2021-12-19T06:07:01,438 Created temporary directory: /tmp/pip-ephem-wheel-cache-f2577ng6
2021-12-19T06:07:01,443 Created temporary directory: /tmp/pip-req-tracker-ypi36p4i
2021-12-19T06:07:01,444 Initialized build tracking at /tmp/pip-req-tracker-ypi36p4i
2021-12-19T06:07:01,445 Created build tracker: /tmp/pip-req-tracker-ypi36p4i
2021-12-19T06:07:01,445 Entered build tracker: /tmp/pip-req-tracker-ypi36p4i
2021-12-19T06:07:01,446 Created temporary directory: /tmp/pip-wheel-sfmoiiqz
2021-12-19T06:07:01,509 Looking in indexes: https://pypi.org/simple, https://www.piwheels.org/simple
2021-12-19T06:07:01,514 2 location(s) to search for versions of fragmenstein:
2021-12-19T06:07:01,514 * https://pypi.org/simple/fragmenstein/
2021-12-19T06:07:01,514 * https://www.piwheels.org/simple/fragmenstein/
2021-12-19T06:07:01,515 Fetching project page and analyzing links: https://pypi.org/simple/fragmenstein/
2021-12-19T06:07:01,516 Getting page https://pypi.org/simple/fragmenstein/
2021-12-19T06:07:01,520 Found index url https://pypi.org/simple
2021-12-19T06:07:01,724   Found link https://files.pythonhosted.org/packages/79/ea/7241107f42ce973a3d450ec740b88e5c481b09a368f56e472a79a051a272/Fragmenstein-0.6.tar.gz#sha256=8a298c932ea1b6b55131b92b1553b9659c3b7f63a77db39b88e81051980440b6 (from https://pypi.org/simple/fragmenstein/), version: 0.6
2021-12-19T06:07:01,725   Found link https://files.pythonhosted.org/packages/a5/40/314e6be38aa08837214d20180853d6f7b1216ce5600cc08b9d2af71fddd1/fragmenstein-0.6.1.tar.gz#sha256=e97aafbe0ea51d18115dcd4107984769da0663cc0a20b53443d7f7aaac9bd701 (from https://pypi.org/simple/fragmenstein/), version: 0.6.1
2021-12-19T06:07:01,725   Found link https://files.pythonhosted.org/packages/01/5a/80ee1256cd2c279c50e75ec982d56dcd4abe9f4ac8bb4c19c37299fe8792/fragmenstein-0.6.2.tar.gz#sha256=167e96cb1182bd30a948ff6b919d05bb7f9cc04325d5d2ce842d9660fed5fb30 (from https://pypi.org/simple/fragmenstein/), version: 0.6.2
2021-12-19T06:07:01,726   Found link https://files.pythonhosted.org/packages/d0/5c/78b74cb56d283448857aab8e31dc7593ea40c278367cfddb5d8823f88af1/fragmenstein-0.6.3.tar.gz#sha256=dd8414e3152cc72855bfc85a886b41d7037002a96e2785716194cda67bad0cb6 (from https://pypi.org/simple/fragmenstein/), version: 0.6.3
2021-12-19T06:07:01,727   Found link https://files.pythonhosted.org/packages/ef/53/306ce7438a57b764d88968982f6a5dc9b4c69e83bd23a20d857040223368/Fragmenstein-0.6.4.tar.gz#sha256=f46068418a01abdca48d58e27071f2ae5bcd34f66de527e833e1040d492ca86f (from https://pypi.org/simple/fragmenstein/), version: 0.6.4
2021-12-19T06:07:01,727   Found link https://files.pythonhosted.org/packages/7a/16/dd9b834215d9b986894c991e28cb9111691401b52686f2f8d3b4503cd25e/Fragmenstein-0.6.5.tar.gz#sha256=f15566be1726c42db0bf0947a4fdb5ac60668cf78181354421289646df400b81 (from https://pypi.org/simple/fragmenstein/), version: 0.6.5
2021-12-19T06:07:01,728   Found link https://files.pythonhosted.org/packages/5c/e2/d2ca713c7a98e86580ca55c8cea3bd011aab570829eb7306bb76471f41f5/Fragmenstein-0.6.7.tar.gz#sha256=7bc5579fba97a279e6a7714de296448d12a70b1f4bf0c078318f4ee77d74c6f5 (from https://pypi.org/simple/fragmenstein/), version: 0.6.7
2021-12-19T06:07:01,729   Found link https://files.pythonhosted.org/packages/d3/de/18bb471456c5f660642b8df218f03631149c30947995eb4896b7fca4752d/Fragmenstein-0.6.8.tar.gz#sha256=485807bc0934f4d6beae6947b67c34f64a24f7a0f39a977dbc5ac7949d08fe89 (from https://pypi.org/simple/fragmenstein/), version: 0.6.8
2021-12-19T06:07:01,730 Fetching project page and analyzing links: https://www.piwheels.org/simple/fragmenstein/
2021-12-19T06:07:01,730 Getting page https://www.piwheels.org/simple/fragmenstein/
