2021-12-24T12:58:07,257 Created temporary directory: /tmp/pip-ephem-wheel-cache-s66c9xfh 2021-12-24T12:58:07,263 Created temporary directory: /tmp/pip-req-tracker-1q7ir20b 2021-12-24T12:58:07,264 Initialized build tracking at /tmp/pip-req-tracker-1q7ir20b 2021-12-24T12:58:07,264 Created build tracker: /tmp/pip-req-tracker-1q7ir20b 2021-12-24T12:58:07,264 Entered build tracker: /tmp/pip-req-tracker-1q7ir20b 2021-12-24T12:58:07,265 Created temporary directory: /tmp/pip-wheel-snhqcwbz 2021-12-24T12:58:07,337 Looking in indexes: https://pypi.org/simple, https://www.piwheels.org/simple 2021-12-24T12:58:07,342 2 location(s) to search for versions of evatool: 2021-12-24T12:58:07,342 * https://pypi.org/simple/evatool/ 2021-12-24T12:58:07,342 * https://www.piwheels.org/simple/evatool/ 2021-12-24T12:58:07,343 Fetching project page and analyzing links: https://pypi.org/simple/evatool/ 2021-12-24T12:58:07,345 Getting page https://pypi.org/simple/evatool/ 2021-12-24T12:58:07,348 Found index url https://pypi.org/simple 2021-12-24T12:58:07,579 Skipping link: No binaries permitted for evatool: https://files.pythonhosted.org/packages/60/e2/17eae3995582dfe47a1d5b0ae17239819b824a4e0b9bf14ca4bda76663a4/evatool-0.1.7-py3-none-any.whl#sha256=6ed4441373f572fa0a32a1ae983dcbeef16b9df026c54ac5820d09a9ec926248 (from https://pypi.org/simple/evatool/) (requires-python:>=3.5) 2021-12-24T12:58:07,581 Found link https://files.pythonhosted.org/packages/85/e8/51de381593fa22616e386469ace06f30555e579c2699241daa99f2c529fe/evatool-0.1.7.tar.gz#sha256=2aab11bc60fa77dc4f6f77208ee779658d5637d764bb8a757695cb21de33be65 (from https://pypi.org/simple/evatool/) (requires-python:>=3.5), version: 0.1.7 2021-12-24T12:58:07,582 Skipping link: No binaries permitted for evatool: https://files.pythonhosted.org/packages/60/08/4c0a8e530279728ce81dba5abdd902ef20b15d4ededf1e99542d99992244/evatool-0.1.8-py3-none-any.whl#sha256=6e72b78952a543fdb36af73dbd9f993d5d5a351a3988de1e807e14b1edb96839 (from https://pypi.org/simple/evatool/) (requires-python:>=3.5) 2021-12-24T12:58:07,583 Found link https://files.pythonhosted.org/packages/3e/ab/d596be144189a73e2db2e5898a15d2872dd452a4bc4646e7216a246a2c12/evatool-0.1.8.tar.gz#sha256=c2e01d036086aadbe8184ded37118738a5af0e81139886b0a88f2d41da8016c3 (from https://pypi.org/simple/evatool/) (requires-python:>=3.5), version: 0.1.8 2021-12-24T12:58:07,584 Skipping link: No binaries permitted for evatool: https://files.pythonhosted.org/packages/5e/05/b23629e11097e1290fe23de283850208d9273da7d0c67831cb56a854343a/evatool-0.1.9-py3-none-any.whl#sha256=559aab9984e62764599cd0fe16c6e36b40c6e8fc1538ddd8edec9e8cf8d67f9f (from https://pypi.org/simple/evatool/) (requires-python:>=3.5) 2021-12-24T12:58:07,585 Found link https://files.pythonhosted.org/packages/a4/ec/37afbe66d5c524a5c7e241d40b3782dd54899ce6de810cb85381e56c1a64/evatool-0.1.9.tar.gz#sha256=be3e065acbfbc65da19609b5130859c4bcc141721abe3ce2fde50f44845f3305 (from https://pypi.org/simple/evatool/) (requires-python:>=3.5), version: 0.1.9 2021-12-24T12:58:07,586 Skipping link: No binaries permitted for evatool: https://files.pythonhosted.org/packages/a2/fc/25f893564910fc68ca570bdfd85c5390cc0efea24e0ed04d5bc3d62b80da/evatool-0.1.10-py3-none-any.whl#sha256=c992ca873a96a2c37d920fb8fba597e420c182a3983504271597b252c3e68850 (from https://pypi.org/simple/evatool/) (requires-python:>=3.5) 2021-12-24T12:58:07,587 Found link https://files.pythonhosted.org/packages/15/13/8697203b01608be387a4ba23504896273dcc8a096b050a1d2b2aac73c796/evatool-0.1.10.tar.gz#sha256=8466a6e1a267fc008e3a3b1601a92d3c78f1ef888a45d006952b514310588bea (from https://pypi.org/simple/evatool/) (requires-python:>=3.5), version: 0.1.10 2021-12-24T12:58:07,588 Skipping link: No binaries permitted for evatool: