2022-01-19T10:04:18,616 Created temporary directory: /tmp/pip-ephem-wheel-cache-ey0q556s
2022-01-19T10:04:18,622 Created temporary directory: /tmp/pip-req-tracker-4kxcsp1k
2022-01-19T10:04:18,623 Initialized build tracking at /tmp/pip-req-tracker-4kxcsp1k
2022-01-19T10:04:18,623 Created build tracker: /tmp/pip-req-tracker-4kxcsp1k
2022-01-19T10:04:18,624 Entered build tracker: /tmp/pip-req-tracker-4kxcsp1k
2022-01-19T10:04:18,625 Created temporary directory: /tmp/pip-wheel-1p9mseor
2022-01-19T10:04:18,691 Looking in indexes: https://pypi.org/simple, https://www.piwheels.org/simple
2022-01-19T10:04:18,697 2 location(s) to search for versions of capice:
2022-01-19T10:04:18,697 * https://pypi.org/simple/capice/
2022-01-19T10:04:18,697 * https://www.piwheels.org/simple/capice/
2022-01-19T10:04:18,698 Fetching project page and analyzing links: https://pypi.org/simple/capice/
2022-01-19T10:04:18,699 Getting page https://pypi.org/simple/capice/
2022-01-19T10:04:18,702 Found index url https://pypi.org/simple
2022-01-19T10:04:18,918   Found link https://files.pythonhosted.org/packages/2b/cf/eeb11d53ea46d9463d108113249f8a5b8c3023b3822835fd2579c3351924/capice-3.0.0rc0.tar.gz#sha256=580f1298bafd091d86b5ded841588032f72e40035de04a7ec5fc1516c9edc2b2 (from https://pypi.org/simple/capice/) (requires-python:>=3.7), version: 3.0.0rc0
2022-01-19T10:04:18,919 Fetching project page and analyzing links: https://www.piwheels.org/simple/capice/
2022-01-19T10:04:18,920 Getting page https://www.piwheels.org/simple/capice/
2022-01-19T10:04:18,922 Found index url https://www.piwheels.org/simple
2022-01-19T10:04:19,134 Skipping link: not a file: https://www.piwheels.org/simple/capice/
2022-01-19T10:04:19,135 Skipping link: not a file: https://pypi.org/simple/capice/
2022-01-19T10:04:19,166 Given no hashes to check 1 links for project 'capice': discarding no candidates
2022-01-19T10:04:19,194 Collecting capice==3.0.0rc0
2022-01-19T10:04:19,197   Created temporary directory: /tmp/pip-unpack-kxp09ab3
2022-01-19T10:04:19,437   Downloading capice-3.0.0rc0.tar.gz (42 kB)
2022-01-19T10:04:19,858   Added capice==3.0.0rc0 from https://files.pythonhosted.org/packages/2b/cf/eeb11d53ea46d9463d108113249f8a5b8c3023b3822835fd2579c3351924/capice-3.0.0rc0.tar.gz#sha256=580f1298bafd091d86b5ded841588032f72e40035de04a7ec5fc1516c9edc2b2 to build tracker '/tmp/pip-req-tracker-4kxcsp1k'
2022-01-19T10:04:19,860   Running setup.py (path:/tmp/pip-wheel-1p9mseor/capice_bd8149b1c5d04a4bb7dd3770f7b0ebdd/setup.py) egg_info for package capice
2022-01-19T10:04:19,861   Created temporary directory: /tmp/pip-pip-egg-info-nl95dzc8
2022-01-19T10:04:19,862   Preparing metadata (setup.py): started
2022-01-19T10:04:19,863   Running command python setup.py egg_info
2022-01-19T10:04:21,776   running egg_info
2022-01-19T10:04:21,781   creating /tmp/pip-pip-egg-info-nl95dzc8/capice.egg-info
2022-01-19T10:04:21,797   writing manifest file '/tmp/pip-pip-egg-info-nl95dzc8/capice.egg-info/SOURCES.txt'
2022-01-19T10:04:21,838   writing manifest file '/tmp/pip-pip-egg-info-nl95dzc8/capice.egg-info/SOURCES.txt'
2022-01-19T10:04:21,964   Preparing metadata (setup.py): finished with status 'done'
2022-01-19T10:04:21,974   Source in /tmp/pip-wheel-1p9mseor/capice_bd8149b1c5d04a4bb7dd3770f7b0ebdd has version 3.0.0rc0, which satisfies requirement capice==3.0.0rc0 from https://files.pythonhosted.org/packages/2b/cf/eeb11d53ea46d9463d108113249f8a5b8c3023b3822835fd2579c3351924/capice-3.0.0rc0.tar.gz#sha256=580f1298bafd091d86b5ded841588032f72e40035de04a7ec5fc1516c9edc2b2
2022-01-19T10:04:21,976   Removed capice==3.0.0rc0 from https://files.pythonhosted.org/packages/2b/cf/eeb11d53ea46d9463d108113249f8a5b8c3023b3822835fd2579c3351924/capice-3.0.0rc0.tar.gz#sha256=580f1298bafd091d86b5ded841588032f72e40035de04a7ec5fc1516c9edc2b2 from build tracker '/tmp/pip-req-tracker-4kxcsp1k'
2022-01-19T10:04:21,991 Created temporary directory: /tmp/pip-unpack-j3a5oikg
2022-01-19T10:04:21,992 Building wheels for collected packages: capice
2022-01-19T10:04:22,000   Created temporary directory: /tmp/pip-wheel-4v2i556s
