2022-01-18T12:37:54,433 Created temporary directory: /tmp/pip-ephem-wheel-cache-d0wsowv4
2022-01-18T12:37:54,439 Created temporary directory: /tmp/pip-req-tracker-xbfk43gx
2022-01-18T12:37:54,440 Initialized build tracking at /tmp/pip-req-tracker-xbfk43gx
2022-01-18T12:37:54,440 Created build tracker: /tmp/pip-req-tracker-xbfk43gx
2022-01-18T12:37:54,441 Entered build tracker: /tmp/pip-req-tracker-xbfk43gx
2022-01-18T12:37:54,442 Created temporary directory: /tmp/pip-wheel-xi8jhi2r
2022-01-18T12:37:54,510 Looking in indexes: https://pypi.org/simple, https://www.piwheels.org/simple
2022-01-18T12:37:54,515 2 location(s) to search for versions of maicos:
2022-01-18T12:37:54,515 * https://pypi.org/simple/maicos/
2022-01-18T12:37:54,515 * https://www.piwheels.org/simple/maicos/
2022-01-18T12:37:54,516 Fetching project page and analyzing links: https://pypi.org/simple/maicos/
2022-01-18T12:37:54,517 Getting page https://pypi.org/simple/maicos/
2022-01-18T12:37:54,521 Found index url https://pypi.org/simple
2022-01-18T12:37:54,729   Found link https://files.pythonhosted.org/packages/ea/c4/8c22e710d2354fad41121756c965dbb03bb829aaa512655b75fcd3d31286/maicos-0.2.tar.gz#sha256=d71541de31ac6bba4e10772f09dc0a695d0f096800fea9a7efe3daa05ee881be (from https://pypi.org/simple/maicos/) (requires-python:>=3.6), version: 0.2
2022-01-18T12:37:54,731   Link requires a different Python (3.9.2 not in: '>=3.6, <3.9'): https://files.pythonhosted.org/packages/b6/dd/ccdcff2804dd1de2b953499290b2e013b01726329b40af02c68b0e014c1c/maicos-0.3.tar.gz#sha256=678ce80efaaa056dc2eb1c576da806ab463ee5a59f0c0a709a565fd72f99c32a (from https://pypi.org/simple/maicos/) (requires-python:>=3.6, <3.9)
2022-01-18T12:37:54,732   Found link https://files.pythonhosted.org/packages/72/ad/5e76df491fabe71aece3de83a3d68ed49d474067ddeb216c31bd9eabd084/maicos-0.4.tar.gz#sha256=51305e6bd37c615e19247ae6d22f9b7c74688171ffce310f70dd6816ca377e56 (from https://pypi.org/simple/maicos/) (requires-python:>=3.6), version: 0.4
2022-01-18T12:37:54,733   Found link https://files.pythonhosted.org/packages/7b/b4/5cbb6d2d74c51604053b656e8787528e3019cd8f7b3ce04848efbc90f893/maicos-0.4.1.tar.gz#sha256=983cc39a0a541dc6a906d18658ca6d2650c60e56b731f93291dbaa3a078807dc (from https://pypi.org/simple/maicos/) (requires-python:>=3.6), version: 0.4.1
2022-01-18T12:37:54,734 Fetching project page and analyzing links: https://www.piwheels.org/simple/maicos/
2022-01-18T12:37:54,735 Getting page https://www.piwheels.org/simple/maicos/
2022-01-18T12:37:54,743 Found index url https://www.piwheels.org/simple
2022-01-18T12:37:55,006   Skipping link: No binaries permitted for maicos: https://www.piwheels.org/simple/maicos/maicos-0.2-cp37-cp37m-linux_armv6l.whl#sha256=ad6062225d4cb2850018fc837b12b619b13b3e261b84e05764d2bee94dee1e8a (from https://www.piwheels.org/simple/maicos/) (requires-python:>=3.6)
2022-01-18T12:37:55,007   Skipping link: No binaries permitted for maicos: https://www.piwheels.org/simple/maicos/maicos-0.2-cp37-cp37m-linux_armv7l.whl#sha256=ad6062225d4cb2850018fc837b12b619b13b3e261b84e05764d2bee94dee1e8a (from https://www.piwheels.org/simple/maicos/) (requires-python:>=3.6)
2022-01-18T12:37:55,007   Skipping link: No binaries permitted for maicos: https://www.piwheels.org/simple/maicos/maicos-0.2-cp39-cp39-linux_armv6l.whl#sha256=a647e916f1060eeaac98c0e38441c146d0468da4d4ea77f8dcf35de5e9b7dae4 (from https://www.piwheels.org/simple/maicos/) (requires-python:>=3.6)