2021-12-19T06:07:01,732 Found index url https://www.piwheels.org/simple
2021-12-19T06:07:01,958   Skipping link: No binaries permitted for fragmenstein: https://www.piwheels.org/simple/fragmenstein/Fragmenstein-0.6-py3-none-any.whl#sha256=a066df758898ce62bb498e9000e9e60772360c4fba8b4c9b687e0fc1e535a5ca (from https://www.piwheels.org/simple/fragmenstein/)
2021-12-19T06:07:01,959   Skipping link: No binaries permitted for fragmenstein: https://www.piwheels.org/simple/fragmenstein/fragmenstein-0.6.1-py3-none-any.whl#sha256=0a434b2df199f1664c61f14d7307e316f5e1bd615eb3995fe740fa9b43567360 (from https://www.piwheels.org/simple/fragmenstein/)
2021-12-19T06:07:01,959   Skipping link: No binaries permitted for fragmenstein: https://www.piwheels.org/simple/fragmenstein/fragmenstein-0.6.2-py3-none-any.whl#sha256=06157e7aa034419ec24c936b586fee8801b66cd32017233c170a9e67aee89f93 (from https://www.piwheels.org/simple/fragmenstein/)
2021-12-19T06:07:01,960   Skipping link: No binaries permitted for fragmenstein: https://www.piwheels.org/simple/fragmenstein/fragmenstein-0.6.3-py3-none-any.whl#sha256=44918733ba0b1d6cd8179b2525562e84b5e8620385d5c36ad304d8ef005ddb9f (from https://www.piwheels.org/simple/fragmenstein/)
2021-12-19T06:07:01,960   Skipping link: No binaries permitted for fragmenstein: https://www.piwheels.org/simple/fragmenstein/Fragmenstein-0.6.4-py3-none-any.whl#sha256=fd2ae6f3f195d72cd1a89a6831ee0a23ab5edecc899e5cecef0663e5da21b3ed (from https://www.piwheels.org/simple/fragmenstein/)
2021-12-19T06:07:01,961   Skipping link: No binaries permitted for fragmenstein: https://www.piwheels.org/simple/fragmenstein/Fragmenstein-0.6.5-py3-none-any.whl#sha256=dc7956be0681793a1b114b9314d939e844ceefbe73c947332ed41160f87f4fb7 (from https://www.piwheels.org/simple/fragmenstein/)
2021-12-19T06:07:01,961 Skipping link: not a file: https://www.piwheels.org/simple/fragmenstein/
2021-12-19T06:07:01,962 Skipping link: not a file: https://pypi.org/simple/fragmenstein/
2021-12-19T06:07:01,996 Given no hashes to check 1 links for project 'fragmenstein': discarding no candidates
2021-12-19T06:07:02,026 Collecting fragmenstein==0.6.7
2021-12-19T06:07:02,029   Created temporary directory: /tmp/pip-unpack-wl87upcx
2021-12-19T06:07:02,114   Downloading Fragmenstein-0.6.7.tar.gz (83 kB)
2021-12-19T06:07:02,354   Added fragmenstein==0.6.7 from https://files.pythonhosted.org/packages/5c/e2/d2ca713c7a98e86580ca55c8cea3bd011aab570829eb7306bb76471f41f5/Fragmenstein-0.6.7.tar.gz#sha256=7bc5579fba97a279e6a7714de296448d12a70b1f4bf0c078318f4ee77d74c6f5 to build tracker '/tmp/pip-req-tracker-ypi36p4i'
2021-12-19T06:07:02,355   Running setup.py (path:/tmp/pip-wheel-sfmoiiqz/fragmenstein_9ae59d6d82ca4b5080f6bc79fdc44b72/setup.py) egg_info for package fragmenstein
2021-12-19T06:07:02,356   Created temporary directory: /tmp/pip-pip-egg-info-diij2tcz
2021-12-19T06:07:02,357   Preparing metadata (setup.py): started
2021-12-19T06:07:02,358   Running command python setup.py egg_info
2021-12-19T06:07:04,072   running egg_info
2021-12-19T06:07:04,076   creating /tmp/pip-pip-egg-info-diij2tcz/Fragmenstein.egg-info
2021-12-19T06:07:04,077   writing /tmp/pip-pip-egg-info-diij2tcz/Fragmenstein.egg-info/PKG-INFO
2021-12-19T06:07:04,081   writing dependency_links to /tmp/pip-pip-egg-info-diij2tcz/Fragmenstein.egg-info/dependency_links.txt
2021-12-19T06:07:04,084   writing entry points to /tmp/pip-pip-egg-info-diij2tcz/Fragmenstein.egg-info/entry_points.txt
2021-12-19T06:07:04,086   writing requirements to /tmp/pip-pip-egg-info-diij2tcz/Fragmenstein.egg-info/requires.txt
2021-12-19T06:07:04,088   writing top-level names to /tmp/pip-pip-egg-info-diij2tcz/Fragmenstein.egg-info/top_level.txt
