2022-01-18T23:30:08,150 Created temporary directory: /tmp/pip-ephem-wheel-cache-v4zfw48a 2022-01-18T23:30:08,156 Created temporary directory: /tmp/pip-req-tracker-p7qltltp 2022-01-18T23:30:08,157 Initialized build tracking at /tmp/pip-req-tracker-p7qltltp 2022-01-18T23:30:08,158 Created build tracker: /tmp/pip-req-tracker-p7qltltp 2022-01-18T23:30:08,158 Entered build tracker: /tmp/pip-req-tracker-p7qltltp 2022-01-18T23:30:08,159 Created temporary directory: /tmp/pip-wheel-w7k4d5vs 2022-01-18T23:30:08,225 Looking in indexes: https://pypi.org/simple, https://www.piwheels.org/simple 2022-01-18T23:30:08,230 2 location(s) to search for versions of pycows: 2022-01-18T23:30:08,230 * https://pypi.org/simple/pycows/ 2022-01-18T23:30:08,230 * https://www.piwheels.org/simple/pycows/ 2022-01-18T23:30:08,231 Fetching project page and analyzing links: https://pypi.org/simple/pycows/ 2022-01-18T23:30:08,232 Getting page https://pypi.org/simple/pycows/ 2022-01-18T23:30:08,236 Found index url https://pypi.org/simple 2022-01-18T23:30:08,512 Skipping link: No binaries permitted for pycows: https://files.pythonhosted.org/packages/7c/6c/ac66b06d11e97ecc5b08b35da5cb40877c3d08bc0f1654d7fb175a26c229/pycows-0.0.0-cp39-cp39-macosx_11_0_x86_64.whl#sha256=6cbffe6e5d4888b30ff7a338fae36b8ea8c7d9912885c7b854da69e8fd71cea1 (from https://pypi.org/simple/pycows/) (requires-python:>=3.6) 2022-01-18T23:30:08,513 Found link https://files.pythonhosted.org/packages/ad/f6/2b42f86a055e03e6c69ba982cc9b87448098cf20349165fba5387531e333/pycows-0.0.0.tar.gz#sha256=cfc9fb370b9338a6b215f1b5d3a3fc81150e9bf3b6a9e17977c47795b6c8ff99 (from https://pypi.org/simple/pycows/) (requires-python:>=3.6), version: 0.0.0 2022-01-18T23:30:08,514 Skipping link: No binaries permitted for pycows: https://files.pythonhosted.org/packages/6f/36/ee69873e1417d895f057a1ef8b6b0b2006032e0273af9877042414ad5f6d/pycows-0.0.1-cp39-cp39-macosx_11_0_x86_64.whl#sha256=359a92c4287850c3802d2712a32e53be692f924e3fe0921c5f191ee0d2c86d41 (from https://pypi.org/simple/pycows/) (requires-python:>=3.6) 2022-01-18T23:30:08,516 Found link https://files.pythonhosted.org/packages/35/53/82f2898423d0b04b7c91dedfbe824e2fb7e1e8ac28373d0b8c522bd7de45/pycows-0.0.1.tar.gz#sha256=3b264b5b196dfd4d00059f70b4ef658db074b1aac4f78f40029d79ca983f89f4 (from https://pypi.org/simple/pycows/) (requires-python:>=3.6), version: 0.0.1 2022-01-18T23:30:08,517 Fetching project page and analyzing links: https://www.piwheels.org/simple/pycows/ 2022-01-18T23:30:08,517 Getting page https://www.piwheels.org/simple/pycows/ 2022-01-18T23:30:08,519 Found index url https://www.piwheels.org/simple 2022-01-18T23:30:08,769 Skipping link: No binaries permitted for pycows: https://www.piwheels.org/simple/pycows/pycows-0.0.0-cp37-cp37m-linux_armv6l.whl#sha256=28c94dc60be8431c98a04297ef7bdd67092082d907c99b5cecbe63aed341b7e0 (from https://www.piwheels.org/simple/pycows/) (requires-python:>=3.6) 2022-01-18T23:30:08,770 Skipping link: No binaries permitted for pycows: https://www.piwheels.org/simple/pycows/pycows-0.0.0-cp37-cp37m-linux_armv7l.whl#sha256=28c94dc60be8431c98a04297ef7bdd67092082d907c99b5cecbe63aed341b7e0 (from https://www.piwheels.org/simple/pycows/) (requires-python:>=3.6) 2022-01-18T23:30:08,770 Skipping