2021-12-20T07:10:46,016 Created temporary directory: /tmp/pip-ephem-wheel-cache-2_byu8uq 2021-12-20T07:10:46,022 Created temporary directory: /tmp/pip-req-tracker-sjpzh2gk 2021-12-20T07:10:46,022 Initialized build tracking at /tmp/pip-req-tracker-sjpzh2gk 2021-12-20T07:10:46,023 Created build tracker: /tmp/pip-req-tracker-sjpzh2gk 2021-12-20T07:10:46,023 Entered build tracker: /tmp/pip-req-tracker-sjpzh2gk 2021-12-20T07:10:46,024 Created temporary directory: /tmp/pip-wheel-3_ek7ub2 2021-12-20T07:10:46,088 Looking in indexes: https://pypi.org/simple, https://www.piwheels.org/simple 2021-12-20T07:10:46,093 2 location(s) to search for versions of depht: 2021-12-20T07:10:46,093 * https://pypi.org/simple/depht/ 2021-12-20T07:10:46,093 * https://www.piwheels.org/simple/depht/ 2021-12-20T07:10:46,094 Fetching project page and analyzing links: https://pypi.org/simple/depht/ 2021-12-20T07:10:46,096 Getting page https://pypi.org/simple/depht/ 2021-12-20T07:10:46,099 Found index url https://pypi.org/simple 2021-12-20T07:10:46,295 Skipping link: No binaries permitted for depht: https://files.pythonhosted.org/packages/19/72/fe63d35459233b43e179b3579a137c84b3586a1ec3f6674ce1340fadc2fc/depht-1.0.0-py3-none-any.whl#sha256=a375093b069cfcfc1a0d8cf6e37c3aecbc4b8cd717397b251190bf605d06a0a4 (from https://pypi.org/simple/depht/) (requires-python:>=3.6) 2021-12-20T07:10:46,296 Found link https://files.pythonhosted.org/packages/91/61/e0c3c1e725b4a281c087467594e908e0a46e1a91ec288ac09b22c4a4ac17/depht-1.0.0.tar.gz#sha256=73eb7bd7d32d52ae5e0bdb62d8ce17cf59d68d633805075a876d6f3cf85da123 (from https://pypi.org/simple/depht/) (requires-python:>=3.6), version: 1.0.0 2021-12-20T07:10:46,297 Skipping link: No binaries permitted for depht: https://files.pythonhosted.org/packages/3a/8d/e2d2dea7750112dc8b17f17828c6700755e580cfbfadbb6ca1f29cfba3b1/depht-1.0.1-py3-none-any.whl#sha256=93b59e25c7de78b41fa21c3af9a3348c5c69256786790c8b15937b9206cd8e6c (from https://pypi.org/simple/depht/) (requires-python:>=3.6) 2021-12-20T07:10:46,298 Found link https://files.pythonhosted.org/packages/39/4b/eda220e1c8d0f7fa2733a9ca9b4918e5ab3e61c8eae17fac32f8719f9e1d/depht-1.0.1.tar.gz#sha256=c623361560ccb615d9ec68467e99bac0e97dca43754d8e86a904ad940e6404a5 (from https://pypi.org/simple/depht/) (requires-python:>=3.6), version: 1.0.1 2021-12-20T07:10:46,299 Fetching project page and analyzing links: https://www.piwheels.org/simple/depht/ 2021-12-20T07:10:46,300 Getting page https://www.piwheels.org/simple/depht/ 2021-12-20T07:10:46,302 Found index url https://www.piwheels.org/simple 2021-12-20T07:10:46,528 Skipping link: No binaries permitted for depht: https://www.piwheels.org/simple/depht/depht-1.0.0-py3-none-any.whl#sha256=295b3534c03d4d33691ed03b9aaa1769cce7c3dfd049472609861851d5147697 (from https://www.piwheels.org/simple/depht/) (requires-python:>=3.6) 2021-12-20T07:10:46,529 Skipping link: not a file: https://www.piwheels.org/simple/depht/ 2021-12-20T07:10:46,529 Skipping link: not a file: https://pypi.org/simple/depht/ 2021-12-20T07:10:46,561 Given no hashes to check 1 links for project 'depht': discarding no candidates 2021-12-20T07:10:46,591 Collecting depht==1.0.1 2021-12-20T07:10:46,594 Created temporary directory: /tmp/pip-unpack-ph2qhx87 2021-12-20T07:10:46,859 Downloading depht-1.0.1.tar.gz (64 kB) 2021-12-20T07:10:47,067 Added depht==1.0.1 from https://files.pythonhosted.org/packages/39/4b/eda220e1c8d0f7fa2733a9ca9b4918e5ab3e61c8eae17fac32f8719f9e1d/depht-1.0.1.tar.gz#sha256=c623361560ccb615d9ec68467e99bac0e97dca43754d8e86a904ad940e6404a5 to build tracker '/tmp/pip-req-tracker-sjpzh2gk' 2021-12-20T07:10:47,075 Created temporary directory: /tmp/pip-build-env-8ug1d130 2021-12-20T07:10:47,090 Created temporary directory: /tmp/pip-standalone-pip-2dvo0i1p 