2022-01-07T09:35:45,031 Created temporary directory: /tmp/pip-ephem-wheel-cache-f1o57meb 2022-01-07T09:35:45,036 Created temporary directory: /tmp/pip-req-tracker-d74fje1y 2022-01-07T09:35:45,037 Initialized build tracking at /tmp/pip-req-tracker-d74fje1y 2022-01-07T09:35:45,037 Created build tracker: /tmp/pip-req-tracker-d74fje1y 2022-01-07T09:35:45,037 Entered build tracker: /tmp/pip-req-tracker-d74fje1y 2022-01-07T09:35:45,039 Created temporary directory: /tmp/pip-wheel-5cfaqq5b 2022-01-07T09:35:45,107 Looking in indexes: https://pypi.org/simple, https://www.piwheels.org/simple 2022-01-07T09:35:45,112 2 location(s) to search for versions of gctree: 2022-01-07T09:35:45,112 * https://pypi.org/simple/gctree/ 2022-01-07T09:35:45,112 * https://www.piwheels.org/simple/gctree/ 2022-01-07T09:35:45,113 Fetching project page and analyzing links: https://pypi.org/simple/gctree/ 2022-01-07T09:35:45,115 Getting page https://pypi.org/simple/gctree/ 2022-01-07T09:35:45,118 Found index url https://pypi.org/simple 2022-01-07T09:35:45,331 Skipping link: No binaries permitted for gctree: https://files.pythonhosted.org/packages/ae/99/02182436d8b750f44433736c6def868ec8b4dbb93acc3aba44c4a3797560/gctree-3.0.1-py3-none-any.whl#sha256=fcd53765764008087a1e47aa8ebfca40f45ec63ab65a6055740bd3c975d17d02 (from https://pypi.org/simple/gctree/) (requires-python:>=3.7) 2022-01-07T09:35:45,332 Found link https://files.pythonhosted.org/packages/42/42/8c475136eb4148560bf434fcbb57541344ff24911e86b0363ba3f8d0d774/gctree-3.0.1.tar.gz#sha256=c4a78615e2de2380b2cc72778c79c1691f2913a7f4d41b8e72eb93ca082b5714 (from https://pypi.org/simple/gctree/) (requires-python:>=3.7), version: 3.0.1 2022-01-07T09:35:45,333 Skipping link: No binaries permitted for gctree: https://files.pythonhosted.org/packages/50/fd/8395cf1f810b8df1d80217b9704ff5a7566393f1c572a85c516b8939ec16/gctree-3.0.2-py3-none-any.whl#sha256=11757fe240b0f8376f1a7c106e36938a851bfe8e4dc839120be5bac0a4b10076 (from https://pypi.org/simple/gctree/) (requires-python:>=3.7) 2022-01-07T09:35:45,335 Found link https://files.pythonhosted.org/packages/88/03/a88b24d38722395bfa0916db440c28199cfe38c5feedc28d591f89973368/gctree-3.0.2.tar.gz#sha256=fe2fc032ca407bed4555b569350d02a81693c03e754ebcd5c1076dc422f5645e (from https://pypi.org/simple/gctree/) (requires-python:>=3.7), version: 3.0.2 2022-01-07T09:35:45,335 Skipping link: No binaries permitted for gctree: https://files.pythonhosted.org/packages/16/26/255927e682f42e367656ac3141504244ae24a43dd3dab55a097150a8ab16/gctree-3.1.0-py3-none-any.whl#sha256=70112feb4cde67036d51879901a0d1a010f9990b8949da14dc16f85f66328f28 (from https://pypi.org/simple/gctree/) (requires-python:>=3.7) 2022-01-07T09:35:45,336 Found link https://files.pythonhosted.org/packages/17/3d/4dddf5697eb950724df438fedd95b470ae2f608ed5a52ce9584e5e5777d1/gctree-3.1.0.tar.gz#sha256=33ffcc1838d6cfdf8605aa1c10eb6d95a4c7ee78f6c38955c507d4096a33243c (from