2022-01-18T12:37:55,008   Skipping link: No binaries permitted for maicos: https://www.piwheels.org/simple/maicos/maicos-0.2-cp39-cp39-linux_armv7l.whl#sha256=a647e916f1060eeaac98c0e38441c146d0468da4d4ea77f8dcf35de5e9b7dae4 (from https://www.piwheels.org/simple/maicos/) (requires-python:>=3.6)
2022-01-18T12:37:55,008   Skipping link: No binaries permitted for maicos: https://www.piwheels.org/simple/maicos/maicos-0.3-cp37-cp37m-linux_armv6l.whl#sha256=9efc65d2e43f3dea6d588c9e2900f908a050fc1ad93d96396b461451231774d1 (from https://www.piwheels.org/simple/maicos/) (requires-python:>=3.6, <3.9)
2022-01-18T12:37:55,009   Skipping link: No binaries permitted for maicos: https://www.piwheels.org/simple/maicos/maicos-0.3-cp37-cp37m-linux_armv7l.whl#sha256=9efc65d2e43f3dea6d588c9e2900f908a050fc1ad93d96396b461451231774d1 (from https://www.piwheels.org/simple/maicos/) (requires-python:>=3.6, <3.9)
2022-01-18T12:37:55,009   Skipping link: No binaries permitted for maicos: https://www.piwheels.org/simple/maicos/maicos-0.4-cp37-cp37m-linux_armv6l.whl#sha256=cfcf026edec231c3bf81338f8da87c82c8aa03c39209c9683c1875f93faa6cf4 (from https://www.piwheels.org/simple/maicos/) (requires-python:>=3.6)
2022-01-18T12:37:55,010   Skipping link: No binaries permitted for maicos: https://www.piwheels.org/simple/maicos/maicos-0.4-cp37-cp37m-linux_armv7l.whl#sha256=cfcf026edec231c3bf81338f8da87c82c8aa03c39209c9683c1875f93faa6cf4 (from https://www.piwheels.org/simple/maicos/) (requires-python:>=3.6)
2022-01-18T12:37:55,010   Skipping link: No binaries permitted for maicos: https://www.piwheels.org/simple/maicos/maicos-0.4-cp39-cp39-linux_armv6l.whl#sha256=1c6bfa3822c0edd40dc155c115f565fd8af5ea0779e0593abb9d5b48816944d0 (from https://www.piwheels.org/simple/maicos/) (requires-python:>=3.6)
2022-01-18T12:37:55,011   Skipping link: No binaries permitted for maicos: https://www.piwheels.org/simple/maicos/maicos-0.4-cp39-cp39-linux_armv7l.whl#sha256=1c6bfa3822c0edd40dc155c115f565fd8af5ea0779e0593abb9d5b48816944d0 (from https://www.piwheels.org/simple/maicos/) (requires-python:>=3.6)
2022-01-18T12:37:55,011   Skipping link: No binaries permitted for maicos: https://www.piwheels.org/simple/maicos/maicos-0.4.1-cp37-cp37m-linux_armv6l.whl#sha256=8b7a549229724d0ecc9c03a06369bef63625d169d832ad5f855124a87e98f8da (from https://www.piwheels.org/simple/maicos/) (requires-python:>=3.6)
2022-01-18T12:37:55,012   Skipping link: No binaries permitted for maicos: https://www.piwheels.org/simple/maicos/maicos-0.4.1-cp37-cp37m-linux_armv7l.whl#sha256=8b7a549229724d0ecc9c03a06369bef63625d169d832ad5f855124a87e98f8da (from https://www.piwheels.org/simple/maicos/) (requires-python:>=3.6)
2022-01-18T12:37:55,013 Skipping link: not a file: https://www.piwheels.org/simple/maicos/
2022-01-18T12:37:55,013 Skipping link: not a file: https://pypi.org/simple/maicos/
2022-01-18T12:37:55,054 Given no hashes to check 1 links for project 'maicos': discarding no candidates
2022-01-18T12:37:55,092 Collecting maicos==0.4.1
2022-01-18T12:37:55,095   Created temporary directory: /tmp/pip-unpack-iykcgcy4
2022-01-18T12:37:55,186   Downloading maicos-0.4.1.tar.gz (175 kB)
2022-01-18T12:37:55,484   Added maicos==0.4.1 from https://files.pythonhosted.org/packages/7b/b4/5cbb6d2d74c51604053b656e8787528e3019cd8f7b3ce04848efbc90f893/maicos-0.4.1.tar.gz#sha256=983cc39a0a541dc6a906d18658ca6d2650c60e56b731f93291dbaa3a078807dc to build tracker '/tmp/pip-req-tracker-xbfk43gx'
