2022-01-19T17:59:39,670 Created temporary directory: /tmp/pip-ephem-wheel-cache-0fi5payy 2022-01-19T17:59:39,677 Created temporary directory: /tmp/pip-req-tracker-aegojaoa 2022-01-19T17:59:39,678 Initialized build tracking at /tmp/pip-req-tracker-aegojaoa 2022-01-19T17:59:39,678 Created build tracker: /tmp/pip-req-tracker-aegojaoa 2022-01-19T17:59:39,679 Entered build tracker: /tmp/pip-req-tracker-aegojaoa 2022-01-19T17:59:39,680 Created temporary directory: /tmp/pip-wheel-3c8vz3e_ 2022-01-19T17:59:39,752 Looking in indexes: https://pypi.org/simple, https://www.piwheels.org/simple 2022-01-19T17:59:39,755 2 location(s) to search for versions of damona: 2022-01-19T17:59:39,755 * https://pypi.org/simple/damona/ 2022-01-19T17:59:39,755 * https://www.piwheels.org/simple/damona/ 2022-01-19T17:59:39,756 Fetching project page and analyzing links: https://pypi.org/simple/damona/ 2022-01-19T17:59:39,758 Getting page https://pypi.org/simple/damona/ 2022-01-19T17:59:39,762 Found index url https://pypi.org/simple 2022-01-19T17:59:40,163 Found link https://files.pythonhosted.org/packages/cd/9e/27ac1c5e27caa58f2d161dff75c5c4cdd92670440b07e7709802a9459b9c/damona-0.1.0.tar.gz#sha256=ffd1316e321796f0fa5a56b54f75dd4f5d927ecf0bc9c1a336f160f038ae6890 (from https://pypi.org/simple/damona/), version: 0.1.0 2022-01-19T17:59:40,164 Found link https://files.pythonhosted.org/packages/c9/20/7fe4d2f1c34300ed845a3b033a8cd8b3de72b82a25599330b10e2317ca48/damona-0.1.1.tar.gz#sha256=b5c70b83f51e4d32f2f3dda532abf3713a177b8e5ef7a0b26a44a801a0313236 (from https://pypi.org/simple/damona/), version: 0.1.1 2022-01-19T17:59:40,165 Found link https://files.pythonhosted.org/packages/36/9b/153b2e8849b6cf3b78ac13c3e30fbd4f1774c31b7b34cb849eb3a14bf69c/damona-0.2.0.tar.gz#sha256=6023b50d62eb18c216383a96021bf88cdf651ebc741397892b74bc49d642bdc1 (from https://pypi.org/simple/damona/), version: 0.2.0 2022-01-19T17:59:40,166 Found link https://files.pythonhosted.org/packages/5d/85/e936fbc729383625e399b7dabd3238995c915084986ec573588855c921ee/damona-0.2.1.tar.gz#sha256=69aa6cb1042ad0bf06363f68867de0fec1be4cf717d73574829d15967fadf019 (from https://pypi.org/simple/damona/), version: 0.2.1 2022-01-19T17:59:40,167 Found link https://files.pythonhosted.org/packages/d8/72/c819e18fd5dcf8abe904e97240b4adb023e80b73a311ca4cddd0f8b6509c/damona-0.2.2.tar.gz#sha256=e8eced44b5c69ff5c0b87977969c0942017163e78203fcdccd8591c5d78a7a22 (from https://pypi.org/simple/damona/), version: 0.2.2 2022-01-19T17:59:40,168 Found link https://files.pythonhosted.org/packages/2a/2f/3eca4d23aad1c0df2a1f708f49fd68de86b47fb3ff0b7270182074adbe24/damona-0.3.0.tar.gz#sha256=d87f56f4c50b9f87c6ef42a8c2ee9642e404889894524acd879dbfa301d88477 (from https://pypi.org/simple/damona/), version: 0.3.0 2022-01-19T17:59:40,169 Found link https://files.pythonhosted.org/packages/a4/85/cf3ba30aadaf7e322c200ff61874eb24a3ded6d64ad308d15760d26338f1/damona-0.3.1.tar.gz#sha256=a99d48dcfb750e079771ae08e93ade1b0223cc08744cc65bf5d9623771c74439 (from https://pypi.org/simple/damona/), version: 0.3.1 2022-01-19T17:59:40,170 Found link https://files.pythonhosted.org/packages/c2/ef/1a8417b608f9a1f46749cea5ef2cd0bef0e2e9449182baa65ef403b9bd6e/damona-0.4.0.tar.gz#sha256=533275af540923fe2ff8a67b0ee49852cfa322880906e32461b79019aecf444e (from https://pypi.org/simple/damona/), version: 0.4.0 2022-01-19T17:59:40,171 Found link https://files.pythonhosted.org/packages/66/87/cc314bac96ca0afc29e95d91a07d70c56df5c37cb4209f8bfc4eb959418a/damona-0.4.1.tar.gz#sha256=cc5f816a84aca53cae91d7c851a2023bbea9f9f6bf5c8a3f4ac2a3d5f7588340 (from https://pypi.org/simple/damona/), version: 0.4.1 2022-01-19T17:59:40,172 Found link https://files.pythonhosted.org/packages/50/5a/2b91d89732ad7eabd61d2060de0ecc94c4a04c25999f199d2cb93ff943e5/damona-0.4.2.tar.gz#sha256=13f160a7c327acad47e006164bd84e766c94e36f50fe0eef3617a0031b1a2a5f (from https://pypi.org/simple/damona/), version: 0.4.2 2022-01-19T17:59:40,173 Found link https://files.pythonhosted.org/packages/e5/d8/0d4fe942e4a6dd2b5a45ac16a038f99dbea115dde61c41aec5f2815ef2a6/damona-0.4.3.tar.gz#sha256=ccd9e632ac9e87e2dd4774cad490a80de8c91391ca9f1f42ca44f27a41782edc (from https://pypi.org/simple/damona/), version: 0.4.3 2022-01-19T17:59:40,174 Found link https://files.pythonhosted.org/packages/9e/e0/d085c328e8cc39ca40e2176f3c5c5ffeb66e1271abeeb36f863c5acb8bc1/damona-0.5.0.tar.gz#sha256=6742de042d81a26a288ad91fb2824fd5cede8f6f2d593238ab65ef88ddb85108 (from https://pypi.org/simple/damona/), version: 0.5.0 2022-01-19T17:59:40,174 Found link https://files.pythonhosted.org/packages/73/65/3e225ffc73fe435cc40b8658c3838e18b66bac46c2f2227c858c1751b485/damona-0.5.1.tar.gz#sha256=3d74601d8dc7e8fea702c5932b8eb699b1e0496e01cd714051e05a63de254694 (from https://pypi.org/simple/damona/), version: 0.5.1 2022-01-19T17:59:40,175 Found link https://files.pythonhosted.org/packages/09/b4/f0570169435b2629cac80df83e3140b82a480cdfd795f8f6c54c4c36d53e/damona-0.5.2.tar.gz#sha256=1e6f0abd77e643ef7f78e226078fd426d4948fe4b4d04689aacb798b985b0145 (from https://pypi.org/simple/damona/), version: 0.5.2 2022-01-19T17:59:40,176 Found link https://files.pythonhosted.org/packages/34/85/cce2fff4d9e5c90ac7dc665db03e0c134fd23930d6fe7168e3fd48a7899a/damona-0.5.3.tar.gz#sha256=74f6d29827606ee27123183a7eae6e19392d705c5637a1517abfb802ccf5e1ed (from https://pypi.org/simple/damona/), version: 0.5.3 2022-01-19T17:59:40,177 Found link https://files.pythonhosted.org/packages/94/69/89c64bbc8ccd86ac96042fd140a8c0a39f0168d685f82445361e46d64734/damona-0.5.4.tar.gz#sha256=14a1467edaf9b65c5826576f851cad3283cbf5b092c34a54d625ecfb33de428f (from https://pypi.org/simple/damona/), version: 0.5.4 2022-01-19T17:59:40,178 Found link