https://pypi.org/simple/gctree/) (requires-python:>=3.7), version: 3.1.0 2022-01-07T09:35:45,337 Skipping link: No binaries permitted for gctree: https://files.pythonhosted.org/packages/57/fc/206b21564c8d238d1b8858796c0a4376e980c2f6e0a72ead6a1f0629d9df/gctree-3.1.1-py3-none-any.whl#sha256=bae140889a0e63963dc8a1471bed885bc111a3a3adb39b787cc606aa5d409ff0 (from https://pypi.org/simple/gctree/) (requires-python:>=3.7) 2022-01-07T09:35:45,338 Found link https://files.pythonhosted.org/packages/f7/44/cd73e141bd79a548201709dfec05cc872cff8aefaa3b45f49558fd224735/gctree-3.1.1.tar.gz#sha256=235f6143f27f664b76e88b1722778652fee576a30565db6ee0d588e7f50dec3b (from https://pypi.org/simple/gctree/) (requires-python:>=3.7), version: 3.1.1 2022-01-07T09:35:45,339 Skipping link: No binaries permitted for gctree: https://files.pythonhosted.org/packages/01/d7/ea1714fcd01dbc885da7ce8e65895fb698e12574189ab40d0dd3fe79344f/gctree-3.2.0-py3-none-any.whl#sha256=f6ddfe00a7fb764b0eb679f888e33932d1725d2d3dd5635fd74d330ff2bda8ff (from https://pypi.org/simple/gctree/) (requires-python:>=3.7) 2022-01-07T09:35:45,340 Found link https://files.pythonhosted.org/packages/8b/59/ef45e27c111fa0d9ed2c02951018cda4bf04d6a4d23a6a7b59ad2f35b1b4/gctree-3.2.0.tar.gz#sha256=c39a44e57a2026306913d6c5e4762f32e02aee6812a65b1048d51181b6a15210 (from https://pypi.org/simple/gctree/) (requires-python:>=3.7), version: 3.2.0 2022-01-07T09:35:45,341 Skipping link: No binaries permitted for gctree: https://files.pythonhosted.org/packages/05/b9/af1b313b7d21be9ff2375505b90f05324e312142c7f51afd14c40c487555/gctree-3.2.1-py3-none-any.whl#sha256=71010663225272d8b746dc27f9f0b8fa4e23f8a6282b609cd829a08ce26795d2 (from https://pypi.org/simple/gctree/) (requires-python:>=3.7) 2022-01-07T09:35:45,342 Found link https://files.pythonhosted.org/packages/fd/78/f8525323a23e9fc69db323e0684e5e6d06b3bcc8e4237db78e39ea809557/gctree-3.2.1.tar.gz#sha256=97a25b7cb43f3f6ababc645469933037f1765552f4a39cf3e26369165142791e (from https://pypi.org/simple/gctree/) (requires-python:>=3.7), version: 3.2.1 2022-01-07T09:35:45,343 Skipping link: No binaries permitted for gctree: https://files.pythonhosted.org/packages/11/ac/41dd4015cd4e48cd0ac923959c0fa9a20ad9390a993184026e5ce1b3c5f3/gctree-3.3.0-py3-none-any.whl#sha256=67cc66bae791863b08ddd0fda7ecb4cb2772fae7a827510edbc3fda7f1e01dfb (from https://pypi.org/simple/gctree/) (requires-python:>=3.7) 2022-01-07T09:35:45,344 Found link https://files.pythonhosted.org/packages/88/53/f0821a70efdd8e1a605d21fbec29c38a4528ff585f528eb6c9c0c94173cc/gctree-3.3.0.tar.gz#sha256=a03b8bfdc40e45852d3598a0b19c03f7f0348a3361441a8c7ddb475af5515c0c (from https://pypi.org/simple/gctree/) (requires-python:>=3.7), version: 3.3.0 2022-01-07T09:35:45,345 Fetching project page and analyzing links: https://www.piwheels.org/simple/gctree/ 2022-01-07T09:35:45,346 Getting page https://www.piwheels.org/simple/gctree/ 2022-01-07T09:35:45,348 Found index url https://www.piwheels.org/simple 