2021-12-20T13:46:02,803 Created temporary directory: /tmp/pip-ephem-wheel-cache-y64cgzqz 2021-12-20T13:46:02,809 Created temporary directory: /tmp/pip-req-tracker-obtiiya8 2021-12-20T13:46:02,809 Initialized build tracking at /tmp/pip-req-tracker-obtiiya8 2021-12-20T13:46:02,810 Created build tracker: /tmp/pip-req-tracker-obtiiya8 2021-12-20T13:46:02,810 Entered build tracker: /tmp/pip-req-tracker-obtiiya8 2021-12-20T13:46:02,811 Created temporary directory: /tmp/pip-wheel-q88pdqr_ 2021-12-20T13:46:02,881 Looking in indexes: https://pypi.org/simple, https://www.piwheels.org/simple 2021-12-20T13:46:02,886 2 location(s) to search for versions of depht: 2021-12-20T13:46:02,886 * https://pypi.org/simple/depht/ 2021-12-20T13:46:02,886 * https://www.piwheels.org/simple/depht/ 2021-12-20T13:46:02,887 Fetching project page and analyzing links: https://pypi.org/simple/depht/ 2021-12-20T13:46:02,888 Getting page https://pypi.org/simple/depht/ 2021-12-20T13:46:02,891 Found index url https://pypi.org/simple 2021-12-20T13:46:03,094 Skipping link: No binaries permitted for depht: https://files.pythonhosted.org/packages/19/72/fe63d35459233b43e179b3579a137c84b3586a1ec3f6674ce1340fadc2fc/depht-1.0.0-py3-none-any.whl#sha256=a375093b069cfcfc1a0d8cf6e37c3aecbc4b8cd717397b251190bf605d06a0a4 (from https://pypi.org/simple/depht/) (requires-python:>=3.6) 2021-12-20T13:46:03,096 Found link https://files.pythonhosted.org/packages/91/61/e0c3c1e725b4a281c087467594e908e0a46e1a91ec288ac09b22c4a4ac17/depht-1.0.0.tar.gz#sha256=73eb7bd7d32d52ae5e0bdb62d8ce17cf59d68d633805075a876d6f3cf85da123 (from https://pypi.org/simple/depht/) (requires-python:>=3.6), version: 1.0.0 2021-12-20T13:46:03,097 Skipping link: No binaries permitted for depht: https://files.pythonhosted.org/packages/3a/8d/e2d2dea7750112dc8b17f17828c6700755e580cfbfadbb6ca1f29cfba3b1/depht-1.0.1-py3-none-any.whl#sha256=93b59e25c7de78b41fa21c3af9a3348c5c69256786790c8b15937b9206cd8e6c (from https://pypi.org/simple/depht/) (requires-python:>=3.6) 2021-12-20T13:46:03,098 Found link https://files.pythonhosted.org/packages/39/4b/eda220e1c8d0f7fa2733a9ca9b4918e5ab3e61c8eae17fac32f8719f9e1d/depht-1.0.1.tar.gz#sha256=c623361560ccb615d9ec68467e99bac0e97dca43754d8e86a904ad940e6404a5 (from https://pypi.org/simple/depht/) (requires-python:>=3.6), version: 1.0.1 2021-12-20T13:46:03,099 Skipping link: No binaries permitted for depht: https://files.pythonhosted.org/packages/32/5e/b4a44d00807cb6ace2704a7bcb063535c0d55fd66876c9f0dfb969311c1f/depht-1.0.2-py3-none-any.whl#sha256=9aab1c0ae369d511c3f89a6a4491a7455ce30950f9406a53be0ffa305e31e6cc (from https://pypi.org/simple/depht/) (requires-python:>=3.6) 2021-12-20T13:46:03,100 Found link https://files.pythonhosted.org/packages/d9/e7/1db918963510d931b43704f804783319af47f7c82f5d9a2e53f6936bd67a/depht-1.0.2.tar.gz#sha256=ff8af7ddde50765d86c95835482160c536639f78ea0d6750c5a7bd08e1894654 (from https://pypi.org/simple/depht/) (requires-python:>=3.6), version: 1.0.2 2021-12-20T13:46:03,100 Fetching project page and analyzing links: https://www.piwheels.org/simple/depht/ 