2022-01-10T12:39:55,924 Created temporary directory: /tmp/pip-ephem-wheel-cache-jeq8efs2 2022-01-10T12:39:55,930 Created temporary directory: /tmp/pip-req-tracker-8igalsap 2022-01-10T12:39:55,931 Initialized build tracking at /tmp/pip-req-tracker-8igalsap 2022-01-10T12:39:55,931 Created build tracker: /tmp/pip-req-tracker-8igalsap 2022-01-10T12:39:55,931 Entered build tracker: /tmp/pip-req-tracker-8igalsap 2022-01-10T12:39:55,932 Created temporary directory: /tmp/pip-wheel-fs0vnl76 2022-01-10T12:39:55,995 Looking in indexes: https://pypi.org/simple, https://www.piwheels.org/simple 2022-01-10T12:39:56,000 2 location(s) to search for versions of superpang: 2022-01-10T12:39:56,000 * https://pypi.org/simple/superpang/ 2022-01-10T12:39:56,000 * https://www.piwheels.org/simple/superpang/ 2022-01-10T12:39:56,001 Fetching project page and analyzing links: https://pypi.org/simple/superpang/ 2022-01-10T12:39:56,002 Getting page https://pypi.org/simple/superpang/ 2022-01-10T12:39:56,005 Found index url https://pypi.org/simple 2022-01-10T12:39:56,200 Found link https://files.pythonhosted.org/packages/9c/57/83a3974eb6f1728623e29d7fc3c5f3ccb0702c44d756e2b1f6f1b92798e1/SuperPang-0.7.0.post1.tar.gz#sha256=66dc5c719116910f583d0ff2232e7d726e1d7ec87ddc3eb0c2b96223d557fa76 (from https://pypi.org/simple/superpang/) (requires-python:>=3.8), version: 0.7.0.post1 2022-01-10T12:39:56,201 Found link https://files.pythonhosted.org/packages/e8/23/ca26f8c2506d465d8b8383c1b8b60d052a2f86b58de691502e328dc925b0/SuperPang-0.8.0.tar.gz#sha256=43008682242c2d1620b6bd917f4efc5b482dfd0a28bcfe9495dc1801b06c8ef4 (from https://pypi.org/simple/superpang/) (requires-python:>=3.8), version: 0.8.0 2022-01-10T12:39:56,202 Found link https://files.pythonhosted.org/packages/4a/4f/ece0df30b902a9e6ff8d63632251d4c67ecd909cd7bde08a142d56a24880/SuperPang-0.8.1.tar.gz#sha256=28c713b15a3bd3fb2dd7548a815acb91168dca2e765a5a213cc7c13ef85b5d3d (from https://pypi.org/simple/superpang/) (requires-python:>=3.8), version: 0.8.1 2022-01-10T12:39:56,203 Fetching project page and analyzing links: https://www.piwheels.org/simple/superpang/ 2022-01-10T12:39:56,204 Getting page https://www.piwheels.org/simple/superpang/ 2022-01-10T12:39:56,205 Found index url https://www.piwheels.org/simple 2022-01-10T12:39:56,429 Skipping link: No binaries permitted for superpang: https://www.piwheels.org/simple/superpang/SuperPang-0.7.0.post1-py3-none-any.whl#sha256=7b5427f75343e311a397b472cfed232b2549783866aa715ac6cee45857734501 (from https://www.piwheels.org/simple/superpang/) (requires-python:>=3.8) 2022-01-10T12:39:56,429 Skipping link: not a file: https://www.piwheels.org/simple/superpang/ 2022-01-10T12:39:56,430 Skipping link: not a file: https://pypi.org/simple/superpang/ 2022-01-10T12:39:56,470 Given no hashes to check 1 links for project 'superpang': discarding no candidates 2022-01-10T12:39:56,506 Collecting superpang==0.8.1 2022-01-10T12:39:56,509 Created temporary directory: /tmp/pip-unpack-bd9r98kj 2022-01-10T12:39:57,163 Downloading SuperPang-0.8.1.tar.gz (6.3 MB) 2022-01-10T12:40:00,517 Added superpang==0.8.1 from https://files.pythonhosted.org/packages/4a/4f/ece0df30b902a9e6ff8d63632251d4c67ecd909cd7bde08a142d56a24880/SuperPang-0.8.1.tar.gz#sha256=28c713b15a3bd3fb2dd7548a815acb91168dca2e765a5a213cc7c13ef85b5d3d