2021-12-19T06:07:04,091   writing manifest file '/tmp/pip-pip-egg-info-diij2tcz/Fragmenstein.egg-info/SOURCES.txt'
2021-12-19T06:07:04,117   reading manifest file '/tmp/pip-pip-egg-info-diij2tcz/Fragmenstein.egg-info/SOURCES.txt'
2021-12-19T06:07:04,127   writing manifest file '/tmp/pip-pip-egg-info-diij2tcz/Fragmenstein.egg-info/SOURCES.txt'
2021-12-19T06:07:04,129   /tmp/pip-wheel-sfmoiiqz/fragmenstein_9ae59d6d82ca4b5080f6bc79fdc44b72/setup.py:16: UserWarning: This 3.6+ script **requires** rdkit which ~cannot~ [could not] be pip installed. To install try either pip install rdkit-pypiconda install -c conda-forge rdkit or sudo apt-get/brew install python3-rdkit or visit rdkit documentation.
2021-12-19T06:07:04,129     'conda install -c conda-forge rdkit or ' +
2021-12-19T06:07:04,130   /tmp/pip-wheel-sfmoiiqz/fragmenstein_9ae59d6d82ca4b5080f6bc79fdc44b72/setup.py:20: UserWarning: The minimisation part of this code uses pyrosetta, which has to be downloaded from the Rosetta software site due to licencing. Without it only the classes Monster and Rectifier will work
2021-12-19T06:07:04,130     warn('The minimisation part of this code uses pyrosetta, which has to be downloaded from ' +
2021-12-19T06:07:04,131   /tmp/pip-wheel-sfmoiiqz/fragmenstein_9ae59d6d82ca4b5080f6bc79fdc44b72/setup.py:24: UserWarning: The module pymol2 is optionally required (conda or apt-get installable).
2021-12-19T06:07:04,131     warn('The module pymol2 is optionally required (conda or apt-get installable).')
2021-12-19T06:07:04,230   Preparing metadata (setup.py): finished with status 'done'
2021-12-19T06:07:04,238   Source in /tmp/pip-wheel-sfmoiiqz/fragmenstein_9ae59d6d82ca4b5080f6bc79fdc44b72 has version 0.6.7, which satisfies requirement fragmenstein==0.6.7 from https://files.pythonhosted.org/packages/5c/e2/d2ca713c7a98e86580ca55c8cea3bd011aab570829eb7306bb76471f41f5/Fragmenstein-0.6.7.tar.gz#sha256=7bc5579fba97a279e6a7714de296448d12a70b1f4bf0c078318f4ee77d74c6f5
2021-12-19T06:07:04,240   Removed fragmenstein==0.6.7 from https://files.pythonhosted.org/packages/5c/e2/d2ca713c7a98e86580ca55c8cea3bd011aab570829eb7306bb76471f41f5/Fragmenstein-0.6.7.tar.gz#sha256=7bc5579fba97a279e6a7714de296448d12a70b1f4bf0c078318f4ee77d74c6f5 from build tracker '/tmp/pip-req-tracker-ypi36p4i'
2021-12-19T06:07:04,248 Created temporary directory: /tmp/pip-unpack-u4n12mp_
2021-12-19T06:07:04,249 Building wheels for collected packages: fragmenstein
2021-12-19T06:07:04,256   Created temporary directory: /tmp/pip-wheel-zx0kisys
2021-12-19T06:07:04,257   Building wheel for fragmenstein (setup.py): started
2021-12-19T06:07:04,258   Destination directory: /tmp/pip-wheel-zx0kisys
2021-12-19T06:07:04,258   Running command /usr/bin/python3 -u -c 'import io, os, sys, setuptools, tokenize; sys.argv[0] = '"'"'/tmp/pip-wheel-sfmoiiqz/fragmenstein_9ae59d6d82ca4b5080f6bc79fdc44b72/setup.py'"'"'; __file__='"'"'/tmp/pip-wheel-sfmoiiqz/fragmenstein_9ae59d6d82ca4b5080f6bc79fdc44b72/setup.py'"'"';f = getattr(tokenize, '"'"'open'"'"', open)(__file__) if os.path.exists(__file__) else io.StringIO('"'"'from setuptools import setup; setup()'"'"');code = f.read().replace('"'"'\r\n'"'"', '"'"'\n'"'"');f.close();exec(compile(code, __file__, '"'"'exec'"'"'))' bdist_wheel -d /tmp/pip-wheel-zx0kisys
2021-12-19T06:07:05,627   /tmp/pip-wheel-sfmoiiqz/fragmenstein_9ae59d6d82ca4b5080f6bc79fdc44b72/setup.py:16: UserWarning: This 3.6+ script **requires** rdkit which ~cannot~ [could not] be pip installed. To install try either pip install rdkit-pypiconda install -c conda-forge rdkit or sudo apt-get/brew install python3-rdkit or visit rdkit documentation.
