2021-12-23T02:54:33,434 Created temporary directory: /tmp/pip-ephem-wheel-cache-tn3zmy2p 2021-12-23T02:54:33,440 Created temporary directory: /tmp/pip-req-tracker-8c7ipfea 2021-12-23T02:54:33,441 Initialized build tracking at /tmp/pip-req-tracker-8c7ipfea 2021-12-23T02:54:33,441 Created build tracker: /tmp/pip-req-tracker-8c7ipfea 2021-12-23T02:54:33,441 Entered build tracker: /tmp/pip-req-tracker-8c7ipfea 2021-12-23T02:54:33,442 Created temporary directory: /tmp/pip-wheel-_zix_e5o 2021-12-23T02:54:33,513 Looking in indexes: https://pypi.org/simple, https://www.piwheels.org/simple 2021-12-23T02:54:33,518 2 location(s) to search for versions of evatool: 2021-12-23T02:54:33,518 * https://pypi.org/simple/evatool/ 2021-12-23T02:54:33,518 * https://www.piwheels.org/simple/evatool/ 2021-12-23T02:54:33,519 Fetching project page and analyzing links: https://pypi.org/simple/evatool/ 2021-12-23T02:54:33,521 Getting page https://pypi.org/simple/evatool/ 2021-12-23T02:54:33,524 Found index url https://pypi.org/simple 2021-12-23T02:54:33,742 Skipping link: No binaries permitted for evatool: https://files.pythonhosted.org/packages/60/e2/17eae3995582dfe47a1d5b0ae17239819b824a4e0b9bf14ca4bda76663a4/evatool-0.1.7-py3-none-any.whl#sha256=6ed4441373f572fa0a32a1ae983dcbeef16b9df026c54ac5820d09a9ec926248 (from https://pypi.org/simple/evatool/) (requires-python:>=3.5) 2021-12-23T02:54:33,744 Found link https://files.pythonhosted.org/packages/85/e8/51de381593fa22616e386469ace06f30555e579c2699241daa99f2c529fe/evatool-0.1.7.tar.gz#sha256=2aab11bc60fa77dc4f6f77208ee779658d5637d764bb8a757695cb21de33be65 (from https://pypi.org/simple/evatool/) (requires-python:>=3.5), version: 0.1.7 2021-12-23T02:54:33,744 Skipping link: No binaries permitted for evatool: https://files.pythonhosted.org/packages/60/08/4c0a8e530279728ce81dba5abdd902ef20b15d4ededf1e99542d99992244/evatool-0.1.8-py3-none-any.whl#sha256=6e72b78952a543fdb36af73dbd9f993d5d5a351a3988de1e807e14b1edb96839 (from https://pypi.org/simple/evatool/) (requires-python:>=3.5) 2021-12-23T02:54:33,746 Found link https://files.pythonhosted.org/packages/3e/ab/d596be144189a73e2db2e5898a15d2872dd452a4bc4646e7216a246a2c12/evatool-0.1.8.tar.gz#sha256=c2e01d036086aadbe8184ded37118738a5af0e81139886b0a88f2d41da8016c3 (from https://pypi.org/simple/evatool/) (requires-python:>=3.5), version: 0.1.8 2021-12-23T02:54:33,746 Skipping link: No binaries permitted for evatool: https://files.pythonhosted.org/packages/5e/05/b23629e11097e1290fe23de283850208d9273da7d0c67831cb56a854343a/evatool-0.1.9-py3-none-any.whl#sha256=559aab9984e62764599cd0fe16c6e36b40c6e8fc1538ddd8edec9e8cf8d67f9f (from https://pypi.org/simple/evatool/) (requires-python:>=3.5) 2021-12-23T02:54:33,748 Found link https://files.pythonhosted.org/packages/a4/ec/37afbe66d5c524a5c7e241d40b3782dd54899ce6de810cb85381e56c1a64/evatool-0.1.9.tar.gz#sha256=be3e065acbfbc65da19609b5130859c4bcc141721abe3ce2fde50f44845f3305 (from https://pypi.org/simple/evatool/) (requires-python:>=3.5), version: 0.1.9 2021-12-23T02:54:33,749 Skipping