https://files.pythonhosted.org/packages/c0/d8/0edd345b42fb10ec5615463a6362c71abbf7182ae0a64a366586a752924a/damona-0.5.5.tar.gz#sha256=a7882b0bd52aca79f143740e427ed7d139849c1f1298abb8ad1d0b840f482be0 (from https://pypi.org/simple/damona/), version: 0.5.5 2022-01-19T17:59:40,179 Found link https://files.pythonhosted.org/packages/21/64/ec1a9f94d2727191a6b09dddbf464cb190a1c94a7016f5b7d0db7c6ab65a/damona-0.6.0.tar.gz#sha256=b93b4dcb487e319a450747582bb68b8778bc8d0f9620e0c90f9ac837759528b8 (from https://pypi.org/simple/damona/), version: 0.6.0 2022-01-19T17:59:40,180 Found link https://files.pythonhosted.org/packages/02/98/e4f8fb789585c125ad574845a8f43b6996b97979995cf77f088b6e166a57/damona-0.7.0.tar.gz#sha256=a6f769bcac0be68698c5a80a452e841e04b03ff3298d27fe936f15fab88880fc (from https://pypi.org/simple/damona/), version: 0.7.0 2022-01-19T17:59:40,181 Found link https://files.pythonhosted.org/packages/3d/af/463f5754f4f79152d2ca30c232f95364848b6eccc4e8da0bcd039797c13f/damona-0.7.1.tar.gz#sha256=8ecd10eb863af7a556dd6a77f01add532ab4ac05f95f40c689f8b98f7ddad474 (from https://pypi.org/simple/damona/), version: 0.7.1 2022-01-19T17:59:40,181 Found link https://files.pythonhosted.org/packages/b3/e4/7c0cb559030b0a10ef0b8b0e89778fee71357d01c681ff3a8e31633f139f/damona-0.8.0.tar.gz#sha256=ea2976ed1969cb323b5a8921c98ce4070c4306fdd574af0d5e5349b8a3920166 (from https://pypi.org/simple/damona/), version: 0.8.0 2022-01-19T17:59:40,182 Found link https://files.pythonhosted.org/packages/64/52/7792503fca117af6cd5b401c8cc162c24b1b066630c398d104a9bf1edef8/damona-0.8.1.tar.gz#sha256=c8152a239dee35642179803c06b0b25147f70a5c2cba56ff144437aaa9109154 (from https://pypi.org/simple/damona/), version: 0.8.1 2022-01-19T17:59:40,183 Fetching project page and analyzing links: https://www.piwheels.org/simple/damona/ 2022-01-19T17:59:40,184 Getting page https://www.piwheels.org/simple/damona/ 2022-01-19T17:59:40,187 Found index url https://www.piwheels.org/simple 2022-01-19T17:59:40,424 Skipping link: No binaries permitted for damona: https://www.piwheels.org/simple/damona/damona-0.2.2-py3-none-any.whl#sha256=9165891e105689e76d95ddf46067837a1ee8b13d1d3af36b5af846c1b8ee4b92 (from https://www.piwheels.org/simple/damona/) 2022-01-19T17:59:40,425 Skipping link: No binaries permitted for damona: https://www.piwheels.org/simple/damona/damona-0.3.0-py3-none-any.whl#sha256=b9bad2b5e81d6bdca4b895a2d7dfcd19a5450509889904d9840f447a3a5a5f11 (from https://www.piwheels.org/simple/damona/) 2022-01-19T17:59:40,425 Skipping link: No binaries permitted for damona: https://www.piwheels.org/simple/damona/damona-0.3.1-py3-none-any.whl#sha256=934799d1cf5a920bc199416dc79952e268359cc4ad20d561571fd85e4c2d84dc (from https://www.piwheels.org/simple/damona/) 2022-01-19T17:59:40,426 Skipping link: No binaries permitted for damona: https://www.piwheels.org/simple/damona/damona-0.4.0-py3-none-any.whl#sha256=131eb91e5a14664d9a717ad2a12025787ed02a761336318d57de6076bbfe0695 (from https://www.piwheels.org/simple/damona/) 2022-01-19T17:59:40,427 Skipping link: No binaries permitted for damona: https://www.piwheels.org/simple/damona/damona-0.4.1-py3-none-any.whl#sha256=87fafcd2a349a2c12e3f28edb48015a402a3e50f89c4da8072167483d0d7a200 (from https://www.piwheels.org/simple/damona/) 2022-01-19T17:59:40,427 Skipping link: No binaries permitted for damona: https://www.piwheels.org/simple/damona/damona-0.4.2-py3-none-any.whl#sha256=326ee5f5e021f463128cc57ff6f3ff6129f46271dfaf4f823a5645f2e94d7aa4 (from https://www.piwheels.org/simple/damona/) 2022-01-19T17:59:40,428 Skipping link: No binaries permitted for damona: https://www.piwheels.org/simple/damona/damona-0.4.3-py3-none-any.whl#sha256=7b05aa70e5bb4664074b7b3d9b63873f9aa72e29217bf7a971614685c338107e (from https://www.piwheels.org/simple/damona/) 2022-01-19T17:59:40,429 Skipping link: No binaries permitted for damona: https://www.piwheels.org/simple/damona/damona-0.5.0-py3-none-any.whl#sha256=2b105c2097bf8572e7d57f7b842123852413d4d1266886b21d4f1e94b0d25109 (from https://www.piwheels.org/simple/damona/) 2022-01-19T17:59:40,429 Skipping link: No binaries permitted for damona: https://www.piwheels.org/simple/damona/damona-0.5.1-py3-none-any.whl#sha256=5a3fb6b370b13c5085238e60671c083d51b2afa8ca94314f8c382b46b4fecc0a (from https://www.piwheels.org/simple/damona/) 2022-01-19T17:59:40,430 Skipping link: No binaries permitted for damona: https://www.piwheels.org/simple/damona/damona-0.5.2-py3-none-any.whl#sha256=96b9d98f2692a8ed1bd3d044f9cbd041d99762fcc2003f9e4c657e7bb885a061 (from https://www.piwheels.org/simple/damona/) 2022-01-19T17:59:40,430 Skipping link: No binaries permitted for damona: https://www.piwheels.org/simple/damona/damona-0.5.3-py3-none-any.whl#sha256=c4e616966557b5bdf1adb7658f29a695e17d0f74b00c292ec912da0a37907ba8 (from https://www.piwheels.org/simple/damona/) 2022-01-19T17:59:40,431 Skipping link: No binaries permitted for damona: https://www.piwheels.org/simple/damona/damona-0.5.4-py3-none-any.whl#sha256=d6be5e498a49e3228ff56e0445cf57642d10bfb8a523b4f6839f5998051feb50 (from https://www.piwheels.org/simple/damona/) 2022-01-19T17:59:40,432 Skipping link: No binaries permitted for damona: https://www.piwheels.org/simple/damona/damona-0.5.5-py3-none-any.whl#sha256=250ccf2df08abd139089d4fb2e79006e5bd203c3a0a52f44d1f9284a73f0d925 (from https://www.piwheels.org/simple/damona/) 2022-01-19T17:59:40,433 Skipping link: No binaries permitted for damona: https://www.piwheels.org/simple/damona/damona-0.6.0-py3-none-any.whl#sha256=0c08f84a6315a8a73a113852e981e28107e73b00ea14400876449661d4f4f5ff (from https://www.piwheels.org/simple/damona/) 2022-01-19T17:59:40,433 Skipping link: No binaries permitted for damona: https://www.piwheels.org/simple/damona/damona-0.7.0-py3-none-any.whl#sha256=5042f04e5365017dbee446034c186e0e74a6e10e69b97159d4e7583d6eb978b8 (from https://www.piwheels.org/simple/damona/) 