2022-01-07T11:35:19,081 Created temporary directory: /tmp/pip-ephem-wheel-cache-hq_j4u7d 2022-01-07T11:35:19,087 Created temporary directory: /tmp/pip-req-tracker-tg_1g6pi 2022-01-07T11:35:19,087 Initialized build tracking at /tmp/pip-req-tracker-tg_1g6pi 2022-01-07T11:35:19,088 Created build tracker: /tmp/pip-req-tracker-tg_1g6pi 2022-01-07T11:35:19,088 Entered build tracker: /tmp/pip-req-tracker-tg_1g6pi 2022-01-07T11:35:19,089 Created temporary directory: /tmp/pip-wheel-l6h7k2_t 2022-01-07T11:35:19,159 Looking in indexes: https://pypi.org/simple, https://www.piwheels.org/simple 2022-01-07T11:35:19,165 2 location(s) to search for versions of sequana-pacbio-qc: 2022-01-07T11:35:19,165 * https://pypi.org/simple/sequana-pacbio-qc/ 2022-01-07T11:35:19,165 * https://www.piwheels.org/simple/sequana-pacbio-qc/ 2022-01-07T11:35:19,166 Fetching project page and analyzing links: https://pypi.org/simple/sequana-pacbio-qc/ 2022-01-07T11:35:19,167 Getting page https://pypi.org/simple/sequana-pacbio-qc/ 2022-01-07T11:35:19,170 Found index url https://pypi.org/simple 2022-01-07T11:35:19,369 Found link https://files.pythonhosted.org/packages/69/a4/21cd9f8edb0c96b180d6bb078baba01dcd8a1eb5ec6b8e17156092f51b05/sequana_pacbio_qc-0.9.0.tar.gz#sha256=edadb3fe844371c9f06595b9efb2cfce2995ad64fbc3155cffd6d38272df551f (from https://pypi.org/simple/sequana-pacbio-qc/), version: 0.9.0 2022-01-07T11:35:19,370 Found link https://files.pythonhosted.org/packages/14/55/46905d4bfd9030b4f532142ef839ca0de03e30e685a3e8d17358018e684b/sequana_pacbio_qc-0.10.0.tar.gz#sha256=3b7d81956a154cf3814a772ceb42d14bf18238b827824ae86c61b948fb95ff8b (from https://pypi.org/simple/sequana-pacbio-qc/), version: 0.10.0 2022-01-07T11:35:19,371 Fetching project page and analyzing links: https://www.piwheels.org/simple/sequana-pacbio-qc/ 2022-01-07T11:35:19,372 Getting page https://www.piwheels.org/simple/sequana-pacbio-qc/ 2022-01-07T11:35:19,374 Found index url https://www.piwheels.org/simple 2022-01-07T11:35:19,592 Skipping link: No binaries permitted for sequana-pacbio-qc: https://www.piwheels.org/simple/sequana-pacbio-qc/sequana_pacbio_qc-0.9.0-py3-none-any.whl#sha256=a0a02bdc1951bac94df4799610d147ada2096f05d9eecb93bc8f385033ed711d (from https://www.piwheels.org/simple/sequana-pacbio-qc/) 2022-01-07T11:35:19,593 Skipping link: not a file: https://www.piwheels.org/simple/sequana-pacbio-qc/ 2022-01-07T11:35:19,593 Skipping link: not a file: https://pypi.org/simple/sequana-pacbio-qc/ 2022-01-07T11:35:19,625 Given no hashes to check 1 links for project 'sequana-pacbio-qc': discarding no candidates 2022-01-07T11:35:19,655 Collecting sequana-pacbio-qc==0.10.0 2022-01-07T11:35:19,658 Created temporary directory: /tmp/pip-unpack-sbmmm3be 2022-01-07T11:35:19,744 Downloading sequana_pacbio_qc-0.10.0.tar.gz (38 kB) 2022-01-07T11:35:19,883 Added sequana-pacbio-qc==0.10.0 from https://files.pythonhosted.org/packages/14/55/46905d4bfd9030b4f532142ef839ca0de03e30e685a3e8d17358018e684b/sequana_pacbio_qc-0.10.0.tar.gz#sha256=3b7d81956a154cf3814a772ceb42d14bf18238b827824ae86c61b948fb95ff8b to build tracker '/tmp/pip-req-tracker-tg_1g6pi' 2022-01-07T11:35:19,884 Running setup.py (path:/tmp/pip-wheel-l6h7k2_t/sequana-pacbio-qc_70104e5db59f4a54bce5f3645f3a4f19/setup.py) egg_info for package sequana-pacbio-qc 2022-01-07T11:35:19,885 Created temporary