2021-12-19T06:11:26,725 Created temporary directory: /tmp/pip-ephem-wheel-cache-pfkw4gzh 2021-12-19T06:11:26,732 Created temporary directory: /tmp/pip-req-tracker-jmm3r2ot 2021-12-19T06:11:26,732 Initialized build tracking at /tmp/pip-req-tracker-jmm3r2ot 2021-12-19T06:11:26,733 Created build tracker: /tmp/pip-req-tracker-jmm3r2ot 2021-12-19T06:11:26,733 Entered build tracker: /tmp/pip-req-tracker-jmm3r2ot 2021-12-19T06:11:26,735 Created temporary directory: /tmp/pip-wheel-3c6qbbd7 2021-12-19T06:11:26,791 Looking in indexes: https://pypi.org/simple, https://www.piwheels.org/simple 2021-12-19T06:11:26,795 2 location(s) to search for versions of args-oap: 2021-12-19T06:11:26,795 * https://pypi.org/simple/args-oap/ 2021-12-19T06:11:26,795 * https://www.piwheels.org/simple/args-oap/ 2021-12-19T06:11:26,796 Fetching project page and analyzing links: https://pypi.org/simple/args-oap/ 2021-12-19T06:11:26,798 Getting page https://pypi.org/simple/args-oap/ 2021-12-19T06:11:26,802 Found index url https://pypi.org/simple 2021-12-19T06:11:27,038 Found link https://files.pythonhosted.org/packages/e4/cb/c46079a79ba496231bc528ed0a2c5286d0e814efc9093330ed1d91a6e4aa/ARGs_OAP-2.3.1.tar.gz#sha256=0cc2d4865a323d9dd40886a16f6dbb21d8d79fa5e7262c1819f11f2d6bd45187 (from https://pypi.org/simple/args-oap/), version: 2.3.1 2021-12-19T06:11:27,039 Found link https://files.pythonhosted.org/packages/f4/20/99c43f0b19993e1af5c375b51fd3841bcc5c1fc5dfd82ce65d8e0eebb33c/ARGs_OAP-2.3.2.tar.gz#sha256=b40d0528c1a9025ab0c1b97928fd453f230d1b6cf0e618ab8b50cb9cc2283303 (from https://pypi.org/simple/args-oap/), version: 2.3.2 2021-12-19T06:11:27,039 Fetching project page and analyzing links: https://www.piwheels.org/simple/args-oap/ 2021-12-19T06:11:27,040 Getting page https://www.piwheels.org/simple/args-oap/ 2021-12-19T06:11:27,043 Found index url https://www.piwheels.org/simple 2021-12-19T06:11:27,306 Given no hashes to check 1 links for project 'args-oap': discarding no candidates 2021-12-19T06:11:27,339 Collecting args-oap==2.3.2 2021-12-19T06:11:27,342 Created temporary directory: /tmp/pip-unpack-h__limnx 2021-12-19T06:11:29,630 Downloading ARGs_OAP-2.3.2.tar.gz (50.0 MB) 2021-12-19T06:12:14,639 Added args-oap==2.3.2 from https://files.pythonhosted.org/packages/f4/20/99c43f0b19993e1af5c375b51fd3841bcc5c1fc5dfd82ce65d8e0eebb33c/ARGs_OAP-2.3.2.tar.gz#sha256=b40d0528c1a9025ab0c1b97928fd453f230d1b6cf0e618ab8b50cb9cc2283303 to build tracker '/tmp/pip-req-tracker-jmm3r2ot' 2021-12-19T06:12:14,642 Running setup.py (path:/tmp/pip-wheel-3c6qbbd7/args-oap_441dc51d631a42799b35a2d9405c7df4/setup.py) egg_info for package args-oap 2021-12-19T06:12:14,643 Created temporary directory: /tmp/pip-pip-egg-info-g7k1adqo 2021-12-19T06:12:14,644 Running command python setup.py egg_info 2021-12-19T06:12:16,598 running egg_info 2021-12-19T06:12:16,604 creating /tmp/pip-pip-egg-info-g7k1adqo/ARGs_OAP.egg-info 2021-12-19T06:12:16,607 writing dependency_links to /tmp/pip-pip-egg-info-g7k1adqo/ARGs_OAP.egg-info/dependency_links.txt 2021-12-19T06:12:16,610 writing top-level names to /tmp/pip-pip-egg-info-g7k1adqo/ARGs_OAP.egg-info/top_level.txt 2021-12-19T06:12:16,612 writing /tmp/pip-pip-egg-info-g7k1adqo/ARGs_OAP.egg-info/PKG-INFO 2021-12-19T06:12:16,615 writing entry points to /tmp/pip-pip-egg-info-g7k1adqo/ARGs_OAP.egg-info/entry_points.txt 2021-12-19T06:12:16,620 writing manifest file '/tmp/pip-pip-egg-info-g7k1adqo/ARGs_OAP.egg-info/SOURCES.txt' 2021-12-19T06:12:17,081 reading manifest file '/tmp/pip-pip-egg-info-g7k1adqo/ARGs_OAP.egg-info/SOURCES.txt' 2021-12-19T06:12:17,084 reading manifest template 'MANIFEST.in' 2021-12-19T06:12:17,086 warning: no files found matching 'requirements.txt' 2021-12-19T06:12:19,542 warning: no previously-included files matching '*.DS_Store' found anywhere in distribution 2021-12-19T06:12:19,775 writing manifest file '/tmp/pip-pip-egg-info-g7k1adqo/ARGs_OAP.egg-info/SOURCES.txt' 2021-12-19T06:12:19,921 Source in /tmp/pip-wheel-3c6qbbd7/args-oap_441dc51d631a42799b35a2d9405c7df4 has version 2.3.2, which satisfies requirement args-oap==2.3.2 from https://files.pythonhosted.org/packages/f4/20/99c43f0b19993e1af5c375b51fd3841bcc5c1fc5dfd82ce65d8e0eebb33c/ARGs_OAP-2.3.2.tar.gz#sha256=b40d0528c1a9025ab0c1b97928fd453f230d1b6cf0e618ab8b50cb9cc2283303 2021-12-19T06:12:19,923 Removed args-oap==2.3.2 from https://files.pythonhosted.org/packages/f4/20/99c43f0b19993e1af5c375b51fd3841bcc5c1fc5dfd82ce65d8e0eebb33c/ARGs_OAP-2.3.2.tar.gz#sha256=b40d0528c1a9025ab0c1b97928fd453f230d1b6cf0e618ab8b50cb9cc2283303 from build tracker '/tmp/pip-req-tracker-jmm3r2ot' 2021-12-19T06:12:19,931 Created temporary directory: /tmp/pip-unpack-yyri10xf 2021-12-19T06:12:19,932 Building wheels for collected packages: args-oap 2021-12-19T06:12:19,941 Created temporary directory: /tmp/pip-wheel-22orz42f 2021-12-19T06:12:19,942 Building wheel for args-oap (setup.py): started 2021-12-19T06:12:19,942 Destination directory: /tmp/pip-wheel-22orz42f 2021-12-19T06:12:19,943 Running command /usr/bin/python3 -u -c 'import sys, setuptools, tokenize; sys.argv[0] = '"'"'/tmp/pip-wheel-3c6qbbd7/args-oap_441dc51d631a42799b35a2d9405c7df4/setup.py'"'"'; __file__='"'"'/tmp/pip-wheel-3c6qbbd7/args-oap_441dc51d631a42799b35a2d9405c7df4/setup.py'"'"';f=getattr(tokenize, '"'"'open'"'"', open)(__file__);code=f.read().replace('"'"'\r\n'"'"', '"'"'\n'"'"');f.close();exec(compile(code, __file__, '"'"'exec'"'"'))' bdist_wheel -d /tmp/pip-wheel-22orz42f 2021-12-19T06:12:21,838 running bdist_wheel 2021-12-19T06:12:21,854 running build 2021-12-19T06:12:21,855 running build_py 2021-12-19T06:12:22,193 creating build 2021-12-19T06:12:22,195 creating build/lib 2021-12-19T06:12:22,197 creating build/lib/ARGs_OAP 2021-12-19T06:12:22,201 copying ARGs_OAP/stage_one.py -> build/lib/ARGs_OAP 2021-12-19T06:12:22,206 copying ARGs_OAP/__init__.py -> build/lib/ARGs_OAP 2021-12-19T06:12:22,210 copying ARGs_OAP/ARGs_OAP.py -> build/lib/ARGs_OAP 2021-12-19T06:12:22,215 copying ARGs_OAP/stage_two.py -> build/lib/ARGs_OAP 2021-12-19T06:12:22,301 copying ARGs_OAP/README.md -> build/lib/ARGs_OAP 2021-12-19T06:12:22,307 copying ARGs_OAP/argoap_pipeline_stageone_version2.3 -> build/lib/ARGs_OAP 2021-12-19T06:12:22,314 copying ARGs_OAP/argoap_pipeline_stageone_version2 -> build/lib/ARGs_OAP 2021-12-19T06:12:22,321 copying ARGs_OAP/index.rst -> build/lib/ARGs_OAP 2021-12-19T06:12:22,328 copying ARGs_OAP/argoap_pipeline_stagetwo_version2 -> build/lib/ARGs_OAP 2021-12-19T06:12:22,341 creating build/lib/ARGs_OAP/DB 2021-12-19T06:12:22,345 copying ARGs_OAP/DB/gg85.fasta -> build/lib/ARGs_OAP/DB 2021-12-19T06:12:23,033 copying ARGs_OAP/DB/SARG.2.2.diamondv0.9.24.dmnd -> build/lib/ARGs_OAP/DB 2021-12-19T06:12:24,370 copying ARGs_OAP/DB/update_45_sarg2.0_16s.table_201704.txt -> build/lib/ARGs_OAP/DB 2021-12-19T06:12:24,398 copying ARGs_OAP/DB/all_KO30_name.list -> build/lib/ARGs_OAP/DB 2021-12-19T06:12:24,461 copying ARGs_OAP/DB/SARG.2.2.fasta.psq -> build/lib/ARGs_OAP/DB 2021-12-19T06:12:24,951 copying ARGs_OAP/DB/KO30_DIAMOND.dmnd -> build/lib/ARGs_OAP/DB 2021-12-19T06:12:25,563 copying ARGs_OAP/DB/update_45_sarg2.0_cell.table_201704.txt -> build/lib/ARGs_OAP/DB 2021-12-19T06:12:25,591 copying ARGs_OAP/DB/gg85_yinxiaole.fasta.mmi -> build/lib/ARGs_OAP/DB 2021-12-19T06:12:27,396 copying ARGs_OAP/DB/SARG.2.2.fasta.pin -> build/lib/ARGs_OAP/DB 2021-12-19T06:12:27,411 