2022-01-19T17:59:40,434 Skipping link: No binaries permitted for damona: https://www.piwheels.org/simple/damona/damona-0.7.1-py3-none-any.whl#sha256=5e66c86b9d54bddb8e202de5271f8eee2126fee535b1d9907ff06574405c9ee5 (from https://www.piwheels.org/simple/damona/) 2022-01-19T17:59:40,434 Skipping link: No binaries permitted for damona: https://www.piwheels.org/simple/damona/damona-0.8.0-py3-none-any.whl#sha256=2e21d72a65141ba9d76a6971a8d8c1618964ddc7b0e126ea8282260b974c3b65 (from https://www.piwheels.org/simple/damona/) 2022-01-19T17:59:40,474 Given no hashes to check 1 links for project 'damona': discarding no candidates 2022-01-19T17:59:40,507 Collecting damona==0.8.1 2022-01-19T17:59:40,510 Created temporary directory: /tmp/pip-unpack-cw6gv6so 2022-01-19T17:59:40,737 Downloading damona-0.8.1.tar.gz (432 kB) 2022-01-19T17:59:41,936 Added damona==0.8.1 from https://files.pythonhosted.org/packages/64/52/7792503fca117af6cd5b401c8cc162c24b1b066630c398d104a9bf1edef8/damona-0.8.1.tar.gz#sha256=c8152a239dee35642179803c06b0b25147f70a5c2cba56ff144437aaa9109154 to build tracker '/tmp/pip-req-tracker-aegojaoa' 2022-01-19T17:59:41,939 Running setup.py (path:/tmp/pip-wheel-3c8vz3e_/damona_8a7a16384e7d48dca54df5457a3383b4/setup.py) egg_info for package damona 2022-01-19T17:59:41,942 Created temporary directory: /tmp/pip-pip-egg-info-966lwpqw 2022-01-19T17:59:41,943 Running command python setup.py egg_info 2022-01-19T17:59:44,392 running egg_info 2022-01-19T17:59:44,397 creating /tmp/pip-pip-egg-info-966lwpqw/damona.egg-info 2022-01-19T17:59:44,399 writing dependency_links to /tmp/pip-pip-egg-info-966lwpqw/damona.egg-info/dependency_links.txt 2022-01-19T17:59:44,402 writing /tmp/pip-pip-egg-info-966lwpqw/damona.egg-info/PKG-INFO 2022-01-19T17:59:44,410 writing requirements to /tmp/pip-pip-egg-info-966lwpqw/damona.egg-info/requires.txt 2022-01-19T17:59:44,413 writing top-level names to /tmp/pip-pip-egg-info-966lwpqw/damona.egg-info/top_level.txt 2022-01-19T17:59:44,416 writing entry points to /tmp/pip-pip-egg-info-966lwpqw/damona.egg-info/entry_points.txt 2022-01-19T17:59:44,421 writing manifest file '/tmp/pip-pip-egg-info-966lwpqw/damona.egg-info/SOURCES.txt' 2022-01-19T17:59:44,855 reading manifest file '/tmp/pip-pip-egg-info-966lwpqw/damona.egg-info/SOURCES.txt' 2022-01-19T17:59:44,858 reading manifest template 'MANIFEST.in' 2022-01-19T17:59:44,861 warning: no previously-included files matching '__pycache__' found under directory '*' 2022-01-19T17:59:44,863 warning: no previously-included files matching '*pyc' found under directory '*' 2022-01-19T17:59:44,865 warning: no previously-included files matching 'test' found under directory '*' 2022-01-19T17:59:44,869 warning: no files found matching '.requirements_dev.txt' 2022-01-19T17:59:44,870 warning: no files found matching 'damona/shell/*.sh' 2022-01-19T17:59:44,871 no previously-included directories found matching 'test' 2022-01-19T17:59:44,872 no previously-included directories found matching 'doc' 2022-01-19T17:59:44,885 writing manifest file '/tmp/pip-pip-egg-info-966lwpqw/damona.egg-info/SOURCES.txt' 2022-01-19T17:59:45,048 Source in /tmp/pip-wheel-3c8vz3e_/damona_8a7a16384e7d48dca54df5457a3383b4 has version 0.8.1, which satisfies requirement damona==0.8.1 from https://files.pythonhosted.org/packages/64/52/7792503fca117af6cd5b401c8cc162c24b1b066630c398d104a9bf1edef8/damona-0.8.1.tar.gz#sha256=c8152a239dee35642179803c06b0b25147f70a5c2cba56ff144437aaa9109154 2022-01-19T17:59:45,050 Removed damona==0.8.1 from https://files.pythonhosted.org/packages/64/52/7792503fca117af6cd5b401c8cc162c24b1b066630c398d104a9bf1edef8/damona-0.8.1.tar.gz#sha256=c8152a239dee35642179803c06b0b25147f70a5c2cba56ff144437aaa9109154 from build tracker '/tmp/pip-req-tracker-aegojaoa' 2022-01-19T17:59:45,066 Created temporary directory: /tmp/pip-unpack-y_0a5kel 2022-01-19T17:59:45,067 Building wheels for collected packages: damona 2022-01-19T17:59:45,075 Created temporary directory: /tmp/pip-wheel-_tori3mm 2022-01-19T17:59:45,076 Building wheel for damona (setup.py): started 2022-01-19T17:59:45,077 Destination directory: /tmp/pip-wheel-_tori3mm 2022-01-19T17:59:45,078 Running command /usr/bin/python3 -u -c 'import sys, setuptools, tokenize; sys.argv[0] = '"'"'/tmp/pip-wheel-3c8vz3e_/damona_8a7a16384e7d48dca54df5457a3383b4/setup.py'"'"'; __file__='"'"'/tmp/pip-wheel-3c8vz3e_/damona_8a7a16384e7d48dca54df5457a3383b4/setup.py'"'"';f=getattr(tokenize, '"'"'open'"'"', open)(__file__);code=f.read().replace('"'"'\r\n'"'"', '"'"'\n'"'"');f.close();exec(compile(code, __file__, '"'"'exec'"'"'))' bdist_wheel -d /tmp/pip-wheel-_tori3mm 2022-01-19T17:59:47,566 running bdist_wheel 2022-01-19T17:59:47,575 running build 2022-01-19T17:59:47,575 running build_py 2022-01-19T17:59:47,894 creating build 2022-01-19T17:59:47,895 creating build/lib 2022-01-19T17:59:47,897 creating build/lib/damona 2022-01-19T17:59:47,900 copying damona/builders.py -> build/lib/damona 2022-01-19T17:59:47,905 copying damona/script.py -> build/lib/damona 2022-01-19T17:59:47,912 copying damona/__init__.py -> build/lib/damona 2022-01-19T17:59:47,917 copying damona/registry.py -> build/lib/damona 2022-01-19T17:59:47,926 copying damona/common.py -> build/lib/damona 2022-01-19T17:59:47,934 copying damona/zenodo.py -> build/lib/damona 2022-01-19T17:59:47,942 copying damona/admin.py -> build/lib/damona 2022-01-19T17:59:47,948 copying damona/environ.py -> build/lib/damona 2022-01-19T17:59:47,956 copying damona/config.py -> build/lib/damona 2022-01-19T17:59:47,962 copying damona/install.py -> build/lib/damona 2022-01-19T17:59:47,973 creating build/lib/damona/software 2022-01-19T17:59:47,975 copying damona/software/__init__.py -> build/lib/damona/software 2022-01-19T17:59:47,982 creating build/lib/damona/shell 