https://files.pythonhosted.org/packages/52/98/025f1fa3c8e989505e915ac6cfed2baae36aaba8e0ee7289fd30dfe9e936/evatool-0.1.11-py3-none-any.whl#sha256=8c07cdd19af3cbc903b450854c9d9efa19f5ab2416b99a6e0db9f6318dd18637 (from https://pypi.org/simple/evatool/) (requires-python:>=3.5) 2021-12-24T12:58:07,589 Found link https://files.pythonhosted.org/packages/3e/08/be3ecfd98a752bbde6153b332cdca4ca18f27ca196421ae054562657673c/evatool-0.1.11.tar.gz#sha256=f70758567a1a70889cb25d8a9b99e96483402a168ae2d5a3ef5ed84de9c5b0e2 (from https://pypi.org/simple/evatool/) (requires-python:>=3.5), version: 0.1.11 2021-12-24T12:58:07,589 Skipping link: No binaries permitted for evatool: https://files.pythonhosted.org/packages/de/e3/567fcddeddf1baaa449ebb446af3ff5b865900bfbe6292037f7a6de7818d/evatool-0.1.12-py3-none-any.whl#sha256=719f3516c8a57dbe7ab819f73f356d32338143cac2f1576d858f6d1e09094cd1 (from https://pypi.org/simple/evatool/) (requires-python:>=3.5) 2021-12-24T12:58:07,591 Found link https://files.pythonhosted.org/packages/8f/16/c8c2ddc58c1836e041d76a8e82b7cfe24f24d5d3218ed121d1749099f703/evatool-0.1.12.tar.gz#sha256=c4df8b8726cba529d6adf1553ff0eb9025cb7364f5cfff4b4ec7f30a235fdb3a (from https://pypi.org/simple/evatool/) (requires-python:>=3.5), version: 0.1.12 2021-12-24T12:58:07,591 Skipping link: No binaries permitted for evatool: https://files.pythonhosted.org/packages/96/b2/ec17a12dde5d12736ef83a0ca1ccde363bb228bb2c7f0abd9c196da9b42c/evatool-0.1.13-py3-none-any.whl#sha256=c0f174225617096059a29a131722e812e09c21456e4c2e7bca201b27f1853ecb (from https://pypi.org/simple/evatool/) (requires-python:>=3.5) 2021-12-24T12:58:07,593 Found link https://files.pythonhosted.org/packages/a5/4b/bcd8ad863a67a06fa6eaa6e9d65f13c08210ebb94fcc52d508acdab69c59/evatool-0.1.13.tar.gz#sha256=4945d2d596edd631c56aa280696ccdf91cd7a23eeda44d801cab38f053805e20 (from https://pypi.org/simple/evatool/) (requires-python:>=3.5), version: 0.1.13 2021-12-24T12:58:07,593 Skipping link: No binaries permitted for evatool: https://files.pythonhosted.org/packages/8f/e5/e5a9b899761a6d2fbc803ccc5eef0ee04baedaf67090a8ac20760aeeee2e/evatool-0.1.14-py3-none-any.whl#sha256=5b1c1f70e9769ca875454ae4c1e08473879dbc8400562f0555b40f90a6d5388f (from https://pypi.org/simple/evatool/) (requires-python:>=3.5) 2021-12-24T12:58:07,594 Found link https://files.pythonhosted.org/packages/79/2e/41a1c9da683aa9089734777485801a0fadc741deb0e23b24c4b61381a1c6/evatool-0.1.14.tar.gz#sha256=33369c22d3ed30bae5fb41eca7efd201a184b2f9f7a92f5baaefea42f23ab834 (from https://pypi.org/simple/evatool/) (requires-python:>=3.5), version: 0.1.14 2021-12-24T12:58:07,595 Skipping link: No binaries permitted for evatool: https://files.pythonhosted.org/packages/d8/1c/e32900af2a5ebbb0a50d06ff77b07bc74a7ef5ea69d4f347d2815730fdc4/evatool-0.1.15-py3-none-any.whl#sha256=c826573b19d42323c9a78aa30754ec23e71e180a7b5a61932e31bb6ceb9a2b9f (from https://pypi.org/simple/evatool/) (requires-python:>=3.5) 2021-12-24T12:58:07,596 Found link https://files.pythonhosted.org/packages/70/b1/36ad5923c2aa987aba88a2dc5189d7e276d2e05e2c676994629c4abe8014/evatool-0.1.15.tar.gz#sha256=c1af75cf9e872c0e2f71134e314a816afac0356c4d9d72b306969054c8017d00 (from https://pypi.org/simple/evatool/) (requires-python:>=3.5), version: 0.1.15 2021-12-24T12:58:07,597 Skipping link: No binaries permitted for evatool: https://files.pythonhosted.org/packages/03/56/fb811ed4ccd2caebb31b2b78187e3fa13037edddcbd1aa2d5cc2e3954d91/evatool-0.1.16-py3-none-any.whl#sha256=996387b30ecf17382710d517b672b7b810765f89bb230cded12b899e69277a2b (from https://pypi.org/simple/evatool/) (requires-python:>=3.5) 2021-12-24T12:58:07,598 Found link https://files.pythonhosted.org/packages/48/ef/36db864ac0c098cfe39a3df16afcfeb6c9aa5ba717065993143ed9c7b359/evatool-0.1.16.tar.gz#sha256=9b80c2fec57acaa15c776f52d43353f2284b618b6c1ca4544e8fe1c6791dbc86 (from https://pypi.org/simple/evatool/) (requires-python:>=3.5), version: 