2022-01-20T21:05:35,242 Created temporary directory: /tmp/pip-ephem-wheel-cache-4e2f8qrc 2022-01-20T21:05:35,248 Created temporary directory: /tmp/pip-req-tracker-6kxj8exx 2022-01-20T21:05:35,249 Initialized build tracking at /tmp/pip-req-tracker-6kxj8exx 2022-01-20T21:05:35,249 Created build tracker: /tmp/pip-req-tracker-6kxj8exx 2022-01-20T21:05:35,250 Entered build tracker: /tmp/pip-req-tracker-6kxj8exx 2022-01-20T21:05:35,251 Created temporary directory: /tmp/pip-wheel-kndkm34k 2022-01-20T21:05:35,323 Looking in indexes: https://pypi.org/simple, https://www.piwheels.org/simple 2022-01-20T21:05:35,328 2 location(s) to search for versions of microhapdb: 2022-01-20T21:05:35,328 * https://pypi.org/simple/microhapdb/ 2022-01-20T21:05:35,328 * https://www.piwheels.org/simple/microhapdb/ 2022-01-20T21:05:35,330 Fetching project page and analyzing links: https://pypi.org/simple/microhapdb/ 2022-01-20T21:05:35,331 Getting page https://pypi.org/simple/microhapdb/ 2022-01-20T21:05:35,334 Found index url https://pypi.org/simple 2022-01-20T21:05:35,536 Found link https://files.pythonhosted.org/packages/ee/b9/90172ce0bd8dc37c5526c0674e88001a1c8dbc79067b860e4ac6b306ecf3/microhapdb-0.1.0.tar.gz#sha256=aaf41f6fd9078d5d229bb9e5de920842d2e12432a261755a04fc55cc1dff023f (from https://pypi.org/simple/microhapdb/), version: 0.1.0 2022-01-20T21:05:35,537 Found link https://files.pythonhosted.org/packages/aa/72/2afb13e19bd12c8b2f01c4bf90765e286d187c9f8bdda7023018d30cdb2e/microhapdb-0.1.1.tar.gz#sha256=c22e45f181094c54d1370c3ea0cb65f57d3d889a0fb87a76def67d5e50d4cc08 (from https://pypi.org/simple/microhapdb/), version: 0.1.1 2022-01-20T21:05:35,538 Found link https://files.pythonhosted.org/packages/1a/17/225f5ce31fdad8554b08a97c7777ed210156768868b3be7b82d85dff86d3/microhapdb-0.1.2.tar.gz#sha256=03e4ca5820741e67f04f85d777a7acd331640cbb4dd7dec56b22aecdb4676b70 (from https://pypi.org/simple/microhapdb/), version: 0.1.2 2022-01-20T21:05:35,539 Found link https://files.pythonhosted.org/packages/79/93/42989a5c94cff6e2be24185e240319ad7bd1402858d944efa81e52ae3e5a/microhapdb-0.2.tar.gz#sha256=5d65dfc9eb53079076da7efadc9d0f5d32ffd3df88674c1bad70b36ca3b8d9e8 (from https://pypi.org/simple/microhapdb/), version: 0.2 2022-01-20T21:05:35,540 Found link https://files.pythonhosted.org/packages/50/45/d65815c6c175568cf697302430ebf30bf5dab5f224c218c94e1e663af338/microhapdb-0.4.tar.gz#sha256=e7468af01da9307b0f3d0520b5a98464d61384c7752e86b4ca0ad83284be4f71 (from https://pypi.org/simple/microhapdb/), version: 0.4 2022-01-20T21:05:35,541 Found link https://files.pythonhosted.org/packages/f8/37/a2430a19c7329b2f7b6c448f6f77f2856cdeb2a96ef28cf2ac252f010bee/microhapdb-0.4.1.tar.gz#sha256=252170ba75aa1365b607b1906e8eee3e5337c0b1cfa9fff5c730fed30047e511 (from https://pypi.org/simple/microhapdb/), version: 0.4.1 2022-01-20T21:05:35,541 Found link https://files.pythonhosted.org/packages/df/d3/2e76b9ddd603a07ec37966e91dc1a01ca6207a5b51e90e8b59010d3bd2db/microhapdb-0.4.3.tar.gz#sha256=064b325cc286e0081746ec672ca694fc1ee1cf0008dc8e1ffcee531fcbc35698 (from https://pypi.org/simple/microhapdb/), version: 0.4.3 2022-01-20T21:05:35,542 Found link https://files.pythonhosted.org/packages/87/8d/6680f68c36ab955b2ea417ddd235181fa4dec042a89dff156b693ccc4632/microhapdb-0.7rc1.tar.gz#sha256=c92155cb5af810ac9a9d3b7b42c74669802f92f3a443de18fa32fef48a745f52 (from https://pypi.org/simple/microhapdb/), version: 0.7rc1 2022-01-20T21:05:35,543 Found link https://files.pythonhosted.org/packages/2a/d8/af81dbd145449f53f85ef8e7b566c37a1404cbf04e96c57eafdc3eab3416/microhapdb-0.7.tar.gz#sha256=24535bfcd6903d2025b6000fb87bbbfa8da25d2344396c23467abc84e361b49b (from https://pypi.org/simple/microhapdb/), version: 0.7 2022-01-20T21:05:35,544 Fetching project page and analyzing links: https://www.piwheels.org/simple/microhapdb/ 2022-01-20T21:05:35,544 Getting page https://www.piwheels.org/simple/microhapdb/ 2022-01-20T21:05:35,546 Found index url https://www.piwheels.org/simple 2022-01-20T21:05:35,775 Skipping link: No binaries permitted for microhapdb: https://www.piwheels.org/simple/microhapdb/microhapdb-0.1.0-py3-none-any.whl#sha256=8dca684951b11e03b1b1b391060c778c4011e80153ce3f4d3f23645de5421f0b (from https://www.piwheels.org/simple/microhapdb/) 2022-01-20T21:05:35,776 Skipping link: No binaries permitted for microhapdb: https://www.piwheels.org/simple/microhapdb/microhapdb-0.1.1-py3-none-any.whl#sha256=a624754af6799a07ec6f8ff071b813408eb663a9e0540f7eb5a409cc8298c74d (from https://www.piwheels.org/simple/microhapdb/) 2022-01-20T21:05:35,776 Skipping link: No binaries permitted for microhapdb: https://www.piwheels.org/simple/microhapdb/microhapdb-0.1.2-py3-none-any.whl#sha256=bc4af643ad1cc8004d29be98c89dca8079570732c2d928212c3c29e2c5e7c628 (from https://www.piwheels.org/simple/microhapdb/) 2022-01-20T21:05:35,777 Skipping link: No binaries permitted for microhapdb: https://www.piwheels.org/simple/microhapdb/microhapdb-0.2-py3-none-any.whl#sha256=c418728a24013838b304b761cb75b3570bc65edc0ce9885d0d5d9d2d1ace8cb4 (from https://www.piwheels.org/simple/microhapdb/) 2022-01-20T21:05:35,777 Skipping link: No binaries permitted for microhapdb: https://www.piwheels.org/simple/microhapdb/microhapdb-0.4-py3-none-any.whl#sha256=88c02e5b9587d96de30d2c84c6b1dfd5a2a700fb622acadaf8dbe1d9bc06471e (from https://www.piwheels.org/simple/microhapdb/) 2022-01-20T21:05:35,778 Skipping link: No binaries permitted for microhapdb: https://www.piwheels.org/simple/microhapdb/microhapdb-0.4.1-py3-none-any.whl#sha256=a92f6453b9b18d3582c80d6aff80ea2c17a08bd7642c7c09cb410424f83c5d47 (from https://www.piwheels.org/simple/microhapdb/) 2022-01-20T21:05:35,778 Skipping link: No binaries permitted for microhapdb: https://www.piwheels.org/simple/microhapdb/microhapdb-0.4.3-py3-none-any.whl#sha256=7d8040588f572616f753f06cb829ad8f002a267a2656cbc6e7e09b466d6f52df (from https://www.piwheels.org/simple/microhapdb/) 