2022-01-18T12:37:55,486   Running setup.py (path:/tmp/pip-wheel-xi8jhi2r/maicos_9c8aad4a0bdc4bd59ed7d8c1f4846dad/setup.py) egg_info for package maicos
2022-01-18T12:37:55,487   Created temporary directory: /tmp/pip-pip-egg-info-8wuce9ea
2022-01-18T12:37:55,488   Preparing metadata (setup.py): started
2022-01-18T12:37:55,489   Running command python setup.py egg_info
2022-01-18T12:37:58,955   Attempting to autodetect OpenMP support... Compiler supports OpenMP
2022-01-18T12:37:58,957   running egg_info
2022-01-18T12:37:58,959   creating /tmp/pip-pip-egg-info-8wuce9ea/maicos.egg-info
2022-01-18T12:37:58,976   writing manifest file '/tmp/pip-pip-egg-info-8wuce9ea/maicos.egg-info/SOURCES.txt'
2022-01-18T12:37:59,022   writing manifest file '/tmp/pip-pip-egg-info-8wuce9ea/maicos.egg-info/SOURCES.txt'
2022-01-18T12:37:59,218   Preparing metadata (setup.py): finished with status 'done'
2022-01-18T12:37:59,227   Source in /tmp/pip-wheel-xi8jhi2r/maicos_9c8aad4a0bdc4bd59ed7d8c1f4846dad has version 0.4.1, which satisfies requirement maicos==0.4.1 from https://files.pythonhosted.org/packages/7b/b4/5cbb6d2d74c51604053b656e8787528e3019cd8f7b3ce04848efbc90f893/maicos-0.4.1.tar.gz#sha256=983cc39a0a541dc6a906d18658ca6d2650c60e56b731f93291dbaa3a078807dc
2022-01-18T12:37:59,229   Removed maicos==0.4.1 from https://files.pythonhosted.org/packages/7b/b4/5cbb6d2d74c51604053b656e8787528e3019cd8f7b3ce04848efbc90f893/maicos-0.4.1.tar.gz#sha256=983cc39a0a541dc6a906d18658ca6d2650c60e56b731f93291dbaa3a078807dc from build tracker '/tmp/pip-req-tracker-xbfk43gx'
2022-01-18T12:37:59,244 Created temporary directory: /tmp/pip-unpack-mdgfeurq
2022-01-18T12:37:59,245 Building wheels for collected packages: maicos
2022-01-18T12:37:59,253   Created temporary directory: /tmp/pip-wheel-t6niss0a
2022-01-18T12:37:59,254   Building wheel for maicos (setup.py): started
2022-01-18T12:37:59,255   Destination directory: /tmp/pip-wheel-t6niss0a
2022-01-18T12:37:59,255   Running command /usr/bin/python3 -u -c 'import io, os, sys, setuptools, tokenize; sys.argv[0] = '"'"'/tmp/pip-wheel-xi8jhi2r/maicos_9c8aad4a0bdc4bd59ed7d8c1f4846dad/setup.py'"'"'; __file__='"'"'/tmp/pip-wheel-xi8jhi2r/maicos_9c8aad4a0bdc4bd59ed7d8c1f4846dad/setup.py'"'"';f = getattr(tokenize, '"'"'open'"'"', open)(__file__) if os.path.exists(__file__) else io.StringIO('"'"'from setuptools import setup; setup()'"'"');code = f.read().replace('"'"'\r\n'"'"', '"'"'\n'"'"');f.close();exec(compile(code, __file__, '"'"'exec'"'"'))' bdist_wheel -d /tmp/pip-wheel-t6niss0a
2022-01-18T12:38:01,560   Attempting to autodetect OpenMP support... Compiler supports OpenMP
2022-01-18T12:38:02,487   running bdist_wheel
2022-01-18T12:38:02,496   running build
2022-01-18T12:38:02,497   running build_py
2022-01-18T12:38:02,505   creating build
2022-01-18T12:38:02,505   creating build/lib.linux-armv7l-3.9
2022-01-18T12:38:02,506   creating build/lib.linux-armv7l-3.9/maicos
2022-01-18T12:38:02,508   copying maicos/tables.py -> build/lib.linux-armv7l-3.9/maicos
2022-01-18T12:38:02,511   copying maicos/utils.py -> build/lib.linux-armv7l-3.9/maicos
2022-01-18T12:38:02,515   copying maicos/__main__.py -> build/lib.linux-armv7l-3.9/maicos
2022-01-18T12:38:02,520   copying maicos/decorators.py -> build/lib.linux-armv7l-3.9/maicos