0.1.16 2021-12-24T12:58:07,599 Fetching project page and analyzing links: https://www.piwheels.org/simple/evatool/ 2021-12-24T12:58:07,600 Getting page https://www.piwheels.org/simple/evatool/ 2021-12-24T12:58:07,602 Found index url https://www.piwheels.org/simple 2021-12-24T12:58:07,828 Skipping link: No binaries permitted for evatool: https://www.piwheels.org/simple/evatool/evatool-0.1.10-py3-none-any.whl#sha256=d9a36d451de5384ab39339fed153fc79807f013be338c70bc7290ba820649833 (from https://www.piwheels.org/simple/evatool/) (requires-python:>=3.5) 2021-12-24T12:58:07,829 Skipping link: No binaries permitted for evatool: https://www.piwheels.org/simple/evatool/evatool-0.1.11-py3-none-any.whl#sha256=be98ee0ee7dc4cf76948090ab3c82c5bf4fcc1a5e1435a8c1fe17ff44845d47f (from https://www.piwheels.org/simple/evatool/) (requires-python:>=3.5) 2021-12-24T12:58:07,829 Skipping link: No binaries permitted for evatool: https://www.piwheels.org/simple/evatool/evatool-0.1.12-py3-none-any.whl#sha256=121a895115279d52d137fc16d5113206276964ed72f185efe0022c3f170f47ea (from https://www.piwheels.org/simple/evatool/) (requires-python:>=3.5) 2021-12-24T12:58:07,830 Skipping link: No binaries permitted for evatool: https://www.piwheels.org/simple/evatool/evatool-0.1.13-py3-none-any.whl#sha256=59e7774f7caae3dbbf7690468362d6b1fa4c3804fb8468f799ee7ef4c1ef0367 (from https://www.piwheels.org/simple/evatool/) (requires-python:>=3.5) 2021-12-24T12:58:07,830 Skipping link: No binaries permitted for evatool: https://www.piwheels.org/simple/evatool/evatool-0.1.14-py3-none-any.whl#sha256=5107adffb3da859bb42bedb9afb7e05cdad26e30b6a07bbf4ad1be202ce41619 (from https://www.piwheels.org/simple/evatool/) (requires-python:>=3.5) 2021-12-24T12:58:07,831 Skipping link: No binaries permitted for evatool: https://www.piwheels.org/simple/evatool/evatool-0.1.15-py3-none-any.whl#sha256=43140e3e9dce7abf69e449cad3c9d9be0fb91faededc5301fe66cba21515f1c1 (from https://www.piwheels.org/simple/evatool/) (requires-python:>=3.5) 2021-12-24T12:58:07,831 Skipping link: No binaries permitted for evatool: https://www.piwheels.org/simple/evatool/evatool-0.1.7-py3-none-any.whl#sha256=643671af2c103865f1e03289c73a9a8e9181191d1e40886e393f3f7af204d252 (from https://www.piwheels.org/simple/evatool/) (requires-python:>=3.5) 2021-12-24T12:58:07,831 Skipping link: No binaries permitted for evatool: https://www.piwheels.org/simple/evatool/evatool-0.1.8-py3-none-any.whl#sha256=d8420f8a6bd687137d27febd5bd5961b66ed306290f411228203ebdd612185f5 (from https://www.piwheels.org/simple/evatool/) (requires-python:>=3.5) 2021-12-24T12:58:07,832 Skipping link: No binaries permitted for evatool: https://www.piwheels.org/simple/evatool/evatool-0.1.9-py3-none-any.whl#sha256=16a78c2aaed7c17d48690a5c6dda3f85823db9897320e9a9db159b6a0a8b02ea (from https://www.piwheels.org/simple/evatool/) (requires-python:>=3.5) 2021-12-24T12:58:07,832 Skipping link: not a file: https://www.piwheels.org/simple/evatool/ 2021-12-24T12:58:07,833 Skipping link: not a file: https://pypi.org/simple/evatool/ 2021-12-24T12:58:07,868 Given no hashes to check 1 links for project 'evatool': discarding no candidates 2021-12-24T12:58:07,897 Collecting evatool==0.1.16 2021-12-24T12:58:07,900 Created temporary directory: /tmp/pip-unpack-j0ojv1i3 2021-12-24T12:58:07,993 Downloading evatool-0.1.16.tar.gz (54.8 MB) 2021-12-24T12:58:36,360 Added evatool==0.1.16 from https://files.pythonhosted.org/packages/48/ef/36db864ac0c098cfe39a3df16afcfeb6c9aa5ba717065993143ed9c7b359/evatool-0.1.16.tar.gz#sha256=9b80c2fec57acaa15c776f52d43353f2284b618b6c1ca4544e8fe1c6791dbc86 to build tracker '/tmp/pip-req-tracker-1q7ir20b' 2021-12-24T12:58:36,368 Created temporary directory: /tmp/pip-build-env-l4h3gvm5 2021-12-24T12:58:36,382 Created temporary directory: /tmp/pip-standalone-pip-dk5pvfnt 