to build tracker '/tmp/pip-req-tracker-8igalsap' 2022-01-10T12:40:00,519 Running setup.py (path:/tmp/pip-wheel-fs0vnl76/superpang_29c90864441f4526a0d60c3f3b601019/setup.py) egg_info for package superpang 2022-01-10T12:40:00,520 Created temporary directory: /tmp/pip-pip-egg-info-sojljb_x 2022-01-10T12:40:00,521 Preparing metadata (setup.py): started 2022-01-10T12:40:00,521 Running command python setup.py egg_info 2022-01-10T12:40:02,152 running egg_info 2022-01-10T12:40:02,156 creating /tmp/pip-pip-egg-info-sojljb_x/SuperPang.egg-info 2022-01-10T12:40:02,157 writing /tmp/pip-pip-egg-info-sojljb_x/SuperPang.egg-info/PKG-INFO 2022-01-10T12:40:02,161 writing dependency_links to /tmp/pip-pip-egg-info-sojljb_x/SuperPang.egg-info/dependency_links.txt 2022-01-10T12:40:02,165 writing requirements to /tmp/pip-pip-egg-info-sojljb_x/SuperPang.egg-info/requires.txt 2022-01-10T12:40:02,166 writing top-level names to /tmp/pip-pip-egg-info-sojljb_x/SuperPang.egg-info/top_level.txt 2022-01-10T12:40:02,169 writing manifest file '/tmp/pip-pip-egg-info-sojljb_x/SuperPang.egg-info/SOURCES.txt' 2022-01-10T12:40:02,552 reading manifest file '/tmp/pip-pip-egg-info-sojljb_x/SuperPang.egg-info/SOURCES.txt' 2022-01-10T12:40:02,555 reading manifest template 'MANIFEST.in' 2022-01-10T12:40:02,559 adding license file 'LICENSE' 2022-01-10T12:40:02,563 writing manifest file '/tmp/pip-pip-egg-info-sojljb_x/SuperPang.egg-info/SOURCES.txt' 2022-01-10T12:40:02,676 Preparing metadata (setup.py): finished with status 'done' 2022-01-10T12:40:02,684 Source in /tmp/pip-wheel-fs0vnl76/superpang_29c90864441f4526a0d60c3f3b601019 has version 0.8.1, which satisfies requirement superpang==0.8.1 from https://files.pythonhosted.org/packages/4a/4f/ece0df30b902a9e6ff8d63632251d4c67ecd909cd7bde08a142d56a24880/SuperPang-0.8.1.tar.gz#sha256=28c713b15a3bd3fb2dd7548a815acb91168dca2e765a5a213cc7c13ef85b5d3d 2022-01-10T12:40:02,685 Removed superpang==0.8.1 from https://files.pythonhosted.org/packages/4a/4f/ece0df30b902a9e6ff8d63632251d4c67ecd909cd7bde08a142d56a24880/SuperPang-0.8.1.tar.gz#sha256=28c713b15a3bd3fb2dd7548a815acb91168dca2e765a5a213cc7c13ef85b5d3d from build tracker '/tmp/pip-req-tracker-8igalsap' 2022-01-10T12:40:02,704 Created temporary directory: /tmp/pip-unpack-zv834bt6 2022-01-10T12:40:02,705 Building wheels for collected packages: superpang 2022-01-10T12:40:02,712 Created temporary directory: /tmp/pip-wheel-bvdq4j1e 2022-01-10T12:40:02,713 Building wheel for superpang (setup.py): started 2022-01-10T12:40:02,714 Destination directory: /tmp/pip-wheel-bvdq4j1e 2022-01-10T12:40:02,714 Running command /usr/bin/python3 -u -c 'import io, os, sys, setuptools, tokenize; sys.argv[0] = '"'"'/tmp/pip-wheel-fs0vnl76/superpang_29c90864441f4526a0d60c3f3b601019/setup.py'"'"'; __file__='"'"'/tmp/pip-wheel-fs0vnl76/superpang_29c90864441f4526a0d60c3f3b601019/setup.py'"'"';f = getattr(tokenize, '"'"'open'"'"', open)(__file__) if os.path.exists(__file__) else io.StringIO('"'"'from setuptools import setup; setup()'"'"');code = f.read().replace('"'"'\r\n'"'"', '"'"'\n'"'"');f.close();exec(compile(code, __file__, '"'"'exec'"'"'))' bdist_wheel -d /tmp/pip-wheel-bvdq4j1e 