2022-01-19T17:59:47,985 copying damona/shell/__init__.py -> build/lib/damona/shell 2022-01-19T17:59:47,991 creating build/lib/damona/papers 2022-01-19T17:59:47,994 copying damona/papers/__init__.py -> build/lib/damona/papers 2022-01-19T17:59:47,999 creating build/lib/damona/biocontainers 2022-01-19T17:59:48,001 copying damona/biocontainers/__init__.py -> build/lib/damona/biocontainers 2022-01-19T17:59:48,005 creating build/lib/damona/library 2022-01-19T17:59:48,007 copying damona/library/__init__.py -> build/lib/damona/library 2022-01-19T17:59:48,012 creating build/lib/damona/shell/bash 2022-01-19T17:59:48,013 copying damona/shell/bash/__init__.py -> build/lib/damona/shell/bash 2022-01-19T17:59:48,084 creating build/lib/damona/software/art 2022-01-19T17:59:48,086 copying damona/software/art/Singularity.art_2.5.8 -> build/lib/damona/software/art 2022-01-19T17:59:48,091 copying damona/software/art/Singularity.art_3.11.14 -> build/lib/damona/software/art 2022-01-19T17:59:48,095 creating build/lib/damona/software/sequana_perl_tools 2022-01-19T17:59:48,097 copying damona/software/sequana_perl_tools/Singularity.sequana_perl_tools_0.2.0 -> build/lib/damona/software/sequana_perl_tools 2022-01-19T17:59:48,102 copying damona/software/sequana_perl_tools/Singularity.sequana_perl_tools_0.1.0 -> build/lib/damona/software/sequana_perl_tools 2022-01-19T17:59:48,109 creating build/lib/damona/software/gffread 2022-01-19T17:59:48,111 copying damona/software/gffread/Singularity.gffread_0.12.1 -> build/lib/damona/software/gffread 2022-01-19T17:59:48,118 creating build/lib/damona/software/trf 2022-01-19T17:59:48,120 copying damona/software/trf/Singularity.trf_4.10.0 -> build/lib/damona/software/trf 2022-01-19T17:59:48,127 creating build/lib/damona/software/canu 2022-01-19T17:59:48,130 copying damona/software/canu/Singularity.canu_1.6.0 -> build/lib/damona/software/canu 2022-01-19T17:59:48,137 copying damona/software/canu/Singularity.canu_1.8.0 -> build/lib/damona/software/canu 2022-01-19T17:59:48,143 creating build/lib/damona/software/sequana_tools 2022-01-19T17:59:48,146 copying damona/software/sequana_tools/Singularity.sequana_tools_0.11.0 -> build/lib/damona/software/sequana_tools 2022-01-19T17:59:48,153 copying damona/software/sequana_tools/Singularity.sequana_tools_0.9.0 -> build/lib/damona/software/sequana_tools 2022-01-19T17:59:48,160 copying damona/software/sequana_tools/Singularity.sequana_tools_0.12.0 -> build/lib/damona/software/sequana_tools 2022-01-19T17:59:48,166 copying damona/software/sequana_tools/Singularity.sequana_tools_0.10.0 -> build/lib/damona/software/sequana_tools 2022-01-19T17:59:48,173 creating build/lib/damona/software/phantompeakqualtools 2022-01-19T17:59:48,176 copying damona/software/phantompeakqualtools/Singularity.phantompeakqualtools_1.2.2 -> build/lib/damona/software/phantompeakqualtools 2022-01-19T17:59:48,183 creating build/lib/damona/software/seqtk 2022-01-19T17:59:48,185 copying damona/software/seqtk/Singularity.seqtk_1.3.0 -> build/lib/damona/software/seqtk 2022-01-19T17:59:48,192 creating build/lib/damona/software/bbtools 2022-01-19T17:59:48,194 copying damona/software/bbtools/Singularity.bbtools_38.94.0 -> build/lib/damona/software/bbtools 2022-01-19T17:59:48,201 creating build/lib/damona/software/bcl2fastq 2022-01-19T17:59:48,204 copying damona/software/bcl2fastq/Singularity.bcl2fastq_2.20.0 -> build/lib/damona/software/bcl2fastq 2022-01-19T17:59:48,210 creating build/lib/damona/software/kraken 2022-01-19T17:59:48,213 copying damona/software/kraken/Singularity.kraken_2.0.9 -> build/lib/damona/software/kraken 2022-01-19T17:59:48,220 copying damona/software/kraken/Singularity.kraken_1.1.0 -> build/lib/damona/software/kraken 2022-01-19T17:59:48,226 creating build/lib/damona/software/falco 2022-01-19T17:59:48,229 copying damona/software/falco/Singularity.falco_0.2.1 -> build/lib/damona/software/falco 2022-01-19T17:59:48,235 creating build/lib/damona/software/ucsc 2022-01-19T17:59:48,238 copying damona/software/ucsc/Singularity.ucsc_0.1.0 -> build/lib/damona/software/ucsc 2022-01-19T17:59:48,245 creating build/lib/damona/software/quast 2022-01-19T17:59:48,247 copying damona/software/quast/Singularity.quast_5.0.2 -> build/lib/damona/software/quast 2022-01-19T17:59:48,254 creating build/lib/damona/software/bowtie 2022-01-19T17:59:48,257 copying damona/software/bowtie/Singularity.bowtie_1.3.1 -> build/lib/damona/software/bowtie 2022-01-19T17:59:48,264 creating build/lib/damona/software/rtools 2022-01-19T17:59:48,266 copying damona/software/rtools/Singularity.Rtools_1.1.0 -> build/lib/damona/software/rtools 2022-01-19T17:59:48,273 copying damona/software/rtools/Singularity.Rtools_1.0.0 -> build/lib/damona/software/rtools 2022-01-19T17:59:48,279 creating build/lib/damona/software/fastqc 2022-01-19T17:59:48,282 copying damona/software/fastqc/Singularity.fastqc_0.11.8 -> build/lib/damona/software/fastqc 2022-01-19T17:59:48,288 copying damona/software/fastqc/Singularity.fastqc_0.11.9 -> build/lib/damona/software/fastqc 2022-01-19T17:59:48,295 creating build/lib/damona/software/rnadiff 2022-01-19T17:59:48,297 copying damona/software/rnadiff/Singularity.rnadiff_1.7.1 -> build/lib/damona/software/rnadiff 2022-01-19T17:59:48,304 creating build/lib/damona/software/bowtie2 2022-01-19T17:59:48,307 copying damona/software/bowtie2/Singularity.bowtie2_2.4.2 -> build/lib/damona/software/bowtie2 2022-01-19T17:59:48,312 copying damona/software/bowtie2/Singularity.bowtie2_2.3.4 -> build/lib/damona/software/bowtie2 2022-01-19T17:59:48,317 creating build/lib/damona/software/salmon 2022-01-19T17:59:48,318 copying damona/software/salmon/Singularity.salmon_1.3.0 -> build/lib/damona/software/salmon 2022-01-19T17:59:48,323 creating build/lib/damona/software/prokka 