2022-01-22T01:23:53,716 Created temporary directory: /tmp/pip-ephem-wheel-cache-9ub7xmyn 2022-01-22T01:23:53,722 Created temporary directory: /tmp/pip-req-tracker-ky064nfj 2022-01-22T01:23:53,722 Initialized build tracking at /tmp/pip-req-tracker-ky064nfj 2022-01-22T01:23:53,723 Created build tracker: /tmp/pip-req-tracker-ky064nfj 2022-01-22T01:23:53,723 Entered build tracker: /tmp/pip-req-tracker-ky064nfj 2022-01-22T01:23:53,724 Created temporary directory: /tmp/pip-wheel-09_fbzkv 2022-01-22T01:23:53,790 Looking in indexes: https://pypi.org/simple, https://www.piwheels.org/simple 2022-01-22T01:23:53,796 2 location(s) to search for versions of reaction-network: 2022-01-22T01:23:53,796 * https://pypi.org/simple/reaction-network/ 2022-01-22T01:23:53,796 * https://www.piwheels.org/simple/reaction-network/ 2022-01-22T01:23:53,798 Fetching project page and analyzing links: https://pypi.org/simple/reaction-network/ 2022-01-22T01:23:53,799 Getting page https://pypi.org/simple/reaction-network/ 2022-01-22T01:23:53,802 Found index url https://pypi.org/simple 2022-01-22T01:23:54,014 Found link https://files.pythonhosted.org/packages/4e/49/c7f9b13af3da5f8515f15976104f17e835d458823d0de6721b249206d171/reaction-network-2.0.0.tar.gz#sha256=48011b52c0e60c1050cfe9e20f4eea0391e60522eeab848836043b4f06a58cbe (from https://pypi.org/simple/reaction-network/) (requires-python:>=3.7), version: 2.0.0 2022-01-22T01:23:54,015 Skipping link: No binaries permitted for reaction-network: https://files.pythonhosted.org/packages/75/da/bea87e9276ff2c48c46bbd75e15548f2fb59e0c33973c111a092e67500e2/reaction_network-2.0.0-py3-none-any.whl#sha256=f72b2843d66ab1f0c78f66e3f13767b57b031f4e17280594f63f4854bd240095 (from https://pypi.org/simple/reaction-network/) (requires-python:>=3.7) 2022-01-22T01:23:54,022 Found link https://files.pythonhosted.org/packages/55/04/886f43308b87f3e6ab4477a19f6364e2ac9787391a5f23a6e90b9976d1a4/reaction-network-2.0.1.tar.gz#sha256=3a19609e0a4d0feb44d08d3dfcda00b7ca9a4494319ac259d1890eb3d7615065 (from https://pypi.org/simple/reaction-network/) (requires-python:>=3.7), version: 2.0.1 2022-01-22T01:23:54,024 Found link https://files.pythonhosted.org/packages/a2/f9/6ebc22ce29a6b1087d1d04689e6a33571d658423c7849db05b02bd0141ab/reaction-network-2.0.3.tar.gz#sha256=ccdcb0dc378319fb1b1295acfa97959c5ebe1c8f72255b52bf8761e666a3d195 (from https://pypi.org/simple/reaction-network/) (requires-python:>=3.7), version: 2.0.3 2022-01-22T01:23:54,025 Found link https://files.pythonhosted.org/packages/3e/1e/7aeefb63a20b60a9f85f9b5487bc080ac8a1d347536cdb35b17d95a09e83/reaction-network-3.0.0.tar.gz#sha256=e5fe97301a19cb73c16fc9ddcf2bc41fa0c1cbd5f2be7fed326e7e034ff23c2d (from https://pypi.org/simple/reaction-network/) (requires-python:>=3.8), version: 3.0.0 2022-01-22T01:23:54,027 Found link https://files.pythonhosted.org/packages/a7/e5/a8a2e97d290b7b5d12481ab8d59697e59d3d9e709e55b4a79899e11ed67b/reaction-network-4.0.0.tar.gz#sha256=94f682d1443c87e97865f580d9b520b0092e99945986c90a815ab53a4d170759 (from https://pypi.org/simple/reaction-network/) (requires-python:>=3.8), version: 4.0.0 2022-01-22T01:23:54,028 Found link https://files.pythonhosted.org/packages/3e/c0/97c5c3d8db43dc57815ee8cdaf0a95fd79854768faa04a4d9087952f4df2/reaction-network-4.0.1.tar.gz#sha256=5e237f6c1035d068de869b950efeaa50e37c5416845f69c8069c1e1c25d4e7f7 (from https://pypi.org/simple/reaction-network/) (requires-python:>=3.8), version: 4.0.1 2022-01-22T01:23:54,029 Found link https://files.pythonhosted.org/packages/6d/f9/6c03614b89d947e861bac603f58acb964b3fcdcc656022d0cb6f9e48fc35/reaction-network-4.0.2.tar.gz#sha256=86ba84af7bf2c7848b6fcf52a31937a09b2666286b2d8b6f50aaadd2589efafe (from https://pypi.org/simple/reaction-network/) (requires-python:>=3.8), version: 4.0.2 2022-01-22T01:23:54,030 Fetching project page and analyzing links: https://www.piwheels.org/simple/reaction-network/ 2022-01-22T01:23:54,031 Getting page https://www.piwheels.org/simple/reaction-network/ 2022-01-22T01:23:54,033 Found index url https://www.piwheels.org/simple 2022-01-22T01:23:54,252 Skipping link: No binaries permitted for reaction-network: https://www.piwheels.org/simple/reaction-network/reaction_network-2.0.0-py3-none-any.whl#sha256=abe4e40aa7a14bc549961877680c7d04836a8745482f284c486670c08451e717 (from https://www.piwheels.org/simple/reaction-network/) (requires-python:>=3.7) 2022-01-22T01:23:54,253 Skipping link: No binaries permitted for reaction-network: https://www.piwheels.org/simple/reaction-network/reaction_network-2.0.1-py3-none-any.whl#sha256=4acec7b6fb491ae0233a61dfad8147667ce04efddbd7df365853dec8b77c8fd0 (from https://www.piwheels.org/simple/reaction-network/) (requires-python:>=3.7) 2022-01-22T01:23:54,253 Skipping link: No binaries permitted for reaction-network: https://www.piwheels.org/simple/reaction-network/reaction_network-2.0.3-py3-none-any.whl#sha256=a82eee1b3087fcfacab63403b044ac5bcf120fc4d3d2958059fef346d537190f (from https://www.piwheels.org/simple/reaction-network/) (requires-python:>=3.7) 2022-01-22T01:23:54,254 Skipping link: No binaries permitted for reaction-network: https://www.piwheels.org/simple/reaction-network/reaction_network-3.0.0-py3-none-any.whl#sha256=450b0ca9a578cd556a6ddfe833a442f33ae6294a0349de4d6abd4f3be625ab69 (from https://www.piwheels.org/simple/reaction-network/) (requires-python:>=3.8) 2022-01-22T01:23:54,254 Skipping link: No binaries permitted for reaction-network: https://www.piwheels.org/simple/reaction-network/reaction_network-4.0.0-py3-none-any.whl#sha256=4112988984f74c2fb004d950c1c9a1565b033c18d957ab081ab4301f7a32bb85 (from https://www.piwheels.org/simple/reaction-network/) (requires-python:>=3.8) 2022-01-22T01:23:54,255 Skipping link: not a file: https://www.piwheels.org/simple/reaction-network/ 2022-01-22T01:23:54,255 Skipping link: not a file: https://pypi.org/simple/reaction-network/ 2022-01-22T01:23:54,298 Given no hashes to check 1 links for project 'reaction-network': discarding no candidates 2022-01-22T01:23:54,336 Collecting reaction-network==4.0.2 2022-01-22T01:23:54,339 Created temporary directory: /tmp/pip-unpack-0_naicns 2022-01-22T01:23:54,771 Downloading reaction-network-4.0.2.tar.gz (6.9 MB) 2022-01-22T01:23:58,036 Added reaction-network==4.0.2 from https://files.pythonhosted.org/packages/6d/f9/6c03614b89d947e861bac603f58acb964b3fcdcc656022d0cb6f9e48fc35/reaction-network-4.0.2.tar.gz#sha256=86ba84af7bf2c7848b6fcf52a31937a09b2666286b2d8b6f50aaadd2589efafe to build tracker '/tmp/pip-req-tracker-ky064nfj' 2022-01-22T01:23:58,038 Running setup.py (path:/tmp/pip-wheel-09_fbzkv/reaction-network_6c6f6e4e0c5b4864a914b90875cc416f/setup.py) egg_info for package reaction-network 2022-01-22T01:23:58,039 Created temporary directory: /tmp/pip-pip-egg-info-jhxxtzff 2022-01-22T01:23:58,040 Preparing metadata (setup.py): started 2022-01-22T01:23:58,040 Running command python setup.py egg_info 2022-01-22T01:23:59,800 /usr/local/lib/python3.9/dist-packages/setuptools/installer.py:27: SetuptoolsDeprecationWarning: setuptools.installer is deprecated. Requirements should be satisfied by a PEP 517 installer. 