directory: /tmp/pip-pip-egg-info-27cpaz9c 2022-01-07T11:35:19,886 Preparing metadata (setup.py): started 2022-01-07T11:35:19,887 Running command python setup.py egg_info 2022-01-07T11:35:21,731 running egg_info 2022-01-07T11:35:21,736 creating /tmp/pip-pip-egg-info-27cpaz9c/sequana_pacbio_qc.egg-info 2022-01-07T11:35:21,738 writing /tmp/pip-pip-egg-info-27cpaz9c/sequana_pacbio_qc.egg-info/PKG-INFO 2022-01-07T11:35:21,744 writing dependency_links to /tmp/pip-pip-egg-info-27cpaz9c/sequana_pacbio_qc.egg-info/dependency_links.txt 2022-01-07T11:35:21,747 writing entry points to /tmp/pip-pip-egg-info-27cpaz9c/sequana_pacbio_qc.egg-info/entry_points.txt 2022-01-07T11:35:21,749 writing requirements to /tmp/pip-pip-egg-info-27cpaz9c/sequana_pacbio_qc.egg-info/requires.txt 2022-01-07T11:35:21,751 writing top-level names to /tmp/pip-pip-egg-info-27cpaz9c/sequana_pacbio_qc.egg-info/top_level.txt 2022-01-07T11:35:21,754 writing manifest file '/tmp/pip-pip-egg-info-27cpaz9c/sequana_pacbio_qc.egg-info/SOURCES.txt' 2022-01-07T11:35:21,781 reading manifest file '/tmp/pip-pip-egg-info-27cpaz9c/sequana_pacbio_qc.egg-info/SOURCES.txt' 2022-01-07T11:35:21,784 reading manifest template 'MANIFEST.in' 2022-01-07T11:35:21,786 warning: no previously-included files matching '__pycache__' found under directory '*' 2022-01-07T11:35:21,788 warning: no previously-included files matching '*pyc' found under directory '*' 2022-01-07T11:35:21,789 warning: no previously-included files matching '*' found under directory 'test' 2022-01-07T11:35:21,792 adding license file 'LICENSE' 2022-01-07T11:35:21,797 writing manifest file '/tmp/pip-pip-egg-info-27cpaz9c/sequana_pacbio_qc.egg-info/SOURCES.txt' 2022-01-07T11:35:21,900 Preparing metadata (setup.py): finished with status 'done' 2022-01-07T11:35:21,909 Source in /tmp/pip-wheel-l6h7k2_t/sequana-pacbio-qc_70104e5db59f4a54bce5f3645f3a4f19 has version 0.10.0, which satisfies requirement sequana-pacbio-qc==0.10.0 from https://files.pythonhosted.org/packages/14/55/46905d4bfd9030b4f532142ef839ca0de03e30e685a3e8d17358018e684b/sequana_pacbio_qc-0.10.0.tar.gz#sha256=3b7d81956a154cf3814a772ceb42d14bf18238b827824ae86c61b948fb95ff8b 2022-01-07T11:35:21,911 Removed sequana-pacbio-qc==0.10.0 from https://files.pythonhosted.org/packages/14/55/46905d4bfd9030b4f532142ef839ca0de03e30e685a3e8d17358018e684b/sequana_pacbio_qc-0.10.0.tar.gz#sha256=3b7d81956a154cf3814a772ceb42d14bf18238b827824ae86c61b948fb95ff8b from build tracker '/tmp/pip-req-tracker-tg_1g6pi' 2022-01-07T11:35:21,921 Created temporary directory: /tmp/pip-unpack-45k3b8um 2022-01-07T11:35:21,922 Building wheels for collected packages: sequana-pacbio-qc 2022-01-07T11:35:21,930 Created temporary directory: /tmp/pip-wheel-lzgerdgt 2022-01-07T11:35:21,931 Building wheel for sequana-pacbio-qc (setup.py): started 2022-01-07T11:35:21,932 Destination directory: /tmp/pip-wheel-lzgerdgt 2022-01-07T11:35:21,932 Running command /usr/bin/python3 -u -c 'import io, os, sys, setuptools, tokenize; sys.argv[0] = '"'"'/tmp/pip-wheel-l6h7k2_t/sequana-pacbio-qc_70104e5db59f4a54bce5f3645f3a4f19/setup.py'"'"'; __file__='"'"'/tmp/pip-wheel-l6h7k2_t/sequana-pacbio-qc_70104e5db59f4a54bce5f3645f3a4f19/setup.py'"'"';f = getattr(tokenize, '"'"'open'"'"', open)(__file__) if os.path.exists(__file__) else io.StringIO('"'"'from setuptools import