2022-01-19T17:59:48,325 copying damona/software/prokka/Singularity.prokka_1.14.5 -> build/lib/damona/software/prokka 2022-01-19T17:59:48,331 creating build/lib/damona/software/graphviz 2022-01-19T17:59:48,334 copying damona/software/graphviz/Singularity.graphviz_2.43.0 -> build/lib/damona/software/graphviz 2022-01-19T17:59:48,341 creating build/lib/damona/software/minimap2 2022-01-19T17:59:48,343 copying damona/software/minimap2/Singularity.minimap2_2.23.0 -> build/lib/damona/software/minimap2 2022-01-19T17:59:48,350 copying damona/software/minimap2/Singularity.minimap2_2.17.0 -> build/lib/damona/software/minimap2 2022-01-19T17:59:48,355 creating build/lib/damona/software/rnaseqc 2022-01-19T17:59:48,357 copying damona/software/rnaseqc/Singularity.rnaseqc_2.35.0 -> build/lib/damona/software/rnaseqc 2022-01-19T17:59:48,362 creating build/lib/damona/software/flye 2022-01-19T17:59:48,364 copying damona/software/flye/Singularity.flye_2.9.0 -> build/lib/damona/software/flye 2022-01-19T17:59:48,369 creating build/lib/damona/software/sequana 2022-01-19T17:59:48,371 copying damona/software/sequana/Singularity.sequana_0.12.6 -> build/lib/damona/software/sequana 2022-01-19T17:59:48,379 copying damona/software/art/registry.yaml -> build/lib/damona/software/art 2022-01-19T17:59:48,385 copying damona/software/sequana_perl_tools/registry.yaml -> build/lib/damona/software/sequana_perl_tools 2022-01-19T17:59:48,391 copying damona/software/gffread/registry.yaml -> build/lib/damona/software/gffread 2022-01-19T17:59:48,395 copying damona/software/trf/registry.yaml -> build/lib/damona/software/trf 2022-01-19T17:59:48,400 copying damona/software/canu/registry.yaml -> build/lib/damona/software/canu 2022-01-19T17:59:48,405 copying damona/software/sequana_tools/registry.yaml -> build/lib/damona/software/sequana_tools 2022-01-19T17:59:48,410 copying damona/software/phantompeakqualtools/registry.yaml -> build/lib/damona/software/phantompeakqualtools 2022-01-19T17:59:48,417 copying damona/software/seqtk/registry.yaml -> build/lib/damona/software/seqtk 2022-01-19T17:59:48,423 copying damona/software/bbtools/registry.yaml -> build/lib/damona/software/bbtools 2022-01-19T17:59:48,430 copying damona/software/bcl2fastq/registry.yaml -> build/lib/damona/software/bcl2fastq 2022-01-19T17:59:48,435 copying damona/software/kraken/registry.yaml -> build/lib/damona/software/kraken 2022-01-19T17:59:48,440 copying damona/software/falco/registry.yaml -> build/lib/damona/software/falco 2022-01-19T17:59:48,445 copying damona/software/ucsc/registry.yaml -> build/lib/damona/software/ucsc 2022-01-19T17:59:48,449 copying damona/software/quast/registry.yaml -> build/lib/damona/software/quast 2022-01-19T17:59:48,456 copying damona/software/bowtie/registry.yaml -> build/lib/damona/software/bowtie 2022-01-19T17:59:48,462 creating build/lib/damona/software/hisat2 2022-01-19T17:59:48,465 copying damona/software/hisat2/registry.yaml -> build/lib/damona/software/hisat2 2022-01-19T17:59:48,472 copying damona/software/rtools/registry.yaml -> build/lib/damona/software/rtools 2022-01-19T17:59:48,477 copying damona/software/fastqc/registry.yaml -> build/lib/damona/software/fastqc 2022-01-19T17:59:48,481 copying damona/software/rnadiff/registry.yaml -> build/lib/damona/software/rnadiff 2022-01-19T17:59:48,486 copying damona/software/bowtie2/registry.yaml -> build/lib/damona/software/bowtie2 2022-01-19T17:59:48,491 copying damona/software/salmon/registry.yaml -> build/lib/damona/software/salmon 2022-01-19T17:59:48,497 copying damona/software/prokka/registry.yaml -> build/lib/damona/software/prokka 2022-01-19T17:59:48,504 copying damona/software/graphviz/registry.yaml -> build/lib/damona/software/graphviz 2022-01-19T17:59:48,510 copying damona/software/minimap2/registry.yaml -> build/lib/damona/software/minimap2 2022-01-19T17:59:48,516 copying damona/software/rnaseqc/registry.yaml -> build/lib/damona/software/rnaseqc 2022-01-19T17:59:48,520 copying damona/software/flye/registry.yaml -> build/lib/damona/software/flye 2022-01-19T17:59:48,525 copying damona/software/sequana/registry.yaml -> build/lib/damona/software/sequana 2022-01-19T17:59:48,530 creating build/lib/damona/shell/fish 2022-01-19T17:59:48,532 copying damona/shell/fish/damona.fish -> build/lib/damona/shell/fish 2022-01-19T17:59:48,540 copying damona/shell/bash/damona.sh -> build/lib/damona/shell/bash 2022-01-19T17:59:48,548 copying damona/biocontainers/registry.yaml -> build/lib/damona/biocontainers 2022-01-19T17:59:48,901 creating build/lib/damona/library/R 2022-01-19T17:59:48,903 copying damona/library/R/Singularity.R_4.0.2 -> build/lib/damona/library/R 2022-01-19T17:59:48,908 copying damona/library/R/Singularity.R_3.6.3 -> build/lib/damona/library/R 2022-01-19T17:59:48,913 creating build/lib/damona/library/conda 2022-01-19T17:59:48,915 copying damona/library/conda/Singularity.conda_4.9.2 -> build/lib/damona/library/conda 2022-01-19T17:59:48,920 copying damona/library/conda/Singularity.conda_4.7.12 -> build/lib/damona/library/conda 2022-01-19T17:59:48,924 copying damona/library/R/registry.yaml -> build/lib/damona/library/R 2022-01-19T17:59:48,929 copying damona/library/conda/registry.yaml -> build/lib/damona/library/conda 2022-01-19T17:59:48,946 installing to build/bdist.linux-armv7l/wheel 2022-01-19T17:59:48,947 running install 2022-01-19T17:59:48,951 running install_lib 2022-01-19T17:59:48,962 creating build/bdist.linux-armv7l 2022-01-19T17:59:48,963 creating build/bdist.linux-armv7l/wheel 2022-01-19T17:59:48,966 creating build/bdist.linux-armv7l/wheel/damona 2022-01-19T17:59:48,968 copying build/lib/damona/builders.py -> build/bdist.linux-armv7l/wheel/damona 2022-01-19T17:59:48,976 creating build/bdist.linux-armv7l/wheel/damona/software 2022-01-19T17:59:48,979 