2021-12-20T07:10:48,742 Installing build dependencies: started 2021-12-20T07:10:48,743 Running command /usr/bin/python3 /tmp/pip-standalone-pip-2dvo0i1p/__env_pip__.zip/pip install --ignore-installed --no-user --prefix /tmp/pip-build-env-8ug1d130/overlay --no-warn-script-location -v --no-binary depht --only-binary :none: -i https://pypi.org/simple --extra-index-url https://www.piwheels.org/simple --prefer-binary -- setuptools wheel 2021-12-20T07:10:56,505 Using pip 21.3.1 from /tmp/pip-standalone-pip-2dvo0i1p/__env_pip__.zip/pip (python 3.7) 2021-12-20T07:10:57,299 Looking in indexes: https://pypi.org/simple, https://www.piwheels.org/simple 2021-12-20T07:11:02,299 Collecting setuptools 2021-12-20T07:11:02,349 Using cached setuptools-60.0.0-py3-none-any.whl (952 kB) 2021-12-20T07:11:03,065 Collecting wheel 2021-12-20T07:11:03,101 Using cached https://www.piwheels.org/simple/wheel/wheel-0.37.0-py2.py3-none-any.whl (35 kB) 2021-12-20T07:11:06,727 Installing collected packages: wheel, setuptools 2021-12-20T07:11:06,983 Creating /tmp/pip-build-env-8ug1d130/overlay/bin 2021-12-20T07:11:06,987 changing mode of /tmp/pip-build-env-8ug1d130/overlay/bin/wheel to 755 2021-12-20T07:11:10,044 Successfully installed setuptools-60.0.0 wheel-0.37.0 2021-12-20T07:11:10,586 Installing build dependencies: finished with status 'done' 2021-12-20T07:11:10,607 Getting requirements to build wheel: started 2021-12-20T07:11:10,608 Running command /usr/bin/python3 /usr/local/lib/python3.7/dist-packages/pip/_vendor/pep517/in_process/_in_process.py get_requires_for_build_wheel /tmp/tmpqcdycg70 2021-12-20T07:11:12,383 running egg_info 2021-12-20T07:11:12,437 writing manifest file 'src/depht.egg-info/SOURCES.txt' 2021-12-20T07:11:12,542 Getting requirements to build wheel: finished with status 'done' 2021-12-20T07:11:12,560 Created temporary directory: /tmp/pip-modern-metadata-ax4dtr5y 2021-12-20T07:11:12,566 Preparing metadata (pyproject.toml): started 2021-12-20T07:11:12,566 Running command /usr/bin/python3 /usr/local/lib/python3.7/dist-packages/pip/_vendor/pep517/in_process/_in_process.py prepare_metadata_for_build_wheel /tmp/tmp8du01ert 2021-12-20T07:11:14,173 running dist_info 2021-12-20T07:11:14,200 creating /tmp/pip-modern-metadata-ax4dtr5y/depht.egg-info 2021-12-20T07:11:14,216 writing manifest file '/tmp/pip-modern-metadata-ax4dtr5y/depht.egg-info/SOURCES.txt' 2021-12-20T07:11:14,244 writing manifest file '/tmp/pip-modern-metadata-ax4dtr5y/depht.egg-info/SOURCES.txt' 2021-12-20T07:11:14,510 Preparing metadata (pyproject.toml): finished with status 'done' 2021-12-20T07:11:14,524 Source in /tmp/pip-wheel-3_ek7ub2/depht_917736af474a4374adb61404d93261f8 has version 1.0.1, which satisfies requirement depht==1.0.1 from https://files.pythonhosted.org/packages/39/4b/eda220e1c8d0f7fa2733a9ca9b4918e5ab3e61c8eae17fac32f8719f9e1d/depht-1.0.1.tar.gz#sha256=c623361560ccb615d9ec68467e99bac0e97dca43754d8e86a904ad940e6404a5 2021-12-20T07:11:14,526 Removed depht==1.0.1 from https://files.pythonhosted.org/packages/39/4b/eda220e1c8d0f7fa2733a9ca9b4918e5ab3e61c8eae17fac32f8719f9e1d/depht-1.0.1.tar.gz#sha256=c623361560ccb615d9ec68467e99bac0e97dca43754d8e86a904ad940e6404a5 from build tracker '/tmp/pip-req-tracker-sjpzh2gk' 2021-12-20T07:11:14,540 Created temporary directory: /tmp/pip-unpack-_nz_r492 2021-12-20T07:11:14,541 Building wheels for collected packages: depht 2021-12-20T07:11:14,549 Created temporary directory: /tmp/pip-wheel-zz89e5t1 2021-12-20T07:11:14,550 Destination directory: /tmp/pip-wheel-zz89e5t1 2021-12-20T07:11:14,555 Building wheel for depht (pyproject.toml): started 2021-12-20T07:11:14,556 Running command /usr/bin/python3 /usr/local/lib/python3.7/dist-packages/pip/_vendor/pep517/in_process/_in_process.py build_wheel /tmp/tmpax23jfp0 