2021-12-24T12:58:38,117 Installing build dependencies: started 2021-12-24T12:58:38,118 Running command /usr/bin/python3 /tmp/pip-standalone-pip-dk5pvfnt/__env_pip__.zip/pip install --ignore-installed --no-user --prefix /tmp/pip-build-env-l4h3gvm5/overlay --no-warn-script-location -v --no-binary evatool --only-binary :none: -i https://pypi.org/simple --extra-index-url https://www.piwheels.org/simple --prefer-binary -- setuptools wheel 2021-12-24T12:58:45,920 Using pip 21.3.1 from /tmp/pip-standalone-pip-dk5pvfnt/__env_pip__.zip/pip (python 3.7) 2021-12-24T12:58:46,697 Looking in indexes: https://pypi.org/simple, https://www.piwheels.org/simple 2021-12-24T12:58:51,696 Collecting setuptools 2021-12-24T12:58:51,910 Using cached https://www.piwheels.org/simple/setuptools/setuptools-60.1.0-py3-none-any.whl (952 kB) 2021-12-24T12:58:52,642 Collecting wheel 2021-12-24T12:58:52,676 Using cached https://www.piwheels.org/simple/wheel/wheel-0.37.1-py2.py3-none-any.whl (35 kB) 2021-12-24T12:58:56,189 Installing collected packages: wheel, setuptools 2021-12-24T12:58:56,448 Creating /tmp/pip-build-env-l4h3gvm5/overlay/bin 2021-12-24T12:58:56,451 changing mode of /tmp/pip-build-env-l4h3gvm5/overlay/bin/wheel to 755 2021-12-24T12:58:59,522 Successfully installed setuptools-60.1.0 wheel-0.37.1 2021-12-24T12:59:00,066 Installing build dependencies: finished with status 'done' 2021-12-24T12:59:00,087 Getting requirements to build wheel: started 2021-12-24T12:59:00,088 Running command /usr/bin/python3 /usr/local/lib/python3.7/dist-packages/pip/_vendor/pep517/in_process/_in_process.py get_requires_for_build_wheel /tmp/tmpz91iqizb 2021-12-24T12:59:01,809 running egg_info 2021-12-24T12:59:01,814 writing evatool.egg-info/PKG-INFO 2021-12-24T12:59:01,818 writing dependency_links to evatool.egg-info/dependency_links.txt 2021-12-24T12:59:01,821 writing entry points to evatool.egg-info/entry_points.txt 2021-12-24T12:59:01,823 writing requirements to evatool.egg-info/requires.txt 2021-12-24T12:59:01,825 writing top-level names to evatool.egg-info/top_level.txt 2021-12-24T12:59:01,858 reading manifest file 'evatool.egg-info/SOURCES.txt' 2021-12-24T12:59:01,863 adding license file 'LICENSE' 2021-12-24T12:59:01,872 writing manifest file 'evatool.egg-info/SOURCES.txt' 2021-12-24T12:59:01,875 Error processing line 1 of /tmp/pip-build-env-l4h3gvm5/overlay/lib/python3.7/site-packages/distutils-precedence.pth: 2021-12-24T12:59:01,876 Traceback (most recent call last): 2021-12-24T12:59:01,876 File "/usr/lib/python3.7/site.py", line 174, in addpackage 2021-12-24T12:59:01,877 exec(line) 2021-12-24T12:59:01,877 File "", line 1, in 2021-12-24T12:59:01,877 AttributeError: module '_distutils_hack' has no attribute 'ensure_shim' 2021-12-24T12:59:01,878 Remainder of file ignored 2021-12-24T12:59:01,976 Getting requirements to build wheel: finished with status 'done' 2021-12-24T12:59:01,993 Created temporary directory: /tmp/pip-modern-metadata-a51bfhmi 2021-12-24T12:59:01,999 Preparing metadata (pyproject.toml): started 2021-12-24T12:59:02,000 Running command /usr/bin/python3 /usr/local/lib/python3.7/dist-packages/pip/_vendor/pep517/in_process/_in_process.py prepare_metadata_for_build_wheel /tmp/tmpkbthbjdq 2021-12-24T12:59:03,615 running dist_info 2021-12-24T12:59:03,642 creating /tmp/pip-modern-metadata-a51bfhmi/evatool.egg-info 2021-12-24T12:59:03,643 writing /tmp/pip-modern-metadata-a51bfhmi/evatool.egg-info/PKG-INFO 2021-12-24T12:59:03,648 writing dependency_links to /tmp/pip-modern-metadata-a51bfhmi/evatool.egg-info/dependency_links.txt 2021-12-24T12:59:03,651 writing entry points to /tmp/pip-modern-metadata-a51bfhmi/evatool.egg-info/entry_points.txt 2021-12-24T12:59:03,653 writing requirements to /tmp/pip-modern-metadata-a51bfhmi/evatool.egg-info/requires.txt 2021-12-24T12:59:03,655 