2021-12-13T23:22:06,137 Created temporary directory: /tmp/pip-ephem-wheel-cache-nz0u3jk2
2021-12-13T23:22:06,144 Created temporary directory: /tmp/pip-req-tracker-wuqeuxar
2021-12-13T23:22:06,145 Initialized build tracking at /tmp/pip-req-tracker-wuqeuxar
2021-12-13T23:22:06,145 Created build tracker: /tmp/pip-req-tracker-wuqeuxar
2021-12-13T23:22:06,146 Entered build tracker: /tmp/pip-req-tracker-wuqeuxar
2021-12-13T23:22:06,147 Created temporary directory: /tmp/pip-wheel-z4zo3nzi
2021-12-13T23:22:06,213 Looking in indexes: https://pypi.org/simple, https://www.piwheels.org/simple
2021-12-13T23:22:06,217 2 location(s) to search for versions of kage-genotyper:
2021-12-13T23:22:06,217 * https://pypi.org/simple/kage-genotyper/
2021-12-13T23:22:06,217 * https://www.piwheels.org/simple/kage-genotyper/
2021-12-13T23:22:06,217 Fetching project page and analyzing links: https://pypi.org/simple/kage-genotyper/
2021-12-13T23:22:06,220 Getting page https://pypi.org/simple/kage-genotyper/
2021-12-13T23:22:06,224 Found index url https://pypi.org/simple
2021-12-13T23:22:06,586   Found link https://files.pythonhosted.org/packages/e7/66/016860668992a70bab9c872c5032fbc34e2f9ecc6936b95b4e9a0b0c812b/kage-genotyper-0.0.2.tar.gz#sha256=54ba5a094a15547344c88bd7063e22c9d932bbf7eacfbc8588a83d8b9b42dfc1 (from https://pypi.org/simple/kage-genotyper/), version: 0.0.2
2021-12-13T23:22:06,588   Found link https://files.pythonhosted.org/packages/80/ee/e08c95ccb0c401cfb2049e7271acdcb455196900f035e0700f6229d6c25d/kage-genotyper-0.0.3.tar.gz#sha256=727bf1ff9880dea8e8fe1a2aa5da4d0797fd5f64d75eda6a1ec53be5caa7d9f3 (from https://pypi.org/simple/kage-genotyper/), version: 0.0.3
2021-12-13T23:22:06,589   Found link https://files.pythonhosted.org/packages/47/5d/a155072db4e4e73f1a7b0f115f4641172458ef39411234990de2601e453a/kage-genotyper-0.0.4.tar.gz#sha256=d4316597d56b72c41623b03f06ed0fcacdfe0e301ad49d49fadcfd41e1f881f6 (from https://pypi.org/simple/kage-genotyper/), version: 0.0.4
2021-12-13T23:22:06,589   Found link https://files.pythonhosted.org/packages/9d/e0/92cb3c9de8704e94d12b1d13eee089389ba0b8cdeb5f7606e82357615039/kage-genotyper-0.0.5.tar.gz#sha256=78c0fdef5e5cf0ee401e5188dece6e297c3e20c3d72aa355c86426149d31819f (from https://pypi.org/simple/kage-genotyper/), version: 0.0.5
2021-12-13T23:22:06,590   Found link https://files.pythonhosted.org/packages/98/56/5a01b760b477d84f2e0d4284563b1a49d4c7af720ce16d8fe35273e43659/kage-genotyper-0.0.6.tar.gz#sha256=ddc00d681b1ff98043bf087216c44681f6dc8dbfad4d327a2775f3eec6937fae (from https://pypi.org/simple/kage-genotyper/), version: 0.0.6
2021-12-13T23:22:06,591   Found link https://files.pythonhosted.org/packages/62/2f/3fff47b02ebb52b577de8ff09e20d158d6796d577ab450cdee96f698915c/kage-genotyper-0.0.7.tar.gz#sha256=0a9471a1138b797df060c5aa9e7a8761e6282c5b0361432c8dcfbd168cbc15ce (from https://pypi.org/simple/kage-genotyper/), version: 0.0.7
2021-12-13T23:22:06,592   Found link https://files.pythonhosted.org/packages/52/b9/4e0cdf90c6fdee475a81d9eb47e8313937d68047a26314a6f4106b1f2f1d/kage-genotyper-0.0.8.tar.gz#sha256=11f2cd7f4adb9bb782dfaa359e8262b8f9616efc326e6d78f3608deabc81b0ea (from https://pypi.org/simple/kage-genotyper/), version: 0.0.8
2021-12-13T23:22:06,593   Found link https://files.pythonhosted.org/packages/37/a0/b87d59cc79cc5ecdd5517141b7c9e29953bfea3e9272b99840e1cd9b3d97/kage-genotyper-0.0.9.tar.gz#sha256=062ad455d207590ac2c60f823dd2868cdb52324dc4d06e960cd314b3a114b6d3 (from https://pypi.org/simple/kage-genotyper/), version: 0.0.9