2022-01-19T10:04:22,001   Building wheel for capice (setup.py): started
2022-01-19T10:04:22,002   Destination directory: /tmp/pip-wheel-4v2i556s
2022-01-19T10:04:22,002   Running command /usr/bin/python3 -u -c 'import io, os, sys, setuptools, tokenize; sys.argv[0] = '"'"'/tmp/pip-wheel-1p9mseor/capice_bd8149b1c5d04a4bb7dd3770f7b0ebdd/setup.py'"'"'; __file__='"'"'/tmp/pip-wheel-1p9mseor/capice_bd8149b1c5d04a4bb7dd3770f7b0ebdd/setup.py'"'"';f = getattr(tokenize, '"'"'open'"'"', open)(__file__) if os.path.exists(__file__) else io.StringIO('"'"'from setuptools import setup; setup()'"'"');code = f.read().replace('"'"'\r\n'"'"', '"'"'\n'"'"');f.close();exec(compile(code, __file__, '"'"'exec'"'"'))' bdist_wheel -d /tmp/pip-wheel-4v2i556s
2022-01-19T10:04:23,958   running bdist_wheel
2022-01-19T10:04:23,966   running build
2022-01-19T10:04:23,967   running build_py
2022-01-19T10:04:23,975   creating build
2022-01-19T10:04:23,976   creating build/lib
2022-01-19T10:04:23,977   creating build/lib/main
2022-01-19T10:04:23,979   copying src/main/__init__.py -> build/lib/main
2022-01-19T10:04:23,983   creating build/lib/main/python
2022-01-19T10:04:23,985   copying src/main/python/__init__.py -> build/lib/main/python
2022-01-19T10:04:23,988   copying src/main/python/__version__.py -> build/lib/main/python
2022-01-19T10:04:23,992   creating build/lib/main/python/cli
2022-01-19T10:04:23,994   copying src/main/python/cli/__init__.py -> build/lib/main/python/cli
2022-01-19T10:04:23,997   copying src/main/python/cli/args_handler_predict.py -> build/lib/main/python/cli
2022-01-19T10:04:24,000   copying src/main/python/cli/args_handler_parent.py -> build/lib/main/python/cli
2022-01-19T10:04:24,003   copying src/main/python/cli/args_handler_train.py -> build/lib/main/python/cli
2022-01-19T10:04:24,010   creating build/lib/main/python/vep
2022-01-19T10:04:24,011   copying src/main/python/vep/cdna_position.py -> build/lib/main/python/vep
2022-01-19T10:04:24,015   copying src/main/python/vep/cds_position.py -> build/lib/main/python/vep
2022-01-19T10:04:24,018   copying src/main/python/vep/__init__.py -> build/lib/main/python/vep
2022-01-19T10:04:24,020   copying src/main/python/vep/motif_name.py -> build/lib/main/python/vep
2022-01-19T10:04:24,024   copying src/main/python/vep/sift.py -> build/lib/main/python/vep
2022-01-19T10:04:24,027   copying src/main/python/vep/motif_e_score_change.py -> build/lib/main/python/vep
2022-01-19T10:04:24,030   copying src/main/python/vep/protein_position.py -> build/lib/main/python/vep
2022-01-19T10:04:24,033   copying src/main/python/vep/length.py -> build/lib/main/python/vep
2022-01-19T10:04:24,036   copying src/main/python/vep/template_sift_polyphen.py -> build/lib/main/python/vep
2022-01-19T10:04:24,039   copying src/main/python/vep/type.py -> build/lib/main/python/vep
2022-01-19T10:04:24,043   copying src/main/python/vep/poly_phen.py -> build/lib/main/python/vep
2022-01-19T10:04:24,046   copying src/main/python/vep/domain.py -> build/lib/main/python/vep
2022-01-19T10:04:24,049   copying src/main/python/vep/amino_acids.py -> build/lib/main/python/vep
2022-01-19T10:04:24,052   copying src/main/python/vep/seq.py -> build/lib/main/python/vep
2022-01-19T10:04:24,055   copying src/main/python/vep/template_position.py -> build/lib/main/python/vep
2022-01-19T10:04:24,058   copying src/main/python/vep/template.py -> build/lib/main/python/vep
2022-01-19T10:04:24,061   copying src/main/python/vep/cons_detail.py -> build/lib/main/python/vep
2022-01-19T10:04:24,064   copying src/main/python/vep/motif_ehi_pos.py -> build/lib/main/python/vep
2022-01-19T10:04:24,070   creating build/lib/main/python/utilities
2022-01-19T10:04:24,071   copying src/main/python/utilities/input_parser.py -> build/lib/main/python/utilities
2022-01-19T10:04:24,074   copying src/main/python/utilities/capice_imputing.py -> build/lib/main/python/utilities
2022-01-19T10:04:24,077   copying src/main/python/utilities/__init__.py -> build/lib/main/python/utilities
2022-01-19T10:04:24,079   copying src/main/python/utilities/input_processor.py -> build/lib/main/python/utilities