2022-01-10T12:40:04,411 running bdist_wheel 2022-01-10T12:40:04,754 running build 2022-01-10T12:40:04,754 running build_py 2022-01-10T12:40:04,762 creating build 2022-01-10T12:40:04,762 creating build/lib.linux-armv7l-3.9 2022-01-10T12:40:04,764 creating build/lib.linux-armv7l-3.9/SuperPang 2022-01-10T12:40:04,766 copying SuperPang/__init__.py -> build/lib.linux-armv7l-3.9/SuperPang 2022-01-10T12:40:04,771 creating build/lib.linux-armv7l-3.9/SuperPang/lib 2022-01-10T12:40:04,772 copying SuperPang/lib/Assembler.py -> build/lib.linux-armv7l-3.9/SuperPang/lib 2022-01-10T12:40:04,780 copying SuperPang/lib/utils.py -> build/lib.linux-armv7l-3.9/SuperPang/lib 2022-01-10T12:40:04,783 copying SuperPang/lib/__init__.py -> build/lib.linux-armv7l-3.9/SuperPang/lib 2022-01-10T12:40:04,785 running egg_info 2022-01-10T12:40:04,801 writing SuperPang.egg-info/PKG-INFO 2022-01-10T12:40:04,805 writing dependency_links to SuperPang.egg-info/dependency_links.txt 2022-01-10T12:40:04,808 writing requirements to SuperPang.egg-info/requires.txt 2022-01-10T12:40:04,810 writing top-level names to SuperPang.egg-info/top_level.txt 2022-01-10T12:40:04,823 reading manifest file 'SuperPang.egg-info/SOURCES.txt' 2022-01-10T12:40:04,827 reading manifest template 'MANIFEST.in' 2022-01-10T12:40:04,830 adding license file 'LICENSE' 2022-01-10T12:40:04,836 writing manifest file 'SuperPang.egg-info/SOURCES.txt' 2022-01-10T12:40:04,842 creating build/lib.linux-armv7l-3.9/SuperPang/scripts 2022-01-10T12:40:04,844 copying SuperPang/scripts/SuperPang.py -> build/lib.linux-armv7l-3.9/SuperPang/scripts 2022-01-10T12:40:04,849 copying SuperPang/scripts/condense-edges.py -> build/lib.linux-armv7l-3.9/SuperPang/scripts 2022-01-10T12:40:04,853 copying SuperPang/scripts/homogenize.py -> build/lib.linux-armv7l-3.9/SuperPang/scripts 2022-01-10T12:40:04,858 copying SuperPang/scripts/test-SuperPang.py -> build/lib.linux-armv7l-3.9/SuperPang/scripts 2022-01-10T12:40:04,861 creating build/lib.linux-armv7l-3.9/SuperPang/test_data 2022-01-10T12:40:04,863 copying SuperPang/test_data/2636415981.fna -> build/lib.linux-armv7l-3.9/SuperPang/test_data 2022-01-10T12:40:04,964 copying SuperPang/test_data/2636416036.fna -> build/lib.linux-armv7l-3.9/SuperPang/test_data 2022-01-10T12:40:05,058 copying SuperPang/test_data/2636416061.fna -> build/lib.linux-armv7l-3.9/SuperPang/test_data 2022-01-10T12:40:05,177 copying SuperPang/test_data/2636416062.fna -> build/lib.linux-armv7l-3.9/SuperPang/test_data 2022-01-10T12:40:05,301 copying SuperPang/test_data/2639762512.fna -> build/lib.linux-armv7l-3.9/SuperPang/test_data 2022-01-10T12:40:05,417 copying SuperPang/test_data/2639762514.fna -> build/lib.linux-armv7l-3.9/SuperPang/test_data 2022-01-10T12:40:05,534 copying SuperPang/test_data/2639762515.fna -> build/lib.linux-armv7l-3.9/SuperPang/test_data 2022-01-10T12:40:05,655 copying SuperPang/test_data/2639762516.fna -> build/lib.linux-armv7l-3.9/SuperPang/test_data 2022-01-10T12:40:05,784 copying SuperPang/test_data/2844342787.fna -> build/lib.linux-armv7l-3.9/SuperPang/test_data 2022-01-10T12:40:05,898 copying SuperPang/lib/Compressor.c -> build/lib.linux-armv7l-3.9/SuperPang/lib 2022-01-10T12:40:05,952 running build_ext 2022-01-10T12:40:05,961 