2021-12-13T23:22:06,594   Found link https://files.pythonhosted.org/packages/a3/cc/ba453ad8b8cb30ad50f71f35eb171b5fd2419999465ec9ae2572fc1816bb/kage-genotyper-0.0.10.tar.gz#sha256=267e5ed35e9f10ff41b40e710c2d4becc564d6e2922048c1d3892f3b1a5c1780 (from https://pypi.org/simple/kage-genotyper/), version: 0.0.10
2021-12-13T23:22:06,595   Found link https://files.pythonhosted.org/packages/6a/54/8aba286e135663aade36ea3d9a597062aee31798db5622527b438994c2c2/kage-genotyper-0.0.12.tar.gz#sha256=05a080b9cd4f9250b5d7b0cffc7189491a019c8bc454499ef0b4cd6fe0de58f7 (from https://pypi.org/simple/kage-genotyper/), version: 0.0.12
2021-12-13T23:22:06,596   Found link https://files.pythonhosted.org/packages/17/30/f3311d5d12dd04c079c18f0003d3d2d71b5948ee3cd18a74c29890b64a1a/kage-genotyper-0.0.13.tar.gz#sha256=773d6150af358c965da32ae381fbbc05d0ff7183f3a2c74bd1b5d1eb2093375f (from https://pypi.org/simple/kage-genotyper/), version: 0.0.13
2021-12-13T23:22:06,596 Fetching project page and analyzing links: https://www.piwheels.org/simple/kage-genotyper/
2021-12-13T23:22:06,597 Getting page https://www.piwheels.org/simple/kage-genotyper/
2021-12-13T23:22:06,600 Found index url https://www.piwheels.org/simple
2021-12-13T23:22:06,830   Skipping link: No binaries permitted for kage-genotyper: https://www.piwheels.org/simple/kage-genotyper/kage_genotyper-0.0.10-py3-none-any.whl#sha256=f0de4fec6f21e6c0e0fe926b55af6a9032fb8af3ff0ac0a4e462c49fa9fefaf5 (from https://www.piwheels.org/simple/kage-genotyper/)
2021-12-13T23:22:06,831   Skipping link: No binaries permitted for kage-genotyper: https://www.piwheels.org/simple/kage-genotyper/kage_genotyper-0.0.12-py3-none-any.whl#sha256=7d3956620409c7b4f5acbfb7ba2f2c5b1ac4fa3761bc803d9500f4e627943de5 (from https://www.piwheels.org/simple/kage-genotyper/)
2021-12-13T23:22:06,832   Skipping link: No binaries permitted for kage-genotyper: https://www.piwheels.org/simple/kage-genotyper/kage_genotyper-0.0.3-py3-none-any.whl#sha256=7d52b7bdc251d8fa41b2627126137f9c9d6b34e76dcc9d8c85de8d0d42f6bf33 (from https://www.piwheels.org/simple/kage-genotyper/)
2021-12-13T23:22:06,832   Skipping link: No binaries permitted for kage-genotyper: https://www.piwheels.org/simple/kage-genotyper/kage_genotyper-0.0.4-py3-none-any.whl#sha256=a279c71d67ea133f1cf0818eb5c559c97e5f2460cc45aba044dd17abf30d6446 (from https://www.piwheels.org/simple/kage-genotyper/)
2021-12-13T23:22:06,833   Skipping link: No binaries permitted for kage-genotyper: https://www.piwheels.org/simple/kage-genotyper/kage_genotyper-0.0.5-py3-none-any.whl#sha256=dbca21ae8964d1bf38306442e517c6b17b688a29519f7675082be82135c4c98f (from https://www.piwheels.org/simple/kage-genotyper/)
2021-12-13T23:22:06,833   Skipping link: No binaries permitted for kage-genotyper: https://www.piwheels.org/simple/kage-genotyper/kage_genotyper-0.0.6-py3-none-any.whl#sha256=7f26289022b49cd9611615aa9f542bea798b0827f5df45e23c5d65148fb2f169 (from https://www.piwheels.org/simple/kage-genotyper/)
2021-12-13T23:22:06,834   Skipping link: No binaries permitted for kage-genotyper: https://www.piwheels.org/simple/kage-genotyper/kage_genotyper-0.0.7-py3-none-any.whl#sha256=6c45550e73562e3543e4dedf63f5e42897169f62a701603f2c4a460ac1e0b5fa (from https://www.piwheels.org/simple/kage-genotyper/)
