2022-01-19T04:29:00,643 Created temporary directory: /tmp/pip-ephem-wheel-cache-jnva3g1n
2022-01-19T04:29:00,648 Created temporary directory: /tmp/pip-req-tracker-vzzjna8y
2022-01-19T04:29:00,649 Initialized build tracking at /tmp/pip-req-tracker-vzzjna8y
2022-01-19T04:29:00,650 Created build tracker: /tmp/pip-req-tracker-vzzjna8y
2022-01-19T04:29:00,650 Entered build tracker: /tmp/pip-req-tracker-vzzjna8y
2022-01-19T04:29:00,651 Created temporary directory: /tmp/pip-wheel-zw8eeyog
2022-01-19T04:29:00,711 Looking in indexes: https://pypi.org/simple, https://www.piwheels.org/simple
2022-01-19T04:29:00,717 2 location(s) to search for versions of pycows:
2022-01-19T04:29:00,717 * https://pypi.org/simple/pycows/
2022-01-19T04:29:00,717 * https://www.piwheels.org/simple/pycows/
2022-01-19T04:29:00,718 Fetching project page and analyzing links: https://pypi.org/simple/pycows/
2022-01-19T04:29:00,719 Getting page https://pypi.org/simple/pycows/
2022-01-19T04:29:00,722 Found index url https://pypi.org/simple
2022-01-19T04:29:01,002   Skipping link: No binaries permitted for pycows: https://files.pythonhosted.org/packages/7c/6c/ac66b06d11e97ecc5b08b35da5cb40877c3d08bc0f1654d7fb175a26c229/pycows-0.0.0-cp39-cp39-macosx_11_0_x86_64.whl#sha256=6cbffe6e5d4888b30ff7a338fae36b8ea8c7d9912885c7b854da69e8fd71cea1 (from https://pypi.org/simple/pycows/) (requires-python:>=3.6)
2022-01-19T04:29:01,004   Found link https://files.pythonhosted.org/packages/ad/f6/2b42f86a055e03e6c69ba982cc9b87448098cf20349165fba5387531e333/pycows-0.0.0.tar.gz#sha256=cfc9fb370b9338a6b215f1b5d3a3fc81150e9bf3b6a9e17977c47795b6c8ff99 (from https://pypi.org/simple/pycows/) (requires-python:>=3.6), version: 0.0.0
2022-01-19T04:29:01,004   Skipping link: No binaries permitted for pycows: https://files.pythonhosted.org/packages/6f/36/ee69873e1417d895f057a1ef8b6b0b2006032e0273af9877042414ad5f6d/pycows-0.0.1-cp39-cp39-macosx_11_0_x86_64.whl#sha256=359a92c4287850c3802d2712a32e53be692f924e3fe0921c5f191ee0d2c86d41 (from https://pypi.org/simple/pycows/) (requires-python:>=3.6)
2022-01-19T04:29:01,006   Found link https://files.pythonhosted.org/packages/35/53/82f2898423d0b04b7c91dedfbe824e2fb7e1e8ac28373d0b8c522bd7de45/pycows-0.0.1.tar.gz#sha256=3b264b5b196dfd4d00059f70b4ef658db074b1aac4f78f40029d79ca983f89f4 (from https://pypi.org/simple/pycows/) (requires-python:>=3.6), version: 0.0.1
2022-01-19T04:29:01,006 Fetching project page and analyzing links: https://www.piwheels.org/simple/pycows/
2022-01-19T04:29:01,007 Getting page https://www.piwheels.org/simple/pycows/
2022-01-19T04:29:01,009 Found index url https://www.piwheels.org/simple
2022-01-19T04:29:01,229   Skipping link: No binaries permitted for pycows: https://www.piwheels.org/simple/pycows/pycows-0.0.0-cp37-cp37m-linux_armv6l.whl#sha256=350bc06b6f6db22d442c482c80d1b1ffca2127c452947dcdaaed2bab0dba3c58 (from https://www.piwheels.org/simple/pycows/) (requires-python:>=3.6)
2022-01-19T04:29:01,230   Skipping link: No binaries permitted for pycows: https://www.piwheels.org/simple/pycows/pycows-0.0.0-cp37-cp37m-linux_armv7l.whl#sha256=350bc06b6f6db22d442c482c80d1b1ffca2127c452947dcdaaed2bab0dba3c58 (from https://www.piwheels.org/simple/pycows/) (requires-python:>=3.6)