copying ARGs_OAP/DB/structure_20181107.LIST -> build/lib/ARGs_OAP/DB 2021-12-19T06:12:27,455 copying ARGs_OAP/DB/SARG.2.2.fasta -> build/lib/ARGs_OAP/DB 2021-12-19T06:12:28,783 copying ARGs_OAP/DB/SARG.2.2.fasta.phr -> build/lib/ARGs_OAP/DB 2021-12-19T06:12:29,701 creating build/lib/ARGs_OAP/bin 2021-12-19T06:12:29,703 copying ARGs_OAP/bin/copy_correction.pl -> build/lib/ARGs_OAP/bin 2021-12-19T06:12:29,708 copying ARGs_OAP/bin/fastp -> build/lib/ARGs_OAP/bin 2021-12-19T06:12:30,428 copying ARGs_OAP/bin/de-replicate.pl -> build/lib/ARGs_OAP/bin 2021-12-19T06:12:30,433 copying ARGs_OAP/bin/minimap2 -> build/lib/ARGs_OAP/bin 2021-12-19T06:12:30,541 copying ARGs_OAP/bin/Fq2fa.pl -> build/lib/ARGs_OAP/bin 2021-12-19T06:12:30,546 copying ARGs_OAP/bin/extract_usearch_reads.pl -> build/lib/ARGs_OAP/bin 2021-12-19T06:12:30,553 copying ARGs_OAP/bin/diamond -> build/lib/ARGs_OAP/bin 2021-12-19T06:12:30,642 copying ARGs_OAP/bin/obtain_community.pl -> build/lib/ARGs_OAP/bin 2021-12-19T06:12:30,649 copying ARGs_OAP/bin/diamondv0.9.24 -> build/lib/ARGs_OAP/bin 2021-12-19T06:12:31,313 copying ARGs_OAP/bin/blastx -> build/lib/ARGs_OAP/bin 2021-12-19T06:12:33,813 copying ARGs_OAP/bin/merge_extracted_fa_update_metadate.v2.3.pl -> build/lib/ARGs_OAP/bin 2021-12-19T06:12:33,820 copying ARGs_OAP/bin/samtools -> build/lib/ARGs_OAP/bin 2021-12-19T06:12:33,874 copying ARGs_OAP/bin/divide_extract.fa_meta_data_online.pl -> build/lib/ARGs_OAP/bin 2021-12-19T06:12:33,882 creating build/lib/ARGs_OAP/bin/bbmap 2021-12-19T06:12:33,886 copying ARGs_OAP/bin/bbmap/mergeOTUs.sh -> build/lib/ARGs_OAP/bin/bbmap 2021-12-19T06:12:33,894 copying ARGs_OAP/bin/bbmap/summarizesketch.sh -> build/lib/ARGs_OAP/bin/bbmap 2021-12-19T06:12:33,900 copying ARGs_OAP/bin/bbmap/removecatdogmousehuman.sh -> build/lib/ARGs_OAP/bin/bbmap 2021-12-19T06:12:33,906 copying ARGs_OAP/bin/bbmap/splitsam.sh -> build/lib/ARGs_OAP/bin/bbmap 2021-12-19T06:12:33,912 copying ARGs_OAP/bin/bbmap/summarizeseal.sh -> build/lib/ARGs_OAP/bin/bbmap 2021-12-19T06:12:33,920 copying ARGs_OAP/bin/bbmap/comparevcf.sh -> build/lib/ARGs_OAP/bin/bbmap 2021-12-19T06:12:33,927 copying ARGs_OAP/bin/bbmap/kmercountexact.sh -> build/lib/ARGs_OAP/bin/bbmap 2021-12-19T06:12:33,934 copying ARGs_OAP/bin/bbmap/bbest.sh -> build/lib/ARGs_OAP/bin/bbmap 2021-12-19T06:12:33,939 copying ARGs_OAP/bin/bbmap/sketch.sh -> build/lib/ARGs_OAP/bin/bbmap 2021-12-19T06:12:33,945 copying ARGs_OAP/bin/bbmap/readlength.sh -> build/lib/ARGs_OAP/bin/bbmap 2021-12-19T06:12:33,950 copying ARGs_OAP/bin/bbmap/README.md -> build/lib/ARGs_OAP/bin/bbmap 2021-12-19T06:12:33,956 copying ARGs_OAP/bin/bbmap/loglog.sh -> build/lib/ARGs_OAP/bin/bbmap 2021-12-19T06:12:33,963 copying ARGs_OAP/bin/bbmap/bbversion.sh -> build/lib/ARGs_OAP/bin/bbmap 2021-12-19T06:12:33,969 copying ARGs_OAP/bin/bbmap/printtime.sh -> build/lib/ARGs_OAP/bin/bbmap 2021-12-19T06:12:33,975 copying ARGs_OAP/bin/bbmap/kmerfilterset.sh -> build/lib/ARGs_OAP/bin/bbmap 2021-12-19T06:12:33,981 copying ARGs_OAP/bin/bbmap/testformat2.sh -> build/lib/ARGs_OAP/bin/bbmap 2021-12-19T06:12:33,986 copying ARGs_OAP/bin/bbmap/gradesam.sh -> build/lib/ARGs_OAP/bin/bbmap 2021-12-19T06:12:33,991 copying ARGs_OAP/bin/bbmap/plotgc.sh -> build/lib/ARGs_OAP/bin/bbmap 2021-12-19T06:12:33,997 copying ARGs_OAP/bin/bbmap/bbfakereads.sh -> build/lib/ARGs_OAP/bin/bbmap 2021-12-19T06:12:34,004 copying ARGs_OAP/bin/bbmap/filterbytaxa.sh -> build/lib/ARGs_OAP/bin/bbmap 2021-12-19T06:12:34,011 copying ARGs_OAP/bin/bbmap/seal.sh -> build/lib/ARGs_OAP/bin/bbmap 2021-12-19T06:12:34,018 copying ARGs_OAP/bin/bbmap/lilypad.sh -> build/lib/ARGs_OAP/bin/bbmap 2021-12-19T06:12:34,023 copying ARGs_OAP/bin/bbmap/partition.sh -> build/lib/ARGs_OAP/bin/bbmap 2021-12-19T06:12:34,028 copying ARGs_OAP/bin/bbmap/processfrag.sh -> build/lib/ARGs_OAP/bin/bbmap 2021-12-19T06:12:34,033 copying ARGs_OAP/bin/bbmap/fungalrelease.sh -> build/lib/ARGs_OAP/bin/bbmap 2021-12-19T06:12:34,039 copying ARGs_OAP/bin/bbmap/mergeribo.sh -> build/lib/ARGs_OAP/bin/bbmap 2021-12-19T06:12:34,046 copying ARGs_OAP/bin/bbmap/removehuman.sh -> build/lib/ARGs_OAP/bin/bbmap 2021-12-19T06:12:34,053 copying ARGs_OAP/bin/bbmap/addadapters.sh -> build/lib/ARGs_OAP/bin/bbmap 2021-12-19T06:12:34,059 copying ARGs_OAP/bin/bbmap/countsharedlines.sh -> build/lib/ARGs_OAP/bin/bbmap 2021-12-19T06:12:34,064 copying ARGs_OAP/bin/bbmap/callgenes.sh -> build/lib/ARGs_OAP/bin/bbmap 2021-12-19T06:12:34,069 copying ARGs_OAP/bin/bbmap/textfile.sh -> build/lib/ARGs_OAP/bin/bbmap 2021-12-19T06:12:34,074 copying ARGs_OAP/bin/bbmap/removebadbarcodes.sh -> build/lib/ARGs_OAP/bin/bbmap 2021-12-19T06:12:34,081 copying ARGs_OAP/bin/bbmap/sortbyname.sh -> build/lib/ARGs_OAP/bin/bbmap 2021-12-19T06:12:34,087 copying ARGs_OAP/bin/bbmap/invertkey.sh -> build/lib/ARGs_OAP/bin/bbmap 2021-12-19T06:12:34,094 copying ARGs_OAP/bin/bbmap/filterassemblysummary.sh -> build/lib/ARGs_OAP/bin/bbmap 2021-12-19T06:12:34,100 copying ARGs_OAP/bin/bbmap/splitnextera.sh -> build/lib/ARGs_OAP/bin/bbmap 2021-12-19T06:12:34,105 copying ARGs_OAP/bin/bbmap/shrinkaccession.sh -> build/lib/ARGs_OAP/bin/bbmap 2021-12-19T06:12:34,110 copying ARGs_OAP/bin/bbmap/bbmerge.sh -> build/lib/ARGs_OAP/bin/bbmap 2021-12-19T06:12:34,117 copying ARGs_OAP/bin/bbmap/diskbench.sh -> build/lib/ARGs_OAP/bin/bbmap 2021-12-19T06:12:34,123 copying ARGs_OAP/bin/bbmap/idmatrix.sh -> build/lib/ARGs_OAP/bin/bbmap 2021-12-19T06:12:34,130 copying ARGs_OAP/bin/bbmap/sketchblacklist.sh -> build/lib/ARGs_OAP/bin/bbmap 2021-12-19T06:12:34,137 copying ARGs_OAP/bin/bbmap/applyvariants.sh -> build/lib/ARGs_OAP/bin/bbmap 2021-12-19T06:12:34,142 copying ARGs_OAP/bin/bbmap/pileup.sh -> build/lib/ARGs_OAP/bin/bbmap 2021-12-19T06:12:34,148 copying ARGs_OAP/bin/bbmap/bbsplitpairs.sh -> build/lib/ARGs_OAP/bin/bbmap 2021-12-19T06:12:34,153 copying ARGs_OAP/bin/bbmap/callpeaks.sh -> build/lib/ARGs_OAP/bin/bbmap 2021-12-19T06:12:34,158 copying ARGs_OAP/bin/bbmap/splitbytaxa.sh -> build/lib/ARGs_OAP/bin/bbmap 2021-12-19T06:12:34,165 copying ARGs_OAP/bin/bbmap/kmerlimit.sh -> build/lib/ARGs_OAP/bin/bbmap 2021-12-19T06:12:34,171 copying ARGs_OAP/bin/bbmap/crossblock.sh -> build/lib/ARGs_OAP/bin/bbmap 2021-12-19T06:12:34,178 copying ARGs_OAP/bin/bbmap/filterbarcodes.sh -> build/lib/ARGs_OAP/bin/bbmap 2021-12-19T06:12:34,183 copying ARGs_OAP/bin/bbmap/makechimeras.sh -> build/lib/ARGs_OAP/bin/bbmap 2021-12-19T06:12:34,188 copying ARGs_OAP/bin/bbmap/shuffle.sh -> build/lib/ARGs_OAP/bin/bbmap 2021-12-19T06:12:34,193 copying ARGs_OAP/bin/bbmap/analyzesketchresults.sh -> build/lib/ARGs_OAP/bin/bbmap 2021-12-19T06:12:34,198 copying ARGs_OAP/bin/bbmap/vcf2gff.sh -> build/lib/ARGs_OAP/bin/bbmap 2021-12-19T06:12:34,204 copying ARGs_OAP/bin/bbmap/bbmap.sh -> build/lib/ARGs_OAP/bin/bbmap 2021-12-19T06:12:34,213 copying ARGs_OAP/bin/bbmap/randomreads.sh -> build/lib/ARGs_OAP/bin/bbmap 2021-12-19T06:12:34,221 copying ARGs_OAP/bin/bbmap/tadwrapper.sh -> build/lib/ARGs_OAP/bin/bbmap 2021-12-19T06:12:34,226 copying ARGs_OAP/bin/bbmap/postfilter.sh -> build/lib/ARGs_OAP/bin/bbmap 2021-12-19T06:12:34,231 copying ARGs_OAP/bin/bbmap/calctruequality.sh -> build/lib/ARGs_OAP/bin/bbmap 2021-12-19T06:12:34,237 copying ARGs_OAP/bin/bbmap/bloomfilter.sh -> build/lib/ARGs_OAP/bin/bbmap 2021-12-19T06:12:34,242 copying ARGs_OAP/bin/bbmap/filtervcf.sh -> build/lib/ARGs_OAP/bin/bbmap 