2022-01-22T01:23:59,801 warnings.warn( 2022-01-22T01:24:09,180 /usr/local/lib/python3.9/dist-packages/setuptools/_distutils/dist.py:275: UserWarning: Unknown distribution option: 'extra_requires' 2022-01-22T01:24:09,181 warnings.warn(msg) 2022-01-22T01:24:09,696 running egg_info 2022-01-22T01:24:09,701 creating /tmp/pip-pip-egg-info-jhxxtzff/reaction_network.egg-info 2022-01-22T01:24:09,717 writing manifest file '/tmp/pip-pip-egg-info-jhxxtzff/reaction_network.egg-info/SOURCES.txt' 2022-01-22T01:24:09,944 listing git files failed - pretending there aren't any 2022-01-22T01:24:09,980 writing manifest file '/tmp/pip-pip-egg-info-jhxxtzff/reaction_network.egg-info/SOURCES.txt' 2022-01-22T01:24:10,130 Preparing metadata (setup.py): finished with status 'done' 2022-01-22T01:24:10,138 Source in /tmp/pip-wheel-09_fbzkv/reaction-network_6c6f6e4e0c5b4864a914b90875cc416f has version 4.0.2, which satisfies requirement reaction-network==4.0.2 from https://files.pythonhosted.org/packages/6d/f9/6c03614b89d947e861bac603f58acb964b3fcdcc656022d0cb6f9e48fc35/reaction-network-4.0.2.tar.gz#sha256=86ba84af7bf2c7848b6fcf52a31937a09b2666286b2d8b6f50aaadd2589efafe 2022-01-22T01:24:10,140 Removed reaction-network==4.0.2 from https://files.pythonhosted.org/packages/6d/f9/6c03614b89d947e861bac603f58acb964b3fcdcc656022d0cb6f9e48fc35/reaction-network-4.0.2.tar.gz#sha256=86ba84af7bf2c7848b6fcf52a31937a09b2666286b2d8b6f50aaadd2589efafe from build tracker '/tmp/pip-req-tracker-ky064nfj' 2022-01-22T01:24:10,155 Created temporary directory: /tmp/pip-unpack-q3idyuer 2022-01-22T01:24:10,156 Building wheels for collected packages: reaction-network 2022-01-22T01:24:10,164 Created temporary directory: /tmp/pip-wheel-1xl52buu 2022-01-22T01:24:10,165 Building wheel for reaction-network (setup.py): started 2022-01-22T01:24:10,165 Destination directory: /tmp/pip-wheel-1xl52buu 2022-01-22T01:24:10,166 Running command /usr/bin/python3 -u -c 'import io, os, sys, setuptools, tokenize; sys.argv[0] = '"'"'/tmp/pip-wheel-09_fbzkv/reaction-network_6c6f6e4e0c5b4864a914b90875cc416f/setup.py'"'"'; __file__='"'"'/tmp/pip-wheel-09_fbzkv/reaction-network_6c6f6e4e0c5b4864a914b90875cc416f/setup.py'"'"';f = getattr(tokenize, '"'"'open'"'"', open)(__file__) if os.path.exists(__file__) else io.StringIO('"'"'from setuptools import setup; setup()'"'"');code = f.read().replace('"'"'\r\n'"'"', '"'"'\n'"'"');f.close();exec(compile(code, __file__, '"'"'exec'"'"'))' bdist_wheel -d /tmp/pip-wheel-1xl52buu 2022-01-22T01:24:11,870 /usr/local/lib/python3.9/dist-packages/setuptools/installer.py:27: SetuptoolsDeprecationWarning: setuptools.installer is deprecated. Requirements should be satisfied by a PEP 517 installer. 