2021-12-19T06:07:05,629     'conda install -c conda-forge rdkit or ' +
2021-12-19T06:07:05,629   /tmp/pip-wheel-sfmoiiqz/fragmenstein_9ae59d6d82ca4b5080f6bc79fdc44b72/setup.py:20: UserWarning: The minimisation part of this code uses pyrosetta, which has to be downloaded from the Rosetta software site due to licencing. Without it only the classes Monster and Rectifier will work
2021-12-19T06:07:05,629     warn('The minimisation part of this code uses pyrosetta, which has to be downloaded from ' +
2021-12-19T06:07:05,630   /tmp/pip-wheel-sfmoiiqz/fragmenstein_9ae59d6d82ca4b5080f6bc79fdc44b72/setup.py:24: UserWarning: The module pymol2 is optionally required (conda or apt-get installable).
2021-12-19T06:07:05,630     warn('The module pymol2 is optionally required (conda or apt-get installable).')
2021-12-19T06:07:05,987   running bdist_wheel
2021-12-19T06:07:05,996   running build
2021-12-19T06:07:05,996   running build_py
2021-12-19T06:07:06,004   creating build
2021-12-19T06:07:06,004   creating build/lib
2021-12-19T06:07:06,005   creating build/lib/fragmenstein
2021-12-19T06:07:06,007   copying fragmenstein/__init__.py -> build/lib/fragmenstein
2021-12-19T06:07:06,011   copying fragmenstein/m_rmsd.py -> build/lib/fragmenstein
2021-12-19T06:07:06,016   creating build/lib/fragmenstein/cli
2021-12-19T06:07:06,017   copying fragmenstein/cli/__init__.py -> build/lib/fragmenstein/cli
2021-12-19T06:07:06,022   creating build/lib/fragmenstein/igor
2021-12-19T06:07:06,024   copying fragmenstein/igor/_igor_min.py -> build/lib/fragmenstein/igor
2021-12-19T06:07:06,029   copying fragmenstein/igor/__init__.py -> build/lib/fragmenstein/igor
2021-12-19T06:07:06,032   copying fragmenstein/igor/_igor_init.py -> build/lib/fragmenstein/igor
2021-12-19T06:07:06,036   copying fragmenstein/igor/_igor_utils.py -> build/lib/fragmenstein/igor
2021-12-19T06:07:06,042   creating build/lib/fragmenstein/victor
2021-12-19T06:07:06,043   copying fragmenstein/victor/_victor_journal.py -> build/lib/fragmenstein/victor
2021-12-19T06:07:06,047   copying fragmenstein/victor/__init__.py -> build/lib/fragmenstein/victor
2021-12-19T06:07:06,051   copying fragmenstein/victor/_victor_plonk.py -> build/lib/fragmenstein/victor
2021-12-19T06:07:06,055   copying fragmenstein/victor/_victor_common.py -> build/lib/fragmenstein/victor
2021-12-19T06:07:06,059   copying fragmenstein/victor/_victor_combine.py -> build/lib/fragmenstein/victor
2021-12-19T06:07:06,063   copying fragmenstein/victor/_victor_store.py -> build/lib/fragmenstein/victor
2021-12-19T06:07:06,067   copying fragmenstein/victor/_victor_utils.py -> build/lib/fragmenstein/victor
2021-12-19T06:07:06,073   copying fragmenstein/victor/_loggerwriter.py -> build/lib/fragmenstein/victor
2021-12-19T06:07:06,076   copying fragmenstein/victor/_victor_base.py -> build/lib/fragmenstein/victor
2021-12-19T06:07:06,080   copying fragmenstein/victor/_victor_validate.py -> build/lib/fragmenstein/victor