writing top-level names to /tmp/pip-modern-metadata-a51bfhmi/evatool.egg-info/top_level.txt 2021-12-24T12:59:03,658 writing manifest file '/tmp/pip-modern-metadata-a51bfhmi/evatool.egg-info/SOURCES.txt' 2021-12-24T12:59:03,688 reading manifest file '/tmp/pip-modern-metadata-a51bfhmi/evatool.egg-info/SOURCES.txt' 2021-12-24T12:59:03,691 adding license file 'LICENSE' 2021-12-24T12:59:03,697 writing manifest file '/tmp/pip-modern-metadata-a51bfhmi/evatool.egg-info/SOURCES.txt' 2021-12-24T12:59:03,699 creating '/tmp/pip-modern-metadata-a51bfhmi/evatool.dist-info' 2021-12-24T12:59:03,831 adding license file "LICENSE" (matched pattern "LICEN[CS]E*") 2021-12-24T12:59:03,844 Error processing line 1 of /tmp/pip-build-env-l4h3gvm5/overlay/lib/python3.7/site-packages/distutils-precedence.pth: 2021-12-24T12:59:03,845 Traceback (most recent call last): 2021-12-24T12:59:03,845 File "/usr/lib/python3.7/site.py", line 174, in addpackage 2021-12-24T12:59:03,846 exec(line) 2021-12-24T12:59:03,846 File "", line 1, in 2021-12-24T12:59:03,846 AttributeError: module '_distutils_hack' has no attribute 'ensure_shim' 2021-12-24T12:59:03,847 Remainder of file ignored 2021-12-24T12:59:03,949 Preparing metadata (pyproject.toml): finished with status 'done' 2021-12-24T12:59:03,963 Source in /tmp/pip-wheel-snhqcwbz/evatool_edf73e2832ca4deea55acd980a2e8aa6 has version 0.1.16, which satisfies requirement evatool==0.1.16 from https://files.pythonhosted.org/packages/48/ef/36db864ac0c098cfe39a3df16afcfeb6c9aa5ba717065993143ed9c7b359/evatool-0.1.16.tar.gz#sha256=9b80c2fec57acaa15c776f52d43353f2284b618b6c1ca4544e8fe1c6791dbc86 2021-12-24T12:59:03,965 Removed evatool==0.1.16 from https://files.pythonhosted.org/packages/48/ef/36db864ac0c098cfe39a3df16afcfeb6c9aa5ba717065993143ed9c7b359/evatool-0.1.16.tar.gz#sha256=9b80c2fec57acaa15c776f52d43353f2284b618b6c1ca4544e8fe1c6791dbc86 from build tracker '/tmp/pip-req-tracker-1q7ir20b' 2021-12-24T12:59:03,979 Created temporary directory: /tmp/pip-unpack-m5u00cw2 2021-12-24T12:59:03,980 Building wheels for collected packages: evatool 2021-12-24T12:59:03,988 Created temporary directory: /tmp/pip-wheel-4w9cbexc 2021-12-24T12:59:03,988 Destination directory: /tmp/pip-wheel-4w9cbexc 2021-12-24T12:59:03,993 Building wheel for evatool (pyproject.toml): started 2021-12-24T12:59:03,994 Running command /usr/bin/python3 /usr/local/lib/python3.7/dist-packages/pip/_vendor/pep517/in_process/_in_process.py build_wheel /tmp/tmpn0cx9pgj 2021-12-24T12:59:05,697 running bdist_wheel 2021-12-24T12:59:06,117 running build 2021-12-24T12:59:06,118 running build_py 2021-12-24T12:59:06,126 creating build 2021-12-24T12:59:06,126 creating build/lib 2021-12-24T12:59:06,128 creating build/lib/tests 2021-12-24T12:59:06,130 copying tests/test_plot.py -> build/lib/tests 2021-12-24T12:59:06,133 copying tests/test_bam.py -> build/lib/tests 2021-12-24T12:59:06,137 copying tests/test_sam.py -> build/lib/tests 2021-12-24T12:59:06,140 copying tests/test_config.py -> build/lib/tests 2021-12-24T12:59:06,143 copying tests/test_fastq.py -> build/lib/tests 2021-12-24T12:59:06,146 copying tests/test_stat.py -> build/lib/tests 2021-12-24T12:59:06,149 copying tests/test_tag.py -> build/lib/tests 2021-12-24T12:59:06,152 copying tests/test_report.py -> build/lib/tests 2021-12-24T12:59:06,155 copying tests/__init__.py -> build/lib/tests 2021-12-24T12:59:06,159 creating build/lib/evatool 2021-12-24T12:59:06,160 copying evatool/main.py -> build/lib/evatool 2021-12-24T12:59:06,164 copying evatool/__init__.py -> build/lib/evatool 2021-12-24T12:59:06,168 creating build/lib/evatool/bin 2021-12-24T12:59:06,169 copying evatool/bin/__init__.py -> build/lib/evatool/bin 2021-12-24T12:59:06,174 creating build/lib/evatool/utils 2021-12-24T12:59:06,176 copying evatool/utils/report.py -> build/lib/evatool/utils 