2021-12-13T23:22:06,835   Skipping link: No binaries permitted for kage-genotyper: https://www.piwheels.org/simple/kage-genotyper/kage_genotyper-0.0.8-py3-none-any.whl#sha256=17c38eb9469806ae1d16028b61450a754b7a2e9607b63cf4cb2c1bc4cd19f562 (from https://www.piwheels.org/simple/kage-genotyper/)
2021-12-13T23:22:06,835   Skipping link: No binaries permitted for kage-genotyper: https://www.piwheels.org/simple/kage-genotyper/kage_genotyper-0.0.9-py3-none-any.whl#sha256=6728e2c34e7473f450ba0dc3b680189ec324937e583ce456df04d4352047531b (from https://www.piwheels.org/simple/kage-genotyper/)
2021-12-13T23:22:06,868 Given no hashes to check 1 links for project 'kage-genotyper': discarding no candidates
2021-12-13T23:22:06,900 Collecting kage-genotyper==0.0.13
2021-12-13T23:22:06,904   Created temporary directory: /tmp/pip-unpack-mjm2qz2j
2021-12-13T23:22:07,124   Downloading kage-genotyper-0.0.13.tar.gz (30 kB)
2021-12-13T23:22:07,339   Added kage-genotyper==0.0.13 from https://files.pythonhosted.org/packages/17/30/f3311d5d12dd04c079c18f0003d3d2d71b5948ee3cd18a74c29890b64a1a/kage-genotyper-0.0.13.tar.gz#sha256=773d6150af358c965da32ae381fbbc05d0ff7183f3a2c74bd1b5d1eb2093375f to build tracker '/tmp/pip-req-tracker-wuqeuxar'
2021-12-13T23:22:07,341     Running setup.py (path:/tmp/pip-wheel-z4zo3nzi/kage-genotyper_827231fde0624738a5e7762b4ae59e4a/setup.py) egg_info for package kage-genotyper
2021-12-13T23:22:07,343     Created temporary directory: /tmp/pip-pip-egg-info-a126c589
2021-12-13T23:22:07,344     Running command python setup.py egg_info
2021-12-13T23:22:09,329     running egg_info
2021-12-13T23:22:09,335     creating /tmp/pip-pip-egg-info-a126c589/kage_genotyper.egg-info
2021-12-13T23:22:09,339     writing top-level names to /tmp/pip-pip-egg-info-a126c589/kage_genotyper.egg-info/top_level.txt
2021-12-13T23:22:09,341     writing /tmp/pip-pip-egg-info-a126c589/kage_genotyper.egg-info/PKG-INFO
2021-12-13T23:22:09,347     writing requirements to /tmp/pip-pip-egg-info-a126c589/kage_genotyper.egg-info/requires.txt
2021-12-13T23:22:09,349     writing dependency_links to /tmp/pip-pip-egg-info-a126c589/kage_genotyper.egg-info/dependency_links.txt
2021-12-13T23:22:09,351     writing entry points to /tmp/pip-pip-egg-info-a126c589/kage_genotyper.egg-info/entry_points.txt
2021-12-13T23:22:09,355     writing manifest file '/tmp/pip-pip-egg-info-a126c589/kage_genotyper.egg-info/SOURCES.txt'
2021-12-13T23:22:09,719     reading manifest file '/tmp/pip-pip-egg-info-a126c589/kage_genotyper.egg-info/SOURCES.txt'
2021-12-13T23:22:09,728     writing manifest file '/tmp/pip-pip-egg-info-a126c589/kage_genotyper.egg-info/SOURCES.txt'
2021-12-13T23:22:09,862   Source in /tmp/pip-wheel-z4zo3nzi/kage-genotyper_827231fde0624738a5e7762b4ae59e4a has version 0.0.13, which satisfies requirement kage-genotyper==0.0.13 from https://files.pythonhosted.org/packages/17/30/f3311d5d12dd04c079c18f0003d3d2d71b5948ee3cd18a74c29890b64a1a/kage-genotyper-0.0.13.tar.gz#sha256=773d6150af358c965da32ae381fbbc05d0ff7183f3a2c74bd1b5d1eb2093375f
2021-12-13T23:22:09,864   Removed kage-genotyper==0.0.13 from https://files.pythonhosted.org/packages/17/30/f3311d5d12dd04c079c18f0003d3d2d71b5948ee3cd18a74c29890b64a1a/kage-genotyper-0.0.13.tar.gz#sha256=773d6150af358c965da32ae381fbbc05d0ff7183f3a2c74bd1b5d1eb2093375f from build tracker '/tmp/pip-req-tracker-wuqeuxar'
2021-12-13T23:22:09,872 Created temporary directory: /tmp/pip-unpack-cx6cmovj
