2021-12-20T19:17:33,951 Created temporary directory: /tmp/pip-ephem-wheel-cache-j_5wj3es
2021-12-20T19:17:33,956 Created temporary directory: /tmp/pip-req-tracker-5ug4g8sv
2021-12-20T19:17:33,957 Initialized build tracking at /tmp/pip-req-tracker-5ug4g8sv
2021-12-20T19:17:33,957 Created build tracker: /tmp/pip-req-tracker-5ug4g8sv
2021-12-20T19:17:33,958 Entered build tracker: /tmp/pip-req-tracker-5ug4g8sv
2021-12-20T19:17:33,959 Created temporary directory: /tmp/pip-wheel-b901gbm2
2021-12-20T19:17:34,029 Looking in indexes: https://pypi.org/simple, https://www.piwheels.org/simple
2021-12-20T19:17:34,034 2 location(s) to search for versions of fragmenstein:
2021-12-20T19:17:34,034 * https://pypi.org/simple/fragmenstein/
2021-12-20T19:17:34,034 * https://www.piwheels.org/simple/fragmenstein/
2021-12-20T19:17:34,035 Fetching project page and analyzing links: https://pypi.org/simple/fragmenstein/
2021-12-20T19:17:34,037 Getting page https://pypi.org/simple/fragmenstein/
2021-12-20T19:17:34,040 Found index url https://pypi.org/simple
2021-12-20T19:17:34,246   Found link https://files.pythonhosted.org/packages/79/ea/7241107f42ce973a3d450ec740b88e5c481b09a368f56e472a79a051a272/Fragmenstein-0.6.tar.gz#sha256=8a298c932ea1b6b55131b92b1553b9659c3b7f63a77db39b88e81051980440b6 (from https://pypi.org/simple/fragmenstein/), version: 0.6
2021-12-20T19:17:34,247   Found link https://files.pythonhosted.org/packages/a5/40/314e6be38aa08837214d20180853d6f7b1216ce5600cc08b9d2af71fddd1/fragmenstein-0.6.1.tar.gz#sha256=e97aafbe0ea51d18115dcd4107984769da0663cc0a20b53443d7f7aaac9bd701 (from https://pypi.org/simple/fragmenstein/), version: 0.6.1
2021-12-20T19:17:34,248   Found link https://files.pythonhosted.org/packages/01/5a/80ee1256cd2c279c50e75ec982d56dcd4abe9f4ac8bb4c19c37299fe8792/fragmenstein-0.6.2.tar.gz#sha256=167e96cb1182bd30a948ff6b919d05bb7f9cc04325d5d2ce842d9660fed5fb30 (from https://pypi.org/simple/fragmenstein/), version: 0.6.2
2021-12-20T19:17:34,248   Found link https://files.pythonhosted.org/packages/d0/5c/78b74cb56d283448857aab8e31dc7593ea40c278367cfddb5d8823f88af1/fragmenstein-0.6.3.tar.gz#sha256=dd8414e3152cc72855bfc85a886b41d7037002a96e2785716194cda67bad0cb6 (from https://pypi.org/simple/fragmenstein/), version: 0.6.3
2021-12-20T19:17:34,249   Found link https://files.pythonhosted.org/packages/ef/53/306ce7438a57b764d88968982f6a5dc9b4c69e83bd23a20d857040223368/Fragmenstein-0.6.4.tar.gz#sha256=f46068418a01abdca48d58e27071f2ae5bcd34f66de527e833e1040d492ca86f (from https://pypi.org/simple/fragmenstein/), version: 0.6.4
2021-12-20T19:17:34,250   Found link https://files.pythonhosted.org/packages/7a/16/dd9b834215d9b986894c991e28cb9111691401b52686f2f8d3b4503cd25e/Fragmenstein-0.6.5.tar.gz#sha256=f15566be1726c42db0bf0947a4fdb5ac60668cf78181354421289646df400b81 (from https://pypi.org/simple/fragmenstein/), version: 0.6.5
2021-12-20T19:17:34,251   Found link https://files.pythonhosted.org/packages/5c/e2/d2ca713c7a98e86580ca55c8cea3bd011aab570829eb7306bb76471f41f5/Fragmenstein-0.6.7.tar.gz#sha256=7bc5579fba97a279e6a7714de296448d12a70b1f4bf0c078318f4ee77d74c6f5 (from https://pypi.org/simple/fragmenstein/), version: 0.6.7
2021-12-20T19:17:34,251   Found link https://files.pythonhosted.org/packages/d3/de/18bb471456c5f660642b8df218f03631149c30947995eb4896b7fca4752d/Fragmenstein-0.6.8.tar.gz#sha256=485807bc0934f4d6beae6947b67c34f64a24f7a0f39a977dbc5ac7949d08fe89 (from https://pypi.org/simple/fragmenstein/), version: 0.6.8
2021-12-20T19:17:34,252   Found link https://files.pythonhosted.org/packages/b3/35/e2afdf14377e64b1a6104d704292b07fc1ce528912a722549c115eb036ad/Fragmenstein-0.6.10.tar.gz#sha256=7b03c6bf51659e874cbcbce8b5ca74cbc60104d3cf0e54373bf0ef66630448f0 (from https://pypi.org/simple/fragmenstein/), version: 0.6.10
2021-12-20T19:17:34,253 Fetching project page and analyzing links: https://www.piwheels.org/simple/fragmenstein/
2021-12-20T19:17:34,253 Getting page https://www.piwheels.org/simple/fragmenstein/