2022-01-07T09:35:45,557 Skipping link: No binaries permitted for gctree: https://www.piwheels.org/simple/gctree/gctree-3.0.1-py3-none-any.whl#sha256=fcd53765764008087a1e47aa8ebfca40f45ec63ab65a6055740bd3c975d17d02 (from https://www.piwheels.org/simple/gctree/) (requires-python:>=3.7) 2022-01-07T09:35:45,557 Skipping link: No binaries permitted for gctree: https://www.piwheels.org/simple/gctree/gctree-3.0.2-py3-none-any.whl#sha256=11757fe240b0f8376f1a7c106e36938a851bfe8e4dc839120be5bac0a4b10076 (from https://www.piwheels.org/simple/gctree/) (requires-python:>=3.7) 2022-01-07T09:35:45,558 Skipping link: No binaries permitted for gctree: https://www.piwheels.org/simple/gctree/gctree-3.1.0-py3-none-any.whl#sha256=a5c951f3fa15a8036dbe97f62c3fc7d5209e10999a4282f60670d62082c1029d (from https://www.piwheels.org/simple/gctree/) (requires-python:>=3.7) 2022-01-07T09:35:45,558 Skipping link: No binaries permitted for gctree: https://www.piwheels.org/simple/gctree/gctree-3.1.1-py3-none-any.whl#sha256=2cf455bc4669922df4f516e5103b60bbb1ac2930d3f43f58769d440bac6b40c0 (from https://www.piwheels.org/simple/gctree/) (requires-python:>=3.7) 2022-01-07T09:35:45,559 Skipping link: No binaries permitted for gctree: https://www.piwheels.org/simple/gctree/gctree-3.2.0-py3-none-any.whl#sha256=e5e4ac94e043f18a1bf3113db15dba4b960179dc19768f26a36d25930ec4a209 (from https://www.piwheels.org/simple/gctree/) (requires-python:>=3.7) 2022-01-07T09:35:45,559 Skipping link: No binaries permitted for gctree: https://www.piwheels.org/simple/gctree/gctree-3.2.1-py3-none-any.whl#sha256=c70b1314390e08e6e42ae5c735ed5c4654968bd291f1d439c6eef474bf6ec097 (from https://www.piwheels.org/simple/gctree/) (requires-python:>=3.7) 2022-01-07T09:35:45,560 Skipping link: not a file: https://www.piwheels.org/simple/gctree/ 2022-01-07T09:35:45,560 Skipping link: not a file: https://pypi.org/simple/gctree/ 2022-01-07T09:35:45,594 Given no hashes to check 1 links for project 'gctree': discarding no candidates 2022-01-07T09:35:45,624 Collecting gctree==3.3.0 2022-01-07T09:35:45,627 Created temporary directory: /tmp/pip-unpack-8rxil8od 2022-01-07T09:35:45,848 Downloading gctree-3.3.0.tar.gz (67 kB) 2022-01-07T09:35:46,001 Added gctree==3.3.0 from https://files.pythonhosted.org/packages/88/53/f0821a70efdd8e1a605d21fbec29c38a4528ff585f528eb6c9c0c94173cc/gctree-3.3.0.tar.gz#sha256=a03b8bfdc40e45852d3598a0b19c03f7f0348a3361441a8c7ddb475af5515c0c to build tracker '/tmp/pip-req-tracker-d74fje1y' 2022-01-07T09:35:46,003 Running setup.py (path:/tmp/pip-wheel-5cfaqq5b/gctree_69d67892ffc64aff879f912a02a041b4/setup.py) egg_info for package gctree 2022-01-07T09:35:46,004 Created temporary directory: /tmp/pip-pip-egg-info-2kt875as 2022-01-07T09:35:46,005 Preparing metadata (setup.py): started 2022-01-07T09:35:46,005 Running command python setup.py egg_info 2022-01-07T09:35:47,909 running egg_info 2022-01-07T09:35:47,913 creating /tmp/pip-pip-egg-info-2kt875as/gctree.egg-info 