2021-12-20T13:46:03,101 Getting page https://www.piwheels.org/simple/depht/ 2021-12-20T13:46:03,103 Found index url https://www.piwheels.org/simple 2021-12-20T13:46:03,311 Skipping link: No binaries permitted for depht: https://www.piwheels.org/simple/depht/depht-1.0.0-py3-none-any.whl#sha256=295b3534c03d4d33691ed03b9aaa1769cce7c3dfd049472609861851d5147697 (from https://www.piwheels.org/simple/depht/) (requires-python:>=3.6) 2021-12-20T13:46:03,311 Skipping link: No binaries permitted for depht: https://www.piwheels.org/simple/depht/depht-1.0.1-py3-none-any.whl#sha256=6ce913764fa0fbd66aca333bfaee4b8ba291318ddf7d12eb333ee775bb6399cb (from https://www.piwheels.org/simple/depht/) (requires-python:>=3.6) 2021-12-20T13:46:03,312 Skipping link: not a file: https://www.piwheels.org/simple/depht/ 2021-12-20T13:46:03,312 Skipping link: not a file: https://pypi.org/simple/depht/ 2021-12-20T13:46:03,345 Given no hashes to check 1 links for project 'depht': discarding no candidates 2021-12-20T13:46:03,374 Collecting depht==1.0.2 2021-12-20T13:46:03,378 Created temporary directory: /tmp/pip-unpack-10m1b1wg 2021-12-20T13:46:03,627 Downloading depht-1.0.2.tar.gz (64 kB) 2021-12-20T13:46:03,837 Added depht==1.0.2 from https://files.pythonhosted.org/packages/d9/e7/1db918963510d931b43704f804783319af47f7c82f5d9a2e53f6936bd67a/depht-1.0.2.tar.gz#sha256=ff8af7ddde50765d86c95835482160c536639f78ea0d6750c5a7bd08e1894654 to build tracker '/tmp/pip-req-tracker-obtiiya8' 2021-12-20T13:46:03,845 Created temporary directory: /tmp/pip-build-env-egghm851 2021-12-20T13:46:03,863 Created temporary directory: /tmp/pip-standalone-pip-55r3hppg 2021-12-20T13:46:05,692 Installing build dependencies: started 2021-12-20T13:46:05,693 Running command /usr/bin/python3 /tmp/pip-standalone-pip-55r3hppg/__env_pip__.zip/pip install --ignore-installed --no-user --prefix /tmp/pip-build-env-egghm851/overlay --no-warn-script-location -v --no-binary depht --only-binary :none: -i https://pypi.org/simple --extra-index-url https://www.piwheels.org/simple --prefer-binary -- setuptools wheel 2021-12-20T13:46:13,475 Using pip 21.3.1 from /tmp/pip-standalone-pip-55r3hppg/__env_pip__.zip/pip (python 3.7) 2021-12-20T13:46:14,263 Looking in indexes: https://pypi.org/simple, https://www.piwheels.org/simple 2021-12-20T13:46:19,261 Collecting setuptools 2021-12-20T13:46:19,475 Using cached https://www.piwheels.org/simple/setuptools/setuptools-60.0.0-py3-none-any.whl (952 kB) 2021-12-20T13:46:20,193 Collecting wheel 2021-12-20T13:46:20,230 Using cached https://www.piwheels.org/simple/wheel/wheel-0.37.0-py2.py3-none-any.whl (35 kB) 2021-12-20T13:46:23,776 Installing collected packages: wheel, setuptools 2021-12-20T13:46:24,032 Creating /tmp/pip-build-env-egghm851/overlay/bin 2021-12-20T13:46:24,035 changing mode of /tmp/pip-build-env-egghm851/overlay/bin/wheel to 755 2021-12-20T13:46:27,087 Successfully installed setuptools-60.0.0 wheel-0.37.0 2021-12-20T13:46:27,636 Installing build dependencies: finished with status 'done' 2021-12-20T13:46:27,657 Getting requirements to build wheel: started 