2022-01-19T04:29:01,230   Skipping link: No binaries permitted for pycows: https://www.piwheels.org/simple/pycows/pycows-0.0.0-cp39-cp39-linux_armv6l.whl#sha256=45f6593aa2be391e54066c05f9cab6d932ac7a720838d4843ad3ff313380f439 (from https://www.piwheels.org/simple/pycows/) (requires-python:>=3.6)
2022-01-19T04:29:01,231   Skipping link: No binaries permitted for pycows: https://www.piwheels.org/simple/pycows/pycows-0.0.0-cp39-cp39-linux_armv7l.whl#sha256=45f6593aa2be391e54066c05f9cab6d932ac7a720838d4843ad3ff313380f439 (from https://www.piwheels.org/simple/pycows/) (requires-python:>=3.6)
2022-01-19T04:29:01,231   Skipping link: No binaries permitted for pycows: https://www.piwheels.org/simple/pycows/pycows-0.0.1-cp37-cp37m-linux_armv6l.whl#sha256=f4d4b5ff372fd24ce42f0535a6b713bff8cefb4b8f1eba79848333ad3ae1b321 (from https://www.piwheels.org/simple/pycows/) (requires-python:>=3.6)
2022-01-19T04:29:01,231   Skipping link: No binaries permitted for pycows: https://www.piwheels.org/simple/pycows/pycows-0.0.1-cp37-cp37m-linux_armv7l.whl#sha256=f4d4b5ff372fd24ce42f0535a6b713bff8cefb4b8f1eba79848333ad3ae1b321 (from https://www.piwheels.org/simple/pycows/) (requires-python:>=3.6)
2022-01-19T04:29:01,232 Skipping link: not a file: https://www.piwheels.org/simple/pycows/
2022-01-19T04:29:01,233 Skipping link: not a file: https://pypi.org/simple/pycows/
2022-01-19T04:29:01,273 Given no hashes to check 1 links for project 'pycows': discarding no candidates
2022-01-19T04:29:01,311 Collecting pycows==0.0.1
2022-01-19T04:29:01,314   Created temporary directory: /tmp/pip-unpack-cc94s9sm
2022-01-19T04:29:01,406   Downloading pycows-0.0.1.tar.gz (407 kB)
2022-01-19T04:29:02,201   Added pycows==0.0.1 from https://files.pythonhosted.org/packages/35/53/82f2898423d0b04b7c91dedfbe824e2fb7e1e8ac28373d0b8c522bd7de45/pycows-0.0.1.tar.gz#sha256=3b264b5b196dfd4d00059f70b4ef658db074b1aac4f78f40029d79ca983f89f4 to build tracker '/tmp/pip-req-tracker-vzzjna8y'
2022-01-19T04:29:02,202   Running setup.py (path:/tmp/pip-wheel-zw8eeyog/pycows_8e93ef565739496e8d3f2780c18a9875/setup.py) egg_info for package pycows
2022-01-19T04:29:02,204   Created temporary directory: /tmp/pip-pip-egg-info-q04a5gn7
2022-01-19T04:29:02,204   Preparing metadata (setup.py): started
2022-01-19T04:29:02,205   Running command python setup.py egg_info
2022-01-19T04:29:05,017   running egg_info
2022-01-19T04:29:05,021   creating /tmp/pip-pip-egg-info-q04a5gn7/pycows.egg-info
2022-01-19T04:29:05,034   writing manifest file '/tmp/pip-pip-egg-info-q04a5gn7/pycows.egg-info/SOURCES.txt'
2022-01-19T04:29:05,077   warning: no previously-included files matching '*.py[cod]' found anywhere in distribution
2022-01-19T04:29:05,079   warning: no previously-included files matching '__pycache__/*' found anywhere in distribution
2022-01-19T04:29:05,080   warning: no previously-included files matching '*.so' found anywhere in distribution
2022-01-19T04:29:05,081   warning: no previously-included files matching '*.dylib' found anywhere in distribution
2022-01-19T04:29:05,091   writing manifest file '/tmp/pip-pip-egg-info-q04a5gn7/pycows.egg-info/SOURCES.txt'
2022-01-19T04:29:05,287   Preparing metadata (setup.py): finished with status 'done'