link: No binaries permitted for evatool: https://files.pythonhosted.org/packages/a2/fc/25f893564910fc68ca570bdfd85c5390cc0efea24e0ed04d5bc3d62b80da/evatool-0.1.10-py3-none-any.whl#sha256=c992ca873a96a2c37d920fb8fba597e420c182a3983504271597b252c3e68850 (from https://pypi.org/simple/evatool/) (requires-python:>=3.5) 2021-12-23T02:54:33,751 Found link https://files.pythonhosted.org/packages/15/13/8697203b01608be387a4ba23504896273dcc8a096b050a1d2b2aac73c796/evatool-0.1.10.tar.gz#sha256=8466a6e1a267fc008e3a3b1601a92d3c78f1ef888a45d006952b514310588bea (from https://pypi.org/simple/evatool/) (requires-python:>=3.5), version: 0.1.10 2021-12-23T02:54:33,752 Skipping link: No binaries permitted for evatool: https://files.pythonhosted.org/packages/52/98/025f1fa3c8e989505e915ac6cfed2baae36aaba8e0ee7289fd30dfe9e936/evatool-0.1.11-py3-none-any.whl#sha256=8c07cdd19af3cbc903b450854c9d9efa19f5ab2416b99a6e0db9f6318dd18637 (from https://pypi.org/simple/evatool/) (requires-python:>=3.5) 2021-12-23T02:54:33,753 Found link https://files.pythonhosted.org/packages/3e/08/be3ecfd98a752bbde6153b332cdca4ca18f27ca196421ae054562657673c/evatool-0.1.11.tar.gz#sha256=f70758567a1a70889cb25d8a9b99e96483402a168ae2d5a3ef5ed84de9c5b0e2 (from https://pypi.org/simple/evatool/) (requires-python:>=3.5), version: 0.1.11 2021-12-23T02:54:33,754 Skipping link: No binaries permitted for evatool: https://files.pythonhosted.org/packages/de/e3/567fcddeddf1baaa449ebb446af3ff5b865900bfbe6292037f7a6de7818d/evatool-0.1.12-py3-none-any.whl#sha256=719f3516c8a57dbe7ab819f73f356d32338143cac2f1576d858f6d1e09094cd1 (from https://pypi.org/simple/evatool/) (requires-python:>=3.5) 2021-12-23T02:54:33,755 Found link https://files.pythonhosted.org/packages/8f/16/c8c2ddc58c1836e041d76a8e82b7cfe24f24d5d3218ed121d1749099f703/evatool-0.1.12.tar.gz#sha256=c4df8b8726cba529d6adf1553ff0eb9025cb7364f5cfff4b4ec7f30a235fdb3a (from https://pypi.org/simple/evatool/) (requires-python:>=3.5), version: 0.1.12 2021-12-23T02:54:33,756 Skipping link: No binaries permitted for evatool: https://files.pythonhosted.org/packages/96/b2/ec17a12dde5d12736ef83a0ca1ccde363bb228bb2c7f0abd9c196da9b42c/evatool-0.1.13-py3-none-any.whl#sha256=c0f174225617096059a29a131722e812e09c21456e4c2e7bca201b27f1853ecb (from https://pypi.org/simple/evatool/) (requires-python:>=3.5) 2021-12-23T02:54:33,757 Found link https://files.pythonhosted.org/packages/a5/4b/bcd8ad863a67a06fa6eaa6e9d65f13c08210ebb94fcc52d508acdab69c59/evatool-0.1.13.tar.gz#sha256=4945d2d596edd631c56aa280696ccdf91cd7a23eeda44d801cab38f053805e20 (from https://pypi.org/simple/evatool/) (requires-python:>=3.5), version: 0.1.13 2021-12-23T02:54:33,758 Skipping link: No binaries permitted for evatool: https://files.pythonhosted.org/packages/8f/e5/e5a9b899761a6d2fbc803ccc5eef0ee04baedaf67090a8ac20760aeeee2e/evatool-0.1.14-py3-none-any.whl#sha256=5b1c1f70e9769ca875454ae4c1e08473879dbc8400562f0555b40f90a6d5388f (from https://pypi.org/simple/evatool/) (requires-python:>=3.5) 2021-12-23T02:54:33,759 Found link