2021-12-20T13:46:27,658 Running command /usr/bin/python3 /usr/local/lib/python3.7/dist-packages/pip/_vendor/pep517/in_process/_in_process.py get_requires_for_build_wheel /tmp/tmpfy2i52j8 2021-12-20T13:46:29,418 running egg_info 2021-12-20T13:46:29,471 writing manifest file 'src/depht.egg-info/SOURCES.txt' 2021-12-20T13:46:29,576 Getting requirements to build wheel: finished with status 'done' 2021-12-20T13:46:29,594 Created temporary directory: /tmp/pip-modern-metadata-26afzlz8 2021-12-20T13:46:29,599 Preparing metadata (pyproject.toml): started 2021-12-20T13:46:29,600 Running command /usr/bin/python3 /usr/local/lib/python3.7/dist-packages/pip/_vendor/pep517/in_process/_in_process.py prepare_metadata_for_build_wheel /tmp/tmpcuq_f21j 2021-12-20T13:46:31,208 running dist_info 2021-12-20T13:46:31,235 creating /tmp/pip-modern-metadata-26afzlz8/depht.egg-info 2021-12-20T13:46:31,251 writing manifest file '/tmp/pip-modern-metadata-26afzlz8/depht.egg-info/SOURCES.txt' 2021-12-20T13:46:31,279 writing manifest file '/tmp/pip-modern-metadata-26afzlz8/depht.egg-info/SOURCES.txt' 2021-12-20T13:46:31,543 Preparing metadata (pyproject.toml): finished with status 'done' 2021-12-20T13:46:31,557 Source in /tmp/pip-wheel-q88pdqr_/depht_716d29ed07b04a5488edb81d711fad55 has version 1.0.2, which satisfies requirement depht==1.0.2 from https://files.pythonhosted.org/packages/d9/e7/1db918963510d931b43704f804783319af47f7c82f5d9a2e53f6936bd67a/depht-1.0.2.tar.gz#sha256=ff8af7ddde50765d86c95835482160c536639f78ea0d6750c5a7bd08e1894654 2021-12-20T13:46:31,559 Removed depht==1.0.2 from https://files.pythonhosted.org/packages/d9/e7/1db918963510d931b43704f804783319af47f7c82f5d9a2e53f6936bd67a/depht-1.0.2.tar.gz#sha256=ff8af7ddde50765d86c95835482160c536639f78ea0d6750c5a7bd08e1894654 from build tracker '/tmp/pip-req-tracker-obtiiya8' 2021-12-20T13:46:31,574 Created temporary directory: /tmp/pip-unpack-l5h2r_s0 2021-12-20T13:46:31,575 Building wheels for collected packages: depht 2021-12-20T13:46:31,583 Created temporary directory: /tmp/pip-wheel-af2onoc5 2021-12-20T13:46:31,583 Destination directory: /tmp/pip-wheel-af2onoc5 2021-12-20T13:46:31,588 Building wheel for depht (pyproject.toml): started 2021-12-20T13:46:31,589 Running command /usr/bin/python3 /usr/local/lib/python3.7/dist-packages/pip/_vendor/pep517/in_process/_in_process.py build_wheel /tmp/tmpafalpqt4 2021-12-20T13:46:33,260 running bdist_wheel 2021-12-20T13:46:33,679 running build 2021-12-20T13:46:33,680 running build_py 2021-12-20T13:46:33,687 creating build 2021-12-20T13:46:33,688 creating build/lib 2021-12-20T13:46:33,689 creating build/lib/depht 2021-12-20T13:46:33,691 copying src/depht/__init__.py -> build/lib/depht 2021-12-20T13:46:33,694 copying src/depht/__main__.py -> build/lib/depht 2021-12-20T13:46:33,701 creating build/lib/depht/functions 2021-12-20T13:46:33,702 copying src/depht/functions/att.py -> build/lib/depht/functions 2021-12-20T13:46:33,706 copying src/depht/functions/blastn.py -> build/lib/depht/functions 2021-12-20T13:46:33,709 copying src/depht/functions/statistics.py -> build/lib/depht/functions 2021-12-20T13:46:33,713 copying src/depht/functions/__init__.py -> build/lib/depht/functions 2021-12-20T13:46:33,715 copying src/depht/functions/sniff_format.py -> build/lib/depht/functions 2021-12-20T13:46:33,718 copying src/depht/functions/mmseqs.py -> build/lib/depht/functions 2021-12-20T13:46:33,722 copying src/depht/functions/prophage_prediction.py -> build/lib/depht/functions 2021-12-20T13:46:33,726 copying src/depht/functions/find_homologs.py -> build/lib/depht/functions 2021-12-20T13:46:33,730 copying src/depht/functions/multiprocess.py -> build/lib/depht/functions 2021-12-20T13:46:33,733 copying src/depht/functions/annotation.py -> build/lib/depht/functions 2021-12-20T13:46:33,736 copying src/depht/functions/run_command.py -> build/lib/depht/functions 2021-12-20T13:46:33,739 copying src/depht/functions/visualization.py -> build/lib/depht/functions 2021-12-20T13:46:33,743 copying src/depht/functions/sliding_window.py -> build/lib/depht/functions 2021-12-20T13:46:33,746 copying src/depht/functions/fasta.py -> build/lib/depht/functions 2021-12-20T13:46:33,750 creating build/lib/depht/classes 2021-12-20T13:46:33,751 copying src/depht/classes/prophage_classifier.py -> build/lib/depht/classes 2021-12-20T13:46:33,755 copying src/depht/classes/progress.py -> build/lib/depht/classes 2021-12-20T13:46:33,759 copying src/depht/classes/__init__.py -> build/lib/depht/classes 2021-12-20T13:46:33,761 copying src/depht/classes/prophage.py -> build/lib/depht/classes 2021-12-20T13:46:33,764 copying src/depht/classes/hhresult.py -> build/lib/depht/classes 2021-12-20T13:46:33,769 copying src/depht/classes/contig.py -> build/lib/depht/classes 2021-12-20T13:46:33,772 copying src/depht/classes/file_translator.py -> build/lib/depht/classes 2021-12-20T13:46:33,790 running install 2021-12-20T13:46:33,796 running install_lib 2021-12-20T13:46:33,802 creating build/bdist.linux-armv7l 2021-12-20T13:46:33,803 creating build/bdist.linux-armv7l/wheel 2021-12-20T13:46:33,806 creating build/bdist.linux-armv7l/wheel/depht 2021-12-20T13:46:33,812 creating build/bdist.linux-armv7l/wheel/depht/functions 2021-12-20T13:46:33,863 creating build/bdist.linux-armv7l/wheel/depht/classes 2021-12-20T13:46:33,892 running install_egg_info 2021-12-20T13:46:33,927 running egg_info 2021-12-20T13:46:33,961 writing manifest file 'src/depht.egg-info/SOURCES.txt' 2021-12-20T13:46:33,963 Copying src/depht.egg-info to build/bdist.linux-armv7l/wheel/depht-1.0.2-py3.7.egg-info 2021-12-20T13:46:33,985 running install_scripts 2021-12-20T13:46:34,451 Building wheel for depht (pyproject.toml): finished with status 'done' 2021-12-20T13:46:34,463 Created wheel for depht: filename=depht-1.0.2-py3-none-any.whl size=66338 sha256=e40087e26a118911beeba973a589afb546a8905bce3927348015d3b5ecb30fc4 2021-12-20T13:46:34,464 Stored in directory: /tmp/pip-ephem-wheel-cache-y64cgzqz/wheels/48/bb/69/72d1088a4504b912eaf004b70ecc38b5ec37b93cfe33af0995 2021-12-20T13:46:34,491 Successfully built depht 2021-12-20T13:46:34,502 Removed build tracker: '/tmp/pip-req-tracker-obtiiya8'