2021-12-19T06:12:34,249 copying ARGs_OAP/bin/bbmap/kmerlimit2.sh -> build/lib/ARGs_OAP/bin/bbmap 2021-12-19T06:12:34,256 copying ARGs_OAP/bin/bbmap/subsketch.sh -> build/lib/ARGs_OAP/bin/bbmap 2021-12-19T06:12:34,262 copying ARGs_OAP/bin/bbmap/renameimg.sh -> build/lib/ARGs_OAP/bin/bbmap 2021-12-19T06:12:34,267 copying ARGs_OAP/bin/bbmap/bbwrap.sh -> build/lib/ARGs_OAP/bin/bbmap 2021-12-19T06:12:34,272 copying ARGs_OAP/bin/bbmap/bbnorm.sh -> build/lib/ARGs_OAP/bin/bbmap 2021-12-19T06:12:34,278 copying ARGs_OAP/bin/bbmap/plotflowcell.sh -> build/lib/ARGs_OAP/bin/bbmap 2021-12-19T06:12:34,284 copying ARGs_OAP/bin/bbmap/bbsplit.sh -> build/lib/ARGs_OAP/bin/bbmap 2021-12-19T06:12:34,291 copying ARGs_OAP/bin/bbmap/filterbycoverage.sh -> build/lib/ARGs_OAP/bin/bbmap 2021-12-19T06:12:34,298 copying ARGs_OAP/bin/bbmap/filterbyname.sh -> build/lib/ARGs_OAP/bin/bbmap 2021-12-19T06:12:34,305 copying ARGs_OAP/bin/bbmap/fuse.sh -> build/lib/ARGs_OAP/bin/bbmap 2021-12-19T06:12:34,310 copying ARGs_OAP/bin/bbmap/testformat.sh -> build/lib/ARGs_OAP/bin/bbmap 2021-12-19T06:12:34,314 copying ARGs_OAP/bin/bbmap/bbstats.sh -> build/lib/ARGs_OAP/bin/bbmap 2021-12-19T06:12:34,319 copying ARGs_OAP/bin/bbmap/rqcfilter.sh -> build/lib/ARGs_OAP/bin/bbmap 2021-12-19T06:12:34,324 copying ARGs_OAP/bin/bbmap/khist.sh -> build/lib/ARGs_OAP/bin/bbmap 2021-12-19T06:12:34,330 copying ARGs_OAP/bin/bbmap/demuxbyname.sh -> build/lib/ARGs_OAP/bin/bbmap 2021-12-19T06:12:34,338 copying ARGs_OAP/bin/bbmap/mergesorted.sh -> build/lib/ARGs_OAP/bin/bbmap 2021-12-19T06:12:34,345 copying ARGs_OAP/bin/bbmap/samtoroc.sh -> build/lib/ARGs_OAP/bin/bbmap 2021-12-19T06:12:34,350 copying ARGs_OAP/bin/bbmap/bbmerge-auto.sh -> build/lib/ARGs_OAP/bin/bbmap 2021-12-19T06:12:34,355 copying ARGs_OAP/bin/bbmap/filterqc.sh -> build/lib/ARGs_OAP/bin/bbmap 2021-12-19T06:12:34,360 copying ARGs_OAP/bin/bbmap/stats.sh -> build/lib/ARGs_OAP/bin/bbmap 2021-12-19T06:12:34,365 copying ARGs_OAP/bin/bbmap/kapastats.sh -> build/lib/ARGs_OAP/bin/bbmap 2021-12-19T06:12:34,372 copying ARGs_OAP/bin/bbmap/bbrealign.sh -> build/lib/ARGs_OAP/bin/bbmap 2021-12-19T06:12:34,379 copying ARGs_OAP/bin/bbmap/fixgaps.sh -> build/lib/ARGs_OAP/bin/bbmap 2021-12-19T06:12:34,386 copying ARGs_OAP/bin/bbmap/license.txt -> build/lib/ARGs_OAP/bin/bbmap 2021-12-19T06:12:34,391 copying ARGs_OAP/bin/bbmap/filterbytile.sh -> build/lib/ARGs_OAP/bin/bbmap 2021-12-19T06:12:34,396 copying ARGs_OAP/bin/bbmap/tadpole.sh -> build/lib/ARGs_OAP/bin/bbmap 2021-12-19T06:12:34,403 copying ARGs_OAP/bin/bbmap/gbff2gff.sh -> build/lib/ARGs_OAP/bin/bbmap 2021-12-19T06:12:34,409 copying ARGs_OAP/bin/bbmap/splitsam4way.sh -> build/lib/ARGs_OAP/bin/bbmap 2021-12-19T06:12:34,415 copying ARGs_OAP/bin/bbmap/adjusthomopolymers.sh -> build/lib/ARGs_OAP/bin/bbmap 2021-12-19T06:12:34,422 copying ARGs_OAP/bin/bbmap/processspeed.sh -> build/lib/ARGs_OAP/bin/bbmap 2021-12-19T06:12:34,428 copying ARGs_OAP/bin/bbmap/summarizecoverage.sh -> build/lib/ARGs_OAP/bin/bbmap 2021-12-19T06:12:34,433 copying ARGs_OAP/bin/bbmap/makepolymers.sh -> build/lib/ARGs_OAP/bin/bbmap 2021-12-19T06:12:34,438 copying ARGs_OAP/bin/bbmap/bbcms.sh -> build/lib/ARGs_OAP/bin/bbmap 2021-12-19T06:12:34,444 copying ARGs_OAP/bin/bbmap/callvariants2.sh -> build/lib/ARGs_OAP/bin/bbmap 2021-12-19T06:12:34,450 copying ARGs_OAP/bin/bbmap/alltoall.sh -> build/lib/ARGs_OAP/bin/bbmap 2021-12-19T06:12:34,457 copying ARGs_OAP/bin/bbmap/icecreamgrader.sh -> build/lib/ARGs_OAP/bin/bbmap 2021-12-19T06:12:34,464 copying ARGs_OAP/bin/bbmap/removesmartbell.sh -> build/lib/ARGs_OAP/bin/bbmap 2021-12-19T06:12:34,470 copying ARGs_OAP/bin/bbmap/mutate.sh -> build/lib/ARGs_OAP/bin/bbmap 2021-12-19T06:12:34,475 copying ARGs_OAP/bin/bbmap/unzip.sh -> build/lib/ARGs_OAP/bin/bbmap 2021-12-19T06:12:34,480 copying ARGs_OAP/bin/bbmap/keepbestcopy.sh -> build/lib/ARGs_OAP/bin/bbmap 2021-12-19T06:12:34,485 copying ARGs_OAP/bin/bbmap/statswrapper.sh -> build/lib/ARGs_OAP/bin/bbmap 2021-12-19T06:12:34,491 copying ARGs_OAP/bin/bbmap/idtree.sh -> build/lib/ARGs_OAP/bin/bbmap 2021-12-19T06:12:34,498 copying ARGs_OAP/bin/bbmap/icecreamfinder.sh -> build/lib/ARGs_OAP/bin/bbmap 2021-12-19T06:12:34,505 copying ARGs_OAP/bin/bbmap/comparessu.sh -> build/lib/ARGs_OAP/bin/bbmap 2021-12-19T06:12:34,511 copying ARGs_OAP/bin/bbmap/unicode2ascii.sh -> build/lib/ARGs_OAP/bin/bbmap 2021-12-19T06:12:34,516 copying ARGs_OAP/bin/bbmap/dedupe.sh -> build/lib/ARGs_OAP/bin/bbmap 2021-12-19T06:12:34,522 copying ARGs_OAP/bin/bbmap/removehuman2.sh -> build/lib/ARGs_OAP/bin/bbmap 2021-12-19T06:12:34,527 copying ARGs_OAP/bin/bbmap/filtersilva.sh -> build/lib/ARGs_OAP/bin/bbmap 2021-12-19T06:12:34,533 copying ARGs_OAP/bin/bbmap/consensus.sh -> build/lib/ARGs_OAP/bin/bbmap 2021-12-19T06:12:34,540 copying ARGs_OAP/bin/bbmap/analyzegenes.sh -> build/lib/ARGs_OAP/bin/bbmap 2021-12-19T06:12:34,547 copying ARGs_OAP/bin/bbmap/icecreammaker.sh -> build/lib/ARGs_OAP/bin/bbmap 2021-12-19T06:12:34,552 copying ARGs_OAP/bin/bbmap/crosscontaminate.sh -> build/lib/ARGs_OAP/bin/bbmap 2021-12-19T06:12:34,557 copying ARGs_OAP/bin/bbmap/splitribo.sh -> build/lib/ARGs_OAP/bin/bbmap 2021-12-19T06:12:34,563 copying ARGs_OAP/bin/bbmap/msa.sh -> build/lib/ARGs_OAP/bin/bbmap 2021-12-19T06:12:34,568 copying ARGs_OAP/bin/bbmap/calcmem.sh -> build/lib/ARGs_OAP/bin/bbmap 2021-12-19T06:12:34,575 copying ARGs_OAP/bin/bbmap/summarizecrossblock.sh -> build/lib/ARGs_OAP/bin/bbmap 2021-12-19T06:12:34,582 copying ARGs_OAP/bin/bbmap/callvariants.sh -> build/lib/ARGs_OAP/bin/bbmap 2021-12-19T06:12:34,590 copying ARGs_OAP/bin/bbmap/filtersam.sh -> build/lib/ARGs_OAP/bin/bbmap 2021-12-19T06:12:34,595 copying ARGs_OAP/bin/bbmap/comparesketch.sh -> build/lib/ARGs_OAP/bin/bbmap 2021-12-19T06:12:34,601 copying ARGs_OAP/bin/bbmap/reducesilva.sh -> build/lib/ARGs_OAP/bin/bbmap 2021-12-19T06:12:34,606 copying ARGs_OAP/bin/bbmap/gi2taxid.sh -> build/lib/ARGs_OAP/bin/bbmap 2021-12-19T06:12:34,612 copying ARGs_OAP/bin/bbmap/gitable.sh -> build/lib/ARGs_OAP/bin/bbmap 2021-12-19T06:12:34,619 copying ARGs_OAP/bin/bbmap/taxtree.sh -> build/lib/ARGs_OAP/bin/bbmap 2021-12-19T06:12:34,626 copying ARGs_OAP/bin/bbmap/randomgenome.sh -> build/lib/ARGs_OAP/bin/bbmap 2021-12-19T06:12:34,631 copying ARGs_OAP/bin/bbmap/replaceheaders.sh -> build/lib/ARGs_OAP/bin/bbmap 2021-12-19T06:12:34,636 copying ARGs_OAP/bin/bbmap/readqc.sh -> build/lib/ARGs_OAP/bin/bbmap 2021-12-19T06:12:34,641 copying ARGs_OAP/bin/bbmap/dedupe2.sh -> build/lib/ARGs_OAP/bin/bbmap 2021-12-19T06:12:34,647 copying ARGs_OAP/bin/bbmap/analyzeaccession.sh -> build/lib/ARGs_OAP/bin/bbmap 2021-12-19T06:12:34,652 copying ARGs_OAP/bin/bbmap/rename.sh -> build/lib/ARGs_OAP/bin/bbmap 2021-12-19T06:12:34,659 copying ARGs_OAP/bin/bbmap/grademerge.sh -> build/lib/ARGs_OAP/bin/bbmap 2021-12-19T06:12:34,665 copying ARGs_OAP/bin/bbmap/sketchblacklist2.sh -> build/lib/ARGs_OAP/bin/bbmap 2021-12-19T06:12:34,672 copying ARGs_OAP/bin/bbmap/summarizecontam.sh -> build/lib/ARGs_OAP/bin/bbmap 2021-12-19T06:12:34,677 copying ARGs_OAP/bin/bbmap/mergepgm.sh -> build/lib/ARGs_OAP/bin/bbmap 2021-12-19T06:12:34,682 copying ARGs_OAP/bin/bbmap/synthmda.sh -> build/lib/ARGs_OAP/bin/bbmap 2021-12-19T06:12:34,687 copying ARGs_OAP/bin/bbmap/commonkmers.sh -> build/lib/ARGs_OAP/bin/bbmap 2021-12-19T06:12:34,692 copying ARGs_OAP/bin/bbmap/phylip2fasta.sh -> build/lib/ARGs_OAP/bin/bbmap 