2021-12-19T06:07:06,083   copying fragmenstein/victor/_victor_place.py -> build/lib/fragmenstein/victor
2021-12-19T06:07:06,087   copying fragmenstein/victor/_victor_igor.py -> build/lib/fragmenstein/victor
2021-12-19T06:07:06,090   copying fragmenstein/victor/minimalPDB.py -> build/lib/fragmenstein/victor
2021-12-19T06:07:06,093   copying fragmenstein/victor/_victor_overridables.py -> build/lib/fragmenstein/victor
2021-12-19T06:07:06,096   copying fragmenstein/victor/_victor_safety.py -> build/lib/fragmenstein/victor
2021-12-19T06:07:06,101   creating build/lib/fragmenstein/mpro
2021-12-19T06:07:06,102   copying fragmenstein/mpro/__init__.py -> build/lib/fragmenstein/mpro
2021-12-19T06:07:06,108   creating build/lib/fragmenstein/monster
2021-12-19T06:07:06,110   copying fragmenstein/monster/unmerge_mapper.py -> build/lib/fragmenstein/monster
2021-12-19T06:07:06,115   copying fragmenstein/monster/__init__.py -> build/lib/fragmenstein/monster
2021-12-19T06:07:06,118   copying fragmenstein/monster/_combine.py -> build/lib/fragmenstein/monster
2021-12-19T06:07:06,121   copying fragmenstein/monster/_blend_place.py -> build/lib/fragmenstein/monster
2021-12-19T06:07:06,126   copying fragmenstein/monster/positional_mapping.py -> build/lib/fragmenstein/monster
2021-12-19T06:07:06,130   copying fragmenstein/monster/_base.py -> build/lib/fragmenstein/monster
2021-12-19T06:07:06,133   copying fragmenstein/monster/_modification_logging.py -> build/lib/fragmenstein/monster
2021-12-19T06:07:06,136   copying fragmenstein/monster/bond_provenance.py -> build/lib/fragmenstein/monster
2021-12-19T06:07:06,139   copying fragmenstein/monster/_communal.py -> build/lib/fragmenstein/monster
2021-12-19T06:07:06,144   copying fragmenstein/monster/_place.py -> build/lib/fragmenstein/monster
2021-12-19T06:07:06,147   copying fragmenstein/monster/_collapse_ring.py -> build/lib/fragmenstein/monster
2021-12-19T06:07:06,153   copying fragmenstein/monster/_utility.py -> build/lib/fragmenstein/monster
2021-12-19T06:07:06,157   copying fragmenstein/monster/_merge.py -> build/lib/fragmenstein/monster
2021-12-19T06:07:06,161   copying fragmenstein/monster/_join_neighboring.py -> build/lib/fragmenstein/monster
2021-12-19T06:07:06,166   creating build/lib/fragmenstein/laboratory
2021-12-19T06:07:06,167   copying fragmenstein/laboratory/__init__.py -> build/lib/fragmenstein/laboratory
2021-12-19T06:07:06,171   copying fragmenstein/laboratory/_process.py -> build/lib/fragmenstein/laboratory
2021-12-19T06:07:06,173   copying fragmenstein/laboratory/make_pyrosetta_options.py -> build/lib/fragmenstein/laboratory
2021-12-19T06:07:06,176   copying fragmenstein/laboratory/laboratory.py -> build/lib/fragmenstein/laboratory
2021-12-19T06:07:06,195   /usr/local/lib/python3.7/dist-packages/setuptools/command/install.py:37: SetuptoolsDeprecationWarning: setup.py install is deprecated. Use build and pip and other standards-based tools.