2022-01-18T12:38:02,524   copying maicos/__init__.py -> build/lib.linux-armv7l-3.9/maicos
2022-01-18T12:38:02,527   copying maicos/arg_completion.py -> build/lib.linux-armv7l-3.9/maicos
2022-01-18T12:38:02,533   creating build/lib.linux-armv7l-3.9/maicos/modules
2022-01-18T12:38:02,534   copying maicos/modules/density.py -> build/lib.linux-armv7l-3.9/maicos/modules
2022-01-18T12:38:02,540   copying maicos/modules/base.py -> build/lib.linux-armv7l-3.9/maicos/modules
2022-01-18T12:38:02,544   copying maicos/modules/transport.py -> build/lib.linux-armv7l-3.9/maicos/modules
2022-01-18T12:38:02,548   copying maicos/modules/structure.py -> build/lib.linux-armv7l-3.9/maicos/modules
2022-01-18T12:38:02,554   copying maicos/modules/timeseries.py -> build/lib.linux-armv7l-3.9/maicos/modules
2022-01-18T12:38:02,558   copying maicos/modules/__init__.py -> build/lib.linux-armv7l-3.9/maicos/modules
2022-01-18T12:38:02,561   copying maicos/modules/epsilon.py -> build/lib.linux-armv7l-3.9/maicos/modules
2022-01-18T12:38:02,567   running egg_info
2022-01-18T12:38:02,648   writing manifest file 'maicos.egg-info/SOURCES.txt'
2022-01-18T12:38:02,653   creating build/lib.linux-armv7l-3.9/maicos/lib
2022-01-18T12:38:02,654   copying maicos/lib/sfactor.c -> build/lib.linux-armv7l-3.9/maicos/lib
2022-01-18T12:38:02,701   copying maicos/lib/sfactor.pyx -> build/lib.linux-armv7l-3.9/maicos/lib
2022-01-18T12:38:02,705   creating build/lib.linux-armv7l-3.9/maicos/share
2022-01-18T12:38:02,707   copying maicos/share/atomtypes.dat -> build/lib.linux-armv7l-3.9/maicos/share
2022-01-18T12:38:02,711   copying maicos/share/maicos-completion.bash -> build/lib.linux-armv7l-3.9/maicos/share
2022-01-18T12:38:02,715   copying maicos/share/sfactor.dat -> build/lib.linux-armv7l-3.9/maicos/share
2022-01-18T12:38:02,722   running build_ext
2022-01-18T12:38:02,725   creating build/temp.linux-armv7l-3.9
2022-01-18T12:38:02,725   creating build/temp.linux-armv7l-3.9/maicos
2022-01-18T12:38:02,726   creating build/temp.linux-armv7l-3.9/maicos/lib
2022-01-18T12:38:02,728   arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -ffile-prefix-map=/python3.9-3.9.2=. -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -fPIC -I/usr/local/lib/python3.9/dist-packages/numpy/core/include -I/usr/include/python3.9 -c maicos/lib/sfactor.c -o build/temp.linux-armv7l-3.9/maicos/lib/sfactor.o -std=c99 -ffast-math -O3 -funroll-loops -fopenmp
2022-01-18T12:38:03,513   In file included from /usr/local/lib/python3.9/dist-packages/numpy/core/include/numpy/ndarraytypes.h:1960,
2022-01-18T12:38:03,513                    from /usr/local/lib/python3.9/dist-packages/numpy/core/include/numpy/ndarrayobject.h:12,
2022-01-18T12:38:03,514                    from /usr/local/lib/python3.9/dist-packages/numpy/core/include/numpy/arrayobject.h:5,
2022-01-18T12:38:03,514                    from maicos/lib/sfactor.c:717:
2022-01-18T12:38:03,514   /usr/local/lib/python3.9/dist-packages/numpy/core/include/numpy/npy_1_7_deprecated_api.h:17:2: warning: #warning "Using deprecated NumPy API, disable it with " "#define NPY_NO_DEPRECATED_API NPY_1_7_API_VERSION" [-Wcpp]
2022-01-18T12:38:03,515      17 | #warning "Using deprecated NumPy API, disable it with " \
2022-01-18T12:38:03,515         |  ^~~~~~~
2022-01-18T12:38:40,774   maicos/lib/sfactor.c: In function ‘__pyx_pw_6maicos_3lib_7sfactor_1compute_structure_factor’:
2022-01-18T12:38:40,778   maicos/lib/sfactor.c:2928:25: warning: ‘__pyx_v_sin’ may be used uninitialized in this function [-Wmaybe-uninitialized]
2022-01-18T12:38:40,778    2928 |                 #pragma omp parallel reduction(+:__pyx_v_cos) reduction(+:__pyx_v_sin) private(__pyx_t_10, __pyx_t_15, __pyx_t_16, __pyx_t_17, __pyx_t_18, __pyx_t_19, __pyx_t_20, __pyx_t_21, __pyx_t_22, __pyx_t_23, __pyx_t_24, __pyx_t_25, __pyx_t_26, __pyx_t_27, __pyx_t_28, __pyx_t_29, __pyx_t_8)
2022-01-18T12:38:40,779         |                         ^~~
2022-01-18T12:38:40,781   maicos/lib/sfactor.c:2627:10: note: ‘__pyx_v_sin’ was declared here
2022-01-18T12:38:40,781    2627 |   double __pyx_v_sin;
2022-01-18T12:38:40,781         |          ^~~~~~~~~~~
2022-01-18T12:38:40,784   maicos/lib/sfactor.c:2928:25: warning: ‘__pyx_v_cos’ may be used uninitialized in this function [-Wmaybe-uninitialized]
2022-01-18T12:38:40,784    2928 |                 #pragma omp parallel reduction(+:__pyx_v_cos) reduction(+:__pyx_v_sin) private(__pyx_t_10, __pyx_t_15, __pyx_t_16, __pyx_t_17, __pyx_t_18, __pyx_t_19, __pyx_t_20, __pyx_t_21, __pyx_t_22, __pyx_t_23, __pyx_t_24, __pyx_t_25, __pyx_t_26, __pyx_t_27, __pyx_t_28, __pyx_t_29, __pyx_t_8)
2022-01-18T12:38:40,784         |                         ^~~
2022-01-18T12:38:40,787   maicos/lib/sfactor.c:2628:10: note: ‘__pyx_v_cos’ was declared here
2022-01-18T12:38:40,787    2628 |   double __pyx_v_cos;
2022-01-18T12:38:40,787         |          ^~~~~~~~~~~
2022-01-18T12:38:49,351   arm-linux-gnueabihf-gcc -pthread -shared -Wl,-O1 -Wl,-Bsymbolic-functions -Wl,-z,relro -g -fwrapv -O2 build/temp.linux-armv7l-3.9/maicos/lib/sfactor.o -L/usr/lib -lm -o build/lib.linux-armv7l-3.9/maicos/lib/sfactor.cpython-39-arm-linux-gnueabihf.so -fopenmp
2022-01-18T12:38:49,782   /usr/local/lib/python3.9/dist-packages/setuptools/command/install.py:34: SetuptoolsDeprecationWarning: setup.py install is deprecated. Use build and pip and other standards-based tools.
2022-01-18T12:38:49,783     warnings.warn(
2022-01-18T12:38:49,787   running install
2022-01-18T12:38:49,852   running install_lib
2022-01-18T12:38:49,858   creating build/bdist.linux-armv7l
2022-01-18T12:38:49,859   creating build/bdist.linux-armv7l/wheel
2022-01-18T12:38:49,862   creating build/bdist.linux-armv7l/wheel/maicos
2022-01-18T12:38:49,865   creating build/bdist.linux-armv7l/wheel/maicos/lib
2022-01-18T12:38:49,980   creating build/bdist.linux-armv7l/wheel/maicos/modules
2022-01-18T12:38:50,033   creating build/bdist.linux-armv7l/wheel/maicos/share
2022-01-18T12:38:50,048   running install_egg_info
2022-01-18T12:38:50,065   Copying maicos.egg-info to build/bdist.linux-armv7l/wheel/maicos-0.4.1-py3.9.egg-info
2022-01-18T12:38:50,093   running install_scripts
2022-01-18T12:38:51,488   Building wheel for maicos (setup.py): finished with status 'done'
2022-01-18T12:38:51,511   Created wheel for maicos: filename=maicos-0.4.1-cp39-cp39-linux_armv7l.whl size=594077 sha256=0e722e777e938a994f70a9ed37b542bc7c2f982445381fb850a40776d253a655
2022-01-18T12:38:51,512   Stored in directory: /tmp/pip-ephem-wheel-cache-d0wsowv4/wheels/78/78/03/317c1fad5a293aec88fc3ff2de47a7009e9964a45add08045f
2022-01-18T12:38:51,542 Successfully built maicos
2022-01-18T12:38:51,601 Removed build tracker: '/tmp/pip-req-tracker-xbfk43gx'