2021-12-20T19:17:34,255 Found index url https://www.piwheels.org/simple
2021-12-20T19:17:34,479   Skipping link: No binaries permitted for fragmenstein: https://www.piwheels.org/simple/fragmenstein/Fragmenstein-0.6-py3-none-any.whl#sha256=a066df758898ce62bb498e9000e9e60772360c4fba8b4c9b687e0fc1e535a5ca (from https://www.piwheels.org/simple/fragmenstein/)
2021-12-20T19:17:34,480   Skipping link: No binaries permitted for fragmenstein: https://www.piwheels.org/simple/fragmenstein/fragmenstein-0.6.1-py3-none-any.whl#sha256=0a434b2df199f1664c61f14d7307e316f5e1bd615eb3995fe740fa9b43567360 (from https://www.piwheels.org/simple/fragmenstein/)
2021-12-20T19:17:34,481   Skipping link: No binaries permitted for fragmenstein: https://www.piwheels.org/simple/fragmenstein/fragmenstein-0.6.2-py3-none-any.whl#sha256=06157e7aa034419ec24c936b586fee8801b66cd32017233c170a9e67aee89f93 (from https://www.piwheels.org/simple/fragmenstein/)
2021-12-20T19:17:34,481   Skipping link: No binaries permitted for fragmenstein: https://www.piwheels.org/simple/fragmenstein/fragmenstein-0.6.3-py3-none-any.whl#sha256=44918733ba0b1d6cd8179b2525562e84b5e8620385d5c36ad304d8ef005ddb9f (from https://www.piwheels.org/simple/fragmenstein/)
2021-12-20T19:17:34,482   Skipping link: No binaries permitted for fragmenstein: https://www.piwheels.org/simple/fragmenstein/Fragmenstein-0.6.4-py3-none-any.whl#sha256=fd2ae6f3f195d72cd1a89a6831ee0a23ab5edecc899e5cecef0663e5da21b3ed (from https://www.piwheels.org/simple/fragmenstein/)
2021-12-20T19:17:34,482   Skipping link: No binaries permitted for fragmenstein: https://www.piwheels.org/simple/fragmenstein/Fragmenstein-0.6.5-py3-none-any.whl#sha256=dc7956be0681793a1b114b9314d939e844ceefbe73c947332ed41160f87f4fb7 (from https://www.piwheels.org/simple/fragmenstein/)
2021-12-20T19:17:34,482   Skipping link: No binaries permitted for fragmenstein: https://www.piwheels.org/simple/fragmenstein/Fragmenstein-0.6.7-py3-none-any.whl#sha256=63fbcc65615bb01dbf461e7bada7ae323d78d0db76c04876bc510d2b449c65c8 (from https://www.piwheels.org/simple/fragmenstein/)
2021-12-20T19:17:34,483   Skipping link: No binaries permitted for fragmenstein: https://www.piwheels.org/simple/fragmenstein/Fragmenstein-0.6.8-py3-none-any.whl#sha256=105c4f74d89ac129d6ce2c540b954b0726b76789048aa6885e9fae20ad97c6f1 (from https://www.piwheels.org/simple/fragmenstein/)
2021-12-20T19:17:34,483 Skipping link: not a file: https://www.piwheels.org/simple/fragmenstein/
2021-12-20T19:17:34,484 Skipping link: not a file: https://pypi.org/simple/fragmenstein/
2021-12-20T19:17:34,519 Given no hashes to check 1 links for project 'fragmenstein': discarding no candidates
2021-12-20T19:17:34,549 Collecting fragmenstein==0.6.10
2021-12-20T19:17:34,552   Created temporary directory: /tmp/pip-unpack-abzms9aq
2021-12-20T19:17:34,657   Downloading Fragmenstein-0.6.10.tar.gz (85 kB)
2021-12-20T19:17:34,907   Added fragmenstein==0.6.10 from https://files.pythonhosted.org/packages/b3/35/e2afdf14377e64b1a6104d704292b07fc1ce528912a722549c115eb036ad/Fragmenstein-0.6.10.tar.gz#sha256=7b03c6bf51659e874cbcbce8b5ca74cbc60104d3cf0e54373bf0ef66630448f0 to build tracker '/tmp/pip-req-tracker-5ug4g8sv'
2021-12-20T19:17:34,909   Running setup.py (path:/tmp/pip-wheel-b901gbm2/fragmenstein_570a1397d6e94526aba0d7eef6af7df1/setup.py) egg_info for package fragmenstein
2021-12-20T19:17:34,910   Created temporary directory: /tmp/pip-pip-egg-info-fwi8pibo
2021-12-20T19:17:34,911   Preparing metadata (setup.py): started
2021-12-20T19:17:34,911   Running command python setup.py egg_info
2021-12-20T19:17:36,698   running egg_info
2021-12-20T19:17:36,703   creating /tmp/pip-pip-egg-info-fwi8pibo/Fragmenstein.egg-info
2021-12-20T19:17:36,705   writing /tmp/pip-pip-egg-info-fwi8pibo/Fragmenstein.egg-info/PKG-INFO
2021-12-20T19:17:36,708   writing dependency_links to /tmp/pip-pip-egg-info-fwi8pibo/Fragmenstein.egg-info/dependency_links.txt
2021-12-20T19:17:36,711   writing entry points to /tmp/pip-pip-egg-info-fwi8pibo/Fragmenstein.egg-info/entry_points.txt