creating build/bdist.linux-armv7l/wheel/damona/software/art 2022-01-19T17:59:48,982 copying build/lib/damona/software/art/Singularity.art_2.5.8 -> build/bdist.linux-armv7l/wheel/damona/software/art 2022-01-19T17:59:48,988 copying build/lib/damona/software/art/registry.yaml -> build/bdist.linux-armv7l/wheel/damona/software/art 2022-01-19T17:59:48,993 copying build/lib/damona/software/art/Singularity.art_3.11.14 -> build/bdist.linux-armv7l/wheel/damona/software/art 2022-01-19T17:59:48,1000 creating build/bdist.linux-armv7l/wheel/damona/software/sequana_perl_tools 2022-01-19T17:59:49,002 copying build/lib/damona/software/sequana_perl_tools/registry.yaml -> build/bdist.linux-armv7l/wheel/damona/software/sequana_perl_tools 2022-01-19T17:59:49,008 copying build/lib/damona/software/sequana_perl_tools/Singularity.sequana_perl_tools_0.2.0 -> build/bdist.linux-armv7l/wheel/damona/software/sequana_perl_tools 2022-01-19T17:59:49,013 copying build/lib/damona/software/sequana_perl_tools/Singularity.sequana_perl_tools_0.1.0 -> build/bdist.linux-armv7l/wheel/damona/software/sequana_perl_tools 2022-01-19T17:59:49,020 creating build/bdist.linux-armv7l/wheel/damona/software/gffread 2022-01-19T17:59:49,023 copying build/lib/damona/software/gffread/registry.yaml -> build/bdist.linux-armv7l/wheel/damona/software/gffread 2022-01-19T17:59:49,028 copying build/lib/damona/software/gffread/Singularity.gffread_0.12.1 -> build/bdist.linux-armv7l/wheel/damona/software/gffread 2022-01-19T17:59:49,035 creating build/bdist.linux-armv7l/wheel/damona/software/trf 2022-01-19T17:59:49,037 copying build/lib/damona/software/trf/registry.yaml -> build/bdist.linux-armv7l/wheel/damona/software/trf 2022-01-19T17:59:49,042 copying build/lib/damona/software/trf/Singularity.trf_4.10.0 -> build/bdist.linux-armv7l/wheel/damona/software/trf 2022-01-19T17:59:49,047 creating build/bdist.linux-armv7l/wheel/damona/software/canu 2022-01-19T17:59:49,049 copying build/lib/damona/software/canu/Singularity.canu_1.6.0 -> build/bdist.linux-armv7l/wheel/damona/software/canu 2022-01-19T17:59:49,053 copying build/lib/damona/software/canu/Singularity.canu_1.8.0 -> build/bdist.linux-armv7l/wheel/damona/software/canu 2022-01-19T17:59:49,057 copying build/lib/damona/software/canu/registry.yaml -> build/bdist.linux-armv7l/wheel/damona/software/canu 2022-01-19T17:59:49,062 copying build/lib/damona/software/__init__.py -> build/bdist.linux-armv7l/wheel/damona/software 2022-01-19T17:59:49,068 creating build/bdist.linux-armv7l/wheel/damona/software/sequana_tools 2022-01-19T17:59:49,070 copying build/lib/damona/software/sequana_tools/Singularity.sequana_tools_0.11.0 -> build/bdist.linux-armv7l/wheel/damona/software/sequana_tools 2022-01-19T17:59:49,076 copying build/lib/damona/software/sequana_tools/Singularity.sequana_tools_0.9.0 -> build/bdist.linux-armv7l/wheel/damona/software/sequana_tools 2022-01-19T17:59:49,082 copying build/lib/damona/software/sequana_tools/Singularity.sequana_tools_0.12.0 -> build/bdist.linux-armv7l/wheel/damona/software/sequana_tools 2022-01-19T17:59:49,087 copying build/lib/damona/software/sequana_tools/registry.yaml -> build/bdist.linux-armv7l/wheel/damona/software/sequana_tools 2022-01-19T17:59:49,093 copying build/lib/damona/software/sequana_tools/Singularity.sequana_tools_0.10.0 -> build/bdist.linux-armv7l/wheel/damona/software/sequana_tools 2022-01-19T17:59:49,100 creating build/bdist.linux-armv7l/wheel/damona/software/phantompeakqualtools 2022-01-19T17:59:49,102 copying build/lib/damona/software/phantompeakqualtools/registry.yaml -> build/bdist.linux-armv7l/wheel/damona/software/phantompeakqualtools 2022-01-19T17:59:49,108 copying build/lib/damona/software/phantompeakqualtools/Singularity.phantompeakqualtools_1.2.2 -> build/bdist.linux-armv7l/wheel/damona/software/phantompeakqualtools 2022-01-19T17:59:49,115 creating build/bdist.linux-armv7l/wheel/damona/software/seqtk 2022-01-19T17:59:49,117 copying build/lib/damona/software/seqtk/Singularity.seqtk_1.3.0 -> build/bdist.linux-armv7l/wheel/damona/software/seqtk 2022-01-19T17:59:49,122 copying build/lib/damona/software/seqtk/registry.yaml -> build/bdist.linux-armv7l/wheel/damona/software/seqtk 2022-01-19T17:59:49,127 creating build/bdist.linux-armv7l/wheel/damona/software/bbtools 2022-01-19T17:59:49,129 copying build/lib/damona/software/bbtools/registry.yaml -> build/bdist.linux-armv7l/wheel/damona/software/bbtools 2022-01-19T17:59:49,133 copying build/lib/damona/software/bbtools/Singularity.bbtools_38.94.0 -> build/bdist.linux-armv7l/wheel/damona/software/bbtools 2022-01-19T17:59:49,138 creating build/bdist.linux-armv7l/wheel/damona/software/bcl2fastq 2022-01-19T17:59:49,140 copying build/lib/damona/software/bcl2fastq/registry.yaml -> build/bdist.linux-armv7l/wheel/damona/software/bcl2fastq 2022-01-19T17:59:49,146 copying build/lib/damona/software/bcl2fastq/Singularity.bcl2fastq_2.20.0 -> build/bdist.linux-armv7l/wheel/damona/software/bcl2fastq 2022-01-19T17:59:49,153 creating build/bdist.linux-armv7l/wheel/damona/software/kraken 2022-01-19T17:59:49,155 copying build/lib/damona/software/kraken/registry.yaml -> build/bdist.linux-armv7l/wheel/damona/software/kraken 2022-01-19T17:59:49,161 copying build/lib/damona/software/kraken/Singularity.kraken_2.0.9 -> build/bdist.linux-armv7l/wheel/damona/software/kraken 2022-01-19T17:59:49,167 copying build/lib/damona/software/kraken/Singularity.kraken_1.1.0 -> build/bdist.linux-armv7l/wheel/damona/software/kraken 2022-01-19T17:59:49,173 creating build/bdist.linux-armv7l/wheel/damona/software/falco 2022-01-19T17:59:49,176 copying build/lib/damona/software/falco/Singularity.falco_0.2.1 -> build/bdist.linux-armv7l/wheel/damona/software/falco 2022-01-19T17:59:49,182 copying build/lib/damona/software/falco/registry.yaml -> build/bdist.linux-armv7l/wheel/damona/software/falco 2022-01-19T17:59:49,188 creating build/bdist.linux-armv7l/wheel/damona/software/ucsc 2022-01-19T17:59:49,191 copying build/lib/damona/software/ucsc/registry.yaml -> build/bdist.linux-armv7l/wheel/damona/software/ucsc 2022-01-19T17:59:49,197 copying build/lib/damona/software/ucsc/Singularity.ucsc_0.1.0 -> build/bdist.linux-armv7l/wheel/damona/software/ucsc 2022-01-19T17:59:49,204 creating build/bdist.linux-armv7l/wheel/damona/software/quast 2022-01-19T17:59:49,206 copying build/lib/damona/software/quast/Singularity.quast_5.0.2 -> build/bdist.linux-armv7l/wheel/damona/software/quast 2022-01-19T17:59:49,212 copying build/lib/damona/software/quast/registry.yaml -> build/bdist.linux-armv7l/wheel/damona/software/quast 2022-01-19T17:59:49,219 creating build/bdist.linux-armv7l/wheel/damona/software/bowtie 2022-01-19T17:59:49,222 copying build/lib/damona/software/bowtie/registry.yaml -> build/bdist.linux-armv7l/wheel/damona/software/bowtie 2022-01-19T17:59:49,227 copying build/lib/damona/software/bowtie/Singularity.bowtie_1.3.1 -> build/bdist.linux-armv7l/wheel/damona/software/bowtie 2022-01-19T17:59:49,232 creating build/bdist.linux-armv7l/wheel/damona/software/hisat2 2022-01-19T17:59:49,234 copying build/lib/damona/software/hisat2/registry.yaml -> build/bdist.linux-armv7l/wheel/damona/software/hisat2 2022-01-19T17:59:49,239 creating build/bdist.linux-armv7l/wheel/damona/software/rtools 2022-01-19T17:59:49,241 copying build/lib/damona/software/rtools/Singularity.Rtools_1.1.0 -> build/bdist.linux-armv7l/wheel/damona/software/rtools 2022-01-19T17:59:49,246 copying build/lib/damona/software/rtools/registry.yaml -> build/bdist.linux-armv7l/wheel/damona/software/rtools 2022-01-19T17:59:49,251 copying build/lib/damona/software/rtools/Singularity.Rtools_1.0.0 -> build/bdist.linux-armv7l/wheel/damona/software/rtools 2022-01-19T17:59:49,258 creating build/bdist.linux-armv7l/wheel/damona/software/fastqc 2022-01-19T17:59:49,261 copying build/lib/damona/software/fastqc/registry.yaml -> build/bdist.linux-armv7l/wheel/damona/software/fastqc 2022-01-19T17:59:49,267 copying build/lib/damona/software/fastqc/Singularity.fastqc_0.11.8 -> build/bdist.linux-armv7l/wheel/damona/software/fastqc 2022-01-19T17:59:49,272 copying build/lib/damona/software/fastqc/Singularity.fastqc_0.11.9 -> build/bdist.linux-armv7l/wheel/damona/software/fastqc 2022-01-19T17:59:49,279 creating build/bdist.linux-armv7l/wheel/damona/software/rnadiff 2022-01-19T17:59:49,281 copying build/lib/damona/software/rnadiff/registry.yaml -> build/bdist.linux-armv7l/wheel/damona/software/rnadiff 2022-01-19T17:59:49,287 copying build/lib/damona/software/rnadiff/Singularity.rnadiff_1.7.1 -> build/bdist.linux-armv7l/wheel/damona/software/rnadiff 2022-01-19T17:59:49,295 creating build/bdist.linux-armv7l/wheel/damona/software/bowtie2 2022-01-19T17:59:49,297 copying build/lib/damona/software/bowtie2/Singularity.bowtie2_2.4.2 -> build/bdist.linux-armv7l/wheel/damona/software/bowtie2 2022-01-19T17:59:49,303 copying build/lib/damona/software/bowtie2/Singularity.bowtie2_2.3.4 -> build/bdist.linux-armv7l/wheel/damona/software/bowtie2 2022-01-19T17:59:49,308 copying build/lib/damona/software/bowtie2/registry.yaml -> build/bdist.linux-armv7l/wheel/damona/software/bowtie2 2022-01-19T17:59:49,315 creating build/bdist.linux-armv7l/wheel/damona/software/salmon 2022-01-19T17:59:49,318 copying build/lib/damona/software/salmon/Singularity.salmon_1.3.0 -> build/bdist.linux-armv7l/wheel/damona/software/salmon 2022-01-19T17:59:49,324 copying build/lib/damona/software/salmon/registry.yaml -> build/bdist.linux-armv7l/wheel/damona/software/salmon 2022-01-19T17:59:49,331 creating build/bdist.linux-armv7l/wheel/damona/software/prokka 2022-01-19T17:59:49,333 copying build/lib/damona/software/prokka/registry.yaml -> build/bdist.linux-armv7l/wheel/damona/software/prokka 2022-01-19T17:59:49,339 copying build/lib/damona/software/prokka/Singularity.prokka_1.14.5 -> build/bdist.linux-armv7l/wheel/damona/software/prokka 2022-01-19T17:59:49,346 creating build/bdist.linux-armv7l/wheel/damona/software/graphviz 2022-01-19T17:59:49,348 copying build/lib/damona/software/graphviz/Singularity.graphviz_2.43.0 -> build/bdist.linux-armv7l/wheel/damona/software/graphviz 2022-01-19T17:59:49,354 copying build/lib/damona/software/graphviz/registry.yaml -> build/bdist.linux-armv7l/wheel/damona/software/graphviz 2022-01-19T17:59:49,361 creating build/bdist.linux-armv7l/wheel/damona/software/minimap2 2022-01-19T17:59:49,363 copying build/lib/damona/software/minimap2/Singularity.minimap2_2.23.0 -> build/bdist.linux-armv7l/wheel/damona/software/minimap2 2022-01-19T17:59:49,368 copying build/lib/damona/software/minimap2/registry.yaml -> build/bdist.linux-armv7l/wheel/damona/software/minimap2 2022-01-19T17:59:49,372 copying build/lib/damona/software/minimap2/Singularity.minimap2_2.17.0 -> build/bdist.linux-armv7l/wheel/damona/software/minimap2 2022-01-19T17:59:49,377 creating build/bdist.linux-armv7l/wheel/damona/software/rnaseqc 2022-01-19T17:59:49,379 copying build/lib/damona/software/rnaseqc/registry.yaml -> build/bdist.linux-armv7l/wheel/damona/software/rnaseqc 2022-01-19T17:59:49,383 copying build/lib/damona/software/rnaseqc/Singularity.rnaseqc_2.35.0 -> build/bdist.linux-armv7l/wheel/damona/software/rnaseqc 2022-01-19T17:59:49,389 creating build/bdist.linux-armv7l/wheel/damona/software/flye 2022-01-19T17:59:49,392 copying build/lib/damona/software/flye/registry.yaml -> build/bdist.linux-armv7l/wheel/damona/software/flye 2022-01-19T17:59:49,398 copying build/lib/damona/software/flye/Singularity.flye_2.9.0 -> build/bdist.linux-armv7l/wheel/damona/software/flye 2022-01-19T17:59:49,405 creating build/bdist.linux-armv7l/wheel/damona/software/sequana 