https://files.pythonhosted.org/packages/79/2e/41a1c9da683aa9089734777485801a0fadc741deb0e23b24c4b61381a1c6/evatool-0.1.14.tar.gz#sha256=33369c22d3ed30bae5fb41eca7efd201a184b2f9f7a92f5baaefea42f23ab834 (from https://pypi.org/simple/evatool/) (requires-python:>=3.5), version: 0.1.14 2021-12-23T02:54:33,760 Fetching project page and analyzing links: https://www.piwheels.org/simple/evatool/ 2021-12-23T02:54:33,761 Getting page https://www.piwheels.org/simple/evatool/ 2021-12-23T02:54:33,763 Found index url https://www.piwheels.org/simple 2021-12-23T02:54:33,994 Skipping link: No binaries permitted for evatool: https://www.piwheels.org/simple/evatool/evatool-0.1.10-py3-none-any.whl#sha256=d9a36d451de5384ab39339fed153fc79807f013be338c70bc7290ba820649833 (from https://www.piwheels.org/simple/evatool/) (requires-python:>=3.5) 2021-12-23T02:54:33,995 Skipping link: No binaries permitted for evatool: https://www.piwheels.org/simple/evatool/evatool-0.1.11-py3-none-any.whl#sha256=be98ee0ee7dc4cf76948090ab3c82c5bf4fcc1a5e1435a8c1fe17ff44845d47f (from https://www.piwheels.org/simple/evatool/) (requires-python:>=3.5) 2021-12-23T02:54:33,995 Skipping link: No binaries permitted for evatool: https://www.piwheels.org/simple/evatool/evatool-0.1.12-py3-none-any.whl#sha256=121a895115279d52d137fc16d5113206276964ed72f185efe0022c3f170f47ea (from https://www.piwheels.org/simple/evatool/) (requires-python:>=3.5) 2021-12-23T02:54:33,996 Skipping link: No binaries permitted for evatool: https://www.piwheels.org/simple/evatool/evatool-0.1.13-py3-none-any.whl#sha256=59e7774f7caae3dbbf7690468362d6b1fa4c3804fb8468f799ee7ef4c1ef0367 (from https://www.piwheels.org/simple/evatool/) (requires-python:>=3.5) 2021-12-23T02:54:33,996 Skipping link: No binaries permitted for evatool: https://www.piwheels.org/simple/evatool/evatool-0.1.7-py3-none-any.whl#sha256=643671af2c103865f1e03289c73a9a8e9181191d1e40886e393f3f7af204d252 (from https://www.piwheels.org/simple/evatool/) (requires-python:>=3.5) 2021-12-23T02:54:33,997 Skipping link: No binaries permitted for evatool: https://www.piwheels.org/simple/evatool/evatool-0.1.8-py3-none-any.whl#sha256=d8420f8a6bd687137d27febd5bd5961b66ed306290f411228203ebdd612185f5 (from https://www.piwheels.org/simple/evatool/) (requires-python:>=3.5) 2021-12-23T02:54:33,997 Skipping link: No binaries permitted for evatool: https://www.piwheels.org/simple/evatool/evatool-0.1.9-py3-none-any.whl#sha256=16a78c2aaed7c17d48690a5c6dda3f85823db9897320e9a9db159b6a0a8b02ea (from https://www.piwheels.org/simple/evatool/) (requires-python:>=3.5) 2021-12-23T02:54:33,998 Skipping link: not a file: https://www.piwheels.org/simple/evatool/ 2021-12-23T02:54:33,998 Skipping link: not a file: https://pypi.org/simple/evatool/ 2021-12-23T02:54:34,033 Given no hashes to check 1 links for project 'evatool': discarding no candidates 2021-12-23T02:54:34,062 Collecting evatool==0.1.14 2021-12-23T02:54:34,065 Created temporary directory: /tmp/pip-unpack-9v3a5_5i 2021-12-23T02:54:34,154 Downloading evatool-0.1.14.tar.gz (54.8 MB) 2021-12-23T02:55:03,909 Added