setup; setup()'"'"');code = f.read().replace('"'"'\r\n'"'"', '"'"'\n'"'"');f.close();exec(compile(code, __file__, '"'"'exec'"'"'))' bdist_wheel -d /tmp/pip-wheel-lzgerdgt 2022-01-07T11:35:23,767 running bdist_wheel 2022-01-07T11:35:23,776 running build 2022-01-07T11:35:23,776 running build_py 2022-01-07T11:35:23,784 creating build 2022-01-07T11:35:23,785 creating build/lib 2022-01-07T11:35:23,786 creating build/lib/sequana_pipelines 2022-01-07T11:35:23,787 creating build/lib/sequana_pipelines/pacbio_qc 2022-01-07T11:35:23,789 copying sequana_pipelines/pacbio_qc/__init__.py -> build/lib/sequana_pipelines/pacbio_qc 2022-01-07T11:35:23,793 copying sequana_pipelines/pacbio_qc/main.py -> build/lib/sequana_pipelines/pacbio_qc 2022-01-07T11:35:23,807 copying sequana_pipelines/pacbio_qc/config.yaml -> build/lib/sequana_pipelines/pacbio_qc 2022-01-07T11:35:23,810 copying sequana_pipelines/pacbio_qc/multiqc_config.yaml -> build/lib/sequana_pipelines/pacbio_qc 2022-01-07T11:35:23,815 copying sequana_pipelines/pacbio_qc/schema.yaml -> build/lib/sequana_pipelines/pacbio_qc 2022-01-07T11:35:23,819 copying sequana_pipelines/pacbio_qc/pacbio_qc.rules -> build/lib/sequana_pipelines/pacbio_qc 2022-01-07T11:35:23,823 copying sequana_pipelines/pacbio_qc/requirements.txt -> build/lib/sequana_pipelines/pacbio_qc 2022-01-07T11:35:23,827 copying sequana_pipelines/pacbio_qc/dag.png -> build/lib/sequana_pipelines/pacbio_qc 2022-01-07T11:35:23,839 /usr/local/lib/python3.7/dist-packages/setuptools/command/install.py:37: SetuptoolsDeprecationWarning: setup.py install is deprecated. Use build and pip and other standards-based tools. 2022-01-07T11:35:23,840 setuptools.SetuptoolsDeprecationWarning, 2022-01-07T11:35:23,844 installing to build/bdist.linux-armv7l/wheel 2022-01-07T11:35:23,844 running install 2022-01-07T11:35:23,846 running install_lib 2022-01-07T11:35:23,856 creating build/bdist.linux-armv7l 2022-01-07T11:35:23,857 creating build/bdist.linux-armv7l/wheel 2022-01-07T11:35:23,860 creating build/bdist.linux-armv7l/wheel/sequana_pipelines 2022-01-07T11:35:23,863 creating build/bdist.linux-armv7l/wheel/sequana_pipelines/pacbio_qc 2022-01-07T11:35:23,864 copying build/lib/sequana_pipelines/pacbio_qc/config.yaml -> build/bdist.linux-armv7l/wheel/sequana_pipelines/pacbio_qc 2022-01-07T11:35:23,868 copying build/lib/sequana_pipelines/pacbio_qc/pacbio_qc.rules -> build/bdist.linux-armv7l/wheel/sequana_pipelines/pacbio_qc 2022-01-07T11:35:23,872 copying build/lib/sequana_pipelines/pacbio_qc/multiqc_config.yaml -> build/bdist.linux-armv7l/wheel/sequana_pipelines/pacbio_qc 2022-01-07T11:35:23,876 copying build/lib/sequana_pipelines/pacbio_qc/requirements.txt -> build/bdist.linux-armv7l/wheel/sequana_pipelines/pacbio_qc 2022-01-07T11:35:23,879 copying build/lib/sequana_pipelines/pacbio_qc/__init__.py -> build/bdist.linux-armv7l/wheel/sequana_pipelines/pacbio_qc 2022-01-07T11:35:23,882 copying build/lib/sequana_pipelines/pacbio_qc/main.py -> build/bdist.linux-armv7l/wheel/sequana_pipelines/pacbio_qc 2022-01-07T11:35:23,886 copying build/lib/sequana_pipelines/pacbio_qc/schema.yaml -> build/bdist.linux-armv7l/wheel/sequana_pipelines/pacbio_qc 2022-01-07T11:35:23,889 copying build/lib/sequana_pipelines/pacbio_qc/dag.png -> build/bdist.linux-armv7l/wheel/sequana_pipelines/pacbio_qc 2022-01-07T11:35:23,893 running