2021-12-24T12:59:06,180 copying evatool/utils/stat.py -> build/lib/evatool/utils 2021-12-24T12:59:06,184 copying evatool/utils/fastq.py -> build/lib/evatool/utils 2021-12-24T12:59:06,187 copying evatool/utils/bam.py -> build/lib/evatool/utils 2021-12-24T12:59:06,190 copying evatool/utils/logger.py -> build/lib/evatool/utils 2021-12-24T12:59:06,193 copying evatool/utils/plot.py -> build/lib/evatool/utils 2021-12-24T12:59:06,197 copying evatool/utils/sam.py -> build/lib/evatool/utils 2021-12-24T12:59:06,200 copying evatool/utils/__init__.py -> build/lib/evatool/utils 2021-12-24T12:59:06,204 copying evatool/utils/config.py -> build/lib/evatool/utils 2021-12-24T12:59:06,207 copying evatool/utils/tag.py -> build/lib/evatool/utils 2021-12-24T12:59:06,211 creating build/lib/evatool/resource 2021-12-24T12:59:06,213 copying evatool/resource/__init__.py -> build/lib/evatool/resource 2021-12-24T12:59:06,215 running egg_info 2021-12-24T12:59:06,240 writing evatool.egg-info/PKG-INFO 2021-12-24T12:59:06,243 writing dependency_links to evatool.egg-info/dependency_links.txt 2021-12-24T12:59:06,245 writing entry points to evatool.egg-info/entry_points.txt 2021-12-24T12:59:06,247 writing requirements to evatool.egg-info/requires.txt 2021-12-24T12:59:06,249 writing top-level names to evatool.egg-info/top_level.txt 2021-12-24T12:59:06,272 reading manifest file 'evatool.egg-info/SOURCES.txt' 2021-12-24T12:59:06,277 adding license file 'LICENSE' 2021-12-24T12:59:06,285 writing manifest file 'evatool.egg-info/SOURCES.txt' 2021-12-24T12:59:06,295 copying evatool/bin/bedtools -> build/lib/evatool/bin 2021-12-24T12:59:09,199 copying evatool/bin/bowtie2 -> build/lib/evatool/bin 2021-12-24T12:59:09,207 copying evatool/bin/bowtie2-align-l -> build/lib/evatool/bin 2021-12-24T12:59:10,430 copying evatool/bin/bowtie2-align-l-debug -> build/lib/evatool/bin 2021-12-24T12:59:12,965 copying evatool/bin/bowtie2-align-s -> build/lib/evatool/bin 2021-12-24T12:59:13,899 copying evatool/bin/bowtie2-align-s-debug -> build/lib/evatool/bin 2021-12-24T12:59:15,097 copying evatool/bin/fastq-dump -> build/lib/evatool/bin 2021-12-24T12:59:15,291 copying evatool/bin/samtools -> build/lib/evatool/bin 2021-12-24T12:59:15,731 copying evatool/bin/trimmomatic-0.39.jar -> build/lib/evatool/bin 2021-12-24T12:59:15,744 copying evatool/resource/logging.conf -> build/lib/evatool/resource 2021-12-24T12:59:15,749 copying evatool/resource/reference_config.json -> build/lib/evatool/resource 2021-12-24T12:59:15,754 copying evatool/resource/template_report.html -> build/lib/evatool/resource 2021-12-24T12:59:15,760 copying evatool/resource/tool_config.json -> build/lib/evatool/resource 2021-12-24T12:59:15,780 installing to build/bdist.linux-armv7l/wheel 2021-12-24T12:59:15,781 running install 2021-12-24T12:59:15,783 running install_lib 2021-12-24T12:59:15,793 creating build/bdist.linux-armv7l 2021-12-24T12:59:15,794 creating build/bdist.linux-armv7l/wheel 2021-12-24T12:59:15,798 creating build/bdist.linux-armv7l/wheel/tests 2021-12-24T12:59:15,800 copying build/lib/tests/test_plot.py -> build/bdist.linux-armv7l/wheel/tests 2021-12-24T12:59:15,805 copying build/lib/tests/test_bam.py -> build/bdist.linux-armv7l/wheel/tests 2021-12-24T12:59:15,809 copying build/lib/tests/test_sam.py -> build/bdist.linux-armv7l/wheel/tests 2021-12-24T12:59:15,813 copying build/lib/tests/test_config.py -> build/bdist.linux-armv7l/wheel/tests 2021-12-24T12:59:15,817 copying build/lib/tests/test_fastq.py -> build/bdist.linux-armv7l/wheel/tests 2021-12-24T12:59:15,821 copying build/lib/tests/test_stat.py -> build/bdist.linux-armv7l/wheel/tests 2021-12-24T12:59:15,825 copying build/lib/tests/test_tag.py -> build/bdist.linux-armv7l/wheel/tests 2021-12-24T12:59:15,828 copying build/lib/tests/test_report.py -> build/bdist.linux-armv7l/wheel/tests 