2022-01-07T09:35:47,914 writing /tmp/pip-pip-egg-info-2kt875as/gctree.egg-info/PKG-INFO 2022-01-07T09:35:47,918 writing dependency_links to /tmp/pip-pip-egg-info-2kt875as/gctree.egg-info/dependency_links.txt 2022-01-07T09:35:47,921 writing entry points to /tmp/pip-pip-egg-info-2kt875as/gctree.egg-info/entry_points.txt 2022-01-07T09:35:47,924 writing requirements to /tmp/pip-pip-egg-info-2kt875as/gctree.egg-info/requires.txt 2022-01-07T09:35:47,925 writing top-level names to /tmp/pip-pip-egg-info-2kt875as/gctree.egg-info/top_level.txt 2022-01-07T09:35:47,928 writing manifest file '/tmp/pip-pip-egg-info-2kt875as/gctree.egg-info/SOURCES.txt' 2022-01-07T09:35:47,941 reading manifest file '/tmp/pip-pip-egg-info-2kt875as/gctree.egg-info/SOURCES.txt' 2022-01-07T09:35:47,946 reading manifest template 'MANIFEST.in' 2022-01-07T09:35:47,948 adding license file 'LICENSE' 2022-01-07T09:35:47,953 writing manifest file '/tmp/pip-pip-egg-info-2kt875as/gctree.egg-info/SOURCES.txt' 2022-01-07T09:35:47,955 /usr/local/lib/python3.7/dist-packages/setuptools/dist.py:493: UserWarning: Normalizing 'v3.3.0' to '3.3.0' 2022-01-07T09:35:47,955 warnings.warn(tmpl.format(**locals())) 2022-01-07T09:35:48,056 Preparing metadata (setup.py): finished with status 'done' 2022-01-07T09:35:48,065 Source in /tmp/pip-wheel-5cfaqq5b/gctree_69d67892ffc64aff879f912a02a041b4 has version 3.3.0, which satisfies requirement gctree==3.3.0 from https://files.pythonhosted.org/packages/88/53/f0821a70efdd8e1a605d21fbec29c38a4528ff585f528eb6c9c0c94173cc/gctree-3.3.0.tar.gz#sha256=a03b8bfdc40e45852d3598a0b19c03f7f0348a3361441a8c7ddb475af5515c0c 2022-01-07T09:35:48,067 Removed gctree==3.3.0 from https://files.pythonhosted.org/packages/88/53/f0821a70efdd8e1a605d21fbec29c38a4528ff585f528eb6c9c0c94173cc/gctree-3.3.0.tar.gz#sha256=a03b8bfdc40e45852d3598a0b19c03f7f0348a3361441a8c7ddb475af5515c0c from build tracker '/tmp/pip-req-tracker-d74fje1y' 2022-01-07T09:35:48,081 Created temporary directory: /tmp/pip-unpack-8hc_0q2i 2022-01-07T09:35:48,082 Building wheels for collected packages: gctree 2022-01-07T09:35:48,090 Created temporary directory: /tmp/pip-wheel-rd57uhhs 2022-01-07T09:35:48,091 Building wheel for gctree (setup.py): started 2022-01-07T09:35:48,091 Destination directory: /tmp/pip-wheel-rd57uhhs 2022-01-07T09:35:48,092 Running command /usr/bin/python3 -u -c 'import io, os, sys, setuptools, tokenize; sys.argv[0] = '"'"'/tmp/pip-wheel-5cfaqq5b/gctree_69d67892ffc64aff879f912a02a041b4/setup.py'"'"'; __file__='"'"'/tmp/pip-wheel-5cfaqq5b/gctree_69d67892ffc64aff879f912a02a041b4/setup.py'"'"';f = getattr(tokenize, '"'"'open'"'"', open)(__file__) if os.path.exists(__file__) else io.StringIO('"'"'from setuptools import setup; setup()'"'"');code = f.read().replace('"'"'\r\n'"'"', '"'"'\n'"'"');f.close();exec(compile(code, __file__, '"'"'exec'"'"'))' bdist_wheel -d /tmp/pip-wheel-rd57uhhs 2022-01-07T09:35:49,897 /usr/local/lib/python3.7/dist-packages/setuptools/dist.py:493: UserWarning: Normalizing 'v3.3.0' to '3.3.0' 2022-01-07T09:35:49,899 warnings.warn(tmpl.format(**locals())) 2022-01-07T09:35:50,003 running bdist_wheel 2022-01-07T09:35:50,012 running build 2022-01-07T09:35:50,013 running build_py 2022-01-07T09:35:50,024 creating build 2022-01-07T09:35:50,025 creating build/lib 2022-01-07T09:35:50,026 creating build/lib/gctree 2022-01-07T09:35:50,028 copying gctree/mutation_model.py -> build/lib/gctree 2022-01-07T09:35:50,033 copying gctree/__init__.py -> build/lib/gctree 2022-01-07T09:35:50,036 copying gctree/utils.py -> build/lib/gctree 2022-01-07T09:35:50,039 copying gctree/mkconfig.py -> build/lib/gctree 2022-01-07T09:35:50,042 copying gctree/cli.py -> build/lib/gctree 2022-01-07T09:35:50,047 copying gctree/deduplicate.py -> build/lib/gctree 2022-01-07T09:35:50,051 copying gctree/isotype.py -> build/lib/gctree 2022-01-07T09:35:50,055 copying gctree/_version.py -> build/lib/gctree 2022-01-07T09:35:50,058 copying gctree/phylip_parse.py -> build/lib/gctree 2022-01-07T09:35:50,062 copying gctree/branching_processes.py -> build/lib/gctree 2022-01-07T09:35:50,068 copying gctree/isotyping.py -> build/lib/gctree 2022-01-07T09:35:50,073 UPDATING build/lib/gctree/_version.py 2022-01-07T09:35:50,075 set build/lib/gctree/_version.py to 'v3.3.0' 2022-01-07T09:35:50,082 /usr/local/lib/python3.7/dist-packages/setuptools/command/install.py:37: SetuptoolsDeprecationWarning: setup.py install is deprecated. Use build and pip and other standards-based tools. 2022-01-07T09:35:50,082 setuptools.SetuptoolsDeprecationWarning, 2022-01-07T09:35:50,086 installing to build/bdist.linux-armv7l/wheel 2022-01-07T09:35:50,087 running install 2022-01-07T09:35:50,089 running install_lib 2022-01-07T09:35:50,096 creating build/bdist.linux-armv7l 2022-01-07T09:35:50,097 creating build/bdist.linux-armv7l/wheel 2022-01-07T09:35:50,100 creating build/bdist.linux-armv7l/wheel/gctree 2022-01-07T09:35:50,102 copying build/lib/gctree/mutation_model.py -> build/bdist.linux-armv7l/wheel/gctree 2022-01-07T09:35:50,106 copying build/lib/gctree/__init__.py -> build/bdist.linux-armv7l/wheel/gctree 2022-01-07T09:35:50,110 copying build/lib/gctree/utils.py -> build/bdist.linux-armv7l/wheel/gctree 2022-01-07T09:35:50,113 copying build/lib/gctree/mkconfig.py -> build/bdist.linux-armv7l/wheel/gctree 2022-01-07T09:35:50,116 copying build/lib/gctree/cli.py -> build/bdist.linux-armv7l/wheel/gctree 2022-01-07T09:35:50,121 copying build/lib/gctree/deduplicate.py -> build/bdist.linux-armv7l/wheel/gctree 2022-01-07T09:35:50,125 copying build/lib/gctree/isotype.py -> build/bdist.linux-armv7l/wheel/gctree 2022-01-07T09:35:50,128 copying build/lib/gctree/_version.py -> build/bdist.linux-armv7l/wheel/gctree 2022-01-07T09:35:50,131 copying build/lib/gctree/phylip_parse.py -> build/bdist.linux-armv7l/wheel/gctree 2022-01-07T09:35:50,135 copying build/lib/gctree/branching_processes.py -> build/bdist.linux-armv7l/wheel/gctree 2022-01-07T09:35:50,141 copying build/lib/gctree/isotyping.py -> build/bdist.linux-armv7l/wheel/gctree 2022-01-07T09:35:50,145 running install_egg_info 2022-01-07T09:35:50,175 running egg_info 2022-01-07T09:35:50,176 writing gctree.egg-info/PKG-INFO 2022-01-07T09:35:50,180 writing dependency_links to gctree.egg-info/dependency_links.txt 2022-01-07T09:35:50,183 writing entry points to gctree.egg-info/entry_points.txt 2022-01-07T09:35:50,185 writing requirements to gctree.egg-info/requires.txt 2022-01-07T09:35:50,187 writing top-level names to gctree.egg-info/top_level.txt 2022-01-07T09:35:50,196 reading manifest file 'gctree.egg-info/SOURCES.txt' 2022-01-07T09:35:50,200 reading manifest template 'MANIFEST.in' 2022-01-07T09:35:50,201 adding license file 'LICENSE' 2022-01-07T09:35:50,207 writing manifest file 'gctree.egg-info/SOURCES.txt' 2022-01-07T09:35:50,209 Copying gctree.egg-info to build/bdist.linux-armv7l/wheel/gctree-3.3.0-py3.7.egg-info 2022-01-07T09:35:50,232 running install_scripts 2022-01-07T09:35:50,402 adding license file "LICENSE" (matched pattern "LICEN[CS]E*") 2022-01-07T09:35:50,412 creating build/bdist.linux-armv7l/wheel/gctree-3.3.0.dist-info/WHEEL 2022-01-07T09:35:50,417 creating '/tmp/pip-wheel-rd57uhhs/gctree-3.3.0-py3-none-any.whl' and adding 'build/bdist.linux-armv7l/wheel' to it 2022-01-07T09:35:50,422 adding 'gctree/__init__.py' 2022-01-07T09:35:50,424 adding 'gctree/_version.py' 2022-01-07T09:35:50,434 adding 'gctree/branching_processes.py' 2022-01-07T09:35:50,443 adding 'gctree/cli.py' 2022-01-07T09:35:50,447 adding 'gctree/deduplicate.py' 2022-01-07T09:35:50,451 adding 'gctree/isotype.py' 2022-01-07T09:35:50,455 adding 'gctree/isotyping.py' 2022-01-07T09:35:50,458 adding 'gctree/mkconfig.py' 2022-01-07T09:35:50,463 adding 'gctree/mutation_model.py' 2022-01-07T09:35:50,468 adding 'gctree/phylip_parse.py' 2022-01-07T09:35:50,470 adding 'gctree/utils.py' 2022-01-07T09:35:50,487 adding 'gctree-3.3.0.dist-info/LICENSE' 2022-01-07T09:35:50,491 adding 'gctree-3.3.0.dist-info/METADATA' 2022-01-07T09:35:50,493 adding 'gctree-3.3.0.dist-info/WHEEL' 2022-01-07T09:35:50,494 adding 'gctree-3.3.0.dist-info/entry_points.txt' 2022-01-07T09:35:50,496 adding 'gctree-3.3.0.dist-info/top_level.txt' 2022-01-07T09:35:50,497 adding 'gctree-3.3.0.dist-info/RECORD' 2022-01-07T09:35:50,500 removing build/bdist.linux-armv7l/wheel 2022-01-07T09:35:50,628 Building wheel for gctree (setup.py): finished with status 'done' 2022-01-07T09:35:50,634 Created wheel for gctree: filename=gctree-3.3.0-py3-none-any.whl size=53254 sha256=ce93398a0f8583409862074ebba81fbe34e794cc3c2becc41634b3054af40be5 2022-01-07T09:35:50,635 Stored in directory: /tmp/pip-ephem-wheel-cache-f1o57meb/wheels/01/59/8e/9dff84ab958cfbcecdf6699c6a21586b1a3fdd914df4a641ba 2022-01-07T09:35:50,662 Successfully built gctree 2022-01-07T09:35:50,671 Removed build tracker: '/tmp/pip-req-tracker-d74fje1y'