2022-01-20T21:05:35,779 Skipping link: not a file: https://www.piwheels.org/simple/microhapdb/ 2022-01-20T21:05:35,779 Skipping link: not a file: https://pypi.org/simple/microhapdb/ 2022-01-20T21:05:35,816 Given no hashes to check 1 links for project 'microhapdb': discarding no candidates 2022-01-20T21:05:35,847 Collecting microhapdb==0.7rc1 2022-01-20T21:05:35,850 Created temporary directory: /tmp/pip-unpack-zqahr3q9 2022-01-20T21:05:35,941 Downloading microhapdb-0.7rc1.tar.gz (929 kB) 2022-01-20T21:05:36,933 Added microhapdb==0.7rc1 from https://files.pythonhosted.org/packages/87/8d/6680f68c36ab955b2ea417ddd235181fa4dec042a89dff156b693ccc4632/microhapdb-0.7rc1.tar.gz#sha256=c92155cb5af810ac9a9d3b7b42c74669802f92f3a443de18fa32fef48a745f52 to build tracker '/tmp/pip-req-tracker-6kxj8exx' 2022-01-20T21:05:36,934 Running setup.py (path:/tmp/pip-wheel-kndkm34k/microhapdb_6578d875d8a64225a4018b7658b46c37/setup.py) egg_info for package microhapdb 2022-01-20T21:05:36,936 Created temporary directory: /tmp/pip-pip-egg-info-jtbpkag9 2022-01-20T21:05:36,936 Preparing metadata (setup.py): started 2022-01-20T21:05:36,937 Running command python setup.py egg_info 2022-01-20T21:05:38,936 running egg_info 2022-01-20T21:05:38,940 creating /tmp/pip-pip-egg-info-jtbpkag9/microhapdb.egg-info 2022-01-20T21:05:38,957 writing manifest file '/tmp/pip-pip-egg-info-jtbpkag9/microhapdb.egg-info/SOURCES.txt' 2022-01-20T21:05:38,971 /usr/local/lib/python3.7/dist-packages/setuptools/dist.py:493: UserWarning: Normalizing '0.7-rc.1' to '0.7rc1' 2022-01-20T21:05:38,972 warnings.warn(tmpl.format(**locals())) 2022-01-20T21:05:38,972 package init file 'microhapdb/tests/__init__.py' not found (or not a regular file) 2022-01-20T21:05:38,993 writing manifest file '/tmp/pip-pip-egg-info-jtbpkag9/microhapdb.egg-info/SOURCES.txt' 2022-01-20T21:05:39,121 Preparing metadata (setup.py): finished with status 'done' 2022-01-20T21:05:39,131 Source in /tmp/pip-wheel-kndkm34k/microhapdb_6578d875d8a64225a4018b7658b46c37 has version 0.7rc1, which satisfies requirement microhapdb==0.7rc1 from https://files.pythonhosted.org/packages/87/8d/6680f68c36ab955b2ea417ddd235181fa4dec042a89dff156b693ccc4632/microhapdb-0.7rc1.tar.gz#sha256=c92155cb5af810ac9a9d3b7b42c74669802f92f3a443de18fa32fef48a745f52 2022-01-20T21:05:39,133 Removed microhapdb==0.7rc1 from https://files.pythonhosted.org/packages/87/8d/6680f68c36ab955b2ea417ddd235181fa4dec042a89dff156b693ccc4632/microhapdb-0.7rc1.tar.gz#sha256=c92155cb5af810ac9a9d3b7b42c74669802f92f3a443de18fa32fef48a745f52 from build tracker '/tmp/pip-req-tracker-6kxj8exx' 2022-01-20T21:05:39,144 Created temporary directory: /tmp/pip-unpack-t8l6nldh 2022-01-20T21:05:39,146 Building wheels for collected packages: microhapdb 2022-01-20T21:05:39,156 Created temporary directory: /tmp/pip-wheel-oz_wdvjm 2022-01-20T21:05:39,157 Building wheel for microhapdb (setup.py): started 2022-01-20T21:05:39,157 Destination directory: /tmp/pip-wheel-oz_wdvjm 