2021-12-20T07:11:16,250 running bdist_wheel 2021-12-20T07:11:16,671 running build 2021-12-20T07:11:16,672 running build_py 2021-12-20T07:11:16,679 creating build 2021-12-20T07:11:16,680 creating build/lib 2021-12-20T07:11:16,681 creating build/lib/depht 2021-12-20T07:11:16,683 copying src/depht/__main__.py -> build/lib/depht 2021-12-20T07:11:16,688 copying src/depht/__init__.py -> build/lib/depht 2021-12-20T07:11:16,693 creating build/lib/depht/functions 2021-12-20T07:11:16,695 copying src/depht/functions/visualization.py -> build/lib/depht/functions 2021-12-20T07:11:16,699 copying src/depht/functions/multiprocess.py -> build/lib/depht/functions 2021-12-20T07:11:16,703 copying src/depht/functions/sliding_window.py -> build/lib/depht/functions 2021-12-20T07:11:16,706 copying src/depht/functions/mmseqs.py -> build/lib/depht/functions 2021-12-20T07:11:16,711 copying src/depht/functions/annotation.py -> build/lib/depht/functions 2021-12-20T07:11:16,715 copying src/depht/functions/__init__.py -> build/lib/depht/functions 2021-12-20T07:11:16,717 copying src/depht/functions/att.py -> build/lib/depht/functions 2021-12-20T07:11:16,722 copying src/depht/functions/run_command.py -> build/lib/depht/functions 2021-12-20T07:11:16,725 copying src/depht/functions/sniff_format.py -> build/lib/depht/functions 2021-12-20T07:11:16,728 copying src/depht/functions/statistics.py -> build/lib/depht/functions 2021-12-20T07:11:16,732 copying src/depht/functions/find_homologs.py -> build/lib/depht/functions 2021-12-20T07:11:16,735 copying src/depht/functions/fasta.py -> build/lib/depht/functions 2021-12-20T07:11:16,738 copying src/depht/functions/blastn.py -> build/lib/depht/functions 2021-12-20T07:11:16,741 copying src/depht/functions/prophage_prediction.py -> build/lib/depht/functions 2021-12-20T07:11:16,747 creating build/lib/depht/classes 2021-12-20T07:11:16,748 copying src/depht/classes/hhresult.py -> build/lib/depht/classes 2021-12-20T07:11:16,753 copying src/depht/classes/__init__.py -> build/lib/depht/classes 2021-12-20T07:11:16,756 copying src/depht/classes/progress.py -> build/lib/depht/classes 2021-12-20T07:11:16,758 copying src/depht/classes/prophage.py -> build/lib/depht/classes 2021-12-20T07:11:16,763 copying src/depht/classes/file_translator.py -> build/lib/depht/classes 2021-12-20T07:11:16,766 copying src/depht/classes/prophage_classifier.py -> build/lib/depht/classes 2021-12-20T07:11:16,771 copying src/depht/classes/contig.py -> build/lib/depht/classes 2021-12-20T07:11:16,788 running install 2021-12-20T07:11:16,795 running install_lib 2021-12-20T07:11:16,801 creating build/bdist.linux-armv7l 2021-12-20T07:11:16,802 creating build/bdist.linux-armv7l/wheel 2021-12-20T07:11:16,805 creating build/bdist.linux-armv7l/wheel/depht 2021-12-20T07:11:16,816 creating build/bdist.linux-armv7l/wheel/depht/functions 2021-12-20T07:11:16,868 creating build/bdist.linux-armv7l/wheel/depht/classes 2021-12-20T07:11:16,894 running install_egg_info 2021-12-20T07:11:16,930 running egg_info 2021-12-20T07:11:16,965 writing manifest file 'src/depht.egg-info/SOURCES.txt' 2021-12-20T07:11:16,968 Copying src/depht.egg-info to build/bdist.linux-armv7l/wheel/depht-1.0.1-py3.7.egg-info 2021-12-20T07:11:16,993 running install_scripts 2021-12-20T07:11:17,465 Building wheel for depht (pyproject.toml): finished with status 'done' 2021-12-20T07:11:17,477 Created wheel for depht: filename=depht-1.0.1-py3-none-any.whl size=66364 sha256=6ce913764fa0fbd66aca333bfaee4b8ba291318ddf7d12eb333ee775bb6399cb 2021-12-20T07:11:17,478 Stored in directory: /tmp/pip-ephem-wheel-cache-2_byu8uq/wheels/9c/dc/a9/288b62d04b6fcd900e6dcf9c1df597ce0332e6001d8fa13fa0 2021-12-20T07:11:17,505 Successfully built depht 2021-12-20T07:11:17,515 Removed build tracker: '/tmp/pip-req-tracker-sjpzh2gk'