2022-01-19T10:04:24,082   copying src/main/python/utilities/predictor.py -> build/lib/main/python/utilities
2022-01-19T10:04:24,086   copying src/main/python/utilities/load_file_postprocessor.py -> build/lib/main/python/utilities
2022-01-19T10:04:24,089   copying src/main/python/utilities/manual_vep_processor.py -> build/lib/main/python/utilities
2022-01-19T10:04:24,092   copying src/main/python/utilities/preprocessor.py -> build/lib/main/python/utilities
2022-01-19T10:04:24,096   copying src/main/python/utilities/utilities.py -> build/lib/main/python/utilities
2022-01-19T10:04:24,099   copying src/main/python/utilities/custom_logging_filter.py -> build/lib/main/python/utilities
2022-01-19T10:04:24,102   copying src/main/python/utilities/enums.py -> build/lib/main/python/utilities
2022-01-19T10:04:24,105   copying src/main/python/utilities/dynamic_loader.py -> build/lib/main/python/utilities
2022-01-19T10:04:24,110   creating build/lib/main/python/core
2022-01-19T10:04:24,111   copying src/main/python/core/__init__.py -> build/lib/main/python/core
2022-01-19T10:04:24,114   copying src/main/python/core/capice_manager.py -> build/lib/main/python/core
2022-01-19T10:04:24,118   copying src/main/python/core/capice_exporter.py -> build/lib/main/python/core
2022-01-19T10:04:24,121   copying src/main/python/core/args_handler.py -> build/lib/main/python/core
2022-01-19T10:04:24,124   copying src/main/python/core/logger.py -> build/lib/main/python/core
2022-01-19T10:04:24,129   creating build/lib/main/python/validators
2022-01-19T10:04:24,131   copying src/main/python/validators/post_file_parse_validator.py -> build/lib/main/python/validators
2022-01-19T10:04:24,134   copying src/main/python/validators/__init__.py -> build/lib/main/python/validators
2022-01-19T10:04:24,137   copying src/main/python/validators/post_vep_processing_validator.py -> build/lib/main/python/validators
2022-01-19T10:04:24,140   copying src/main/python/validators/input_validator.py -> build/lib/main/python/validators
2022-01-19T10:04:24,144   copying src/main/python/validators/property_type_validator.py -> build/lib/main/python/validators
2022-01-19T10:04:24,168   /usr/local/lib/python3.7/dist-packages/setuptools/command/install.py:37: SetuptoolsDeprecationWarning: setup.py install is deprecated. Use build and pip and other standards-based tools.
2022-01-19T10:04:24,168     setuptools.SetuptoolsDeprecationWarning,
2022-01-19T10:04:24,172   running install
2022-01-19T10:04:24,235   running install_lib
2022-01-19T10:04:24,241   creating build/bdist.linux-armv7l
2022-01-19T10:04:24,242   creating build/bdist.linux-armv7l/wheel
2022-01-19T10:04:24,245   creating build/bdist.linux-armv7l/wheel/main
2022-01-19T10:04:24,252   creating build/bdist.linux-armv7l/wheel/main/python
2022-01-19T10:04:24,254   creating build/bdist.linux-armv7l/wheel/main/python/cli
2022-01-19T10:04:24,277   creating build/bdist.linux-armv7l/wheel/main/python/vep
2022-01-19T10:04:24,340   creating build/bdist.linux-armv7l/wheel/main/python/utilities
2022-01-19T10:04:24,381   creating build/bdist.linux-armv7l/wheel/main/python/core
2022-01-19T10:04:24,399   creating build/bdist.linux-armv7l/wheel/main/python/validators
2022-01-19T10:04:24,414   running install_egg_info
2022-01-19T10:04:24,452   running egg_info
2022-01-19T10:04:24,518   writing manifest file 'src/capice.egg-info/SOURCES.txt'
2022-01-19T10:04:24,521   Copying src/capice.egg-info to build/bdist.linux-armv7l/wheel/capice-3.0.0rc0-py3.7.egg-info
2022-01-19T10:04:24,544   running install_scripts
2022-01-19T10:04:25,040   Building wheel for capice (setup.py): finished with status 'done'
2022-01-19T10:04:25,045   Created wheel for capice: filename=capice-3.0.0rc0-py3-none-any.whl size=42391 sha256=db7e870e65a264aa8b90e67c7ad2b62ed2662d850fac021fe20eafa759ccd21a
2022-01-19T10:04:25,046   Stored in directory: /tmp/pip-ephem-wheel-cache-ey0q556s/wheels/6e/b3/f6/4f025bca1c3be12ba1fce72430dd933a9cc6d6cd80508b302c
2022-01-19T10:04:25,075 Successfully built capice
2022-01-19T10:04:25,082 Removed build tracker: '/tmp/pip-req-tracker-4kxcsp1k'