2022-01-22T01:24:11,872 warnings.warn( 2022-01-22T01:24:12,568 /usr/local/lib/python3.9/dist-packages/setuptools/_distutils/dist.py:275: UserWarning: Unknown distribution option: 'extra_requires' 2022-01-22T01:24:12,568 warnings.warn(msg) 2022-01-22T01:24:13,048 running bdist_wheel 2022-01-22T01:24:13,466 running build 2022-01-22T01:24:13,467 running build_py 2022-01-22T01:24:13,475 creating build 2022-01-22T01:24:13,475 creating build/lib 2022-01-22T01:24:13,476 creating build/lib/rxn_network 2022-01-22T01:24:13,478 copying src/rxn_network/__init__.py -> build/lib/rxn_network 2022-01-22T01:24:13,483 creating build/lib/rxn_network/enumerators 2022-01-22T01:24:13,484 copying src/rxn_network/enumerators/basic.py -> build/lib/rxn_network/enumerators 2022-01-22T01:24:13,489 copying src/rxn_network/enumerators/utils.py -> build/lib/rxn_network/enumerators 2022-01-22T01:24:13,493 copying src/rxn_network/enumerators/minimize.py -> build/lib/rxn_network/enumerators 2022-01-22T01:24:13,496 copying src/rxn_network/enumerators/__init__.py -> build/lib/rxn_network/enumerators 2022-01-22T01:24:13,500 creating build/lib/rxn_network/data 2022-01-22T01:24:13,501 copying src/rxn_network/data/__init__.py -> build/lib/rxn_network/data 2022-01-22T01:24:13,506 creating build/lib/rxn_network/thermo 2022-01-22T01:24:13,507 copying src/rxn_network/thermo/chempot_diagram.py -> build/lib/rxn_network/thermo 2022-01-22T01:24:13,510 copying src/rxn_network/thermo/utils.py -> build/lib/rxn_network/thermo 2022-01-22T01:24:13,514 copying src/rxn_network/thermo/__init__.py -> build/lib/rxn_network/thermo 2022-01-22T01:24:13,518 creating build/lib/rxn_network/fireworks 2022-01-22T01:24:13,519 copying src/rxn_network/fireworks/core.py -> build/lib/rxn_network/fireworks 2022-01-22T01:24:13,523 copying src/rxn_network/fireworks/__init__.py -> build/lib/rxn_network/fireworks 2022-01-22T01:24:13,527 creating build/lib/rxn_network/firetasks 2022-01-22T01:24:13,529 copying src/rxn_network/firetasks/parse_outputs.py -> build/lib/rxn_network/firetasks 2022-01-22T01:24:13,532 copying src/rxn_network/firetasks/build_inputs.py -> build/lib/rxn_network/firetasks 2022-01-22T01:24:13,536 copying src/rxn_network/firetasks/utils.py -> build/lib/rxn_network/firetasks 2022-01-22T01:24:13,539 copying src/rxn_network/firetasks/__init__.py -> build/lib/rxn_network/firetasks 2022-01-22T01:24:13,542 copying src/rxn_network/firetasks/run_calc.py -> build/lib/rxn_network/firetasks 2022-01-22T01:24:13,547 creating build/lib/rxn_network/core 2022-01-22T01:24:13,549 copying src/rxn_network/core/solver.py -> build/lib/rxn_network/core 2022-01-22T01:24:13,552 copying src/rxn_network/core/network.py -> build/lib/rxn_network/core 2022-01-22T01:24:13,555 copying src/rxn_network/core/reaction.py -> build/lib/rxn_network/core 2022-01-22T01:24:13,558 copying src/rxn_network/core/pathway.py -> build/lib/rxn_network/core 2022-01-22T01:24:13,561 copying src/rxn_network/core/calculator.py -> build/lib/rxn_network/core 2022-01-22T01:24:13,563 copying src/rxn_network/core/cost_function.py -> build/lib/rxn_network/core 2022-01-22T01:24:13,566 copying src/rxn_network/core/__init__.py -> build/lib/rxn_network/core 2022-01-22T01:24:13,569 copying src/rxn_network/core/enumerator.py -> build/lib/rxn_network/core 2022-01-22T01:24:13,574 creating build/lib/rxn_network/costs 2022-01-22T01:24:13,575 copying src/rxn_network/costs/softplus.py -> build/lib/rxn_network/costs 2022-01-22T01:24:13,578 copying