building 'SuperPang.lib.Compressor' extension 2022-01-10T12:40:05,961 creating build/temp.linux-armv7l-3.9 2022-01-10T12:40:05,962 creating build/temp.linux-armv7l-3.9/SuperPang 2022-01-10T12:40:05,963 creating build/temp.linux-armv7l-3.9/SuperPang/lib 2022-01-10T12:40:05,964 arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -ffile-prefix-map=/build/python3.9-jS0VHk/python3.9-3.9.2=. -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -g -ffile-prefix-map=/build/python3.9-jS0VHk/python3.9-3.9.2=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -I/usr/include/python3.9 -c SuperPang/lib/Compressor.c -o build/temp.linux-armv7l-3.9/SuperPang/lib/Compressor.o 2022-01-10T12:40:06,755 SuperPang/lib/Compressor.c:633:10: fatal error: numpy/arrayobject.h: No such file or directory 2022-01-10T12:40:06,755 633 | #include "numpy/arrayobject.h" 2022-01-10T12:40:06,756 | ^~~~~~~~~~~~~~~~~~~~~ 2022-01-10T12:40:06,756 compilation terminated. 2022-01-10T12:40:06,766 error: command '/usr/bin/arm-linux-gnueabihf-gcc' failed with exit code 1 2022-01-10T12:40:06,903 Building wheel for superpang (setup.py): finished with status 'error' 2022-01-10T12:40:06,904 ERROR: Failed building wheel for superpang 2022-01-10T12:40:06,906 Running setup.py clean for superpang 2022-01-10T12:40:06,906 Running command /usr/bin/python3 -u -c 'import io, os, sys, setuptools, tokenize; sys.argv[0] = '"'"'/tmp/pip-wheel-fs0vnl76/superpang_29c90864441f4526a0d60c3f3b601019/setup.py'"'"'; __file__='"'"'/tmp/pip-wheel-fs0vnl76/superpang_29c90864441f4526a0d60c3f3b601019/setup.py'"'"';f = getattr(tokenize, '"'"'open'"'"', open)(__file__) if os.path.exists(__file__) else io.StringIO('"'"'from setuptools import setup; setup()'"'"');code = f.read().replace('"'"'\r\n'"'"', '"'"'\n'"'"');f.close();exec(compile(code, __file__, '"'"'exec'"'"'))' clean --all 2022-01-10T12:40:08,524 running clean 2022-01-10T12:40:08,527 removing 'build/temp.linux-armv7l-3.9' (and everything under it) 2022-01-10T12:40:08,532 removing 'build/lib.linux-armv7l-3.9' (and everything under it) 2022-01-10T12:40:08,568 'build/bdist.linux-armv7l' does not exist -- can't clean it 2022-01-10T12:40:08,569 'build/scripts-3.9' does not exist -- can't clean it 2022-01-10T12:40:08,570 removing 'build' 2022-01-10T12:40:08,669 Failed to build superpang 2022-01-10T12:40:08,670 ERROR: Failed to build one or more wheels 2022-01-10T12:40:08,671 Exception information: 2022-01-10T12:40:08,671 Traceback (most recent call last): 2022-01-10T12:40:08,671 File "/usr/local/lib/python3.9/dist-packages/pip/_internal/cli/base_command.py", line 164, in exc_logging_wrapper 2022-01-10T12:40:08,671 status = run_func(*args) 2022-01-10T12:40:08,671 File "/usr/local/lib/python3.9/dist-packages/pip/_internal/cli/req_command.py", line 205, in wrapper 2022-01-10T12:40:08,671 return func(self, options, args) 2022-01-10T12:40:08,671 File "/usr/local/lib/python3.9/dist-packages/pip/_internal/commands/wheel.py", line 175, in run 2022-01-10T12:40:08,671 raise CommandError("Failed to build one or more wheels") 2022-01-10T12:40:08,671 pip._internal.exceptions.CommandError: Failed to build one or more wheels 2022-01-10T12:40:08,677 Removed build tracker: '/tmp/pip-req-tracker-8igalsap'