2021-12-20T19:17:36,713   writing requirements to /tmp/pip-pip-egg-info-fwi8pibo/Fragmenstein.egg-info/requires.txt
2021-12-20T19:17:36,715   writing top-level names to /tmp/pip-pip-egg-info-fwi8pibo/Fragmenstein.egg-info/top_level.txt
2021-12-20T19:17:36,718   writing manifest file '/tmp/pip-pip-egg-info-fwi8pibo/Fragmenstein.egg-info/SOURCES.txt'
2021-12-20T19:17:36,752   reading manifest file '/tmp/pip-pip-egg-info-fwi8pibo/Fragmenstein.egg-info/SOURCES.txt'
2021-12-20T19:17:36,755   adding license file 'LICENSE'
2021-12-20T19:17:36,762   writing manifest file '/tmp/pip-pip-egg-info-fwi8pibo/Fragmenstein.egg-info/SOURCES.txt'
2021-12-20T19:17:36,764   /tmp/pip-wheel-b901gbm2/fragmenstein_570a1397d6e94526aba0d7eef6af7df1/setup.py:16: UserWarning: This 3.6+ script **requires** rdkit which ~cannot~ [could not] be pip installed. To install try either pip install rdkit-pypiconda install -c conda-forge rdkit or sudo apt-get/brew install python3-rdkit or visit rdkit documentation.
2021-12-20T19:17:36,765     'conda install -c conda-forge rdkit or ' +
2021-12-20T19:17:36,765   /tmp/pip-wheel-b901gbm2/fragmenstein_570a1397d6e94526aba0d7eef6af7df1/setup.py:20: UserWarning: The minimisation part of this code uses pyrosetta, which has to be downloaded from the Rosetta software site due to licencing. Without it only the classes Monster and Rectifier will work
2021-12-20T19:17:36,766     warn('The minimisation part of this code uses pyrosetta, which has to be downloaded from ' +
2021-12-20T19:17:36,766   /tmp/pip-wheel-b901gbm2/fragmenstein_570a1397d6e94526aba0d7eef6af7df1/setup.py:24: UserWarning: The module pymol2 is optionally required (conda or apt-get installable).
2021-12-20T19:17:36,766     warn('The module pymol2 is optionally required (conda or apt-get installable).')
2021-12-20T19:17:36,865   Preparing metadata (setup.py): finished with status 'done'
2021-12-20T19:17:36,873   Source in /tmp/pip-wheel-b901gbm2/fragmenstein_570a1397d6e94526aba0d7eef6af7df1 has version 0.6.10, which satisfies requirement fragmenstein==0.6.10 from https://files.pythonhosted.org/packages/b3/35/e2afdf14377e64b1a6104d704292b07fc1ce528912a722549c115eb036ad/Fragmenstein-0.6.10.tar.gz#sha256=7b03c6bf51659e874cbcbce8b5ca74cbc60104d3cf0e54373bf0ef66630448f0
2021-12-20T19:17:36,875   Removed fragmenstein==0.6.10 from https://files.pythonhosted.org/packages/b3/35/e2afdf14377e64b1a6104d704292b07fc1ce528912a722549c115eb036ad/Fragmenstein-0.6.10.tar.gz#sha256=7b03c6bf51659e874cbcbce8b5ca74cbc60104d3cf0e54373bf0ef66630448f0 from build tracker '/tmp/pip-req-tracker-5ug4g8sv'
2021-12-20T19:17:36,883 Created temporary directory: /tmp/pip-unpack-axeyq3_d
2021-12-20T19:17:36,884 Building wheels for collected packages: fragmenstein
2021-12-20T19:17:36,892   Created temporary directory: /tmp/pip-wheel-nz84__36
2021-12-20T19:17:36,893   Building wheel for fragmenstein (setup.py): started
2021-12-20T19:17:36,894   Destination directory: /tmp/pip-wheel-nz84__36
2021-12-20T19:17:36,894   Running command /usr/bin/python3 -u -c 'import io, os, sys, setuptools, tokenize; sys.argv[0] = '"'"'/tmp/pip-wheel-b901gbm2/fragmenstein_570a1397d6e94526aba0d7eef6af7df1/setup.py'"'"'; __file__='"'"'/tmp/pip-wheel-b901gbm2/fragmenstein_570a1397d6e94526aba0d7eef6af7df1/setup.py'"'"';f = getattr(tokenize, '"'"'open'"'"', open)(__file__) if os.path.exists(__file__) else io.StringIO('"'"'from setuptools import setup; setup()'"'"');code = f.read().replace('"'"'\r\n'"'"', '"'"'\n'"'"');f.close();exec(compile(code, __file__, '"'"'exec'"'"'))' bdist_wheel -d /tmp/pip-wheel-nz84__36
2021-12-20T19:17:38,292   /tmp/pip-wheel-b901gbm2/fragmenstein_570a1397d6e94526aba0d7eef6af7df1/setup.py:16: UserWarning: This 3.6+ script **requires** rdkit which ~cannot~ [could not] be pip installed. To install try either pip install rdkit-pypiconda install -c conda-forge rdkit or sudo apt-get/brew install python3-rdkit or visit rdkit documentation.