2021-12-19T06:07:06,196     setuptools.SetuptoolsDeprecationWarning,
2021-12-19T06:07:06,200   installing to build/bdist.linux-armv7l/wheel
2021-12-19T06:07:06,200   running install
2021-12-19T06:07:06,202   running install_lib
2021-12-19T06:07:06,208   creating build/bdist.linux-armv7l
2021-12-19T06:07:06,208   creating build/bdist.linux-armv7l/wheel
2021-12-19T06:07:06,212   creating build/bdist.linux-armv7l/wheel/fragmenstein
2021-12-19T06:07:06,213   copying build/lib/fragmenstein/__init__.py -> build/bdist.linux-armv7l/wheel/fragmenstein
2021-12-19T06:07:06,217   creating build/bdist.linux-armv7l/wheel/fragmenstein/cli
2021-12-19T06:07:06,219   copying build/lib/fragmenstein/cli/__init__.py -> build/bdist.linux-armv7l/wheel/fragmenstein/cli
2021-12-19T06:07:06,223   copying build/lib/fragmenstein/m_rmsd.py -> build/bdist.linux-armv7l/wheel/fragmenstein
2021-12-19T06:07:06,228   creating build/bdist.linux-armv7l/wheel/fragmenstein/igor
2021-12-19T06:07:06,230   copying build/lib/fragmenstein/igor/_igor_min.py -> build/bdist.linux-armv7l/wheel/fragmenstein/igor
2021-12-19T06:07:06,235   copying build/lib/fragmenstein/igor/__init__.py -> build/bdist.linux-armv7l/wheel/fragmenstein/igor
2021-12-19T06:07:06,238   copying build/lib/fragmenstein/igor/_igor_init.py -> build/bdist.linux-armv7l/wheel/fragmenstein/igor
2021-12-19T06:07:06,242   copying build/lib/fragmenstein/igor/_igor_utils.py -> build/bdist.linux-armv7l/wheel/fragmenstein/igor
2021-12-19T06:07:06,247   creating build/bdist.linux-armv7l/wheel/fragmenstein/victor
2021-12-19T06:07:06,248   copying build/lib/fragmenstein/victor/_victor_journal.py -> build/bdist.linux-armv7l/wheel/fragmenstein/victor
2021-12-19T06:07:06,253   copying build/lib/fragmenstein/victor/__init__.py -> build/bdist.linux-armv7l/wheel/fragmenstein/victor
2021-12-19T06:07:06,256   copying build/lib/fragmenstein/victor/_victor_plonk.py -> build/bdist.linux-armv7l/wheel/fragmenstein/victor
2021-12-19T06:07:06,260   copying build/lib/fragmenstein/victor/_victor_common.py -> build/bdist.linux-armv7l/wheel/fragmenstein/victor
2021-12-19T06:07:06,265   copying build/lib/fragmenstein/victor/_victor_combine.py -> build/bdist.linux-armv7l/wheel/fragmenstein/victor
2021-12-19T06:07:06,268   copying build/lib/fragmenstein/victor/_victor_store.py -> build/bdist.linux-armv7l/wheel/fragmenstein/victor
2021-12-19T06:07:06,272   copying build/lib/fragmenstein/victor/_victor_utils.py -> build/bdist.linux-armv7l/wheel/fragmenstein/victor
2021-12-19T06:07:06,277   copying build/lib/fragmenstein/victor/_loggerwriter.py -> build/bdist.linux-armv7l/wheel/fragmenstein/victor
2021-12-19T06:07:06,280   copying build/lib/fragmenstein/victor/_victor_base.py -> build/bdist.linux-armv7l/wheel/fragmenstein/victor
2021-12-19T06:07:06,284   copying build/lib/fragmenstein/victor/_victor_validate.py -> build/bdist.linux-armv7l/wheel/fragmenstein/victor
2021-12-19T06:07:06,287   copying build/lib/fragmenstein/victor/_victor_place.py -> build/bdist.linux-armv7l/wheel/fragmenstein/victor
2021-12-19T06:07:06,291   copying build/lib/fragmenstein/victor/_victor_igor.py -> build/bdist.linux-armv7l/wheel/fragmenstein/victor
2021-12-19T06:07:06,295   copying build/lib/fragmenstein/victor/minimalPDB.py -> build/bdist.linux-armv7l/wheel/fragmenstein/victor
2021-12-19T06:07:06,299   copying build/lib/fragmenstein/victor/_victor_overridables.py -> build/bdist.linux-armv7l/wheel/fragmenstein/victor
2021-12-19T06:07:06,302   copying build/lib/fragmenstein/victor/_victor_safety.py -> build/bdist.linux-armv7l/wheel/fragmenstein/victor
2021-12-19T06:07:06,306   creating build/bdist.linux-armv7l/wheel/fragmenstein/mpro
2021-12-19T06:07:06,307   copying build/lib/fragmenstein/mpro/__init__.py -> build/bdist.linux-armv7l/wheel/fragmenstein/mpro