2021-12-13T23:22:09,873 Building wheels for collected packages: kage-genotyper
2021-12-13T23:22:09,882   Created temporary directory: /tmp/pip-wheel-wj39zorm
2021-12-13T23:22:09,883   Building wheel for kage-genotyper (setup.py): started
2021-12-13T23:22:09,884   Destination directory: /tmp/pip-wheel-wj39zorm
2021-12-13T23:22:09,884   Running command /usr/bin/python3 -u -c 'import sys, setuptools, tokenize; sys.argv[0] = '"'"'/tmp/pip-wheel-z4zo3nzi/kage-genotyper_827231fde0624738a5e7762b4ae59e4a/setup.py'"'"'; __file__='"'"'/tmp/pip-wheel-z4zo3nzi/kage-genotyper_827231fde0624738a5e7762b4ae59e4a/setup.py'"'"';f=getattr(tokenize, '"'"'open'"'"', open)(__file__);code=f.read().replace('"'"'\r\n'"'"', '"'"'\n'"'"');f.close();exec(compile(code, __file__, '"'"'exec'"'"'))' bdist_wheel -d /tmp/pip-wheel-wj39zorm
2021-12-13T23:22:11,860   running bdist_wheel
2021-12-13T23:22:11,874   running build
2021-12-13T23:22:11,875   running build_py
2021-12-13T23:22:12,215   creating build
2021-12-13T23:22:12,216   creating build/lib
2021-12-13T23:22:12,218   creating build/lib/kage
2021-12-13T23:22:12,220   copying kage/genotyper.py -> build/lib/kage
2021-12-13T23:22:12,226   copying kage/tricky_variants.py -> build/lib/kage
2021-12-13T23:22:12,230   copying kage/numpy_genotyper.py -> build/lib/kage
2021-12-13T23:22:12,236   copying kage/util.py -> build/lib/kage
2021-12-13T23:22:12,241   copying kage/combination_model_genotyper.py -> build/lib/kage
2021-12-13T23:22:12,247   copying kage/reads.py -> build/lib/kage
2021-12-13T23:22:12,253   copying kage/reference_kmers.py -> build/lib/kage
2021-12-13T23:22:12,258   copying kage/helper_index.py -> build/lib/kage
2021-12-13T23:22:12,262   copying kage/node_counts.py -> build/lib/kage
2021-12-13T23:22:12,266   copying kage/combomodel.py -> build/lib/kage
2021-12-13T23:22:12,271   copying kage/node_count_model.py -> build/lib/kage
2021-12-13T23:22:12,276   copying kage/models.py -> build/lib/kage
2021-12-13T23:22:12,281   copying kage/__init__.py -> build/lib/kage
2021-12-13T23:22:12,287   copying kage/helper_index_using_duplicate_counts.py -> build/lib/kage
2021-12-13T23:22:12,292   copying kage/negative_binomial_model.py -> build/lib/kage
2021-12-13T23:22:12,298   copying kage/variant_kmer_analyser.py -> build/lib/kage
2021-12-13T23:22:12,302   copying kage/joint_distribution.py -> build/lib/kage
2021-12-13T23:22:12,306   copying kage/command_line_interface.py -> build/lib/kage
2021-12-13T23:22:12,313   copying kage/analysis.py -> build/lib/kage
2021-12-13T23:22:12,320   copying kage/simulation.py -> build/lib/kage
2021-12-13T23:22:12,327   copying kage/variant_filtering.py -> build/lib/kage
2021-12-13T23:22:12,345   installing to build/bdist.linux-armv7l/wheel
2021-12-13T23:22:12,346   running install
2021-12-13T23:22:12,348   running install_lib
2021-12-13T23:22:12,355   creating build/bdist.linux-armv7l
2021-12-13T23:22:12,356   creating build/bdist.linux-armv7l/wheel
2021-12-13T23:22:12,360   creating build/bdist.linux-armv7l/wheel/kage
2021-12-13T23:22:12,362   copying build/lib/kage/genotyper.py -> build/bdist.linux-armv7l/wheel/kage
2021-12-13T23:22:12,369   copying build/lib/kage/tricky_variants.py -> build/bdist.linux-armv7l/wheel/kage
2021-12-13T23:22:12,372   copying build/lib/kage/numpy_genotyper.py -> build/bdist.linux-armv7l/wheel/kage
2021-12-13T23:22:12,379   copying build/lib/kage/util.py -> build/bdist.linux-armv7l/wheel/kage