link: No binaries permitted for pycows: https://www.piwheels.org/simple/pycows/pycows-0.0.0-cp39-cp39-linux_armv6l.whl#sha256=09e3ca5c67936b04865316305b54078091bb80be569194842bcf7d7ca05a7d00 (from https://www.piwheels.org/simple/pycows/) (requires-python:>=3.6) 2022-01-18T23:30:08,771 Skipping link: No binaries permitted for pycows: https://www.piwheels.org/simple/pycows/pycows-0.0.0-cp39-cp39-linux_armv7l.whl#sha256=09e3ca5c67936b04865316305b54078091bb80be569194842bcf7d7ca05a7d00 (from https://www.piwheels.org/simple/pycows/) (requires-python:>=3.6) 2022-01-18T23:30:08,771 Skipping link: No binaries permitted for pycows: https://www.piwheels.org/simple/pycows/pycows-0.0.1-cp37-cp37m-linux_armv6l.whl#sha256=ae4b2ca67afaf864a810d4f705e0c3143b4f8fae957efb235b4498fd4bd38f37 (from https://www.piwheels.org/simple/pycows/) (requires-python:>=3.6) 2022-01-18T23:30:08,772 Skipping link: No binaries permitted for pycows: https://www.piwheels.org/simple/pycows/pycows-0.0.1-cp37-cp37m-linux_armv7l.whl#sha256=ae4b2ca67afaf864a810d4f705e0c3143b4f8fae957efb235b4498fd4bd38f37 (from https://www.piwheels.org/simple/pycows/) (requires-python:>=3.6) 2022-01-18T23:30:08,772 Skipping link: No binaries permitted for pycows: https://www.piwheels.org/simple/pycows/pycows-0.0.1-cp39-cp39-linux_armv6l.whl#sha256=7863efbcc4189d9dc2164beef267eddafeb22b90db05baf0f64a731d4ebf0a2e (from https://www.piwheels.org/simple/pycows/) (requires-python:>=3.6) 2022-01-18T23:30:08,773 Skipping link: No binaries permitted for pycows: https://www.piwheels.org/simple/pycows/pycows-0.0.1-cp39-cp39-linux_armv7l.whl#sha256=7863efbcc4189d9dc2164beef267eddafeb22b90db05baf0f64a731d4ebf0a2e (from https://www.piwheels.org/simple/pycows/) (requires-python:>=3.6) 2022-01-18T23:30:08,773 Skipping link: not a file: https://www.piwheels.org/simple/pycows/ 2022-01-18T23:30:08,774 Skipping link: not a file: https://pypi.org/simple/pycows/ 2022-01-18T23:30:08,805 Given no hashes to check 1 links for project 'pycows': discarding no candidates 2022-01-18T23:30:08,833 Collecting pycows==0.0.0 2022-01-18T23:30:08,836 Created temporary directory: /tmp/pip-unpack-vcgw464v 2022-01-18T23:30:08,930 Downloading pycows-0.0.0.tar.gz (387 kB) 2022-01-18T23:30:09,752 Added pycows==0.0.0 from https://files.pythonhosted.org/packages/ad/f6/2b42f86a055e03e6c69ba982cc9b87448098cf20349165fba5387531e333/pycows-0.0.0.tar.gz#sha256=cfc9fb370b9338a6b215f1b5d3a3fc81150e9bf3b6a9e17977c47795b6c8ff99 to build tracker '/tmp/pip-req-tracker-p7qltltp' 2022-01-18T23:30:09,754 Running setup.py (path:/tmp/pip-wheel-w7k4d5vs/pycows_f991dd1f7d224f44bed1865efb99bc47/setup.py) egg_info for package pycows 2022-01-18T23:30:09,755 Created temporary directory: /tmp/pip-pip-egg-info-5pd77e3k 2022-01-18T23:30:09,756 Preparing metadata (setup.py): started 2022-01-18T23:30:09,756 Running command python setup.py egg_info 2022-01-18T23:30:12,761 running egg_info 2022-01-18T23:30:12,768 creating /tmp/pip-pip-egg-info-5pd77e3k/pycows.egg-info 2022-01-18T23:30:12,782 writing manifest file '/tmp/pip-pip-egg-info-5pd77e3k/pycows.egg-info/SOURCES.txt' 2022-01-18T23:30:12,826 warning: no previously-included files matching '*.py[cod]' found anywhere in distribution 2022-01-18T23:30:12,827 warning: no previously-included files matching '__pycache__/*' found anywhere in distribution 2022-01-18T23:30:12,828 warning: no previously-included files matching '*.so' found anywhere in distribution 2022-01-18T23:30:12,830 warning: no previously-included files matching '*.dylib' found anywhere in distribution 2022-01-18T23:30:12,840 writing manifest file '/tmp/pip-pip-egg-info-5pd77e3k/pycows.egg-info/SOURCES.txt' 2022-01-18T23:30:13,038 Preparing metadata (setup.py): finished with status 'done' 2022-01-18T23:30:13,046 Source in /tmp/pip-wheel-w7k4d5vs/pycows_f991dd1f7d224f44bed1865efb99bc47 has version 0.0.0, which satisfies requirement pycows==0.0.0 from https://files.pythonhosted.org/packages/ad/f6/2b42f86a055e03e6c69ba982cc9b87448098cf20349165fba5387531e333/pycows-0.0.0.tar.gz#sha256=cfc9fb370b9338a6b215f1b5d3a3fc81150e9bf3b6a9e17977c47795b6c8ff99 2022-01-18T23:30:13,048 Removed pycows==0.0.0 from https://files.pythonhosted.org/packages/ad/f6/2b42f86a055e03e6c69ba982cc9b87448098cf20349165fba5387531e333/pycows-0.0.0.tar.gz#sha256=cfc9fb370b9338a6b215f1b5d3a3fc81150e9bf3b6a9e17977c47795b6c8ff99 from build tracker '/tmp/pip-req-tracker-p7qltltp' 2022-01-18T23:30:13,061 Created temporary directory: /tmp/pip-unpack-5hovg4xt 2022-01-18T23:30:13,063 Building wheels for collected packages: pycows 2022-01-18T23:30:13,070 Created temporary directory: /tmp/pip-wheel-jw27dit7 2022-01-18T23:30:13,071 Building wheel for pycows (setup.py): started 2022-01-18T23:30:13,071 Destination directory: /tmp/pip-wheel-jw27dit7 2022-01-18T23:30:13,072 Running command /usr/bin/python3 -u -c 'import io, os, sys, setuptools, tokenize; sys.argv[0] = '"'"'/tmp/pip-wheel-w7k4d5vs/pycows_f991dd1f7d224f44bed1865efb99bc47/setup.py'"'"'; __file__='"'"'/tmp/pip-wheel-w7k4d5vs/pycows_f991dd1f7d224f44bed1865efb99bc47/setup.py'"'"';f = getattr(tokenize, '"'"'open'"'"', open)(__file__) if os.path.exists(__file__) else io.StringIO('"'"'from setuptools import setup; setup()'"'"');code = f.read().replace('"'"'\r\n'"'"', '"'"'\n'"'"');f.close();exec(compile(code, __file__, '"'"'exec'"'"'))' bdist_wheel -d /tmp/pip-wheel-jw27dit7 2022-01-18T23:30:16,035 running bdist_wheel 2022-01-18T23:30:16,043 running build 2022-01-18T23:30:16,044 running build_py 2022-01-18T23:30:16,051 creating build 2022-01-18T23:30:16,052 creating build/lib.linux-armv7l-3.7 2022-01-18T23:30:16,053 creating build/lib.linux-armv7l-3.7/cows 2022-01-18T23:30:16,055 copying src/cows/filament.py -> build/lib.linux-armv7l-3.7/cows 2022-01-18T23:30:16,058 copying src/cows/__init__.py -> build/lib.linux-armv7l-3.7/cows 2022-01-18T23:30:16,062 copying src/cows/dtype.py -> build/lib.linux-armv7l-3.7/cows 2022-01-18T23:30:16,067 copying src/cows/catalogue.py -> build/lib.linux-armv7l-3.7/cows 2022-01-18T23:30:16,070 copying src/cows/arraycrop.py -> build/lib.linux-armv7l-3.7/cows 2022-01-18T23:30:16,073 copying src/cows/skeletonize.py -> build/lib.linux-armv7l-3.7/cows 2022-01-18T23:30:16,076 running egg_info 2022-01-18T23:30:16,144 warning: no previously-included files matching '*.py[cod]' found anywhere in distribution 2022-01-18T23:30:16,146 warning: no previously-included files matching '__pycache__/*' found anywhere in distribution 2022-01-18T23:30:16,147 warning: no previously-included files matching '*.so' found anywhere in distribution 2022-01-18T23:30:16,149 warning: no previously-included files matching '*.dylib' found anywhere in distribution 2022-01-18T23:30:16,161 writing manifest file 'src/pycows.egg-info/SOURCES.txt' 2022-01-18T23:30:16,170 copying src/cows/.DS_Store -> build/lib.linux-armv7l-3.7/cows 2022-01-18T23:30:16,174 copying src/cows/_filament.c -> build/lib.linux-armv7l-3.7/cows 2022-01-18T23:30:16,221 copying src/cows/_filament.pyx -> build/lib.linux-armv7l-3.7/cows 2022-01-18T23:30:16,226 copying src/cows/_skeletonize_3d_cy.cpp -> build/lib.linux-armv7l-3.7/cows 2022-01-18T23:30:16,288 copying src/cows/_skeletonize_3d_cy.pyx -> build/lib.linux-armv7l-3.7/cows 2022-01-18T23:30:16,294 creating build/lib.linux-armv7l-3.7/cows/cows.egg-info 2022-01-18T23:30:16,296 copying src/cows/cows.egg-info/PKG-INFO -> build/lib.linux-armv7l-3.7/cows/cows.egg-info 2022-01-18T23:30:16,301 copying src/cows/cows.egg-info/SOURCES.txt -> build/lib.linux-armv7l-3.7/cows/cows.egg-info 2022-01-18T23:30:16,305 copying src/cows/cows.egg-info/dependency_links.txt -> build/lib.linux-armv7l-3.7/cows/cows.egg-info 2022-01-18T23:30:16,309 copying src/cows/cows.egg-info/not-zip-safe -> build/lib.linux-armv7l-3.7/cows/cows.egg-info 2022-01-18T23:30:16,314 copying src/cows/cows.egg-info/top_level.txt -> build/lib.linux-armv7l-3.7/cows/cows.egg-info 2022-01-18T23:30:16,320 running build_ext 2022-01-18T23:30:16,332 creating build/temp.linux-armv7l-3.7 2022-01-18T23:30:16,333 creating build/temp.linux-armv7l-3.7/src 2022-01-18T23:30:16,335 creating build/temp.linux-armv7l-3.7/src/cows 2022-01-18T23:30:16,337 arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -fstack-protector-strong -Wformat -Werror=format-security -g -flto -fuse-linker-plugin -ffat-lto-objects -fPIC -I/usr/include/python3.7m -c src/cows/_filament.c -o build/temp.linux-armv7l-3.7/src/cows/_filament.o 2022-01-18T23:30:48,039 arm-linux-gnueabihf-gcc -pthread -shared -Wl,-O1 -Wl,-Bsymbolic-functions -Wl,-z,relro build/temp.linux-armv7l-3.7/src/cows/_filament.o -L/usr/lib -o build/lib.linux-armv7l-3.7/cows/_filament.cpython-37m-arm-linux-gnueabihf.so 2022-01-18T23:31:10,930 arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -fstack-protector-strong -Wformat -Werror=format-security -g -flto -fuse-linker-plugin -ffat-lto-objects -fPIC -I/usr/local/lib/python3.7/dist-packages/numpy/core/include -I/usr/include/python3.7m -c src/cows/_skeletonize_3d_cy.cpp -o build/temp.linux-armv7l-3.7/src/cows/_skeletonize_3d_cy.o 2022-01-18T23:31:11,688 In file included from /usr/local/lib/python3.7/dist-packages/numpy/core/include/numpy/ndarraytypes.h:1969, 2022-01-18T23:31:11,688 from /usr/local/lib/python3.7/dist-packages/numpy/core/include/numpy/ndarrayobject.h:12, 2022-01-18T23:31:11,688 from /usr/local/lib/python3.7/dist-packages/numpy/core/include/numpy/arrayobject.h:4, 2022-01-18T23:31:11,689 from src/cows/_skeletonize_3d_cy.cpp:654: 2022-01-18T23:31:11,689 /usr/local/lib/python3.7/dist-packages/numpy/core/include/numpy/npy_1_7_deprecated_api.h:17:2: warning: #warning "Using deprecated NumPy API, disable it with " "#define NPY_NO_DEPRECATED_API NPY_1_7_API_VERSION" [-Wcpp] 2022-01-18T23:31:11,689 #warning "Using deprecated NumPy API, disable it with " \ 2022-01-18T23:31:11,690 ^~~~~~~ 2022-01-18T23:31:41,515 src/cows/_skeletonize_3d_cy.cpp: In function ‘__pyx_pw_4cows_18_skeletonize_3d_cy_1_compute_thin_image(_object*, _object*, _object*)’: 2022-01-18T23:31:41,516 src/cows/_skeletonize_3d_cy.cpp:2990:69: warning: ‘__pyx_v_kmax’ may be used uninitialized in this function [-Wmaybe-uninitialized] 2022-01-18T23:31:41,516 if (unlikely(__pyx_memoryview_slice_memviewslice( 2022-01-18T23:31:41,517 ^ 2022-01-18T23:31:41,517 src/cows/_skeletonize_3d_cy.cpp:2759:12: note: ‘__pyx_v_kmax’ was declared here 2022-01-18T23:31:41,517 npy_intp __pyx_v_kmax; 2022-01-18T23:31:41,518 ^~~~~~~~~~~~ 2022-01-18T23:31:41,519 src/cows/_skeletonize_3d_cy.cpp:3007:49: warning: ‘__pyx_v_jmax’ may be used uninitialized in this function [-Wmaybe-uninitialized] 2022-01-18T23:31:41,519 if (unlikely(__pyx_memoryview_slice_memviewslice( 2022-01-18T23:31:41,519 ^ 2022-01-18T23:31:41,520 src/cows/_skeletonize_3d_cy.cpp:2758:12: note: ‘__pyx_v_jmax’ was declared here 2022-01-18T23:31:41,520 npy_intp __pyx_v_jmax; 2022-01-18T23:31:41,520 ^~~~~~~~~~~~ 2022-01-18T23:31:41,521 src/cows/_skeletonize_3d_cy.cpp:3024:49: warning: ‘__pyx_v_imax’ may be used uninitialized in this function [-Wmaybe-uninitialized] 2022-01-18T23:31:41,521 if (unlikely(__pyx_memoryview_slice_memviewslice( 2022-01-18T23:31:41,522 ^ 2022-01-18T23:31:41,522 src/cows/_skeletonize_3d_cy.cpp:2757:12: note: ‘__pyx_v_imax’ was declared here 2022-01-18T23:31:41,522 npy_intp __pyx_v_imax; 2022-01-18T23:31:41,523 ^~~~~~~~~~~~ 2022-01-18T23:31:46,750 arm-linux-gnueabihf-g++ -pthread -shared -Wl,-O1 -Wl,-Bsymbolic-functions -Wl,-z,relro build/temp.linux-armv7l-3.7/src/cows/_skeletonize_3d_cy.o -L/usr/lib -o build/lib.linux-armv7l-3.7/cows/_skeletonize_3d_cy.cpython-37m-arm-linux-gnueabihf.so 2022-01-18T23:32:10,404 /usr/local/lib/python3.7/dist-packages/setuptools/command/install.py:37: SetuptoolsDeprecationWarning: setup.py install is deprecated. Use build and pip and other standards-based tools. 2022-01-18T23:32:10,405 setuptools.SetuptoolsDeprecationWarning, 2022-01-18T23:32:10,409 running install 2022-01-18T23:32:10,471 running install_lib 2022-01-18T23:32:10,478 creating build/bdist.linux-armv7l 2022-01-18T23:32:10,479 creating build/bdist.linux-armv7l/wheel 2022-01-18T23:32:10,482 creating build/bdist.linux-armv7l/wheel/cows 2022-01-18T23:32:10,664 creating build/bdist.linux-armv7l/wheel/cows/cows.egg-info 2022-01-18T23:32:10,693 running install_egg_info 2022-01-18T23:32:10,712 Copying src/pycows.egg-info to build/bdist.linux-armv7l/wheel/pycows-0.0.0-py3.7.egg-info 2022-01-18T23:32:10,732 running install_scripts 2022-01-18T23:32:12,037 Building wheel for pycows (setup.py): finished with status 'done' 2022-01-18T23:32:12,059 Created wheel for pycows: filename=pycows-0.0.0-cp37-cp37m-linux_armv7l.whl size=532086 sha256=350bc06b6f6db22d442c482c80d1b1ffca2127c452947dcdaaed2bab0dba3c58 2022-01-18T23:32:12,059 Stored in directory: /tmp/pip-ephem-wheel-cache-v4zfw48a/wheels/32/d2/15/c779a8ff1ba8397df20aae8d23afd6b77d13f7960f52aa7dc9 2022-01-18T23:32:12,082 Successfully built pycows 2022-01-18T23:32:12,129 Removed build tracker: '/tmp/pip-req-tracker-p7qltltp'