2021-12-19T06:12:34,698 copying ARGs_OAP/bin/bbmap/summarizemerge.sh -> build/lib/ARGs_OAP/bin/bbmap 2021-12-19T06:12:34,705 copying ARGs_OAP/bin/bbmap/splitsam6way.sh -> build/lib/ARGs_OAP/bin/bbmap 2021-12-19T06:12:34,711 copying ARGs_OAP/bin/bbmap/webcheck.sh -> build/lib/ARGs_OAP/bin/bbmap 2021-12-19T06:12:34,716 copying ARGs_OAP/bin/bbmap/taxonomy.sh -> build/lib/ARGs_OAP/bin/bbmap 2021-12-19T06:12:34,721 copying ARGs_OAP/bin/bbmap/bbmapskimmer.sh -> build/lib/ARGs_OAP/bin/bbmap 2021-12-19T06:12:34,726 copying ARGs_OAP/bin/bbmap/removemicrobes.sh -> build/lib/ARGs_OAP/bin/bbmap 2021-12-19T06:12:34,731 copying ARGs_OAP/bin/bbmap/bbsketch.sh -> build/lib/ARGs_OAP/bin/bbmap 2021-12-19T06:12:34,737 copying ARGs_OAP/bin/bbmap/sendsketch.sh -> build/lib/ARGs_OAP/bin/bbmap 2021-12-19T06:12:34,745 copying ARGs_OAP/bin/bbmap/filterlines.sh -> build/lib/ARGs_OAP/bin/bbmap 2021-12-19T06:12:34,752 copying ARGs_OAP/bin/bbmap/muxbyname.sh -> build/lib/ARGs_OAP/bin/bbmap 2021-12-19T06:12:34,757 copying ARGs_OAP/bin/bbmap/makecontaminatedgenomes.sh -> build/lib/ARGs_OAP/bin/bbmap 2021-12-19T06:12:34,762 copying ARGs_OAP/bin/bbmap/getreads.sh -> build/lib/ARGs_OAP/bin/bbmap 2021-12-19T06:12:34,766 copying ARGs_OAP/bin/bbmap/loadreads.sh -> build/lib/ARGs_OAP/bin/bbmap 2021-12-19T06:12:34,771 copying ARGs_OAP/bin/bbmap/mergesam.sh -> build/lib/ARGs_OAP/bin/bbmap 2021-12-19T06:12:34,777 copying ARGs_OAP/bin/bbmap/translate6frames.sh -> build/lib/ARGs_OAP/bin/bbmap 2021-12-19T06:12:34,784 copying ARGs_OAP/bin/bbmap/shred.sh -> build/lib/ARGs_OAP/bin/bbmap 2021-12-19T06:12:34,791 copying ARGs_OAP/bin/bbmap/bbmask.sh -> build/lib/ARGs_OAP/bin/bbmap 2021-12-19T06:12:34,797 copying ARGs_OAP/bin/bbmap/tetramerfreq.sh -> build/lib/ARGs_OAP/bin/bbmap 2021-12-19T06:12:34,802 copying ARGs_OAP/bin/bbmap/summarizequast.sh -> build/lib/ARGs_OAP/bin/bbmap 2021-12-19T06:12:34,806 copying ARGs_OAP/bin/bbmap/matrixtocolumns.sh -> build/lib/ARGs_OAP/bin/bbmap 2021-12-19T06:12:34,811 copying ARGs_OAP/bin/bbmap/testfilesystem.sh -> build/lib/ARGs_OAP/bin/bbmap 2021-12-19T06:12:34,817 copying ARGs_OAP/bin/bbmap/filtersubs.sh -> build/lib/ARGs_OAP/bin/bbmap 2021-12-19T06:12:34,823 copying ARGs_OAP/bin/bbmap/rqcfilter2.sh -> build/lib/ARGs_OAP/bin/bbmap 2021-12-19T06:12:34,832 copying ARGs_OAP/bin/bbmap/comparegff.sh -> build/lib/ARGs_OAP/bin/bbmap 2021-12-19T06:12:34,837 copying ARGs_OAP/bin/bbmap/estherfilter.sh -> build/lib/ARGs_OAP/bin/bbmap 2021-12-19T06:12:34,842 copying ARGs_OAP/bin/bbmap/cutgff.sh -> build/lib/ARGs_OAP/bin/bbmap 2021-12-19T06:12:34,847 copying ARGs_OAP/bin/bbmap/bbcountunique.sh -> build/lib/ARGs_OAP/bin/bbmap 2021-12-19T06:12:34,852 copying ARGs_OAP/bin/bbmap/taxserver.sh -> build/lib/ARGs_OAP/bin/bbmap 2021-12-19T06:12:34,858 copying ARGs_OAP/bin/bbmap/repair.sh -> build/lib/ARGs_OAP/bin/bbmap 2021-12-19T06:12:34,865 copying ARGs_OAP/bin/bbmap/addssu.sh -> build/lib/ARGs_OAP/bin/bbmap 2021-12-19T06:12:34,871 copying ARGs_OAP/bin/bbmap/explodetree.sh -> build/lib/ARGs_OAP/bin/bbmap 2021-12-19T06:12:34,878 copying ARGs_OAP/bin/bbmap/countbarcodes.sh -> build/lib/ARGs_OAP/bin/bbmap 2021-12-19T06:12:34,883 copying ARGs_OAP/bin/bbmap/gi2ancestors.sh -> build/lib/ARGs_OAP/bin/bbmap 2021-12-19T06:12:34,887 copying ARGs_OAP/bin/bbmap/mapPacBio.sh -> build/lib/ARGs_OAP/bin/bbmap 2021-12-19T06:12:34,892 copying ARGs_OAP/bin/bbmap/reformat.sh -> build/lib/ARGs_OAP/bin/bbmap 2021-12-19T06:12:34,900 copying ARGs_OAP/bin/bbmap/countgc.sh -> build/lib/ARGs_OAP/bin/bbmap 2021-12-19T06:12:34,906 copying ARGs_OAP/bin/bbmap/representative.sh -> build/lib/ARGs_OAP/bin/bbmap 2021-12-19T06:12:34,913 copying ARGs_OAP/bin/bbmap/kmercountmulti.sh -> build/lib/ARGs_OAP/bin/bbmap 2021-12-19T06:12:34,919 copying ARGs_OAP/bin/bbmap/clumpify.sh -> build/lib/ARGs_OAP/bin/bbmap 2021-12-19T06:12:34,925 copying ARGs_OAP/bin/bbmap/filterbysequence.sh -> build/lib/ARGs_OAP/bin/bbmap 2021-12-19T06:12:34,930 copying ARGs_OAP/bin/bbmap/streamsam.sh -> build/lib/ARGs_OAP/bin/bbmap 2021-12-19T06:12:34,935 copying ARGs_OAP/bin/bbmap/summarizescafstats.sh -> build/lib/ARGs_OAP/bin/bbmap 2021-12-19T06:12:34,941 copying ARGs_OAP/bin/bbmap/consect.sh -> build/lib/ARGs_OAP/bin/bbmap 2021-12-19T06:12:34,948 copying ARGs_OAP/bin/bbmap/kmercoverage.sh -> build/lib/ARGs_OAP/bin/bbmap 2021-12-19T06:12:34,955 copying ARGs_OAP/bin/bbmap/bbduk.sh -> build/lib/ARGs_OAP/bin/bbmap 2021-12-19T06:12:34,963 copying ARGs_OAP/bin/bbmap/shuffle2.sh -> build/lib/ARGs_OAP/bin/bbmap 2021-12-19T06:12:34,968 copying ARGs_OAP/bin/bbmap/fetchproks.sh -> build/lib/ARGs_OAP/bin/bbmap 2021-12-19T06:12:34,973 copying ARGs_OAP/bin/bbmap/mergebarcodes.sh -> build/lib/ARGs_OAP/bin/bbmap 2021-12-19T06:12:34,978 copying ARGs_OAP/bin/bbmap/tadpipe.sh -> build/lib/ARGs_OAP/bin/bbmap 2021-12-19T06:12:34,985 copying ARGs_OAP/bin/bbmap/dedupebymapping.sh -> build/lib/ARGs_OAP/bin/bbmap 2021-12-19T06:12:34,991 copying ARGs_OAP/bin/bbmap/kcompress.sh -> build/lib/ARGs_OAP/bin/bbmap 2021-12-19T06:12:34,998 copying ARGs_OAP/bin/bbmap/processhi-c.sh -> build/lib/ARGs_OAP/bin/bbmap 2021-12-19T06:12:35,003 copying ARGs_OAP/bin/bbmap/a_sample_mt.sh -> build/lib/ARGs_OAP/bin/bbmap 2021-12-19T06:12:35,008 copying ARGs_OAP/bin/bbmap/decontaminate.sh -> build/lib/ARGs_OAP/bin/bbmap 2021-12-19T06:12:35,014 copying ARGs_OAP/bin/bbmap/taxsize.sh -> build/lib/ARGs_OAP/bin/bbmap 2021-12-19T06:12:35,020 copying ARGs_OAP/bin/bbmap/mergesketch.sh -> build/lib/ARGs_OAP/bin/bbmap 2021-12-19T06:12:35,027 copying ARGs_OAP/bin/bbmap/cutprimers.sh -> build/lib/ARGs_OAP/bin/bbmap 2021-12-19T06:12:35,034 copying ARGs_OAP/bin/bbmap/bbrename.sh -> build/lib/ARGs_OAP/bin/bbmap 2021-12-19T06:12:35,050 installing to build/bdist.linux-armv7l/wheel 2021-12-19T06:12:35,051 running install 2021-12-19T06:12:35,053 running install_lib 2021-12-19T06:12:35,060 creating build/bdist.linux-armv7l 2021-12-19T06:12:35,061 creating build/bdist.linux-armv7l/wheel 2021-12-19T06:12:35,065 creating build/bdist.linux-armv7l/wheel/ARGs_OAP 2021-12-19T06:12:35,067 copying build/lib/ARGs_OAP/stage_one.py -> build/bdist.linux-armv7l/wheel/ARGs_OAP 2021-12-19T06:12:35,071 copying build/lib/ARGs_OAP/README.md -> build/bdist.linux-armv7l/wheel/ARGs_OAP 2021-12-19T06:12:35,076 copying build/lib/ARGs_OAP/argoap_pipeline_stageone_version2.3 -> build/bdist.linux-armv7l/wheel/ARGs_OAP 2021-12-19T06:12:35,082 copying build/lib/ARGs_OAP/argoap_pipeline_stageone_version2 -> build/bdist.linux-armv7l/wheel/ARGs_OAP 2021-12-19T06:12:35,089 copying build/lib/ARGs_OAP/index.rst -> build/bdist.linux-armv7l/wheel/ARGs_OAP 2021-12-19T06:12:35,096 copying build/lib/ARGs_OAP/argoap_pipeline_stagetwo_version2 -> build/bdist.linux-armv7l/wheel/ARGs_OAP 2021-12-19T06:12:35,102 copying build/lib/ARGs_OAP/__init__.py -> build/bdist.linux-armv7l/wheel/ARGs_OAP 2021-12-19T06:12:35,107 creating build/bdist.linux-armv7l/wheel/ARGs_OAP/DB 2021-12-19T06:12:35,109 copying build/lib/ARGs_OAP/DB/gg85.fasta -> build/bdist.linux-armv7l/wheel/ARGs_OAP/DB 2021-12-19T06:12:35,791 copying build/lib/ARGs_OAP/DB/SARG.2.2.diamondv0.9.24.dmnd -> build/bdist.linux-armv7l/wheel/ARGs_OAP/DB 2021-12-19T06:12:37,129 copying build/lib/ARGs_OAP/DB/update_45_sarg2.0_16s.table_201704.txt -> build/bdist.linux-armv7l/wheel/ARGs_OAP/DB 2021-12-19T06:12:37,154 copying build/lib/ARGs_OAP/DB/all_KO30_name.list -> build/bdist.linux-armv7l/wheel/ARGs_OAP/DB 2021-12-19T06:12:37,217 copying build/lib/ARGs_OAP/DB/SARG.2.2.fasta.psq -> build/bdist.linux-armv7l/wheel/ARGs_OAP/DB 2021-12-19T06:12:37,699 copying build/lib/ARGs_OAP/DB/KO30_DIAMOND.dmnd -> build/bdist.linux-armv7l/wheel/ARGs_OAP/DB 2021-12-19T06:12:38,303 copying build/lib/ARGs_OAP/DB/update_45_sarg2.0_cell.table_201704.txt -> build/bdist.linux-armv7l/wheel/ARGs_OAP/DB 2021-12-19T06:12:38,329 copying build/lib/ARGs_OAP/DB/gg85_yinxiaole.fasta.mmi -> build/bdist.linux-armv7l/wheel/ARGs_OAP/DB 2021-12-19T06:12:40,102 copying build/lib/ARGs_OAP/DB/SARG.2.2.fasta.pin -> build/bdist.linux-armv7l/wheel/ARGs_OAP/DB 2021-12-19T06:12:40,116 copying build/lib/ARGs_OAP/DB/structure_20181107.LIST -> build/bdist.linux-armv7l/wheel/ARGs_OAP/DB 2021-12-19T06:12:40,159 copying build/lib/ARGs_OAP/DB/SARG.2.2.fasta -> build/bdist.linux-armv7l/wheel/ARGs_OAP/DB 2021-12-19T06:12:41,483 copying build/lib/ARGs_OAP/DB/SARG.2.2.fasta.phr -> build/bdist.linux-armv7l/wheel/ARGs_OAP/DB 2021-12-19T06:12:42,397 copying build/lib/ARGs_OAP/ARGs_OAP.py -> build/bdist.linux-armv7l/wheel/ARGs_OAP 2021-12-19T06:12:42,404 creating build/bdist.linux-armv7l/wheel/ARGs_OAP/bin 2021-12-19T06:12:42,406 copying build/lib/ARGs_OAP/bin/copy_correction.pl -> build/bdist.linux-armv7l/wheel/ARGs_OAP/bin 2021-12-19T06:12:42,410 copying build/lib/ARGs_OAP/bin/fastp -> build/bdist.linux-armv7l/wheel/ARGs_OAP/bin 2021-12-19T06:12:43,119 copying build/lib/ARGs_OAP/bin/de-replicate.pl -> build/bdist.linux-armv7l/wheel/ARGs_OAP/bin 2021-12-19T06:12:43,125 copying build/lib/ARGs_OAP/bin/minimap2 -> build/bdist.linux-armv7l/wheel/ARGs_OAP/bin 2021-12-19T06:12:43,236 copying build/lib/ARGs_OAP/bin/Fq2fa.pl -> build/bdist.linux-armv7l/wheel/ARGs_OAP/bin 2021-12-19T06:12:43,241 copying build/lib/ARGs_OAP/bin/extract_usearch_reads.pl -> build/bdist.linux-armv7l/wheel/ARGs_OAP/bin 2021-12-19T06:12:43,247 copying build/lib/ARGs_OAP/bin/diamond -> build/bdist.linux-armv7l/wheel/ARGs_OAP/bin 2021-12-19T06:12:43,334 copying build/lib/ARGs_OAP/bin/obtain_community.pl -> build/bdist.linux-armv7l/wheel/ARGs_OAP/bin 2021-12-19T06:12:43,339 copying build/lib/ARGs_OAP/bin/diamondv0.9.24 -> build/bdist.linux-armv7l/wheel/ARGs_OAP/bin 2021-12-19T06:12:43,983 copying build/lib/ARGs_OAP/bin/blastx -> build/bdist.linux-armv7l/wheel/ARGs_OAP/bin 2021-12-19T06:12:46,410 copying build/lib/ARGs_OAP/bin/merge_extracted_fa_update_metadate.v2.3.pl -> build/bdist.linux-armv7l/wheel/ARGs_OAP/bin 2021-12-19T06:12:46,425 creating build/bdist.linux-armv7l/wheel/ARGs_OAP/bin/bbmap 2021-12-19T06:12:46,426 copying build/lib/ARGs_OAP/bin/bbmap/mergeOTUs.sh -> build/bdist.linux-armv7l/wheel/ARGs_OAP/bin/bbmap 2021-12-19T06:12:46,431 copying build/lib/ARGs_OAP/bin/bbmap/summarizesketch.sh -> build/bdist.linux-armv7l/wheel/ARGs_OAP/bin/bbmap 2021-12-19T06:12:46,436 copying build/lib/ARGs_OAP/bin/bbmap/removecatdogmousehuman.sh -> build/bdist.linux-armv7l/wheel/ARGs_OAP/bin/bbmap 2021-12-19T06:12:46,442 copying build/lib/ARGs_OAP/bin/bbmap/splitsam.sh -> build/bdist.linux-armv7l/wheel/ARGs_OAP/bin/bbmap 2021-12-19T06:12:46,447 copying build/lib/ARGs_OAP/bin/bbmap/summarizeseal.sh -> build/bdist.linux-armv7l/wheel/ARGs_OAP/bin/bbmap 2021-12-19T06:12:46,453 copying build/lib/ARGs_OAP/bin/bbmap/comparevcf.sh -> build/bdist.linux-armv7l/wheel/ARGs_OAP/bin/bbmap 2021-12-19T06:12:46,458 copying build/lib/ARGs_OAP/bin/bbmap/kmercountexact.sh -> build/bdist.linux-armv7l/wheel/ARGs_OAP/bin/bbmap 2021-12-19T06:12:46,462 copying build/lib/ARGs_OAP/bin/bbmap/bbest.sh -> build/bdist.linux-armv7l/wheel/ARGs_OAP/bin/bbmap 2021-12-19T06:12:46,467 copying build/lib/ARGs_OAP/bin/bbmap/sketch.sh -> build/bdist.linux-armv7l/wheel/ARGs_OAP/bin/bbmap 2021-12-19T06:12:46,472 copying build/lib/ARGs_OAP/bin/bbmap/readlength.sh -> build/bdist.linux-armv7l/wheel/ARGs_OAP/bin/bbmap 2021-12-19T06:12:46,477 copying build/lib/ARGs_OAP/bin/bbmap/README.md -> build/bdist.linux-armv7l/wheel/ARGs_OAP/bin/bbmap 2021-12-19T06:12:46,482 copying build/lib/ARGs_OAP/bin/bbmap/loglog.sh -> build/bdist.linux-armv7l/wheel/ARGs_OAP/bin/bbmap 2021-12-19T06:12:46,488 copying build/lib/ARGs_OAP/bin/bbmap/bbversion.sh -> build/bdist.linux-armv7l/wheel/ARGs_OAP/bin/bbmap 2021-12-19T06:12:46,493 copying build/lib/ARGs_OAP/bin/bbmap/printtime.sh -> build/bdist.linux-armv7l/wheel/ARGs_OAP/bin/bbmap 2021-12-19T06:12:46,499 copying build/lib/ARGs_OAP/bin/bbmap/kmerfilterset.sh -> build/bdist.linux-armv7l/wheel/ARGs_OAP/bin/bbmap 2021-12-19T06:12:46,504 copying build/lib/ARGs_OAP/bin/bbmap/testformat2.sh -> build/bdist.linux-armv7l/wheel/ARGs_OAP/bin/bbmap 2021-12-19T06:12:46,511 copying build/lib/ARGs_OAP/bin/bbmap/gradesam.sh -> build/bdist.linux-armv7l/wheel/ARGs_OAP/bin/bbmap 2021-12-19T06:12:46,516 copying build/lib/ARGs_OAP/bin/bbmap/plotgc.sh -> build/bdist.linux-armv7l/wheel/ARGs_OAP/bin/bbmap 2021-12-19T06:12:46,522 copying build/lib/ARGs_OAP/bin/bbmap/bbfakereads.sh -> build/bdist.linux-armv7l/wheel/ARGs_OAP/bin/bbmap 2021-12-19T06:12:46,527 copying build/lib/ARGs_OAP/bin/bbmap/filterbytaxa.sh -> build/bdist.linux-armv7l/wheel/ARGs_OAP/bin/bbmap 2021-12-19T06:12:46,533 copying build/lib/ARGs_OAP/bin/bbmap/seal.sh -> build/bdist.linux-armv7l/wheel/ARGs_OAP/bin/bbmap 2021-12-19T06:12:46,540 copying build/lib/ARGs_OAP/bin/bbmap/lilypad.sh -> build/bdist.linux-armv7l/wheel/ARGs_OAP/bin/bbmap 2021-12-19T06:12:46,546 copying build/lib/ARGs_OAP/bin/bbmap/partition.sh -> build/bdist.linux-armv7l/wheel/ARGs_OAP/bin/bbmap 2021-12-19T06:12:46,551 copying build/lib/ARGs_OAP/bin/bbmap/processfrag.sh -> build/bdist.linux-armv7l/wheel/ARGs_OAP/bin/bbmap 2021-12-19T06:12:46,557 copying build/lib/ARGs_OAP/bin/bbmap/fungalrelease.sh -> build/bdist.linux-armv7l/wheel/ARGs_OAP/bin/bbmap 2021-12-19T06:12:46,563 copying build/lib/ARGs_OAP/bin/bbmap/mergeribo.sh -> build/bdist.linux-armv7l/wheel/ARGs_OAP/bin/bbmap 2021-12-19T06:12:46,569 copying build/lib/ARGs_OAP/bin/bbmap/removehuman.sh -> build/bdist.linux-armv7l/wheel/ARGs_OAP/bin/bbmap 2021-12-19T06:12:46,574 copying build/lib/ARGs_OAP/bin/bbmap/addadapters.sh -> build/bdist.linux-armv7l/wheel/ARGs_OAP/bin/bbmap 2021-12-19T06:12:46,580 copying build/lib/ARGs_OAP/bin/bbmap/countsharedlines.sh -> build/bdist.linux-armv7l/wheel/ARGs_OAP/bin/bbmap 2021-12-19T06:12:46,586 copying build/lib/ARGs_OAP/bin/bbmap/callgenes.sh -> build/bdist.linux-armv7l/wheel/ARGs_OAP/bin/bbmap 2021-12-19T06:12:46,591 copying build/lib/ARGs_OAP/bin/bbmap/textfile.sh -> build/bdist.linux-armv7l/wheel/ARGs_OAP/bin/bbmap 2021-12-19T06:12:46,597 copying build/lib/ARGs_OAP/bin/bbmap/removebadbarcodes.sh -> build/bdist.linux-armv7l/wheel/ARGs_OAP/bin/bbmap 2021-12-19T06:12:46,603 copying build/lib/ARGs_OAP/bin/bbmap/sortbyname.sh -> build/bdist.linux-armv7l/wheel/ARGs_OAP/bin/bbmap 2021-12-19T06:12:46,608 copying build/lib/ARGs_OAP/bin/bbmap/invertkey.sh -> build/bdist.linux-armv7l/wheel/ARGs_OAP/bin/bbmap 2021-12-19T06:12:46,614 copying build/lib/ARGs_OAP/bin/bbmap/filterassemblysummary.sh -> build/bdist.linux-armv7l/wheel/ARGs_OAP/bin/bbmap 2021-12-19T06:12:46,620 copying build/lib/ARGs_OAP/bin/bbmap/splitnextera.sh -> build/bdist.linux-armv7l/wheel/ARGs_OAP/bin/bbmap 2021-12-19T06:12:46,626 copying build/lib/ARGs_OAP/bin/bbmap/shrinkaccession.sh -> build/bdist.linux-armv7l/wheel/ARGs_OAP/bin/bbmap 2021-12-19T06:12:46,631 