src/rxn_network/costs/__init__.py -> build/lib/rxn_network/costs 2022-01-22T01:24:13,581 copying src/rxn_network/costs/competitiveness.py -> build/lib/rxn_network/costs 2022-01-22T01:24:13,585 copying src/rxn_network/costs/calculators.py -> build/lib/rxn_network/costs 2022-01-22T01:24:13,590 creating build/lib/rxn_network/entries 2022-01-22T01:24:13,591 copying src/rxn_network/entries/gibbs.py -> build/lib/rxn_network/entries 2022-01-22T01:24:13,595 copying src/rxn_network/entries/entry_set.py -> build/lib/rxn_network/entries 2022-01-22T01:24:13,598 copying src/rxn_network/entries/barin.py -> build/lib/rxn_network/entries 2022-01-22T01:24:13,601 copying src/rxn_network/entries/nist.py -> build/lib/rxn_network/entries 2022-01-22T01:24:13,604 copying src/rxn_network/entries/__init__.py -> build/lib/rxn_network/entries 2022-01-22T01:24:13,607 copying src/rxn_network/entries/experimental.py -> build/lib/rxn_network/entries 2022-01-22T01:24:13,612 creating build/lib/rxn_network/reactions 2022-01-22T01:24:13,613 copying src/rxn_network/reactions/computed.py -> build/lib/rxn_network/reactions 2022-01-22T01:24:13,617 copying src/rxn_network/reactions/open.py -> build/lib/rxn_network/reactions 2022-01-22T01:24:13,621 copying src/rxn_network/reactions/basic.py -> build/lib/rxn_network/reactions 2022-01-22T01:24:13,625 copying src/rxn_network/reactions/plotting.py -> build/lib/rxn_network/reactions 2022-01-22T01:24:13,628 copying src/rxn_network/reactions/__init__.py -> build/lib/rxn_network/reactions 2022-01-22T01:24:13,630 copying src/rxn_network/reactions/reaction_set.py -> build/lib/rxn_network/reactions 2022-01-22T01:24:13,635 creating build/lib/rxn_network/network 2022-01-22T01:24:13,637 copying src/rxn_network/network/network.py -> build/lib/rxn_network/network 2022-01-22T01:24:13,641 copying src/rxn_network/network/gt.py -> build/lib/rxn_network/network 2022-01-22T01:24:13,644 copying src/rxn_network/network/entry.py -> build/lib/rxn_network/network 2022-01-22T01:24:13,647 copying src/rxn_network/network/utils.py -> build/lib/rxn_network/network 2022-01-22T01:24:13,650 copying src/rxn_network/network/__init__.py -> build/lib/rxn_network/network 2022-01-22T01:24:13,653 copying src/rxn_network/network/visualize.py -> build/lib/rxn_network/network 2022-01-22T01:24:13,658 creating build/lib/rxn_network/pathways 2022-01-22T01:24:13,659 copying src/rxn_network/pathways/solver.py -> build/lib/rxn_network/pathways 2022-01-22T01:24:13,664 copying src/rxn_network/pathways/basic.py -> build/lib/rxn_network/pathways 2022-01-22T01:24:13,667 copying src/rxn_network/pathways/pathway_set.py -> build/lib/rxn_network/pathways 2022-01-22T01:24:13,670 copying src/rxn_network/pathways/plotting.py -> build/lib/rxn_network/pathways 2022-01-22T01:24:13,674 copying src/rxn_network/pathways/balanced.py -> build/lib/rxn_network/pathways 2022-01-22T01:24:13,677 copying src/rxn_network/pathways/__init__.py -> build/lib/rxn_network/pathways 2022-01-22T01:24:13,681 creating build/lib/rxn_network/utils 2022-01-22T01:24:13,682 copying src/rxn_network/utils/funcs.py -> build/lib/rxn_network/utils 2022-01-22T01:24:13,688 copying src/rxn_network/utils/database.py -> build/lib/rxn_network/utils 2022-01-22T01:24:13,691 copying src/rxn_network/utils/__init__.py -> build/lib/rxn_network/utils 2022-01-22T01:24:13,694 running