2021-12-24T12:59:15,832 copying build/lib/tests/__init__.py -> build/bdist.linux-armv7l/wheel/tests 2021-12-24T12:59:15,836 creating build/bdist.linux-armv7l/wheel/evatool 2021-12-24T12:59:15,839 creating build/bdist.linux-armv7l/wheel/evatool/bin 2021-12-24T12:59:15,841 copying build/lib/evatool/bin/trimmomatic-0.39.jar -> build/bdist.linux-armv7l/wheel/evatool/bin 2021-12-24T12:59:15,852 copying build/lib/evatool/bin/bowtie2-align-s-debug -> build/bdist.linux-armv7l/wheel/evatool/bin 2021-12-24T12:59:17,068 copying build/lib/evatool/bin/fastq-dump -> build/bdist.linux-armv7l/wheel/evatool/bin 2021-12-24T12:59:17,213 copying build/lib/evatool/bin/bowtie2 -> build/bdist.linux-armv7l/wheel/evatool/bin 2021-12-24T12:59:17,217 copying build/lib/evatool/bin/samtools -> build/bdist.linux-armv7l/wheel/evatool/bin 2021-12-24T12:59:17,639 copying build/lib/evatool/bin/bowtie2-align-s -> build/bdist.linux-armv7l/wheel/evatool/bin 2021-12-24T12:59:18,896 copying build/lib/evatool/bin/bowtie2-align-l -> build/bdist.linux-armv7l/wheel/evatool/bin 2021-12-24T12:59:19,957 copying build/lib/evatool/bin/bowtie2-align-l-debug -> build/bdist.linux-armv7l/wheel/evatool/bin 2021-12-24T12:59:21,534 copying build/lib/evatool/bin/bedtools -> build/bdist.linux-armv7l/wheel/evatool/bin 2021-12-24T12:59:23,720 copying build/lib/evatool/bin/__init__.py -> build/bdist.linux-armv7l/wheel/evatool/bin 2021-12-24T12:59:23,724 copying build/lib/evatool/main.py -> build/bdist.linux-armv7l/wheel/evatool 2021-12-24T12:59:23,729 copying build/lib/evatool/__init__.py -> build/bdist.linux-armv7l/wheel/evatool 2021-12-24T12:59:23,734 creating build/bdist.linux-armv7l/wheel/evatool/utils 2021-12-24T12:59:23,736 copying build/lib/evatool/utils/report.py -> build/bdist.linux-armv7l/wheel/evatool/utils 2021-12-24T12:59:23,742 copying build/lib/evatool/utils/stat.py -> build/bdist.linux-armv7l/wheel/evatool/utils 2021-12-24T12:59:23,746 copying build/lib/evatool/utils/fastq.py -> build/bdist.linux-armv7l/wheel/evatool/utils 2021-12-24T12:59:23,750 copying build/lib/evatool/utils/bam.py -> build/bdist.linux-armv7l/wheel/evatool/utils 2021-12-24T12:59:23,754 copying build/lib/evatool/utils/logger.py -> build/bdist.linux-armv7l/wheel/evatool/utils 2021-12-24T12:59:23,757 copying build/lib/evatool/utils/plot.py -> build/bdist.linux-armv7l/wheel/evatool/utils 2021-12-24T12:59:23,761 copying build/lib/evatool/utils/sam.py -> build/bdist.linux-armv7l/wheel/evatool/utils 2021-12-24T12:59:23,764 copying build/lib/evatool/utils/__init__.py -> build/bdist.linux-armv7l/wheel/evatool/utils 2021-12-24T12:59:23,769 copying build/lib/evatool/utils/config.py -> build/bdist.linux-armv7l/wheel/evatool/utils 2021-12-24T12:59:23,773 copying build/lib/evatool/utils/tag.py -> build/bdist.linux-armv7l/wheel/evatool/utils 2021-12-24T12:59:23,779 creating build/bdist.linux-armv7l/wheel/evatool/resource 2021-12-24T12:59:23,780 copying build/lib/evatool/resource/reference_config.json -> build/bdist.linux-armv7l/wheel/evatool/resource 2021-12-24T12:59:23,784 copying build/lib/evatool/resource/template_report.html -> build/bdist.linux-armv7l/wheel/evatool/resource 2021-12-24T12:59:23,788 copying build/lib/evatool/resource/tool_config.json -> build/bdist.linux-armv7l/wheel/evatool/resource 2021-12-24T12:59:23,791 copying build/lib/evatool/resource/logging.conf -> build/bdist.linux-armv7l/wheel/evatool/resource 2021-12-24T12:59:23,795 copying build/lib/evatool/resource/__init__.py -> build/bdist.linux-armv7l/wheel/evatool/resource 2021-12-24T12:59:23,797 running install_egg_info 2021-12-24T12:59:23,811 Copying evatool.egg-info to build/bdist.linux-armv7l/wheel/evatool-0.1.16-py3.7.egg-info 2021-12-24T12:59:23,837 running install_scripts 2021-12-24T12:59:24,020 adding license file "LICENSE" (matched pattern "LICEN[CS]E*") 2021-12-24T12:59:24,030 