copying build/lib/ARGs_OAP/bin/bbmap/bbmerge.sh -> build/bdist.linux-armv7l/wheel/ARGs_OAP/bin/bbmap 2021-12-19T06:12:46,638 copying build/lib/ARGs_OAP/bin/bbmap/diskbench.sh -> build/bdist.linux-armv7l/wheel/ARGs_OAP/bin/bbmap 2021-12-19T06:12:46,644 copying build/lib/ARGs_OAP/bin/bbmap/idmatrix.sh -> build/bdist.linux-armv7l/wheel/ARGs_OAP/bin/bbmap 2021-12-19T06:12:46,649 copying build/lib/ARGs_OAP/bin/bbmap/sketchblacklist.sh -> build/bdist.linux-armv7l/wheel/ARGs_OAP/bin/bbmap 2021-12-19T06:12:46,655 copying build/lib/ARGs_OAP/bin/bbmap/applyvariants.sh -> build/bdist.linux-armv7l/wheel/ARGs_OAP/bin/bbmap 2021-12-19T06:12:46,660 copying build/lib/ARGs_OAP/bin/bbmap/pileup.sh -> build/bdist.linux-armv7l/wheel/ARGs_OAP/bin/bbmap 2021-12-19T06:12:46,668 copying build/lib/ARGs_OAP/bin/bbmap/bbsplitpairs.sh -> build/bdist.linux-armv7l/wheel/ARGs_OAP/bin/bbmap 2021-12-19T06:12:46,674 copying build/lib/ARGs_OAP/bin/bbmap/callpeaks.sh -> build/bdist.linux-armv7l/wheel/ARGs_OAP/bin/bbmap 2021-12-19T06:12:46,680 copying build/lib/ARGs_OAP/bin/bbmap/splitbytaxa.sh -> build/bdist.linux-armv7l/wheel/ARGs_OAP/bin/bbmap 2021-12-19T06:12:46,686 copying build/lib/ARGs_OAP/bin/bbmap/kmerlimit.sh -> build/bdist.linux-armv7l/wheel/ARGs_OAP/bin/bbmap 2021-12-19T06:12:46,692 copying build/lib/ARGs_OAP/bin/bbmap/crossblock.sh -> build/bdist.linux-armv7l/wheel/ARGs_OAP/bin/bbmap 2021-12-19T06:12:46,697 copying build/lib/ARGs_OAP/bin/bbmap/filterbarcodes.sh -> build/bdist.linux-armv7l/wheel/ARGs_OAP/bin/bbmap 2021-12-19T06:12:46,703 copying build/lib/ARGs_OAP/bin/bbmap/makechimeras.sh -> build/bdist.linux-armv7l/wheel/ARGs_OAP/bin/bbmap 2021-12-19T06:12:46,708 copying build/lib/ARGs_OAP/bin/bbmap/shuffle.sh -> build/bdist.linux-armv7l/wheel/ARGs_OAP/bin/bbmap 2021-12-19T06:12:46,714 copying build/lib/ARGs_OAP/bin/bbmap/analyzesketchresults.sh -> build/bdist.linux-armv7l/wheel/ARGs_OAP/bin/bbmap 2021-12-19T06:12:46,720 copying build/lib/ARGs_OAP/bin/bbmap/vcf2gff.sh -> build/bdist.linux-armv7l/wheel/ARGs_OAP/bin/bbmap 2021-12-19T06:12:46,725 copying build/lib/ARGs_OAP/bin/bbmap/bbmap.sh -> build/bdist.linux-armv7l/wheel/ARGs_OAP/bin/bbmap 2021-12-19T06:12:46,733 copying build/lib/ARGs_OAP/bin/bbmap/randomreads.sh -> build/bdist.linux-armv7l/wheel/ARGs_OAP/bin/bbmap 2021-12-19T06:12:46,740 copying build/lib/ARGs_OAP/bin/bbmap/tadwrapper.sh -> build/bdist.linux-armv7l/wheel/ARGs_OAP/bin/bbmap 2021-12-19T06:12:46,746 copying build/lib/ARGs_OAP/bin/bbmap/postfilter.sh -> build/bdist.linux-armv7l/wheel/ARGs_OAP/bin/bbmap 2021-12-19T06:12:46,751 copying build/lib/ARGs_OAP/bin/bbmap/calctruequality.sh -> build/bdist.linux-armv7l/wheel/ARGs_OAP/bin/bbmap 2021-12-19T06:12:46,757 copying build/lib/ARGs_OAP/bin/bbmap/bloomfilter.sh -> build/bdist.linux-armv7l/wheel/ARGs_OAP/bin/bbmap 2021-12-19T06:12:46,763 copying build/lib/ARGs_OAP/bin/bbmap/filtervcf.sh -> build/bdist.linux-armv7l/wheel/ARGs_OAP/bin/bbmap 2021-12-19T06:12:46,769 copying build/lib/ARGs_OAP/bin/bbmap/kmerlimit2.sh -> build/bdist.linux-armv7l/wheel/ARGs_OAP/bin/bbmap 2021-12-19T06:12:46,774 copying build/lib/ARGs_OAP/bin/bbmap/subsketch.sh -> build/bdist.linux-armv7l/wheel/ARGs_OAP/bin/bbmap 2021-12-19T06:12:46,780 copying build/lib/ARGs_OAP/bin/bbmap/renameimg.sh -> build/bdist.linux-armv7l/wheel/ARGs_OAP/bin/bbmap 2021-12-19T06:12:46,785 copying build/lib/ARGs_OAP/bin/bbmap/bbwrap.sh -> build/bdist.linux-armv7l/wheel/ARGs_OAP/bin/bbmap 2021-12-19T06:12:46,791 copying build/lib/ARGs_OAP/bin/bbmap/bbnorm.sh -> build/bdist.linux-armv7l/wheel/ARGs_OAP/bin/bbmap 2021-12-19T06:12:46,798 copying build/lib/ARGs_OAP/bin/bbmap/plotflowcell.sh -> build/bdist.linux-armv7l/wheel/ARGs_OAP/bin/bbmap 2021-12-19T06:12:46,804 copying build/lib/ARGs_OAP/bin/bbmap/bbsplit.sh -> build/bdist.linux-armv7l/wheel/ARGs_OAP/bin/bbmap 2021-12-19T06:12:46,810 copying build/lib/ARGs_OAP/bin/bbmap/filterbycoverage.sh -> build/bdist.linux-armv7l/wheel/ARGs_OAP/bin/bbmap 2021-12-19T06:12:46,815 copying build/lib/ARGs_OAP/bin/bbmap/filterbyname.sh -> build/bdist.linux-armv7l/wheel/ARGs_OAP/bin/bbmap 2021-12-19T06:12:46,821 copying build/lib/ARGs_OAP/bin/bbmap/fuse.sh -> build/bdist.linux-armv7l/wheel/ARGs_OAP/bin/bbmap 2021-12-19T06:12:46,827 copying build/lib/ARGs_OAP/bin/bbmap/testformat.sh -> build/bdist.linux-armv7l/wheel/ARGs_OAP/bin/bbmap 2021-12-19T06:12:46,832 copying build/lib/ARGs_OAP/bin/bbmap/bbstats.sh -> build/bdist.linux-armv7l/wheel/ARGs_OAP/bin/bbmap 2021-12-19T06:12:46,838 copying build/lib/ARGs_OAP/bin/bbmap/rqcfilter.sh -> build/bdist.linux-armv7l/wheel/ARGs_OAP/bin/bbmap 2021-12-19T06:12:46,843 copying build/lib/ARGs_OAP/bin/bbmap/khist.sh -> build/bdist.linux-armv7l/wheel/ARGs_OAP/bin/bbmap 2021-12-19T06:12:46,849 copying build/lib/ARGs_OAP/bin/bbmap/demuxbyname.sh -> build/bdist.linux-armv7l/wheel/ARGs_OAP/bin/bbmap 2021-12-19T06:12:46,855 copying build/lib/ARGs_OAP/bin/bbmap/mergesorted.sh -> build/bdist.linux-armv7l/wheel/ARGs_OAP/bin/bbmap 2021-12-19T06:12:46,861 copying build/lib/ARGs_OAP/bin/bbmap/samtoroc.sh -> build/bdist.linux-armv7l/wheel/ARGs_OAP/bin/bbmap 2021-12-19T06:12:46,866 copying build/lib/ARGs_OAP/bin/bbmap/bbmerge-auto.sh -> build/bdist.linux-armv7l/wheel/ARGs_OAP/bin/bbmap 2021-12-19T06:12:46,872 copying build/lib/ARGs_OAP/bin/bbmap/filterqc.sh -> build/bdist.linux-armv7l/wheel/ARGs_OAP/bin/bbmap 2021-12-19T06:12:46,877 copying build/lib/ARGs_OAP/bin/bbmap/stats.sh -> build/bdist.linux-armv7l/wheel/ARGs_OAP/bin/bbmap 2021-12-19T06:12:46,883 copying build/lib/ARGs_OAP/bin/bbmap/kapastats.sh -> build/bdist.linux-armv7l/wheel/ARGs_OAP/bin/bbmap 2021-12-19T06:12:46,888 copying build/lib/ARGs_OAP/bin/bbmap/bbrealign.sh -> build/bdist.linux-armv7l/wheel/ARGs_OAP/bin/bbmap 2021-12-19T06:12:46,894 copying build/lib/ARGs_OAP/bin/bbmap/fixgaps.sh -> build/bdist.linux-armv7l/wheel/ARGs_OAP/bin/bbmap 2021-12-19T06:12:46,899 copying build/lib/ARGs_OAP/bin/bbmap/license.txt -> build/bdist.linux-armv7l/wheel/ARGs_OAP/bin/bbmap 2021-12-19T06:12:46,905 copying build/lib/ARGs_OAP/bin/bbmap/filterbytile.sh -> build/bdist.linux-armv7l/wheel/ARGs_OAP/bin/bbmap 2021-12-19T06:12:46,911 copying build/lib/ARGs_OAP/bin/bbmap/tadpole.sh -> build/bdist.linux-armv7l/wheel/ARGs_OAP/bin/bbmap 2021-12-19T06:12:46,918 copying build/lib/ARGs_OAP/bin/bbmap/gbff2gff.sh -> build/bdist.linux-armv7l/wheel/ARGs_OAP/bin/bbmap 2021-12-19T06:12:46,924 copying build/lib/ARGs_OAP/bin/bbmap/splitsam4way.sh -> build/bdist.linux-armv7l/wheel/ARGs_OAP/bin/bbmap 2021-12-19T06:12:46,929 copying build/lib/ARGs_OAP/bin/bbmap/adjusthomopolymers.sh -> build/bdist.linux-armv7l/wheel/ARGs_OAP/bin/bbmap 2021-12-19T06:12:46,935 copying build/lib/ARGs_OAP/bin/bbmap/processspeed.sh -> build/bdist.linux-armv7l/wheel/ARGs_OAP/bin/bbmap 2021-12-19T06:12:46,940 copying build/lib/ARGs_OAP/bin/bbmap/summarizecoverage.sh -> build/bdist.linux-armv7l/wheel/ARGs_OAP/bin/bbmap 2021-12-19T06:12:46,946 copying build/lib/ARGs_OAP/bin/bbmap/makepolymers.sh -> build/bdist.linux-armv7l/wheel/ARGs_OAP/bin/bbmap 2021-12-19T06:12:46,951 copying build/lib/ARGs_OAP/bin/bbmap/bbcms.sh -> build/bdist.linux-armv7l/wheel/ARGs_OAP/bin/bbmap 2021-12-19T06:12:46,957 copying build/lib/ARGs_OAP/bin/bbmap/callvariants2.sh -> build/bdist.linux-armv7l/wheel/ARGs_OAP/bin/bbmap 2021-12-19T06:12:46,963 copying build/lib/ARGs_OAP/bin/bbmap/alltoall.sh -> build/bdist.linux-armv7l/wheel/ARGs_OAP/bin/bbmap 