2022-01-19T04:29:05,295   Source in /tmp/pip-wheel-zw8eeyog/pycows_8e93ef565739496e8d3f2780c18a9875 has version 0.0.1, which satisfies requirement pycows==0.0.1 from https://files.pythonhosted.org/packages/35/53/82f2898423d0b04b7c91dedfbe824e2fb7e1e8ac28373d0b8c522bd7de45/pycows-0.0.1.tar.gz#sha256=3b264b5b196dfd4d00059f70b4ef658db074b1aac4f78f40029d79ca983f89f4
2022-01-19T04:29:05,297   Removed pycows==0.0.1 from https://files.pythonhosted.org/packages/35/53/82f2898423d0b04b7c91dedfbe824e2fb7e1e8ac28373d0b8c522bd7de45/pycows-0.0.1.tar.gz#sha256=3b264b5b196dfd4d00059f70b4ef658db074b1aac4f78f40029d79ca983f89f4 from build tracker '/tmp/pip-req-tracker-vzzjna8y'
2022-01-19T04:29:05,309 Created temporary directory: /tmp/pip-unpack-8cu9bedv
2022-01-19T04:29:05,310 Building wheels for collected packages: pycows
2022-01-19T04:29:05,318   Created temporary directory: /tmp/pip-wheel-042lztc8
2022-01-19T04:29:05,318   Building wheel for pycows (setup.py): started
2022-01-19T04:29:05,319   Destination directory: /tmp/pip-wheel-042lztc8
2022-01-19T04:29:05,320   Running command /usr/bin/python3 -u -c 'import io, os, sys, setuptools, tokenize; sys.argv[0] = '"'"'/tmp/pip-wheel-zw8eeyog/pycows_8e93ef565739496e8d3f2780c18a9875/setup.py'"'"'; __file__='"'"'/tmp/pip-wheel-zw8eeyog/pycows_8e93ef565739496e8d3f2780c18a9875/setup.py'"'"';f = getattr(tokenize, '"'"'open'"'"', open)(__file__) if os.path.exists(__file__) else io.StringIO('"'"'from setuptools import setup; setup()'"'"');code = f.read().replace('"'"'\r\n'"'"', '"'"'\n'"'"');f.close();exec(compile(code, __file__, '"'"'exec'"'"'))' bdist_wheel -d /tmp/pip-wheel-042lztc8
2022-01-19T04:29:08,327   running bdist_wheel
2022-01-19T04:29:08,335   running build
2022-01-19T04:29:08,336   running build_py
2022-01-19T04:29:08,343   creating build
2022-01-19T04:29:08,344   creating build/lib.linux-armv7l-3.9
2022-01-19T04:29:08,345   creating build/lib.linux-armv7l-3.9/cows
2022-01-19T04:29:08,347   copying src/cows/dtype.py -> build/lib.linux-armv7l-3.9/cows
2022-01-19T04:29:08,352   copying src/cows/skeletonize.py -> build/lib.linux-armv7l-3.9/cows
2022-01-19T04:29:08,355   copying src/cows/arraycrop.py -> build/lib.linux-armv7l-3.9/cows
2022-01-19T04:29:08,359   copying src/cows/filament.py -> build/lib.linux-armv7l-3.9/cows
2022-01-19T04:29:08,362   copying src/cows/catalogue.py -> build/lib.linux-armv7l-3.9/cows
2022-01-19T04:29:08,365   copying src/cows/__init__.py -> build/lib.linux-armv7l-3.9/cows
2022-01-19T04:29:08,367   running egg_info
2022-01-19T04:29:08,436   warning: no previously-included files matching '*.py[cod]' found anywhere in distribution
2022-01-19T04:29:08,437   warning: no previously-included files matching '__pycache__/*' found anywhere in distribution
2022-01-19T04:29:08,439   warning: no previously-included files matching '*.so' found anywhere in distribution
2022-01-19T04:29:08,441   warning: no previously-included files matching '*.dylib' found anywhere in distribution
2022-01-19T04:29:08,453   writing manifest file 'src/pycows.egg-info/SOURCES.txt'
2022-01-19T04:29:08,461   copying src/cows/.DS_Store -> build/lib.linux-armv7l-3.9/cows
2022-01-19T04:29:08,466   copying src/cows/_filament.c -> build/lib.linux-armv7l-3.9/cows