creating build/bdist.linux-armv7l/wheel/evatool-0.1.16.dist-info/WHEEL 2021-12-24T12:59:24,035 creating '/tmp/pip-wheel-4w9cbexc/tmpaaxsvbki/evatool-0.1.16-py3-none-any.whl' and adding 'build/bdist.linux-armv7l/wheel' to it 2021-12-24T12:59:24,039 adding 'evatool/__init__.py' 2021-12-24T12:59:24,042 adding 'evatool/main.py' 2021-12-24T12:59:24,045 adding 'evatool/bin/__init__.py' 2021-12-24T12:59:42,604 adding 'evatool/bin/bedtools' 2021-12-24T12:59:43,525 adding 'evatool/bin/bowtie2' 2021-12-24T12:59:51,520 adding 'evatool/bin/bowtie2-align-l' 2021-12-24T13:00:02,816 adding 'evatool/bin/bowtie2-align-l-debug' 2021-12-24T13:00:11,329 adding 'evatool/bin/bowtie2-align-s' 2021-12-24T13:00:22,052 adding 'evatool/bin/bowtie2-align-s-debug' 2021-12-24T13:00:24,434 adding 'evatool/bin/fastq-dump' 2021-12-24T13:00:27,834 adding 'evatool/bin/samtools' 2021-12-24T13:00:28,001 adding 'evatool/bin/trimmomatic-0.39.jar' 2021-12-24T13:00:28,007 adding 'evatool/resource/__init__.py' 2021-12-24T13:00:28,009 adding 'evatool/resource/logging.conf' 2021-12-24T13:00:28,012 adding 'evatool/resource/reference_config.json' 2021-12-24T13:00:28,015 adding 'evatool/resource/template_report.html' 2021-12-24T13:00:28,017 adding 'evatool/resource/tool_config.json' 2021-12-24T13:00:28,021 adding 'evatool/utils/__init__.py' 2021-12-24T13:00:28,023 adding 'evatool/utils/bam.py' 2021-12-24T13:00:28,025 adding 'evatool/utils/config.py' 2021-12-24T13:00:28,028 adding 'evatool/utils/fastq.py' 2021-12-24T13:00:28,030 adding 'evatool/utils/logger.py' 2021-12-24T13:00:28,033 adding 'evatool/utils/plot.py' 2021-12-24T13:00:28,036 adding 'evatool/utils/report.py' 2021-12-24T13:00:28,038 adding 'evatool/utils/sam.py' 2021-12-24T13:00:28,043 adding 'evatool/utils/stat.py' 2021-12-24T13:00:28,046 adding 'evatool/utils/tag.py' 2021-12-24T13:00:28,052 adding 'tests/__init__.py' 2021-12-24T13:00:28,054 adding 'tests/test_bam.py' 2021-12-24T13:00:28,056 adding 'tests/test_config.py' 2021-12-24T13:00:28,058 adding 'tests/test_fastq.py' 2021-12-24T13:00:28,060 adding 'tests/test_plot.py' 2021-12-24T13:00:28,063 adding 'tests/test_report.py' 2021-12-24T13:00:28,065 adding 'tests/test_sam.py' 2021-12-24T13:00:28,067 adding 'tests/test_stat.py' 2021-12-24T13:00:28,069 adding 'tests/test_tag.py' 2021-12-24T13:00:28,083 adding 'evatool-0.1.16.dist-info/LICENSE' 2021-12-24T13:00:28,086 adding 'evatool-0.1.16.dist-info/METADATA' 2021-12-24T13:00:28,088 adding 'evatool-0.1.16.dist-info/WHEEL' 2021-12-24T13:00:28,090 adding 'evatool-0.1.16.dist-info/entry_points.txt' 2021-12-24T13:00:28,091 adding 'evatool-0.1.16.dist-info/top_level.txt' 2021-12-24T13:00:28,093 adding 'evatool-0.1.16.dist-info/RECORD' 2021-12-24T13:00:28,551 removing build/bdist.linux-armv7l/wheel 2021-12-24T13:00:28,714 Error processing line 1 of /tmp/pip-build-env-l4h3gvm5/overlay/lib/python3.7/site-packages/distutils-precedence.pth: 2021-12-24T13:00:28,715 Traceback (most recent call last): 2021-12-24T13:00:28,715 File "/usr/lib/python3.7/site.py", line 174, in addpackage 2021-12-24T13:00:28,715 exec(line) 2021-12-24T13:00:28,716 File "", line 1, in 2021-12-24T13:00:28,716 AttributeError: module '_distutils_hack' has no attribute 'ensure_shim' 2021-12-24T13:00:28,716 Remainder of file ignored 2021-12-24T13:00:28,851 Building wheel for evatool (pyproject.toml): finished with status 'done' 2021-12-24T13:00:31,742 Created wheel for evatool: filename=evatool-0.1.16-py3-none-any.whl size=55173314 sha256=6b10153e89ff8429a167c4ccd2b5dffe1032f3620328a7523c2c61db619b3f17 2021-12-24T13:00:31,743 Stored in directory: /tmp/pip-ephem-wheel-cache-s66c9xfh/wheels/36/d9/bd/aea5a75be66925f1a30b5793068866bc9089eba38fea9a724a 2021-12-24T13:00:31,835 Successfully built evatool 2021-12-24T13:00:35,962 Removed build tracker: '/tmp/pip-req-tracker-1q7ir20b'