evatool==0.1.14 from https://files.pythonhosted.org/packages/79/2e/41a1c9da683aa9089734777485801a0fadc741deb0e23b24c4b61381a1c6/evatool-0.1.14.tar.gz#sha256=33369c22d3ed30bae5fb41eca7efd201a184b2f9f7a92f5baaefea42f23ab834 to build tracker '/tmp/pip-req-tracker-8c7ipfea' 2021-12-23T02:55:03,918 Created temporary directory: /tmp/pip-build-env-3wonwul1 2021-12-23T02:55:03,932 Created temporary directory: /tmp/pip-standalone-pip-3hz6buhj 2021-12-23T02:55:05,682 Installing build dependencies: started 2021-12-23T02:55:05,683 Running command /usr/bin/python3 /tmp/pip-standalone-pip-3hz6buhj/__env_pip__.zip/pip install --ignore-installed --no-user --prefix /tmp/pip-build-env-3wonwul1/overlay --no-warn-script-location -v --no-binary evatool --only-binary :none: -i https://pypi.org/simple --extra-index-url https://www.piwheels.org/simple --prefer-binary -- setuptools wheel 2021-12-23T02:55:13,523 Using pip 21.3.1 from /tmp/pip-standalone-pip-3hz6buhj/__env_pip__.zip/pip (python 3.7) 2021-12-23T02:55:14,290 Looking in indexes: https://pypi.org/simple, https://www.piwheels.org/simple 2021-12-23T02:55:19,325 Collecting setuptools 2021-12-23T02:55:19,547 Using cached https://www.piwheels.org/simple/setuptools/setuptools-60.0.4-py3-none-any.whl (952 kB) 2021-12-23T02:55:20,275 Collecting wheel 2021-12-23T02:55:20,310 Using cached https://www.piwheels.org/simple/wheel/wheel-0.37.1-py2.py3-none-any.whl (35 kB) 2021-12-23T02:55:23,964 Installing collected packages: wheel, setuptools 2021-12-23T02:55:24,216 Creating /tmp/pip-build-env-3wonwul1/overlay/bin 2021-12-23T02:55:24,218 changing mode of /tmp/pip-build-env-3wonwul1/overlay/bin/wheel to 755 2021-12-23T02:55:27,275 Successfully installed setuptools-60.0.4 wheel-0.37.1 2021-12-23T02:55:27,825 Installing build dependencies: finished with status 'done' 2021-12-23T02:55:27,846 Getting requirements to build wheel: started 2021-12-23T02:55:27,846 Running command /usr/bin/python3 /usr/local/lib/python3.7/dist-packages/pip/_vendor/pep517/in_process/_in_process.py get_requires_for_build_wheel /tmp/tmpqeoy3kge 2021-12-23T02:55:29,604 running egg_info 2021-12-23T02:55:29,666 writing manifest file 'evatool.egg-info/SOURCES.txt' 2021-12-23T02:55:29,770 Getting requirements to build wheel: finished with status 'done' 2021-12-23T02:55:29,787 Created temporary directory: /tmp/pip-modern-metadata-b8ute_1l 2021-12-23T02:55:29,792 Preparing metadata (pyproject.toml): started 2021-12-23T02:55:29,793 Running command /usr/bin/python3 /usr/local/lib/python3.7/dist-packages/pip/_vendor/pep517/in_process/_in_process.py prepare_metadata_for_build_wheel /tmp/tmpu_jlkdjm 2021-12-23T02:55:31,452 running dist_info 2021-12-23T02:55:31,480 creating /tmp/pip-modern-metadata-b8ute_1l/evatool.egg-info 2021-12-23T02:55:31,496 writing manifest file '/tmp/pip-modern-metadata-b8ute_1l/evatool.egg-info/SOURCES.txt' 2021-12-23T02:55:31,536 writing manifest file '/tmp/pip-modern-metadata-b8ute_1l/evatool.egg-info/SOURCES.txt' 2021-12-23T02:55:31,793 Preparing metadata (pyproject.toml): finished