2021-12-19T06:12:46,968 copying build/lib/ARGs_OAP/bin/bbmap/icecreamgrader.sh -> build/bdist.linux-armv7l/wheel/ARGs_OAP/bin/bbmap 2021-12-19T06:12:46,973 copying build/lib/ARGs_OAP/bin/bbmap/removesmartbell.sh -> build/bdist.linux-armv7l/wheel/ARGs_OAP/bin/bbmap 2021-12-19T06:12:46,979 copying build/lib/ARGs_OAP/bin/bbmap/mutate.sh -> build/bdist.linux-armv7l/wheel/ARGs_OAP/bin/bbmap 2021-12-19T06:12:46,984 copying build/lib/ARGs_OAP/bin/bbmap/unzip.sh -> build/bdist.linux-armv7l/wheel/ARGs_OAP/bin/bbmap 2021-12-19T06:12:46,989 copying build/lib/ARGs_OAP/bin/bbmap/keepbestcopy.sh -> build/bdist.linux-armv7l/wheel/ARGs_OAP/bin/bbmap 2021-12-19T06:12:46,995 copying build/lib/ARGs_OAP/bin/bbmap/statswrapper.sh -> build/bdist.linux-armv7l/wheel/ARGs_OAP/bin/bbmap 2021-12-19T06:12:47,000 copying build/lib/ARGs_OAP/bin/bbmap/idtree.sh -> build/bdist.linux-armv7l/wheel/ARGs_OAP/bin/bbmap 2021-12-19T06:12:47,006 copying build/lib/ARGs_OAP/bin/bbmap/icecreamfinder.sh -> build/bdist.linux-armv7l/wheel/ARGs_OAP/bin/bbmap 2021-12-19T06:12:47,012 copying build/lib/ARGs_OAP/bin/bbmap/comparessu.sh -> build/bdist.linux-armv7l/wheel/ARGs_OAP/bin/bbmap 2021-12-19T06:12:47,018 copying build/lib/ARGs_OAP/bin/bbmap/unicode2ascii.sh -> build/bdist.linux-armv7l/wheel/ARGs_OAP/bin/bbmap 2021-12-19T06:12:47,023 copying build/lib/ARGs_OAP/bin/bbmap/dedupe.sh -> build/bdist.linux-armv7l/wheel/ARGs_OAP/bin/bbmap 2021-12-19T06:12:47,030 copying build/lib/ARGs_OAP/bin/bbmap/removehuman2.sh -> build/bdist.linux-armv7l/wheel/ARGs_OAP/bin/bbmap 2021-12-19T06:12:47,035 copying build/lib/ARGs_OAP/bin/bbmap/filtersilva.sh -> build/bdist.linux-armv7l/wheel/ARGs_OAP/bin/bbmap 2021-12-19T06:12:47,040 copying build/lib/ARGs_OAP/bin/bbmap/consensus.sh -> build/bdist.linux-armv7l/wheel/ARGs_OAP/bin/bbmap 2021-12-19T06:12:47,046 copying build/lib/ARGs_OAP/bin/bbmap/analyzegenes.sh -> build/bdist.linux-armv7l/wheel/ARGs_OAP/bin/bbmap 2021-12-19T06:12:47,051 copying build/lib/ARGs_OAP/bin/bbmap/icecreammaker.sh -> build/bdist.linux-armv7l/wheel/ARGs_OAP/bin/bbmap 2021-12-19T06:12:47,057 copying build/lib/ARGs_OAP/bin/bbmap/crosscontaminate.sh -> build/bdist.linux-armv7l/wheel/ARGs_OAP/bin/bbmap 2021-12-19T06:12:47,063 copying build/lib/ARGs_OAP/bin/bbmap/splitribo.sh -> build/bdist.linux-armv7l/wheel/ARGs_OAP/bin/bbmap 2021-12-19T06:12:47,068 copying build/lib/ARGs_OAP/bin/bbmap/msa.sh -> build/bdist.linux-armv7l/wheel/ARGs_OAP/bin/bbmap 2021-12-19T06:12:47,074 copying build/lib/ARGs_OAP/bin/bbmap/calcmem.sh -> build/bdist.linux-armv7l/wheel/ARGs_OAP/bin/bbmap 2021-12-19T06:12:47,080 copying build/lib/ARGs_OAP/bin/bbmap/summarizecrossblock.sh -> build/bdist.linux-armv7l/wheel/ARGs_OAP/bin/bbmap 2021-12-19T06:12:47,085 copying build/lib/ARGs_OAP/bin/bbmap/callvariants.sh -> build/bdist.linux-armv7l/wheel/ARGs_OAP/bin/bbmap 2021-12-19T06:12:47,092 copying build/lib/ARGs_OAP/bin/bbmap/filtersam.sh -> build/bdist.linux-armv7l/wheel/ARGs_OAP/bin/bbmap 2021-12-19T06:12:47,098 copying build/lib/ARGs_OAP/bin/bbmap/comparesketch.sh -> build/bdist.linux-armv7l/wheel/ARGs_OAP/bin/bbmap 2021-12-19T06:12:47,105 copying build/lib/ARGs_OAP/bin/bbmap/reducesilva.sh -> build/bdist.linux-armv7l/wheel/ARGs_OAP/bin/bbmap 2021-12-19T06:12:47,110 copying build/lib/ARGs_OAP/bin/bbmap/gi2taxid.sh -> build/bdist.linux-armv7l/wheel/ARGs_OAP/bin/bbmap 2021-12-19T06:12:47,116 copying build/lib/ARGs_OAP/bin/bbmap/gitable.sh -> build/bdist.linux-armv7l/wheel/ARGs_OAP/bin/bbmap 2021-12-19T06:12:47,121 copying build/lib/ARGs_OAP/bin/bbmap/taxtree.sh -> build/bdist.linux-armv7l/wheel/ARGs_OAP/bin/bbmap 2021-12-19T06:12:47,127 copying build/lib/ARGs_OAP/bin/bbmap/randomgenome.sh -> build/bdist.linux-armv7l/wheel/ARGs_OAP/bin/bbmap 2021-12-19T06:12:47,132 copying build/lib/ARGs_OAP/bin/bbmap/replaceheaders.sh -> build/bdist.linux-armv7l/wheel/ARGs_OAP/bin/bbmap 2021-12-19T06:12:47,138 copying build/lib/ARGs_OAP/bin/bbmap/readqc.sh -> build/bdist.linux-armv7l/wheel/ARGs_OAP/bin/bbmap 2021-12-19T06:12:47,143 copying build/lib/ARGs_OAP/bin/bbmap/dedupe2.sh -> build/bdist.linux-armv7l/wheel/ARGs_OAP/bin/bbmap 2021-12-19T06:12:47,148 copying build/lib/ARGs_OAP/bin/bbmap/analyzeaccession.sh -> build/bdist.linux-armv7l/wheel/ARGs_OAP/bin/bbmap 2021-12-19T06:12:47,154 copying build/lib/ARGs_OAP/bin/bbmap/rename.sh -> build/bdist.linux-armv7l/wheel/ARGs_OAP/bin/bbmap 2021-12-19T06:12:47,160 copying build/lib/ARGs_OAP/bin/bbmap/grademerge.sh -> build/bdist.linux-armv7l/wheel/ARGs_OAP/bin/bbmap 2021-12-19T06:12:47,165 copying build/lib/ARGs_OAP/bin/bbmap/sketchblacklist2.sh -> build/bdist.linux-armv7l/wheel/ARGs_OAP/bin/bbmap 2021-12-19T06:12:47,171 copying build/lib/ARGs_OAP/bin/bbmap/summarizecontam.sh -> build/bdist.linux-armv7l/wheel/ARGs_OAP/bin/bbmap 2021-12-19T06:12:47,176 copying build/lib/ARGs_OAP/bin/bbmap/mergepgm.sh -> build/bdist.linux-armv7l/wheel/ARGs_OAP/bin/bbmap 2021-12-19T06:12:47,182 copying build/lib/ARGs_OAP/bin/bbmap/synthmda.sh -> build/bdist.linux-armv7l/wheel/ARGs_OAP/bin/bbmap 2021-12-19T06:12:47,187 copying build/lib/ARGs_OAP/bin/bbmap/commonkmers.sh -> build/bdist.linux-armv7l/wheel/ARGs_OAP/bin/bbmap 2021-12-19T06:12:47,193 copying build/lib/ARGs_OAP/bin/bbmap/phylip2fasta.sh -> build/bdist.linux-armv7l/wheel/ARGs_OAP/bin/bbmap 2021-12-19T06:12:47,198 copying build/lib/ARGs_OAP/bin/bbmap/summarizemerge.sh -> build/bdist.linux-armv7l/wheel/ARGs_OAP/bin/bbmap 2021-12-19T06:12:47,204 copying build/lib/ARGs_OAP/bin/bbmap/splitsam6way.sh -> build/bdist.linux-armv7l/wheel/ARGs_OAP/bin/bbmap 2021-12-19T06:12:47,209 copying build/lib/ARGs_OAP/bin/bbmap/webcheck.sh -> build/bdist.linux-armv7l/wheel/ARGs_OAP/bin/bbmap 2021-12-19T06:12:47,215 copying build/lib/ARGs_OAP/bin/bbmap/taxonomy.sh -> build/bdist.linux-armv7l/wheel/ARGs_OAP/bin/bbmap 2021-12-19T06:12:47,220 copying build/lib/ARGs_OAP/bin/bbmap/bbmapskimmer.sh -> build/bdist.linux-armv7l/wheel/ARGs_OAP/bin/bbmap 2021-12-19T06:12:47,226 copying build/lib/ARGs_OAP/bin/bbmap/removemicrobes.sh -> build/bdist.linux-armv7l/wheel/ARGs_OAP/bin/bbmap 2021-12-19T06:12:47,232 copying build/lib/ARGs_OAP/bin/bbmap/bbsketch.sh -> build/bdist.linux-armv7l/wheel/ARGs_OAP/bin/bbmap 2021-12-19T06:12:47,237 copying build/lib/ARGs_OAP/bin/bbmap/sendsketch.sh -> build/bdist.linux-armv7l/wheel/ARGs_OAP/bin/bbmap 2021-12-19T06:12:47,244 copying build/lib/ARGs_OAP/bin/bbmap/filterlines.sh -> build/bdist.linux-armv7l/wheel/ARGs_OAP/bin/bbmap 2021-12-19T06:12:47,250 copying build/lib/ARGs_OAP/bin/bbmap/muxbyname.sh -> build/bdist.linux-armv7l/wheel/ARGs_OAP/bin/bbmap 2021-12-19T06:12:47,255 copying build/lib/ARGs_OAP/bin/bbmap/makecontaminatedgenomes.sh -> build/bdist.linux-armv7l/wheel/ARGs_OAP/bin/bbmap 2021-12-19T06:12:47,261 copying build/lib/ARGs_OAP/bin/bbmap/getreads.sh -> build/bdist.linux-armv7l/wheel/ARGs_OAP/bin/bbmap 2021-12-19T06:12:47,266 copying build/lib/ARGs_OAP/bin/bbmap/loadreads.sh -> build/bdist.linux-armv7l/wheel/ARGs_OAP/bin/bbmap 2021-12-19T06:12:47,272 copying build/lib/ARGs_OAP/bin/bbmap/mergesam.sh -> build/bdist.linux-armv7l/wheel/ARGs_OAP/bin/bbmap 2021-12-19T06:12:47,277 copying build/lib/ARGs_OAP/bin/bbmap/translate6frames.sh -> build/bdist.linux-armv7l/wheel/ARGs_OAP/bin/bbmap 2021-12-19T06:12:47,283 copying build/lib/ARGs_OAP/bin/bbmap/shred.sh -> build/bdist.linux-armv7l/wheel/ARGs_OAP/bin/bbmap 