2021-12-20T19:17:38,293     'conda install -c conda-forge rdkit or ' +
2021-12-20T19:17:38,293   /tmp/pip-wheel-b901gbm2/fragmenstein_570a1397d6e94526aba0d7eef6af7df1/setup.py:20: UserWarning: The minimisation part of this code uses pyrosetta, which has to be downloaded from the Rosetta software site due to licencing. Without it only the classes Monster and Rectifier will work
2021-12-20T19:17:38,294     warn('The minimisation part of this code uses pyrosetta, which has to be downloaded from ' +
2021-12-20T19:17:38,294   /tmp/pip-wheel-b901gbm2/fragmenstein_570a1397d6e94526aba0d7eef6af7df1/setup.py:24: UserWarning: The module pymol2 is optionally required (conda or apt-get installable).
2021-12-20T19:17:38,295     warn('The module pymol2 is optionally required (conda or apt-get installable).')
2021-12-20T19:17:38,673   running bdist_wheel
2021-12-20T19:17:38,682   running build
2021-12-20T19:17:38,683   running build_py
2021-12-20T19:17:38,691   creating build
2021-12-20T19:17:38,691   creating build/lib
2021-12-20T19:17:38,692   creating build/lib/fragmenstein
2021-12-20T19:17:38,694   copying fragmenstein/__init__.py -> build/lib/fragmenstein
2021-12-20T19:17:38,697   copying fragmenstein/m_rmsd.py -> build/lib/fragmenstein
2021-12-20T19:17:38,703   creating build/lib/fragmenstein/cli
2021-12-20T19:17:38,704   copying fragmenstein/cli/__init__.py -> build/lib/fragmenstein/cli
2021-12-20T19:17:38,709   creating build/lib/fragmenstein/igor
2021-12-20T19:17:38,711   copying fragmenstein/igor/_igor_min.py -> build/lib/fragmenstein/igor
2021-12-20T19:17:38,715   copying fragmenstein/igor/__init__.py -> build/lib/fragmenstein/igor
2021-12-20T19:17:38,719   copying fragmenstein/igor/_igor_init.py -> build/lib/fragmenstein/igor
2021-12-20T19:17:38,722   copying fragmenstein/igor/_igor_utils.py -> build/lib/fragmenstein/igor
2021-12-20T19:17:38,728   creating build/lib/fragmenstein/victor
2021-12-20T19:17:38,730   copying fragmenstein/victor/_victor_journal.py -> build/lib/fragmenstein/victor
2021-12-20T19:17:38,734   copying fragmenstein/victor/__init__.py -> build/lib/fragmenstein/victor
2021-12-20T19:17:38,738   copying fragmenstein/victor/_victor_plonk.py -> build/lib/fragmenstein/victor
2021-12-20T19:17:38,742   copying fragmenstein/victor/_victor_common.py -> build/lib/fragmenstein/victor
2021-12-20T19:17:38,746   copying fragmenstein/victor/_victor_combine.py -> build/lib/fragmenstein/victor
2021-12-20T19:17:38,750   copying fragmenstein/victor/_victor_store.py -> build/lib/fragmenstein/victor
2021-12-20T19:17:38,754   copying fragmenstein/victor/_victor_utils.py -> build/lib/fragmenstein/victor
2021-12-20T19:17:38,760   copying fragmenstein/victor/_loggerwriter.py -> build/lib/fragmenstein/victor
2021-12-20T19:17:38,763   copying fragmenstein/victor/_victor_base.py -> build/lib/fragmenstein/victor
2021-12-20T19:17:38,767   copying fragmenstein/victor/_victor_validate.py -> build/lib/fragmenstein/victor
2021-12-20T19:17:38,771   copying fragmenstein/victor/_victor_place.py -> build/lib/fragmenstein/victor
2021-12-20T19:17:38,774   copying fragmenstein/victor/_victor_igor.py -> build/lib/fragmenstein/victor
2021-12-20T19:17:38,778   copying fragmenstein/victor/minimalPDB.py -> build/lib/fragmenstein/victor
2021-12-20T19:17:38,782   copying fragmenstein/victor/_victor_overridables.py -> build/lib/fragmenstein/victor
2021-12-20T19:17:38,785   copying fragmenstein/victor/_victor_safety.py -> build/lib/fragmenstein/victor