with status 'done' 2021-12-23T02:55:31,806 Source in /tmp/pip-wheel-_zix_e5o/evatool_6872d9d583124801a07b8a96818fd047 has version 0.1.14, which satisfies requirement evatool==0.1.14 from https://files.pythonhosted.org/packages/79/2e/41a1c9da683aa9089734777485801a0fadc741deb0e23b24c4b61381a1c6/evatool-0.1.14.tar.gz#sha256=33369c22d3ed30bae5fb41eca7efd201a184b2f9f7a92f5baaefea42f23ab834 2021-12-23T02:55:31,808 Removed evatool==0.1.14 from https://files.pythonhosted.org/packages/79/2e/41a1c9da683aa9089734777485801a0fadc741deb0e23b24c4b61381a1c6/evatool-0.1.14.tar.gz#sha256=33369c22d3ed30bae5fb41eca7efd201a184b2f9f7a92f5baaefea42f23ab834 from build tracker '/tmp/pip-req-tracker-8c7ipfea' 2021-12-23T02:55:31,823 Created temporary directory: /tmp/pip-unpack-sb_882ee 2021-12-23T02:55:31,824 Building wheels for collected packages: evatool 2021-12-23T02:55:31,832 Created temporary directory: /tmp/pip-wheel-78f0fee6 2021-12-23T02:55:31,832 Destination directory: /tmp/pip-wheel-78f0fee6 2021-12-23T02:55:31,837 Building wheel for evatool (pyproject.toml): started 2021-12-23T02:55:31,838 Running command /usr/bin/python3 /usr/local/lib/python3.7/dist-packages/pip/_vendor/pep517/in_process/_in_process.py build_wheel /tmp/tmp7ce3g0gt 2021-12-23T02:55:33,609 running bdist_wheel 2021-12-23T02:55:34,021 running build 2021-12-23T02:55:34,021 running build_py 2021-12-23T02:55:34,030 creating build 2021-12-23T02:55:34,030 creating build/lib 2021-12-23T02:55:34,032 creating build/lib/tests 2021-12-23T02:55:34,034 copying tests/__init__.py -> build/lib/tests 2021-12-23T02:55:34,037 copying tests/test_stat.py -> build/lib/tests 2021-12-23T02:55:34,040 copying tests/test_fastq.py -> build/lib/tests 2021-12-23T02:55:34,044 copying tests/test_config.py -> build/lib/tests 2021-12-23T02:55:34,047 copying tests/test_sam.py -> build/lib/tests 2021-12-23T02:55:34,050 copying tests/test_bam.py -> build/lib/tests 2021-12-23T02:55:34,053 copying tests/test_tag.py -> build/lib/tests 2021-12-23T02:55:34,057 copying tests/test_report.py -> build/lib/tests 2021-12-23T02:55:34,060 copying tests/test_plot.py -> build/lib/tests 2021-12-23T02:55:34,064 creating build/lib/evatool 2021-12-23T02:55:34,066 copying evatool/__init__.py -> build/lib/evatool 2021-12-23T02:55:34,070 copying evatool/main.py -> build/lib/evatool 2021-12-23T02:55:34,074 creating build/lib/evatool/bin 2021-12-23T02:55:34,076 copying evatool/bin/__init__.py -> build/lib/evatool/bin 2021-12-23T02:55:34,081 creating build/lib/evatool/utils 2021-12-23T02:55:34,082 copying evatool/utils/__init__.py -> build/lib/evatool/utils 2021-12-23T02:55:34,086 copying evatool/utils/config.py -> build/lib/evatool/utils 2021-12-23T02:55:34,089 copying evatool/utils/bam.py -> build/lib/evatool/utils 2021-12-23T02:55:34,092 copying evatool/utils/plot.py -> build/lib/evatool/utils 2021-12-23T02:55:34,096 copying evatool/utils/fastq.py -> build/lib/evatool/utils 2021-12-23T02:55:34,099 copying evatool/utils/stat.py -> build/lib/evatool/utils 2021-12-23T02:55:34,103 copying