2021-12-13T23:22:12,383   copying build/lib/kage/combination_model_genotyper.py -> build/bdist.linux-armv7l/wheel/kage
2021-12-13T23:22:12,390   copying build/lib/kage/reads.py -> build/bdist.linux-armv7l/wheel/kage
2021-12-13T23:22:12,396   copying build/lib/kage/reference_kmers.py -> build/bdist.linux-armv7l/wheel/kage
2021-12-13T23:22:12,402   copying build/lib/kage/helper_index.py -> build/bdist.linux-armv7l/wheel/kage
2021-12-13T23:22:12,408   copying build/lib/kage/node_counts.py -> build/bdist.linux-armv7l/wheel/kage
2021-12-13T23:22:12,413   copying build/lib/kage/combomodel.py -> build/bdist.linux-armv7l/wheel/kage
2021-12-13T23:22:12,420   copying build/lib/kage/node_count_model.py -> build/bdist.linux-armv7l/wheel/kage
2021-12-13T23:22:12,427   copying build/lib/kage/models.py -> build/bdist.linux-armv7l/wheel/kage
2021-12-13T23:22:12,433   copying build/lib/kage/__init__.py -> build/bdist.linux-armv7l/wheel/kage
2021-12-13T23:22:12,438   copying build/lib/kage/helper_index_using_duplicate_counts.py -> build/bdist.linux-armv7l/wheel/kage
2021-12-13T23:22:12,444   copying build/lib/kage/negative_binomial_model.py -> build/bdist.linux-armv7l/wheel/kage
2021-12-13T23:22:12,450   copying build/lib/kage/variant_kmer_analyser.py -> build/bdist.linux-armv7l/wheel/kage
2021-12-13T23:22:12,455   copying build/lib/kage/joint_distribution.py -> build/bdist.linux-armv7l/wheel/kage
2021-12-13T23:22:12,460   copying build/lib/kage/command_line_interface.py -> build/bdist.linux-armv7l/wheel/kage
2021-12-13T23:22:12,470   copying build/lib/kage/analysis.py -> build/bdist.linux-armv7l/wheel/kage
2021-12-13T23:22:12,477   copying build/lib/kage/simulation.py -> build/bdist.linux-armv7l/wheel/kage
2021-12-13T23:22:12,484   copying build/lib/kage/variant_filtering.py -> build/bdist.linux-armv7l/wheel/kage
2021-12-13T23:22:12,489   running install_egg_info
2021-12-13T23:22:12,538   running egg_info
2021-12-13T23:22:12,540   writing requirements to kage_genotyper.egg-info/requires.txt
2021-12-13T23:22:12,542   writing kage_genotyper.egg-info/PKG-INFO
2021-12-13T23:22:12,546   writing dependency_links to kage_genotyper.egg-info/dependency_links.txt
2021-12-13T23:22:12,549   writing top-level names to kage_genotyper.egg-info/top_level.txt
2021-12-13T23:22:12,552   writing entry points to kage_genotyper.egg-info/entry_points.txt
2021-12-13T23:22:12,562   reading manifest file 'kage_genotyper.egg-info/SOURCES.txt'
2021-12-13T23:22:12,574   writing manifest file 'kage_genotyper.egg-info/SOURCES.txt'
2021-12-13T23:22:12,577   Copying kage_genotyper.egg-info to build/bdist.linux-armv7l/wheel/kage_genotyper-0.0.13-py3.5.egg-info
2021-12-13T23:22:12,608   running install_scripts
2021-12-13T23:22:12,822   creating build/bdist.linux-armv7l/wheel/kage_genotyper-0.0.13.dist-info/WHEEL
2021-12-13T23:22:13,113   Building wheel for kage-genotyper (setup.py): finished with status 'done'
2021-12-13T23:22:13,117   Created wheel for kage-genotyper: filename=kage_genotyper-0.0.13-py3-none-any.whl size=38458 sha256=a256a7d8c6fbb49d6029a56d01e7608d04434d6016d8851d750b3c0a946fe0d4
2021-12-13T23:22:13,118   Stored in directory: /tmp/pip-ephem-wheel-cache-nz0u3jk2/wheels/c1/b5/74/7b976aedd1f28e3bd986039d292013eb57d224cebe6d071c02
2021-12-13T23:22:13,136 Successfully built kage-genotyper
2021-12-13T23:22:13,148 Removed build tracker: '/tmp/pip-req-tracker-wuqeuxar'