2021-12-20T19:17:38,789   creating build/lib/fragmenstein/mpro
2021-12-20T19:17:38,791   copying fragmenstein/mpro/__init__.py -> build/lib/fragmenstein/mpro
2021-12-20T19:17:38,797   creating build/lib/fragmenstein/monster
2021-12-20T19:17:38,798   copying fragmenstein/monster/unmerge_mapper.py -> build/lib/fragmenstein/monster
2021-12-20T19:17:38,803   copying fragmenstein/monster/__init__.py -> build/lib/fragmenstein/monster
2021-12-20T19:17:38,807   copying fragmenstein/monster/_combine.py -> build/lib/fragmenstein/monster
2021-12-20T19:17:38,810   copying fragmenstein/monster/_blend_place.py -> build/lib/fragmenstein/monster
2021-12-20T19:17:38,815   copying fragmenstein/monster/positional_mapping.py -> build/lib/fragmenstein/monster
2021-12-20T19:17:38,819   copying fragmenstein/monster/_base.py -> build/lib/fragmenstein/monster
2021-12-20T19:17:38,823   copying fragmenstein/monster/_modification_logging.py -> build/lib/fragmenstein/monster
2021-12-20T19:17:38,826   copying fragmenstein/monster/bond_provenance.py -> build/lib/fragmenstein/monster
2021-12-20T19:17:38,830   copying fragmenstein/monster/_communal.py -> build/lib/fragmenstein/monster
2021-12-20T19:17:38,835   copying fragmenstein/monster/_place.py -> build/lib/fragmenstein/monster
2021-12-20T19:17:38,838   copying fragmenstein/monster/_collapse_ring.py -> build/lib/fragmenstein/monster
2021-12-20T19:17:38,844   copying fragmenstein/monster/_utility.py -> build/lib/fragmenstein/monster
2021-12-20T19:17:38,848   copying fragmenstein/monster/_merge.py -> build/lib/fragmenstein/monster
2021-12-20T19:17:38,852   copying fragmenstein/monster/_join_neighboring.py -> build/lib/fragmenstein/monster
2021-12-20T19:17:38,857   creating build/lib/fragmenstein/laboratory
2021-12-20T19:17:38,858   copying fragmenstein/laboratory/__init__.py -> build/lib/fragmenstein/laboratory
2021-12-20T19:17:38,862   copying fragmenstein/laboratory/_process.py -> build/lib/fragmenstein/laboratory
2021-12-20T19:17:38,865   copying fragmenstein/laboratory/make_pyrosetta_options.py -> build/lib/fragmenstein/laboratory
2021-12-20T19:17:38,868   copying fragmenstein/laboratory/laboratory.py -> build/lib/fragmenstein/laboratory
2021-12-20T19:17:38,872   creating build/lib/fragmenstein/mpro/data
2021-12-20T19:17:38,874   copying fragmenstein/mpro/data/__init__.py -> build/lib/fragmenstein/mpro/data
2021-12-20T19:17:38,878   creating build/lib/fragmenstein/mpro/data/hit_mols
2021-12-20T19:17:38,880   copying fragmenstein/mpro/data/hit_mols/__init__.py -> build/lib/fragmenstein/mpro/data/hit_mols
2021-12-20T19:17:38,882   running egg_info
2021-12-20T19:17:38,905   writing Fragmenstein.egg-info/PKG-INFO
2021-12-20T19:17:38,908   writing dependency_links to Fragmenstein.egg-info/dependency_links.txt
2021-12-20T19:17:38,911   writing entry points to Fragmenstein.egg-info/entry_points.txt
2021-12-20T19:17:38,913   writing requirements to Fragmenstein.egg-info/requires.txt
2021-12-20T19:17:38,915   writing top-level names to Fragmenstein.egg-info/top_level.txt
2021-12-20T19:17:38,940   reading manifest file 'Fragmenstein.egg-info/SOURCES.txt'
2021-12-20T19:17:38,945   adding license file 'LICENSE'
2021-12-20T19:17:38,955   writing manifest file 'Fragmenstein.egg-info/SOURCES.txt'
2021-12-20T19:17:38,977   /usr/local/lib/python3.7/dist-packages/setuptools/command/install.py:37: SetuptoolsDeprecationWarning: setup.py install is deprecated. Use build and pip and other standards-based tools.