evatool/utils/sam.py -> build/lib/evatool/utils 2021-12-23T02:55:34,106 copying evatool/utils/logger.py -> build/lib/evatool/utils 2021-12-23T02:55:34,109 copying evatool/utils/tag.py -> build/lib/evatool/utils 2021-12-23T02:55:34,113 copying evatool/utils/report.py -> build/lib/evatool/utils 2021-12-23T02:55:34,118 creating build/lib/evatool/resource 2021-12-23T02:55:34,119 copying evatool/resource/__init__.py -> build/lib/evatool/resource 2021-12-23T02:55:34,121 running egg_info 2021-12-23T02:55:34,190 writing manifest file 'evatool.egg-info/SOURCES.txt' 2021-12-23T02:55:34,200 copying evatool/bin/bedtools -> build/lib/evatool/bin 2021-12-23T02:55:36,357 copying evatool/bin/bowtie2 -> build/lib/evatool/bin 2021-12-23T02:55:36,363 copying evatool/bin/bowtie2-align-l -> build/lib/evatool/bin 2021-12-23T02:55:37,278 copying evatool/bin/bowtie2-align-l-debug -> build/lib/evatool/bin 2021-12-23T02:55:38,524 copying evatool/bin/bowtie2-align-s -> build/lib/evatool/bin 2021-12-23T02:55:39,699 copying evatool/bin/bowtie2-align-s-debug -> build/lib/evatool/bin 2021-12-23T02:55:41,312 copying evatool/bin/fastq-dump -> build/lib/evatool/bin 2021-12-23T02:55:41,450 copying evatool/bin/samtools -> build/lib/evatool/bin 2021-12-23T02:55:41,822 copying evatool/bin/trimmomatic-0.39.jar -> build/lib/evatool/bin 2021-12-23T02:55:41,835 copying evatool/resource/logging.conf -> build/lib/evatool/resource 2021-12-23T02:55:41,840 copying evatool/resource/reference_config.json -> build/lib/evatool/resource 2021-12-23T02:55:41,843 copying evatool/resource/template_report.html -> build/lib/evatool/resource 2021-12-23T02:55:41,848 copying evatool/resource/tool_config.json -> build/lib/evatool/resource 2021-12-23T02:55:41,870 running install 2021-12-23T02:55:41,877 running install_lib 2021-12-23T02:55:41,884 creating build/bdist.linux-armv7l 2021-12-23T02:55:41,884 creating build/bdist.linux-armv7l/wheel 2021-12-23T02:55:41,887 creating build/bdist.linux-armv7l/wheel/tests 2021-12-23T02:55:41,916 creating build/bdist.linux-armv7l/wheel/evatool 2021-12-23T02:55:41,919 creating build/bdist.linux-armv7l/wheel/evatool/bin 2021-12-23T02:55:50,713 creating build/bdist.linux-armv7l/wheel/evatool/utils 2021-12-23T02:55:50,753 creating build/bdist.linux-armv7l/wheel/evatool/resource 2021-12-23T02:55:50,774 running install_egg_info 2021-12-23T02:55:50,790 Copying evatool.egg-info to build/bdist.linux-armv7l/wheel/evatool-0.1.14-py3.7.egg-info 2021-12-23T02:55:50,816 running install_scripts 2021-12-23T02:56:55,265 Building wheel for evatool (pyproject.toml): finished with status 'done' 2021-12-23T02:56:58,190 Created wheel for evatool: filename=evatool-0.1.14-py3-none-any.whl size=55173285 sha256=5107adffb3da859bb42bedb9afb7e05cdad26e30b6a07bbf4ad1be202ce41619 2021-12-23T02:56:58,191 Stored in directory: /tmp/pip-ephem-wheel-cache-tn3zmy2p/wheels/8f/38/05/79a69cd5c4603ca585e46dfbd77b953a0c311c1cd332457d34 2021-12-23T02:56:58,284 Successfully built evatool 2021-12-23T02:57:02,454 Removed build tracker: '/tmp/pip-req-tracker-8c7ipfea'