2021-12-19T06:12:47,289 copying build/lib/ARGs_OAP/bin/bbmap/bbmask.sh -> build/bdist.linux-armv7l/wheel/ARGs_OAP/bin/bbmap 2021-12-19T06:12:47,295 copying build/lib/ARGs_OAP/bin/bbmap/tetramerfreq.sh -> build/bdist.linux-armv7l/wheel/ARGs_OAP/bin/bbmap 2021-12-19T06:12:47,301 copying build/lib/ARGs_OAP/bin/bbmap/summarizequast.sh -> build/bdist.linux-armv7l/wheel/ARGs_OAP/bin/bbmap 2021-12-19T06:12:47,306 copying build/lib/ARGs_OAP/bin/bbmap/matrixtocolumns.sh -> build/bdist.linux-armv7l/wheel/ARGs_OAP/bin/bbmap 2021-12-19T06:12:47,312 copying build/lib/ARGs_OAP/bin/bbmap/testfilesystem.sh -> build/bdist.linux-armv7l/wheel/ARGs_OAP/bin/bbmap 2021-12-19T06:12:47,317 copying build/lib/ARGs_OAP/bin/bbmap/filtersubs.sh -> build/bdist.linux-armv7l/wheel/ARGs_OAP/bin/bbmap 2021-12-19T06:12:47,323 copying build/lib/ARGs_OAP/bin/bbmap/rqcfilter2.sh -> build/bdist.linux-armv7l/wheel/ARGs_OAP/bin/bbmap 2021-12-19T06:12:47,330 copying build/lib/ARGs_OAP/bin/bbmap/comparegff.sh -> build/bdist.linux-armv7l/wheel/ARGs_OAP/bin/bbmap 2021-12-19T06:12:47,335 copying build/lib/ARGs_OAP/bin/bbmap/estherfilter.sh -> build/bdist.linux-armv7l/wheel/ARGs_OAP/bin/bbmap 2021-12-19T06:12:47,341 copying build/lib/ARGs_OAP/bin/bbmap/cutgff.sh -> build/bdist.linux-armv7l/wheel/ARGs_OAP/bin/bbmap 2021-12-19T06:12:47,346 copying build/lib/ARGs_OAP/bin/bbmap/bbcountunique.sh -> build/bdist.linux-armv7l/wheel/ARGs_OAP/bin/bbmap 2021-12-19T06:12:47,352 copying build/lib/ARGs_OAP/bin/bbmap/taxserver.sh -> build/bdist.linux-armv7l/wheel/ARGs_OAP/bin/bbmap 2021-12-19T06:12:47,358 copying build/lib/ARGs_OAP/bin/bbmap/repair.sh -> build/bdist.linux-armv7l/wheel/ARGs_OAP/bin/bbmap 2021-12-19T06:12:47,364 copying build/lib/ARGs_OAP/bin/bbmap/addssu.sh -> build/bdist.linux-armv7l/wheel/ARGs_OAP/bin/bbmap 2021-12-19T06:12:47,369 copying build/lib/ARGs_OAP/bin/bbmap/explodetree.sh -> build/bdist.linux-armv7l/wheel/ARGs_OAP/bin/bbmap 2021-12-19T06:12:47,375 copying build/lib/ARGs_OAP/bin/bbmap/countbarcodes.sh -> build/bdist.linux-armv7l/wheel/ARGs_OAP/bin/bbmap 2021-12-19T06:12:47,380 copying build/lib/ARGs_OAP/bin/bbmap/gi2ancestors.sh -> build/bdist.linux-armv7l/wheel/ARGs_OAP/bin/bbmap 2021-12-19T06:12:47,386 copying build/lib/ARGs_OAP/bin/bbmap/mapPacBio.sh -> build/bdist.linux-armv7l/wheel/ARGs_OAP/bin/bbmap 2021-12-19T06:12:47,392 copying build/lib/ARGs_OAP/bin/bbmap/reformat.sh -> build/bdist.linux-armv7l/wheel/ARGs_OAP/bin/bbmap 2021-12-19T06:12:47,399 copying build/lib/ARGs_OAP/bin/bbmap/countgc.sh -> build/bdist.linux-armv7l/wheel/ARGs_OAP/bin/bbmap 2021-12-19T06:12:47,404 copying build/lib/ARGs_OAP/bin/bbmap/representative.sh -> build/bdist.linux-armv7l/wheel/ARGs_OAP/bin/bbmap 2021-12-19T06:12:47,410 copying build/lib/ARGs_OAP/bin/bbmap/kmercountmulti.sh -> build/bdist.linux-armv7l/wheel/ARGs_OAP/bin/bbmap 2021-12-19T06:12:47,418 copying build/lib/ARGs_OAP/bin/bbmap/clumpify.sh -> build/bdist.linux-armv7l/wheel/ARGs_OAP/bin/bbmap 2021-12-19T06:12:47,425 copying build/lib/ARGs_OAP/bin/bbmap/filterbysequence.sh -> build/bdist.linux-armv7l/wheel/ARGs_OAP/bin/bbmap 2021-12-19T06:12:47,431 copying build/lib/ARGs_OAP/bin/bbmap/streamsam.sh -> build/bdist.linux-armv7l/wheel/ARGs_OAP/bin/bbmap 2021-12-19T06:12:47,436 copying build/lib/ARGs_OAP/bin/bbmap/summarizescafstats.sh -> build/bdist.linux-armv7l/wheel/ARGs_OAP/bin/bbmap 2021-12-19T06:12:47,442 copying build/lib/ARGs_OAP/bin/bbmap/consect.sh -> build/bdist.linux-armv7l/wheel/ARGs_OAP/bin/bbmap 2021-12-19T06:12:47,448 copying build/lib/ARGs_OAP/bin/bbmap/kmercoverage.sh -> build/bdist.linux-armv7l/wheel/ARGs_OAP/bin/bbmap 2021-12-19T06:12:47,454 copying build/lib/ARGs_OAP/bin/bbmap/bbduk.sh -> build/bdist.linux-armv7l/wheel/ARGs_OAP/bin/bbmap 2021-12-19T06:12:47,462 copying build/lib/ARGs_OAP/bin/bbmap/shuffle2.sh -> build/bdist.linux-armv7l/wheel/ARGs_OAP/bin/bbmap 2021-12-19T06:12:47,467 copying build/lib/ARGs_OAP/bin/bbmap/fetchproks.sh -> build/bdist.linux-armv7l/wheel/ARGs_OAP/bin/bbmap 2021-12-19T06:12:47,473 copying build/lib/ARGs_OAP/bin/bbmap/mergebarcodes.sh -> build/bdist.linux-armv7l/wheel/ARGs_OAP/bin/bbmap 2021-12-19T06:12:47,479 copying build/lib/ARGs_OAP/bin/bbmap/tadpipe.sh -> build/bdist.linux-armv7l/wheel/ARGs_OAP/bin/bbmap 2021-12-19T06:12:47,484 copying build/lib/ARGs_OAP/bin/bbmap/dedupebymapping.sh -> build/bdist.linux-armv7l/wheel/ARGs_OAP/bin/bbmap 2021-12-19T06:12:47,490 copying build/lib/ARGs_OAP/bin/bbmap/kcompress.sh -> build/bdist.linux-armv7l/wheel/ARGs_OAP/bin/bbmap 2021-12-19T06:12:47,496 copying build/lib/ARGs_OAP/bin/bbmap/processhi-c.sh -> build/bdist.linux-armv7l/wheel/ARGs_OAP/bin/bbmap 2021-12-19T06:12:47,502 copying build/lib/ARGs_OAP/bin/bbmap/a_sample_mt.sh -> build/bdist.linux-armv7l/wheel/ARGs_OAP/bin/bbmap 2021-12-19T06:12:47,507 copying build/lib/ARGs_OAP/bin/bbmap/decontaminate.sh -> build/bdist.linux-armv7l/wheel/ARGs_OAP/bin/bbmap 2021-12-19T06:12:47,514 copying build/lib/ARGs_OAP/bin/bbmap/taxsize.sh -> build/bdist.linux-armv7l/wheel/ARGs_OAP/bin/bbmap 2021-12-19T06:12:47,519 copying build/lib/ARGs_OAP/bin/bbmap/mergesketch.sh -> build/bdist.linux-armv7l/wheel/ARGs_OAP/bin/bbmap 2021-12-19T06:12:47,525 copying build/lib/ARGs_OAP/bin/bbmap/cutprimers.sh -> build/bdist.linux-armv7l/wheel/ARGs_OAP/bin/bbmap 2021-12-19T06:12:47,531 copying build/lib/ARGs_OAP/bin/bbmap/bbrename.sh -> build/bdist.linux-armv7l/wheel/ARGs_OAP/bin/bbmap 2021-12-19T06:12:47,536 copying build/lib/ARGs_OAP/bin/samtools -> build/bdist.linux-armv7l/wheel/ARGs_OAP/bin 2021-12-19T06:12:47,591 copying build/lib/ARGs_OAP/bin/divide_extract.fa_meta_data_online.pl -> build/bdist.linux-armv7l/wheel/ARGs_OAP/bin 2021-12-19T06:12:47,597 copying build/lib/ARGs_OAP/stage_two.py -> build/bdist.linux-armv7l/wheel/ARGs_OAP 2021-12-19T06:12:47,602 running install_egg_info 2021-12-19T06:12:47,651 running egg_info 2021-12-19T06:12:47,652 writing entry points to ARGs_OAP.egg-info/entry_points.txt 2021-12-19T06:12:47,655 writing dependency_links to ARGs_OAP.egg-info/dependency_links.txt 2021-12-19T06:12:47,657 writing ARGs_OAP.egg-info/PKG-INFO 2021-12-19T06:12:47,661 writing top-level names to ARGs_OAP.egg-info/top_level.txt 2021-12-19T06:12:47,787 reading manifest file 'ARGs_OAP.egg-info/SOURCES.txt' 2021-12-19T06:12:48,867 reading manifest template 'MANIFEST.in' 2021-12-19T06:12:48,868 warning: no files found matching 'requirements.txt' 2021-12-19T06:12:51,516 warning: no previously-included files matching '*.DS_Store' found anywhere in distribution 2021-12-19T06:12:51,862 writing manifest file 'ARGs_OAP.egg-info/SOURCES.txt' 2021-12-19T06:12:51,877 Copying ARGs_OAP.egg-info to build/bdist.linux-armv7l/wheel/ARGs_OAP-2.3.2-py3.5.egg-info 2021-12-19T06:12:51,912 running install_scripts 2021-12-19T06:12:52,100 creating build/bdist.linux-armv7l/wheel/ARGs_OAP-2.3.2.dist-info/WHEEL 2021-12-19T06:13:34,045 Building wheel for args-oap (setup.py): finished with status 'done' 2021-12-19T06:13:34,706 Created wheel for args-oap: filename=ARGs_OAP-2.3.2-py3-none-any.whl size=40127901 sha256=25ba67f245ba38e790ac33c2227a82ceaadc1df681bf94bf3f00e394b1aaf845 2021-12-19T06:13:34,706 Stored in directory: /tmp/pip-ephem-wheel-cache-pfkw4gzh/wheels/41/05/e6/c0aa24e45b252af7b78dd2da8ab46f2e5db52ba6bfbd3ce5ae 2021-12-19T06:13:34,764 Successfully built args-oap 2021-12-19T06:13:41,690 Removed build tracker: '/tmp/pip-req-tracker-jmm3r2ot'