2022-01-19T04:29:08,513   copying src/cows/_filament.pyx -> build/lib.linux-armv7l-3.9/cows
2022-01-19T04:29:08,518   copying src/cows/_skeletonize_3d_cy.cpp -> build/lib.linux-armv7l-3.9/cows
2022-01-19T04:29:08,580   copying src/cows/_skeletonize_3d_cy.pyx -> build/lib.linux-armv7l-3.9/cows
2022-01-19T04:29:08,585   creating build/lib.linux-armv7l-3.9/cows/cows.egg-info
2022-01-19T04:29:08,587   copying src/cows/cows.egg-info/PKG-INFO -> build/lib.linux-armv7l-3.9/cows/cows.egg-info
2022-01-19T04:29:08,591   copying src/cows/cows.egg-info/SOURCES.txt -> build/lib.linux-armv7l-3.9/cows/cows.egg-info
2022-01-19T04:29:08,595   copying src/cows/cows.egg-info/dependency_links.txt -> build/lib.linux-armv7l-3.9/cows/cows.egg-info
2022-01-19T04:29:08,598   copying src/cows/cows.egg-info/not-zip-safe -> build/lib.linux-armv7l-3.9/cows/cows.egg-info
2022-01-19T04:29:08,602   copying src/cows/cows.egg-info/top_level.txt -> build/lib.linux-armv7l-3.9/cows/cows.egg-info
2022-01-19T04:29:08,607   running build_ext
2022-01-19T04:29:08,618   creating build/temp.linux-armv7l-3.9
2022-01-19T04:29:08,618   creating build/temp.linux-armv7l-3.9/src
2022-01-19T04:29:08,619   creating build/temp.linux-armv7l-3.9/src/cows
2022-01-19T04:29:08,621   arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -ffile-prefix-map=/python3.9-3.9.2=. -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -fPIC -I/usr/include/python3.9 -c src/cows/_filament.c -o build/temp.linux-armv7l-3.9/src/cows/_filament.o
2022-01-19T04:29:40,642   arm-linux-gnueabihf-gcc -pthread -shared -Wl,-O1 -Wl,-Bsymbolic-functions -Wl,-z,relro -g -fwrapv -O2 build/temp.linux-armv7l-3.9/src/cows/_filament.o -L/usr/lib -o build/lib.linux-armv7l-3.9/cows/_filament.cpython-39-arm-linux-gnueabihf.so
2022-01-19T04:29:40,983   arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -ffile-prefix-map=/python3.9-3.9.2=. -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -fPIC -I/usr/local/lib/python3.9/dist-packages/numpy/core/include -I/usr/include/python3.9 -c src/cows/_skeletonize_3d_cy.cpp -o build/temp.linux-armv7l-3.9/src/cows/_skeletonize_3d_cy.o
2022-01-19T04:29:41,815   In file included from /usr/local/lib/python3.9/dist-packages/numpy/core/include/numpy/ndarraytypes.h:1960,
2022-01-19T04:29:41,816                    from /usr/local/lib/python3.9/dist-packages/numpy/core/include/numpy/ndarrayobject.h:12,
2022-01-19T04:29:41,816                    from /usr/local/lib/python3.9/dist-packages/numpy/core/include/numpy/arrayobject.h:5,
2022-01-19T04:29:41,816                    from src/cows/_skeletonize_3d_cy.cpp:723:
2022-01-19T04:29:41,817   /usr/local/lib/python3.9/dist-packages/numpy/core/include/numpy/npy_1_7_deprecated_api.h:17:2: warning: #warning "Using deprecated NumPy API, disable it with " "#define NPY_NO_DEPRECATED_API NPY_1_7_API_VERSION" [-Wcpp]
2022-01-19T04:29:41,817      17 | #warning "Using deprecated NumPy API, disable it with " \
2022-01-19T04:29:41,817         |  ^~~~~~~
2022-01-19T04:30:11,349   src/cows/_skeletonize_3d_cy.cpp: In function ‘PyObject* __pyx_pw_4cows_18_skeletonize_3d_cy_1_compute_thin_image(PyObject*, PyObject*, PyObject*)’:
2022-01-19T04:30:11,350   src/cows/_skeletonize_3d_cy.cpp:3062:69: warning: ‘__pyx_v_kmax’ may be used uninitialized in this function [-Wmaybe-uninitialized]