2021-12-19T06:07:06,314   creating build/bdist.linux-armv7l/wheel/fragmenstein/monster
2021-12-19T06:07:06,315   copying build/lib/fragmenstein/monster/unmerge_mapper.py -> build/bdist.linux-armv7l/wheel/fragmenstein/monster
2021-12-19T06:07:06,320   copying build/lib/fragmenstein/monster/__init__.py -> build/bdist.linux-armv7l/wheel/fragmenstein/monster
2021-12-19T06:07:06,323   copying build/lib/fragmenstein/monster/_combine.py -> build/bdist.linux-armv7l/wheel/fragmenstein/monster
2021-12-19T06:07:06,327   copying build/lib/fragmenstein/monster/_blend_place.py -> build/bdist.linux-armv7l/wheel/fragmenstein/monster
2021-12-19T06:07:06,332   copying build/lib/fragmenstein/monster/positional_mapping.py -> build/bdist.linux-armv7l/wheel/fragmenstein/monster
2021-12-19T06:07:06,336   copying build/lib/fragmenstein/monster/_base.py -> build/bdist.linux-armv7l/wheel/fragmenstein/monster
2021-12-19T06:07:06,340   copying build/lib/fragmenstein/monster/_modification_logging.py -> build/bdist.linux-armv7l/wheel/fragmenstein/monster
2021-12-19T06:07:06,343   copying build/lib/fragmenstein/monster/bond_provenance.py -> build/bdist.linux-armv7l/wheel/fragmenstein/monster
2021-12-19T06:07:06,346   copying build/lib/fragmenstein/monster/_communal.py -> build/bdist.linux-armv7l/wheel/fragmenstein/monster
2021-12-19T06:07:06,351   copying build/lib/fragmenstein/monster/_place.py -> build/bdist.linux-armv7l/wheel/fragmenstein/monster
2021-12-19T06:07:06,354   copying build/lib/fragmenstein/monster/_collapse_ring.py -> build/bdist.linux-armv7l/wheel/fragmenstein/monster
2021-12-19T06:07:06,361   copying build/lib/fragmenstein/monster/_utility.py -> build/bdist.linux-armv7l/wheel/fragmenstein/monster
2021-12-19T06:07:06,365   copying build/lib/fragmenstein/monster/_merge.py -> build/bdist.linux-armv7l/wheel/fragmenstein/monster
2021-12-19T06:07:06,369   copying build/lib/fragmenstein/monster/_join_neighboring.py -> build/bdist.linux-armv7l/wheel/fragmenstein/monster
2021-12-19T06:07:06,374   creating build/bdist.linux-armv7l/wheel/fragmenstein/laboratory
2021-12-19T06:07:06,376   copying build/lib/fragmenstein/laboratory/__init__.py -> build/bdist.linux-armv7l/wheel/fragmenstein/laboratory
2021-12-19T06:07:06,379   copying build/lib/fragmenstein/laboratory/_process.py -> build/bdist.linux-armv7l/wheel/fragmenstein/laboratory
2021-12-19T06:07:06,382   copying build/lib/fragmenstein/laboratory/make_pyrosetta_options.py -> build/bdist.linux-armv7l/wheel/fragmenstein/laboratory
2021-12-19T06:07:06,386   copying build/lib/fragmenstein/laboratory/laboratory.py -> build/bdist.linux-armv7l/wheel/fragmenstein/laboratory
2021-12-19T06:07:06,389   running install_egg_info
2021-12-19T06:07:06,428   running egg_info
2021-12-19T06:07:06,428   writing Fragmenstein.egg-info/PKG-INFO
2021-12-19T06:07:06,431   writing dependency_links to Fragmenstein.egg-info/dependency_links.txt
2021-12-19T06:07:06,435   writing entry points to Fragmenstein.egg-info/entry_points.txt
2021-12-19T06:07:06,436   writing requirements to Fragmenstein.egg-info/requires.txt
2021-12-19T06:07:06,438   writing top-level names to Fragmenstein.egg-info/top_level.txt
2021-12-19T06:07:06,456   reading manifest file 'Fragmenstein.egg-info/SOURCES.txt'
2021-12-19T06:07:06,471   writing manifest file 'Fragmenstein.egg-info/SOURCES.txt'
2021-12-19T06:07:06,474   Copying Fragmenstein.egg-info to build/bdist.linux-armv7l/wheel/Fragmenstein-0.6.7-py3.7.egg-info
2021-12-19T06:07:06,495   running install_scripts
2021-12-19T06:07:06,650   creating build/bdist.linux-armv7l/wheel/Fragmenstein-0.6.7.dist-info/WHEEL
2021-12-19T06:07:06,655   creating '/tmp/pip-wheel-zx0kisys/Fragmenstein-0.6.7-py3-none-any.whl' and adding 'build/bdist.linux-armv7l/wheel' to it
2021-12-19T06:07:06,662   adding 'fragmenstein/__init__.py'
2021-12-19T06:07:06,666   adding 'fragmenstein/m_rmsd.py'