egg_info 2022-01-22T01:24:13,895 listing git files failed - pretending there aren't any 2022-01-22T01:24:13,975 writing manifest file 'src/reaction_network.egg-info/SOURCES.txt' 2022-01-22T01:24:13,991 copying src/rxn_network/py.typed -> build/lib/rxn_network 2022-01-22T01:24:13,995 copying src/rxn_network/data/README.md -> build/lib/rxn_network/data 2022-01-22T01:24:13,999 copying src/rxn_network/data/elements.json -> build/lib/rxn_network/data 2022-01-22T01:24:14,005 creating build/lib/rxn_network/data/barin 2022-01-22T01:24:14,006 copying src/rxn_network/data/barin/compounds.json -> build/lib/rxn_network/data/barin 2022-01-22T01:24:14,060 creating build/lib/rxn_network/data/nist 2022-01-22T01:24:14,061 copying src/rxn_network/data/nist/compounds.json -> build/lib/rxn_network/data/nist 2022-01-22T01:24:14,114 /usr/local/lib/python3.9/dist-packages/setuptools/command/install.py:34: SetuptoolsDeprecationWarning: setup.py install is deprecated. Use build and pip and other standards-based tools. 2022-01-22T01:24:14,115 warnings.warn( 2022-01-22T01:24:14,119 running install 2022-01-22T01:24:14,182 running install_lib 2022-01-22T01:24:14,189 creating build/bdist.linux-armv7l 2022-01-22T01:24:14,190 creating build/bdist.linux-armv7l/wheel 2022-01-22T01:24:14,194 creating build/bdist.linux-armv7l/wheel/rxn_network 2022-01-22T01:24:14,197 creating build/bdist.linux-armv7l/wheel/rxn_network/enumerators 2022-01-22T01:24:14,218 creating build/bdist.linux-armv7l/wheel/rxn_network/data 2022-01-22T01:24:14,221 creating build/bdist.linux-armv7l/wheel/rxn_network/data/nist 2022-01-22T01:24:14,259 creating build/bdist.linux-armv7l/wheel/rxn_network/data/barin 2022-01-22T01:24:14,317 creating build/bdist.linux-armv7l/wheel/rxn_network/thermo 2022-01-22T01:24:14,328 creating build/bdist.linux-armv7l/wheel/rxn_network/fireworks 2022-01-22T01:24:14,338 creating build/bdist.linux-armv7l/wheel/rxn_network/firetasks 2022-01-22T01:24:14,359 creating build/bdist.linux-armv7l/wheel/rxn_network/core 2022-01-22T01:24:14,385 creating build/bdist.linux-armv7l/wheel/rxn_network/costs 2022-01-22T01:24:14,402 creating build/bdist.linux-armv7l/wheel/rxn_network/entries 2022-01-22T01:24:14,426 creating build/bdist.linux-armv7l/wheel/rxn_network/reactions 2022-01-22T01:24:14,455 creating build/bdist.linux-armv7l/wheel/rxn_network/network 2022-01-22T01:24:14,479 creating build/bdist.linux-armv7l/wheel/rxn_network/pathways 2022-01-22T01:24:14,505 creating build/bdist.linux-armv7l/wheel/rxn_network/utils 2022-01-22T01:24:14,516 running install_egg_info 2022-01-22T01:24:14,525 Copying src/reaction_network.egg-info to build/bdist.linux-armv7l/wheel/reaction_network-4.0.2-py3.9.egg-info 2022-01-22T01:24:14,548 running install_scripts 2022-01-22T01:24:15,789 Building wheel for reaction-network (setup.py): finished with status 'done' 2022-01-22T01:24:15,810 Created wheel for reaction-network: filename=reaction_network-4.0.2-py3-none-any.whl size=551865 sha256=e55c70b9de3e70ca3d646f33b2d44557b5a8cc3c7466adc2066e64e8094c2d2c 2022-01-22T01:24:15,811 Stored in directory: /tmp/pip-ephem-wheel-cache-9ub7xmyn/wheels/77/75/bb/7a745ec140550063c52a27a30b5862a5e519f44bf144d3043d 2022-01-22T01:24:15,838 Successfully built reaction-network 2022-01-22T01:24:15,886 Removed build tracker: '/tmp/pip-req-tracker-ky064nfj'