‘unsigned int’} and ‘int’ [-Wsign-compare] 2021-12-07T14:14:03,037 for (__pyx_t_4 = 0; __pyx_t_4 < __pyx_t_3; __pyx_t_4+=1) { 2021-12-07T14:14:03,037 ~~~~~~~~~~^~~~~~~~~~~ 2021-12-07T14:14:03,891 whatshap/core.cpp: In function ‘PyObject* __pyx_pf_8whatshap_4core_20SwitchFlipCalculator_2compute_switch_flips_poly(__pyx_obj_8whatshap_4core_SwitchFlipCalculator*, PyObject*, PyObject*)’: 2021-12-07T14:14:03,891 whatshap/core.cpp:23910:30: warning: comparison of integer expressions of different signedness: ‘Py_ssize_t’ {aka ‘int’} and ‘uint32_t’ {aka ‘unsigned int’} [-Wsign-compare] 2021-12-07T14:14:03,892 __pyx_t_3 = (__pyx_t_2 == __pyx_v_self->ploidy); 2021-12-07T14:14:03,892 ~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~ 2021-12-07T14:14:03,920 whatshap/core.cpp:24127:39: warning: comparison of integer expressions of different signedness: ‘Py_ssize_t’ {aka ‘int’} and ‘std::vector::size_type’ {aka ‘unsigned int’} [-Wsign-compare] 2021-12-07T14:14:03,920 __pyx_t_15 = ((__pyx_v_num_vars == __pyx_v_switches_in_column.size()) != 0); 2021-12-07T14:14:03,921 ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 2021-12-07T14:14:03,921 whatshap/core.cpp:24152:39: warning: comparison of integer expressions of different signedness: ‘Py_ssize_t’ {aka ‘int’} and ‘std::vector >::size_type’ {aka ‘unsigned int’} [-Wsign-compare] 2021-12-07T14:14:03,921 __pyx_t_15 = ((__pyx_v_num_vars == __pyx_v_flips_in_column.size()) != 0); 2021-12-07T14:14:03,922 ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 2021-12-07T14:14:03,922 whatshap/core.cpp:24177:39: warning: comparison of integer expressions of different signedness: ‘Py_ssize_t’ {aka ‘int’} and ‘std::vector >::size_type’ {aka ‘unsigned int’} [-Wsign-compare] 2021-12-07T14:14:03,922 __pyx_t_15 = ((__pyx_v_num_vars == __pyx_v_perm_in_column.size()) != 0); 2021-12-07T14:14:03,923 ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 2021-12-07T14:14:03,930 whatshap/core.cpp:24335:39: warning: comparison of integer expressions of different signedness: ‘Py_ssize_t’ {aka ‘int’} and ‘uint32_t’ {aka ‘unsigned int’} [-Wsign-compare] 2021-12-07T14:14:03,931 for (__pyx_t_17 = 0; __pyx_t_17 < __pyx_t_8; __pyx_t_17+=1) { 2021-12-07T14:14:03,931 ~~~~~~~~~~~^~~~~~~~~~~ 2021-12-07T14:14:08,834 error: command 'arm-linux-gnueabihf-gcc' failed with exit status 1 2021-12-07T14:14:09,022 Building wheel for whatshap (pyproject.toml): finished with status 'error' 2021-12-07T14:14:09,026 ERROR: Failed building wheel for whatshap 2021-12-07T14:14:09,030 Failed to build whatshap 2021-12-07T14:14:09,031 ERROR: Failed to build one or more wheels 2021-12-07T14:14:09,033 Exception information: 2021-12-07T14:14:09,033 Traceback (most recent call last): 2021-12-07T14:14:09,033 File "/usr/local/lib/python3.7/dist-packages/pip/_internal/cli/base_command.py", line 164, in exc_logging_wrapper 2021-12-07T14:14:09,033 status = run_func(*args) 2021-12-07T14:14:09,033 File "/usr/local/lib/python3.7/dist-packages/pip/_internal/cli/req_command.py", line 205, in wrapper 2021-12-07T14:14:09,033 return func(self, options, args) 2021-12-07T14:14:09,033 File "/usr/local/lib/python3.7/dist-packages/pip/_internal/commands/wheel.py", line 175, in run 2021-12-07T14:14:09,033 raise CommandError("Failed to build one or more wheels") 2021-12-07T14:14:09,033 pip._internal.exceptions.CommandError: Failed to build one or more wheels 2021-12-07T14:14:09,043 Removed build tracker: '/tmp/pip-req-tracker-_9auf1g2'