2021-12-20T19:17:38,977     setuptools.SetuptoolsDeprecationWarning,
2021-12-20T19:17:38,981   installing to build/bdist.linux-armv7l/wheel
2021-12-20T19:17:38,982   running install
2021-12-20T19:17:38,984   running install_lib
2021-12-20T19:17:38,990   creating build/bdist.linux-armv7l
2021-12-20T19:17:38,991   creating build/bdist.linux-armv7l/wheel
2021-12-20T19:17:38,994   creating build/bdist.linux-armv7l/wheel/fragmenstein
2021-12-20T19:17:38,996   copying build/lib/fragmenstein/__init__.py -> build/bdist.linux-armv7l/wheel/fragmenstein
2021-12-20T19:17:39,000   creating build/bdist.linux-armv7l/wheel/fragmenstein/cli
2021-12-20T19:17:39,002   copying build/lib/fragmenstein/cli/__init__.py -> build/bdist.linux-armv7l/wheel/fragmenstein/cli
2021-12-20T19:17:39,005   copying build/lib/fragmenstein/m_rmsd.py -> build/bdist.linux-armv7l/wheel/fragmenstein
2021-12-20T19:17:39,011   creating build/bdist.linux-armv7l/wheel/fragmenstein/igor
2021-12-20T19:17:39,012   copying build/lib/fragmenstein/igor/_igor_min.py -> build/bdist.linux-armv7l/wheel/fragmenstein/igor
2021-12-20T19:17:39,017   copying build/lib/fragmenstein/igor/__init__.py -> build/bdist.linux-armv7l/wheel/fragmenstein/igor
2021-12-20T19:17:39,020   copying build/lib/fragmenstein/igor/_igor_init.py -> build/bdist.linux-armv7l/wheel/fragmenstein/igor
2021-12-20T19:17:39,024   copying build/lib/fragmenstein/igor/_igor_utils.py -> build/bdist.linux-armv7l/wheel/fragmenstein/igor
2021-12-20T19:17:39,029   creating build/bdist.linux-armv7l/wheel/fragmenstein/victor
2021-12-20T19:17:39,030   copying build/lib/fragmenstein/victor/_victor_journal.py -> build/bdist.linux-armv7l/wheel/fragmenstein/victor
2021-12-20T19:17:39,034   copying build/lib/fragmenstein/victor/__init__.py -> build/bdist.linux-armv7l/wheel/fragmenstein/victor
2021-12-20T19:17:39,038   copying build/lib/fragmenstein/victor/_victor_plonk.py -> build/bdist.linux-armv7l/wheel/fragmenstein/victor
2021-12-20T19:17:39,042   copying build/lib/fragmenstein/victor/_victor_common.py -> build/bdist.linux-armv7l/wheel/fragmenstein/victor
2021-12-20T19:17:39,046   copying build/lib/fragmenstein/victor/_victor_combine.py -> build/bdist.linux-armv7l/wheel/fragmenstein/victor
2021-12-20T19:17:39,050   copying build/lib/fragmenstein/victor/_victor_store.py -> build/bdist.linux-armv7l/wheel/fragmenstein/victor
2021-12-20T19:17:39,054   copying build/lib/fragmenstein/victor/_victor_utils.py -> build/bdist.linux-armv7l/wheel/fragmenstein/victor
2021-12-20T19:17:39,059   copying build/lib/fragmenstein/victor/_loggerwriter.py -> build/bdist.linux-armv7l/wheel/fragmenstein/victor
2021-12-20T19:17:39,062   copying build/lib/fragmenstein/victor/_victor_base.py -> build/bdist.linux-armv7l/wheel/fragmenstein/victor
2021-12-20T19:17:39,066   copying build/lib/fragmenstein/victor/_victor_validate.py -> build/bdist.linux-armv7l/wheel/fragmenstein/victor
2021-12-20T19:17:39,070   copying build/lib/fragmenstein/victor/_victor_place.py -> build/bdist.linux-armv7l/wheel/fragmenstein/victor
2021-12-20T19:17:39,073   copying build/lib/fragmenstein/victor/_victor_igor.py -> build/bdist.linux-armv7l/wheel/fragmenstein/victor
2021-12-20T19:17:39,077   copying build/lib/fragmenstein/victor/minimalPDB.py -> build/bdist.linux-armv7l/wheel/fragmenstein/victor
2021-12-20T19:17:39,081   copying build/lib/fragmenstein/victor/_victor_overridables.py -> build/bdist.linux-armv7l/wheel/fragmenstein/victor
2021-12-20T19:17:39,084   copying build/lib/fragmenstein/victor/_victor_safety.py -> build/bdist.linux-armv7l/wheel/fragmenstein/victor
2021-12-20T19:17:39,088   creating build/bdist.linux-armv7l/wheel/fragmenstein/mpro
2021-12-20T19:17:39,089   copying build/lib/fragmenstein/mpro/__init__.py -> build/bdist.linux-armv7l/wheel/fragmenstein/mpro
2021-12-20T19:17:39,094   creating build/bdist.linux-armv7l/wheel/fragmenstein/mpro/data