2022-01-20T21:05:39,158 Running command /usr/bin/python3 -u -c 'import io, os, sys, setuptools, tokenize; sys.argv[0] = '"'"'/tmp/pip-wheel-kndkm34k/microhapdb_6578d875d8a64225a4018b7658b46c37/setup.py'"'"'; __file__='"'"'/tmp/pip-wheel-kndkm34k/microhapdb_6578d875d8a64225a4018b7658b46c37/setup.py'"'"';f = getattr(tokenize, '"'"'open'"'"', open)(__file__) if os.path.exists(__file__) else io.StringIO('"'"'from setuptools import setup; setup()'"'"');code = f.read().replace('"'"'\r\n'"'"', '"'"'\n'"'"');f.close();exec(compile(code, __file__, '"'"'exec'"'"'))' bdist_wheel -d /tmp/pip-wheel-oz_wdvjm 2022-01-20T21:05:41,034 /usr/local/lib/python3.7/dist-packages/setuptools/dist.py:493: UserWarning: Normalizing '0.7-rc.1' to '0.7rc1' 2022-01-20T21:05:41,036 warnings.warn(tmpl.format(**locals())) 2022-01-20T21:05:41,121 running bdist_wheel 2022-01-20T21:05:41,130 running build 2022-01-20T21:05:41,131 running build_py 2022-01-20T21:05:41,142 creating build 2022-01-20T21:05:41,143 creating build/lib 2022-01-20T21:05:41,144 creating build/lib/microhapdb 2022-01-20T21:05:41,146 copying microhapdb/__init__.py -> build/lib/microhapdb 2022-01-20T21:05:41,149 copying microhapdb/retrieve.py -> build/lib/microhapdb 2022-01-20T21:05:41,153 copying microhapdb/population.py -> build/lib/microhapdb 2022-01-20T21:05:41,156 copying microhapdb/panel.py -> build/lib/microhapdb 2022-01-20T21:05:41,160 copying microhapdb/conftest.py -> build/lib/microhapdb 2022-01-20T21:05:41,163 copying microhapdb/_version.py -> build/lib/microhapdb 2022-01-20T21:05:41,166 copying microhapdb/marker.py -> build/lib/microhapdb 2022-01-20T21:05:41,170 copying microhapdb/util.py -> build/lib/microhapdb 2022-01-20T21:05:41,175 creating build/lib/microhapdb/cli 2022-01-20T21:05:41,176 copying microhapdb/cli/__init__.py -> build/lib/microhapdb/cli 2022-01-20T21:05:41,180 copying microhapdb/cli/lookup.py -> build/lib/microhapdb/cli 2022-01-20T21:05:41,183 copying microhapdb/cli/population.py -> build/lib/microhapdb/cli 2022-01-20T21:05:41,186 copying microhapdb/cli/frequency.py -> build/lib/microhapdb/cli 2022-01-20T21:05:41,190 copying microhapdb/cli/marker.py -> build/lib/microhapdb/cli 2022-01-20T21:05:41,193 package init file 'microhapdb/tests/__init__.py' not found (or not a regular file) 2022-01-20T21:05:41,195 creating build/lib/microhapdb/tests 2022-01-20T21:05:41,196 copying microhapdb/tests/test_retrieve.py -> build/lib/microhapdb/tests 2022-01-20T21:05:41,200 copying microhapdb/tests/test_population.py -> build/lib/microhapdb/tests 2022-01-20T21:05:41,204 copying microhapdb/tests/test_frequency.py -> build/lib/microhapdb/tests 2022-01-20T21:05:41,208 copying microhapdb/tests/test_marker.py -> build/lib/microhapdb/tests 2022-01-20T21:05:41,213 copying microhapdb/tests/test_cli.py -> build/lib/microhapdb/tests 2022-01-20T21:05:41,218 running egg_info 2022-01-20T21:05:41,279 writing manifest file 'microhapdb.egg-info/SOURCES.txt' 