2021-12-19T06:07:06,670   adding 'fragmenstein/cli/__init__.py'
2021-12-19T06:07:06,674   adding 'fragmenstein/igor/__init__.py'
2021-12-19T06:07:06,677   adding 'fragmenstein/igor/_igor_init.py'
2021-12-19T06:07:06,681   adding 'fragmenstein/igor/_igor_min.py'
2021-12-19T06:07:06,684   adding 'fragmenstein/igor/_igor_utils.py'
2021-12-19T06:07:06,688   adding 'fragmenstein/laboratory/__init__.py'
2021-12-19T06:07:06,690   adding 'fragmenstein/laboratory/_process.py'
2021-12-19T06:07:06,693   adding 'fragmenstein/laboratory/laboratory.py'
2021-12-19T06:07:06,695   adding 'fragmenstein/laboratory/make_pyrosetta_options.py'
2021-12-19T06:07:06,700   adding 'fragmenstein/monster/__init__.py'
2021-12-19T06:07:06,703   adding 'fragmenstein/monster/_base.py'
2021-12-19T06:07:06,710   adding 'fragmenstein/monster/_blend_place.py'
2021-12-19T06:07:06,724   adding 'fragmenstein/monster/_collapse_ring.py'
2021-12-19T06:07:06,728   adding 'fragmenstein/monster/_combine.py'
2021-12-19T06:07:06,733   adding 'fragmenstein/monster/_communal.py'
2021-12-19T06:07:06,736   adding 'fragmenstein/monster/_join_neighboring.py'
2021-12-19T06:07:06,741   adding 'fragmenstein/monster/_merge.py'
2021-12-19T06:07:06,743   adding 'fragmenstein/monster/_modification_logging.py'
2021-12-19T06:07:06,746   adding 'fragmenstein/monster/_place.py'
2021-12-19T06:07:06,750   adding 'fragmenstein/monster/_utility.py'
2021-12-19T06:07:06,753   adding 'fragmenstein/monster/bond_provenance.py'
2021-12-19T06:07:06,755   adding 'fragmenstein/monster/positional_mapping.py'
2021-12-19T06:07:06,761   adding 'fragmenstein/monster/unmerge_mapper.py'
2021-12-19T06:07:06,765   adding 'fragmenstein/mpro/__init__.py'
2021-12-19T06:07:06,769   adding 'fragmenstein/victor/__init__.py'
2021-12-19T06:07:06,772   adding 'fragmenstein/victor/_loggerwriter.py'
2021-12-19T06:07:06,775   adding 'fragmenstein/victor/_victor_base.py'
2021-12-19T06:07:06,778   adding 'fragmenstein/victor/_victor_combine.py'
2021-12-19T06:07:06,782   adding 'fragmenstein/victor/_victor_common.py'
2021-12-19T06:07:06,785   adding 'fragmenstein/victor/_victor_igor.py'
2021-12-19T06:07:06,788   adding 'fragmenstein/victor/_victor_journal.py'
2021-12-19T06:07:06,790   adding 'fragmenstein/victor/_victor_overridables.py'
2021-12-19T06:07:06,793   adding 'fragmenstein/victor/_victor_place.py'
2021-12-19T06:07:06,795   adding 'fragmenstein/victor/_victor_plonk.py'
2021-12-19T06:07:06,798   adding 'fragmenstein/victor/_victor_safety.py'
2021-12-19T06:07:06,800   adding 'fragmenstein/victor/_victor_store.py'
2021-12-19T06:07:06,806   adding 'fragmenstein/victor/_victor_utils.py'
2021-12-19T06:07:06,809   adding 'fragmenstein/victor/_victor_validate.py'
2021-12-19T06:07:06,812   adding 'fragmenstein/victor/minimalPDB.py'
2021-12-19T06:07:06,814   adding 'Fragmenstein-0.6.7.dist-info/METADATA'
2021-12-19T06:07:06,815   adding 'Fragmenstein-0.6.7.dist-info/WHEEL'
2021-12-19T06:07:06,817   adding 'Fragmenstein-0.6.7.dist-info/entry_points.txt'
2021-12-19T06:07:06,818   adding 'Fragmenstein-0.6.7.dist-info/top_level.txt'
2021-12-19T06:07:06,820   adding 'Fragmenstein-0.6.7.dist-info/RECORD'
2021-12-19T06:07:06,827   removing build/bdist.linux-armv7l/wheel
2021-12-19T06:07:06,972   Building wheel for fragmenstein (setup.py): finished with status 'done'
2021-12-19T06:07:06,979   Created wheel for fragmenstein: filename=Fragmenstein-0.6.7-py3-none-any.whl size=101040 sha256=63fbcc65615bb01dbf461e7bada7ae323d78d0db76c04876bc510d2b449c65c8
2021-12-19T06:07:06,980   Stored in directory: /tmp/pip-ephem-wheel-cache-f2577ng6/wheels/ec/79/6b/4ade87f1112344dd4eb12b2720664cbc98ac767e191ff245c5
2021-12-19T06:07:07,004 Successfully built fragmenstein
2021-12-19T06:07:07,017 Removed build tracker: '/tmp/pip-req-tracker-ypi36p4i'