2021-12-20T19:17:39,096   copying build/lib/fragmenstein/mpro/data/__init__.py -> build/bdist.linux-armv7l/wheel/fragmenstein/mpro/data
2021-12-20T19:17:39,101   creating build/bdist.linux-armv7l/wheel/fragmenstein/mpro/data/hit_mols
2021-12-20T19:17:39,102   copying build/lib/fragmenstein/mpro/data/hit_mols/__init__.py -> build/bdist.linux-armv7l/wheel/fragmenstein/mpro/data/hit_mols
2021-12-20T19:17:39,106   creating build/bdist.linux-armv7l/wheel/fragmenstein/monster
2021-12-20T19:17:39,107   copying build/lib/fragmenstein/monster/unmerge_mapper.py -> build/bdist.linux-armv7l/wheel/fragmenstein/monster
2021-12-20T19:17:39,112   copying build/lib/fragmenstein/monster/__init__.py -> build/bdist.linux-armv7l/wheel/fragmenstein/monster
2021-12-20T19:17:39,116   copying build/lib/fragmenstein/monster/_combine.py -> build/bdist.linux-armv7l/wheel/fragmenstein/monster
2021-12-20T19:17:39,119   copying build/lib/fragmenstein/monster/_blend_place.py -> build/bdist.linux-armv7l/wheel/fragmenstein/monster
2021-12-20T19:17:39,124   copying build/lib/fragmenstein/monster/positional_mapping.py -> build/bdist.linux-armv7l/wheel/fragmenstein/monster
2021-12-20T19:17:39,128   copying build/lib/fragmenstein/monster/_base.py -> build/bdist.linux-armv7l/wheel/fragmenstein/monster
2021-12-20T19:17:39,132   copying build/lib/fragmenstein/monster/_modification_logging.py -> build/bdist.linux-armv7l/wheel/fragmenstein/monster
2021-12-20T19:17:39,135   copying build/lib/fragmenstein/monster/bond_provenance.py -> build/bdist.linux-armv7l/wheel/fragmenstein/monster
2021-12-20T19:17:39,139   copying build/lib/fragmenstein/monster/_communal.py -> build/bdist.linux-armv7l/wheel/fragmenstein/monster
2021-12-20T19:17:39,144   copying build/lib/fragmenstein/monster/_place.py -> build/bdist.linux-armv7l/wheel/fragmenstein/monster
2021-12-20T19:17:39,147   copying build/lib/fragmenstein/monster/_collapse_ring.py -> build/bdist.linux-armv7l/wheel/fragmenstein/monster
2021-12-20T19:17:39,154   copying build/lib/fragmenstein/monster/_utility.py -> build/bdist.linux-armv7l/wheel/fragmenstein/monster
2021-12-20T19:17:39,159   copying build/lib/fragmenstein/monster/_merge.py -> build/bdist.linux-armv7l/wheel/fragmenstein/monster
2021-12-20T19:17:39,163   copying build/lib/fragmenstein/monster/_join_neighboring.py -> build/bdist.linux-armv7l/wheel/fragmenstein/monster
2021-12-20T19:17:39,168   creating build/bdist.linux-armv7l/wheel/fragmenstein/laboratory
2021-12-20T19:17:39,169   copying build/lib/fragmenstein/laboratory/__init__.py -> build/bdist.linux-armv7l/wheel/fragmenstein/laboratory
2021-12-20T19:17:39,173   copying build/lib/fragmenstein/laboratory/_process.py -> build/bdist.linux-armv7l/wheel/fragmenstein/laboratory
2021-12-20T19:17:39,176   copying build/lib/fragmenstein/laboratory/make_pyrosetta_options.py -> build/bdist.linux-armv7l/wheel/fragmenstein/laboratory
2021-12-20T19:17:39,179   copying build/lib/fragmenstein/laboratory/laboratory.py -> build/bdist.linux-armv7l/wheel/fragmenstein/laboratory
2021-12-20T19:17:39,183   running install_egg_info
2021-12-20T19:17:39,198   Copying Fragmenstein.egg-info to build/bdist.linux-armv7l/wheel/Fragmenstein-0.6.10-py3.7.egg-info
2021-12-20T19:17:39,221   running install_scripts
2021-12-20T19:17:39,377   adding license file "LICENSE" (matched pattern "LICEN[CS]E*")
2021-12-20T19:17:39,385   creating build/bdist.linux-armv7l/wheel/Fragmenstein-0.6.10.dist-info/WHEEL
2021-12-20T19:17:39,389   creating '/tmp/pip-wheel-nz84__36/Fragmenstein-0.6.10-py3-none-any.whl' and adding 'build/bdist.linux-armv7l/wheel' to it
2021-12-20T19:17:39,396   adding 'fragmenstein/__init__.py'
2021-12-20T19:17:39,400   adding 'fragmenstein/m_rmsd.py'
2021-12-20T19:17:39,404   adding 'fragmenstein/cli/__init__.py'
2021-12-20T19:17:39,408   adding 'fragmenstein/igor/__init__.py'