2022-01-20T21:05:41,285 creating build/lib/microhapdb/data 2022-01-20T21:05:41,287 copying microhapdb/data/frequency.tsv -> build/lib/microhapdb/data 2022-01-20T21:05:41,470 copying microhapdb/data/idmap.tsv -> build/lib/microhapdb/data 2022-01-20T21:05:41,475 copying microhapdb/data/indels.tsv -> build/lib/microhapdb/data 2022-01-20T21:05:41,478 copying microhapdb/data/marker-aes.tsv -> build/lib/microhapdb/data 2022-01-20T21:05:41,495 copying microhapdb/data/marker-offsets-GRCh37.tsv -> build/lib/microhapdb/data 2022-01-20T21:05:41,500 copying microhapdb/data/marker.tsv -> build/lib/microhapdb/data 2022-01-20T21:05:41,507 copying microhapdb/data/population.tsv -> build/lib/microhapdb/data 2022-01-20T21:05:41,511 copying microhapdb/data/sequences.tsv -> build/lib/microhapdb/data 2022-01-20T21:05:41,546 copying microhapdb/data/variantmap.tsv -> build/lib/microhapdb/data 2022-01-20T21:05:41,555 creating build/lib/microhapdb/data/tests 2022-01-20T21:05:41,556 copying microhapdb/data/tests/panel-alpha.fasta -> build/lib/microhapdb/data/tests 2022-01-20T21:05:41,560 copying microhapdb/data/tests/panel-beta.fasta -> build/lib/microhapdb/data/tests 2022-01-20T21:05:41,570 UPDATING build/lib/microhapdb/_version.py 2022-01-20T21:05:41,572 set build/lib/microhapdb/_version.py to '0.7-rc.1' 2022-01-20T21:05:41,582 /usr/local/lib/python3.7/dist-packages/setuptools/command/install.py:37: SetuptoolsDeprecationWarning: setup.py install is deprecated. Use build and pip and other standards-based tools. 2022-01-20T21:05:41,582 setuptools.SetuptoolsDeprecationWarning, 2022-01-20T21:05:41,586 running install 2022-01-20T21:05:41,649 running install_lib 2022-01-20T21:05:41,655 creating build/bdist.linux-armv7l 2022-01-20T21:05:41,656 creating build/bdist.linux-armv7l/wheel 2022-01-20T21:05:41,659 creating build/bdist.linux-armv7l/wheel/microhapdb 2022-01-20T21:05:41,662 creating build/bdist.linux-armv7l/wheel/microhapdb/data 2022-01-20T21:05:41,674 creating build/bdist.linux-armv7l/wheel/microhapdb/data/tests 2022-01-20T21:05:41,988 creating build/bdist.linux-armv7l/wheel/microhapdb/cli 2022-01-20T21:05:42,011 creating build/bdist.linux-armv7l/wheel/microhapdb/tests 2022-01-20T21:05:42,055 running install_egg_info 2022-01-20T21:05:42,071 Copying microhapdb.egg-info to build/bdist.linux-armv7l/wheel/microhapdb-0.7rc1-py3.7.egg-info 2022-01-20T21:05:42,097 running install_scripts 2022-01-20T21:05:44,945 Building wheel for microhapdb (setup.py): finished with status 'done' 2022-01-20T21:05:44,978 Created wheel for microhapdb: filename=microhapdb-0.7rc1-py3-none-any.whl size=951283 sha256=f2d5893791a08ef67b280b72732fe231d767f0a8572992036bd83818edf924fa 2022-01-20T21:05:44,979 Stored in directory: /tmp/pip-ephem-wheel-cache-4e2f8qrc/wheels/df/5d/1e/39cc177f0a63d6aa461edbede853df89ec912a0f8db4d7fc6f 2022-01-20T21:05:45,006 Successfully built microhapdb 2022-01-20T21:05:45,086 Removed build tracker: '/tmp/pip-req-tracker-6kxj8exx'