2022-01-19T04:30:11,350    3062 |                     if (unlikely(__pyx_memoryview_slice_memviewslice(
2022-01-19T04:30:11,351         |                                                                     ^
2022-01-19T04:30:11,351   src/cows/_skeletonize_3d_cy.cpp:2831:12: note: ‘__pyx_v_kmax’ was declared here
2022-01-19T04:30:11,352    2831 |   npy_intp __pyx_v_kmax;
2022-01-19T04:30:11,352         |            ^~~~~~~~~~~~
2022-01-19T04:30:11,352   src/cows/_skeletonize_3d_cy.cpp:3079:49: warning: ‘__pyx_v_jmax’ may be used uninitialized in this function [-Wmaybe-uninitialized]
2022-01-19T04:30:11,353    3079 | if (unlikely(__pyx_memoryview_slice_memviewslice(
2022-01-19T04:30:11,353         |                                                 ^
2022-01-19T04:30:11,353   src/cows/_skeletonize_3d_cy.cpp:2830:12: note: ‘__pyx_v_jmax’ was declared here
2022-01-19T04:30:11,354    2830 |   npy_intp __pyx_v_jmax;
2022-01-19T04:30:11,354         |            ^~~~~~~~~~~~
2022-01-19T04:30:11,354   src/cows/_skeletonize_3d_cy.cpp:3096:49: warning: ‘__pyx_v_imax’ may be used uninitialized in this function [-Wmaybe-uninitialized]
2022-01-19T04:30:11,355    3096 | if (unlikely(__pyx_memoryview_slice_memviewslice(
2022-01-19T04:30:11,355         |                                                 ^
2022-01-19T04:30:11,355   src/cows/_skeletonize_3d_cy.cpp:2829:12: note: ‘__pyx_v_imax’ was declared here
2022-01-19T04:30:11,356    2829 |   npy_intp __pyx_v_imax;
2022-01-19T04:30:11,356         |            ^~~~~~~~~~~~
2022-01-19T04:30:16,302   arm-linux-gnueabihf-g++ -pthread -shared -Wl,-O1 -Wl,-Bsymbolic-functions -Wl,-z,relro -g -fwrapv -O2 build/temp.linux-armv7l-3.9/src/cows/_skeletonize_3d_cy.o -L/usr/lib -o build/lib.linux-armv7l-3.9/cows/_skeletonize_3d_cy.cpython-39-arm-linux-gnueabihf.so
2022-01-19T04:30:16,965   /usr/local/lib/python3.9/dist-packages/setuptools/command/install.py:34: SetuptoolsDeprecationWarning: setup.py install is deprecated. Use build and pip and other standards-based tools.
2022-01-19T04:30:16,965     warnings.warn(
2022-01-19T04:30:16,970   running install
2022-01-19T04:30:17,032   running install_lib
2022-01-19T04:30:17,039   creating build/bdist.linux-armv7l
2022-01-19T04:30:17,039   creating build/bdist.linux-armv7l/wheel
2022-01-19T04:30:17,043   creating build/bdist.linux-armv7l/wheel/cows
2022-01-19T04:30:17,220   creating build/bdist.linux-armv7l/wheel/cows/cows.egg-info
2022-01-19T04:30:17,312   running install_egg_info
2022-01-19T04:30:17,329   Copying src/pycows.egg-info to build/bdist.linux-armv7l/wheel/pycows-0.0.1-py3.9.egg-info
2022-01-19T04:30:17,350   running install_scripts
2022-01-19T04:30:19,403   Building wheel for pycows (setup.py): finished with status 'done'
2022-01-19T04:30:19,438   Created wheel for pycows: filename=pycows-0.0.1-cp39-cp39-linux_armv7l.whl size=953311 sha256=620b7d457f97677445e2da065033c55a495223118fb894fa405d4a64d2f9d1bc
2022-01-19T04:30:19,439   Stored in directory: /tmp/pip-ephem-wheel-cache-jnva3g1n/wheels/fc/8a/5e/f673bf69a5f948c0070ad1c74a59da4d42b150bf80290bbd12
2022-01-19T04:30:19,464 Successfully built pycows
2022-01-19T04:30:19,541 Removed build tracker: '/tmp/pip-req-tracker-vzzjna8y'