2021-12-20T19:17:39,411   adding 'fragmenstein/igor/_igor_init.py'
2021-12-20T19:17:39,416   adding 'fragmenstein/igor/_igor_min.py'
2021-12-20T19:17:39,419   adding 'fragmenstein/igor/_igor_utils.py'
2021-12-20T19:17:39,422   adding 'fragmenstein/laboratory/__init__.py'
2021-12-20T19:17:39,424   adding 'fragmenstein/laboratory/_process.py'
2021-12-20T19:17:39,427   adding 'fragmenstein/laboratory/laboratory.py'
2021-12-20T19:17:39,429   adding 'fragmenstein/laboratory/make_pyrosetta_options.py'
2021-12-20T19:17:39,433   adding 'fragmenstein/monster/__init__.py'
2021-12-20T19:17:39,437   adding 'fragmenstein/monster/_base.py'
2021-12-20T19:17:39,444   adding 'fragmenstein/monster/_blend_place.py'
2021-12-20T19:17:39,459   adding 'fragmenstein/monster/_collapse_ring.py'
2021-12-20T19:17:39,462   adding 'fragmenstein/monster/_combine.py'
2021-12-20T19:17:39,467   adding 'fragmenstein/monster/_communal.py'
2021-12-20T19:17:39,470   adding 'fragmenstein/monster/_join_neighboring.py'
2021-12-20T19:17:39,475   adding 'fragmenstein/monster/_merge.py'
2021-12-20T19:17:39,477   adding 'fragmenstein/monster/_modification_logging.py'
2021-12-20T19:17:39,480   adding 'fragmenstein/monster/_place.py'
2021-12-20T19:17:39,485   adding 'fragmenstein/monster/_utility.py'
2021-12-20T19:17:39,487   adding 'fragmenstein/monster/bond_provenance.py'
2021-12-20T19:17:39,490   adding 'fragmenstein/monster/positional_mapping.py'
2021-12-20T19:17:39,495   adding 'fragmenstein/monster/unmerge_mapper.py'
2021-12-20T19:17:39,499   adding 'fragmenstein/mpro/__init__.py'
2021-12-20T19:17:39,503   adding 'fragmenstein/mpro/data/__init__.py'
2021-12-20T19:17:39,505   adding 'fragmenstein/mpro/data/hit_mols/__init__.py'
2021-12-20T19:17:39,510   adding 'fragmenstein/victor/__init__.py'
2021-12-20T19:17:39,512   adding 'fragmenstein/victor/_loggerwriter.py'
2021-12-20T19:17:39,515   adding 'fragmenstein/victor/_victor_base.py'
2021-12-20T19:17:39,518   adding 'fragmenstein/victor/_victor_combine.py'
2021-12-20T19:17:39,523   adding 'fragmenstein/victor/_victor_common.py'
2021-12-20T19:17:39,526   adding 'fragmenstein/victor/_victor_igor.py'
2021-12-20T19:17:39,528   adding 'fragmenstein/victor/_victor_journal.py'
2021-12-20T19:17:39,530   adding 'fragmenstein/victor/_victor_overridables.py'
2021-12-20T19:17:39,533   adding 'fragmenstein/victor/_victor_place.py'
2021-12-20T19:17:39,536   adding 'fragmenstein/victor/_victor_plonk.py'
2021-12-20T19:17:39,538   adding 'fragmenstein/victor/_victor_safety.py'
2021-12-20T19:17:39,541   adding 'fragmenstein/victor/_victor_store.py'
2021-12-20T19:17:39,547   adding 'fragmenstein/victor/_victor_utils.py'
2021-12-20T19:17:39,550   adding 'fragmenstein/victor/_victor_validate.py'
2021-12-20T19:17:39,552   adding 'fragmenstein/victor/minimalPDB.py'
2021-12-20T19:17:39,554   adding 'Fragmenstein-0.6.10.dist-info/LICENSE'
2021-12-20T19:17:39,556   adding 'Fragmenstein-0.6.10.dist-info/METADATA'
2021-12-20T19:17:39,557   adding 'Fragmenstein-0.6.10.dist-info/WHEEL'
2021-12-20T19:17:39,559   adding 'Fragmenstein-0.6.10.dist-info/entry_points.txt'
2021-12-20T19:17:39,560   adding 'Fragmenstein-0.6.10.dist-info/top_level.txt'
2021-12-20T19:17:39,562   adding 'Fragmenstein-0.6.10.dist-info/RECORD'
2021-12-20T19:17:39,569   removing build/bdist.linux-armv7l/wheel
2021-12-20T19:17:39,715   Building wheel for fragmenstein (setup.py): finished with status 'done'
2021-12-20T19:17:39,722   Created wheel for fragmenstein: filename=Fragmenstein-0.6.10-py3-none-any.whl size=103540 sha256=c81a4ce4083e3c2949820ec4f9a2052f91d107ee5803625c1395eb37662c3f65
2021-12-20T19:17:39,722   Stored in directory: /tmp/pip-ephem-wheel-cache-j_5wj3es/wheels/f2/33/9f/06622f905c377fbb9b95b907f82239f4f372402cf12664299b
2021-12-20T19:17:39,746 Successfully built fragmenstein
2021-12-20T19:17:39,761 Removed build tracker: '/tmp/pip-req-tracker-5ug4g8sv'