install_egg_info 2022-01-07T11:35:23,931 running egg_info 2022-01-07T11:35:23,932 writing sequana_pacbio_qc.egg-info/PKG-INFO 2022-01-07T11:35:23,936 writing dependency_links to sequana_pacbio_qc.egg-info/dependency_links.txt 2022-01-07T11:35:23,940 writing entry points to sequana_pacbio_qc.egg-info/entry_points.txt 2022-01-07T11:35:23,942 writing requirements to sequana_pacbio_qc.egg-info/requires.txt 2022-01-07T11:35:23,943 writing top-level names to sequana_pacbio_qc.egg-info/top_level.txt 2022-01-07T11:35:23,956 reading manifest file 'sequana_pacbio_qc.egg-info/SOURCES.txt' 2022-01-07T11:35:23,962 reading manifest template 'MANIFEST.in' 2022-01-07T11:35:23,965 warning: no previously-included files matching '__pycache__' found under directory '*' 2022-01-07T11:35:23,966 warning: no previously-included files matching '*pyc' found under directory '*' 2022-01-07T11:35:23,967 warning: no previously-included files matching '*' found under directory 'test' 2022-01-07T11:35:23,970 adding license file 'LICENSE' 2022-01-07T11:35:23,976 writing manifest file 'sequana_pacbio_qc.egg-info/SOURCES.txt' 2022-01-07T11:35:23,979 Copying sequana_pacbio_qc.egg-info to build/bdist.linux-armv7l/wheel/sequana_pacbio_qc-0.10.0-py3.7.egg-info 2022-01-07T11:35:24,006 running install_scripts 2022-01-07T11:35:24,168 adding license file "LICENSE" (matched pattern "LICEN[CS]E*") 2022-01-07T11:35:24,177 creating build/bdist.linux-armv7l/wheel/sequana_pacbio_qc-0.10.0.dist-info/WHEEL 2022-01-07T11:35:24,181 creating '/tmp/pip-wheel-lzgerdgt/sequana_pacbio_qc-0.10.0-py3-none-any.whl' and adding 'build/bdist.linux-armv7l/wheel' to it 2022-01-07T11:35:24,189 adding 'sequana_pipelines/pacbio_qc/__init__.py' 2022-01-07T11:35:24,191 adding 'sequana_pipelines/pacbio_qc/config.yaml' 2022-01-07T11:35:24,197 adding 'sequana_pipelines/pacbio_qc/dag.png' 2022-01-07T11:35:24,200 adding 'sequana_pipelines/pacbio_qc/main.py' 2022-01-07T11:35:24,203 adding 'sequana_pipelines/pacbio_qc/multiqc_config.yaml' 2022-01-07T11:35:24,207 adding 'sequana_pipelines/pacbio_qc/pacbio_qc.rules' 2022-01-07T11:35:24,209 adding 'sequana_pipelines/pacbio_qc/requirements.txt' 2022-01-07T11:35:24,211 adding 'sequana_pipelines/pacbio_qc/schema.yaml' 2022-01-07T11:35:24,213 adding 'sequana_pacbio_qc-0.10.0.dist-info/LICENSE' 2022-01-07T11:35:24,216 adding 'sequana_pacbio_qc-0.10.0.dist-info/METADATA' 2022-01-07T11:35:24,217 adding 'sequana_pacbio_qc-0.10.0.dist-info/WHEEL' 2022-01-07T11:35:24,219 adding 'sequana_pacbio_qc-0.10.0.dist-info/entry_points.txt' 2022-01-07T11:35:24,220 adding 'sequana_pacbio_qc-0.10.0.dist-info/top_level.txt' 2022-01-07T11:35:24,221 adding 'sequana_pacbio_qc-0.10.0.dist-info/RECORD' 2022-01-07T11:35:24,225 removing build/bdist.linux-armv7l/wheel 2022-01-07T11:35:24,350 Building wheel for sequana-pacbio-qc (setup.py): finished with status 'done' 2022-01-07T11:35:24,355 Created wheel for sequana-pacbio-qc: filename=sequana_pacbio_qc-0.10.0-py3-none-any.whl size=30740 sha256=1cbb91c8d0e78c84ae520116b43cef9cbfe142f8ce9e9ee9a1505bbf0914bdd9 2022-01-07T11:35:24,356 Stored in directory: /tmp/pip-ephem-wheel-cache-hq_j4u7d/wheels/64/b4/88/a8995840029376e33ba90f8b3229b1bd5fdfac17caf17df367 2022-01-07T11:35:24,378 Successfully built sequana-pacbio-qc 2022-01-07T11:35:24,387 Removed build tracker: '/tmp/pip-req-tracker-tg_1g6pi'