2022-01-19T17:59:49,408 copying build/lib/damona/software/sequana/Singularity.sequana_0.12.6 -> build/bdist.linux-armv7l/wheel/damona/software/sequana 2022-01-19T17:59:49,414 copying build/lib/damona/software/sequana/registry.yaml -> build/bdist.linux-armv7l/wheel/damona/software/sequana 2022-01-19T17:59:49,419 copying build/lib/damona/script.py -> build/bdist.linux-armv7l/wheel/damona 2022-01-19T17:59:49,428 copying build/lib/damona/__init__.py -> build/bdist.linux-armv7l/wheel/damona 2022-01-19T17:59:49,433 copying build/lib/damona/registry.py -> build/bdist.linux-armv7l/wheel/damona 2022-01-19T17:59:49,441 copying build/lib/damona/common.py -> build/bdist.linux-armv7l/wheel/damona 2022-01-19T17:59:49,448 copying build/lib/damona/zenodo.py -> build/bdist.linux-armv7l/wheel/damona 2022-01-19T17:59:49,456 copying build/lib/damona/admin.py -> build/bdist.linux-armv7l/wheel/damona 2022-01-19T17:59:49,461 copying build/lib/damona/environ.py -> build/bdist.linux-armv7l/wheel/damona 2022-01-19T17:59:49,470 creating build/bdist.linux-armv7l/wheel/damona/shell 2022-01-19T17:59:49,474 creating build/bdist.linux-armv7l/wheel/damona/shell/fish 2022-01-19T17:59:49,477 copying build/lib/damona/shell/fish/damona.fish -> build/bdist.linux-armv7l/wheel/damona/shell/fish 2022-01-19T17:59:49,486 creating build/bdist.linux-armv7l/wheel/damona/shell/bash 2022-01-19T17:59:49,488 copying build/lib/damona/shell/bash/__init__.py -> build/bdist.linux-armv7l/wheel/damona/shell/bash 2022-01-19T17:59:49,493 copying build/lib/damona/shell/bash/damona.sh -> build/bdist.linux-armv7l/wheel/damona/shell/bash 2022-01-19T17:59:49,500 copying build/lib/damona/shell/__init__.py -> build/bdist.linux-armv7l/wheel/damona/shell 2022-01-19T17:59:49,506 creating build/bdist.linux-armv7l/wheel/damona/papers 2022-01-19T17:59:49,508 copying build/lib/damona/papers/__init__.py -> build/bdist.linux-armv7l/wheel/damona/papers 2022-01-19T17:59:49,514 copying build/lib/damona/config.py -> build/bdist.linux-armv7l/wheel/damona 2022-01-19T17:59:49,520 copying build/lib/damona/install.py -> build/bdist.linux-armv7l/wheel/damona 2022-01-19T17:59:49,530 creating build/bdist.linux-armv7l/wheel/damona/biocontainers 2022-01-19T17:59:49,533 copying build/lib/damona/biocontainers/__init__.py -> build/bdist.linux-armv7l/wheel/damona/biocontainers 2022-01-19T17:59:49,538 copying build/lib/damona/biocontainers/registry.yaml -> build/bdist.linux-armv7l/wheel/damona/biocontainers 2022-01-19T17:59:49,899 creating build/bdist.linux-armv7l/wheel/damona/library 2022-01-19T17:59:49,903 creating build/bdist.linux-armv7l/wheel/damona/library/R 2022-01-19T17:59:49,906 copying build/lib/damona/library/R/registry.yaml -> build/bdist.linux-armv7l/wheel/damona/library/R 2022-01-19T17:59:49,912 copying build/lib/damona/library/R/Singularity.R_4.0.2 -> build/bdist.linux-armv7l/wheel/damona/library/R 2022-01-19T17:59:49,917 copying build/lib/damona/library/R/Singularity.R_3.6.3 -> build/bdist.linux-armv7l/wheel/damona/library/R 2022-01-19T17:59:49,924 creating build/bdist.linux-armv7l/wheel/damona/library/conda 2022-01-19T17:59:49,927 copying build/lib/damona/library/conda/registry.yaml -> build/bdist.linux-armv7l/wheel/damona/library/conda 2022-01-19T17:59:49,933 copying build/lib/damona/library/conda/Singularity.conda_4.9.2 -> build/bdist.linux-armv7l/wheel/damona/library/conda 2022-01-19T17:59:49,938 copying build/lib/damona/library/conda/Singularity.conda_4.7.12 -> build/bdist.linux-armv7l/wheel/damona/library/conda 2022-01-19T17:59:49,944 copying build/lib/damona/library/__init__.py -> build/bdist.linux-armv7l/wheel/damona/library 2022-01-19T17:59:49,948 running install_egg_info 2022-01-19T17:59:49,963 running egg_info 2022-01-19T17:59:49,964 writing requirements to damona.egg-info/requires.txt 2022-01-19T17:59:49,967 writing damona.egg-info/PKG-INFO 2022-01-19T17:59:49,974 writing top-level names to damona.egg-info/top_level.txt 2022-01-19T17:59:49,977 writing entry points to damona.egg-info/entry_points.txt 2022-01-19T17:59:49,979 writing dependency_links to damona.egg-info/dependency_links.txt 2022-01-19T17:59:49,998 reading manifest file 'damona.egg-info/SOURCES.txt' 2022-01-19T17:59:50,007 reading manifest template 'MANIFEST.in' 2022-01-19T17:59:50,010 warning: no previously-included files matching '__pycache__' found under directory '*' 2022-01-19T17:59:50,013 warning: no previously-included files matching '*pyc' found under directory '*' 2022-01-19T17:59:50,015 warning: no previously-included files matching 'test' found under directory '*' 2022-01-19T17:59:50,018 warning: no files found matching '.requirements_dev.txt' 2022-01-19T17:59:50,019 warning: no files found matching 'damona/shell/*.sh' 2022-01-19T17:59:50,021 no previously-included directories found matching 'test' 2022-01-19T17:59:50,022 no previously-included directories found matching 'doc' 2022-01-19T17:59:50,040 writing manifest file 'damona.egg-info/SOURCES.txt' 2022-01-19T17:59:50,043 Copying damona.egg-info to build/bdist.linux-armv7l/wheel/damona-0.8.1-py3.5.egg-info 2022-01-19T17:59:50,081 running install_scripts 2022-01-19T17:59:50,225 creating build/bdist.linux-armv7l/wheel/damona-0.8.1.dist-info/WHEEL 2022-01-19T17:59:51,403 Building wheel for damona (setup.py): finished with status 'done' 2022-01-19T17:59:51,415 Created wheel for damona: filename=damona-0.8.1-py3-none-any.whl size=481889 sha256=1876dc816c6b55bdd4e26c3d55f550985eaaece2dd0b51e91198fcb9e23a6bce 2022-01-19T17:59:51,416 Stored in directory: /tmp/pip-ephem-wheel-cache-0fi5payy/wheels/72/97/44/7e8d5bc3c5c2cfc5770fba5cc0da4f2d309d4d60f214dcd9b1 2022-01-19T17:59:51,445 Successfully built damona 2022-01-19T17:59:51,533 Removed build tracker: '/tmp/pip-req-tracker-aegojaoa'