2022-01-27T16:27:08,962 Created temporary directory: /tmp/pip-ephem-wheel-cache-uwnjg9m7 2022-01-27T16:27:08,968 Created temporary directory: /tmp/pip-req-tracker-41qex86j 2022-01-27T16:27:08,969 Initialized build tracking at /tmp/pip-req-tracker-41qex86j 2022-01-27T16:27:08,969 Created build tracker: /tmp/pip-req-tracker-41qex86j 2022-01-27T16:27:08,970 Entered build tracker: /tmp/pip-req-tracker-41qex86j 2022-01-27T16:27:08,971 Created temporary directory: /tmp/pip-wheel-cp4r1i8f 2022-01-27T16:27:09,042 Looking in indexes: https://pypi.org/simple, https://www.piwheels.org/simple 2022-01-27T16:27:09,048 2 location(s) to search for versions of modbampy: 2022-01-27T16:27:09,048 * https://pypi.org/simple/modbampy/ 2022-01-27T16:27:09,048 * https://www.piwheels.org/simple/modbampy/ 2022-01-27T16:27:09,049 Fetching project page and analyzing links: https://pypi.org/simple/modbampy/ 2022-01-27T16:27:09,050 Getting page https://pypi.org/simple/modbampy/ 2022-01-27T16:27:09,054 Found index url https://pypi.org/simple 2022-01-27T16:27:09,283 Skipping link: No binaries permitted for modbampy: https://files.pythonhosted.org/packages/cb/92/01d1ec72f52cd9d18713cfd5c7bb064ea70fe031fe238e265112fcd3beb2/modbampy-0.2.1-cp36-cp36m-manylinux_2_12_x86_64.manylinux2010_x86_64.whl#sha256=46d4c2c5add64b1c7fba490404ff463b777a1d3f57fe0c645aa5c4563f441263 (from https://pypi.org/simple/modbampy/) 2022-01-27T16:27:09,284 Skipping link: No binaries permitted for modbampy: https://files.pythonhosted.org/packages/35/0e/280e5b17b0bc460560075c77da9bd9299b6b7dcb0c061740a94f8b23c90e/modbampy-0.2.1-cp37-cp37m-manylinux_2_12_x86_64.manylinux2010_x86_64.whl#sha256=68b2f71492f7c491ce50d7652b203b4e1acfb5a39bee3d636caa1e812a2bc912 (from https://pypi.org/simple/modbampy/) 2022-01-27T16:27:09,284 Skipping link: No binaries permitted for modbampy: https://files.pythonhosted.org/packages/01/ef/99be5f576ff7db0f873bc7713921bffd2742fc5ccd6ab381f35a99c41854/modbampy-0.2.1-cp38-cp38-manylinux_2_12_x86_64.manylinux2010_x86_64.whl#sha256=52b6a20f924a029863c27bd2b9bb77174f19ae40f77902730d00befdfdd266f0 (from https://pypi.org/simple/modbampy/) 2022-01-27T16:27:09,285 Found link https://files.pythonhosted.org/packages/55/94/2b556fdd57566fec19f24653c37958d07292542dcc35a3c31b9a984ba0d0/modbampy-0.2.1.tar.gz#sha256=3f325673e6337e2d67fb09e7004f718a4d4d9a82a30ea49b40545c19bd78ed11 (from https://pypi.org/simple/modbampy/), version: 0.2.1 2022-01-27T16:27:09,286 Skipping link: No binaries permitted for modbampy: https://files.pythonhosted.org/packages/c2/ce/c3ebc2ce18ca8939e9e0710df6a8fea088c82aa4ca37e9f1eba32ddb5bc2/modbampy-0.2.2-cp36-cp36m-manylinux_2_12_x86_64.manylinux2010_x86_64.whl#sha256=811cfd1d021a6d0f8efdf8a88648896836c21cc9d3b0b11f7101c360967892d3 (from https://pypi.org/simple/modbampy/) 2022-01-27T16:27:09,286 Skipping link: No binaries permitted for modbampy: https://files.pythonhosted.org/packages/eb/10/c44dbeeee9dccadf0568f16f4a6776fca103e9a34ebb1e9fdcdeb7cddd7d/modbampy-0.2.2-cp37-cp37m-manylinux_2_12_x86_64.manylinux2010_x86_64.whl#sha256=2686f294fed887deedff963eaea42dbff5c9bdc218986c311fd46325bbea57f4 (from https://pypi.org/simple/modbampy/) 2022-01-27T16:27:09,287 Skipping link: No binaries permitted for modbampy: https://files.pythonhosted.org/packages/ce/d8/aa825e1ffd01346e323289eac83ed091d3927e86f4b621335c1eecef6090/modbampy-0.2.2-cp38-cp38-manylinux_2_12_x86_64.manylinux2010_x86_64.whl#sha256=c1bfda8e2105867ea207b701959dce3fca32f528cdc00a32bde9e48dca18be22 (from https://pypi.org/simple/modbampy/) 2022-01-27T16:27:09,287 Found link https://files.pythonhosted.org/packages/4f/e8/ba726f9225c971fa4c82d0bb1ac45735bce2a1894f1d735e03f175f61147/modbampy-0.2.2.tar.gz#sha256=ec77ba3ee07e4e03d8b8d4341ceb15c775f0c89fa059fcacbf9f1ce58260924b (from https://pypi.org/simple/modbampy/), version: 0.2.2 2022-01-27T16:27:09,288 Skipping link: No binaries permitted for modbampy: https://files.pythonhosted.org/packages/c0/20/e32f4cb98c5dd7b421f1e9f9800fb3e617b333b82fff52e96d4f8761257e/modbampy-0.3.0-cp36-cp36m-manylinux_2_12_x86_64.manylinux2010_x86_64.whl#sha256=2083b5d79443f47978846e3ecca3d0567b0c5d473b4fa4b3fe6e9802dbebcdf9 (from https://pypi.org/simple/modbampy/) 2022-01-27T16:27:09,289 Skipping link: No binaries permitted for modbampy: https://files.pythonhosted.org/packages/69/5d/abe04396191bfc1cbee3fed85295fcde0c2524778f76c6bf432bdf84644f/modbampy-0.3.0-cp37-cp37m-manylinux_2_12_x86_64.manylinux2010_x86_64.whl#sha256=9bd2e72a022f594d5afa043cea69876ddfd7b5db2a1901e5ba2952dd2b1b9cdc (from https://pypi.org/simple/modbampy/) 2022-01-27T16:27:09,289 Skipping link: No binaries permitted for modbampy: https://files.pythonhosted.org/packages/68/3e/26333f7e1a7d0bcd46b80085cd49f68aa614515f6786eb52e7273c17f610/modbampy-0.3.0-cp38-cp38-manylinux_2_12_x86_64.manylinux2010_x86_64.whl#sha256=9092bcd8b34e47177b63869610d462424d5d9bb863306c3e35da784081126fd1 (from https://pypi.org/simple/modbampy/) 2022-01-27T16:27:09,290 Found link https://files.pythonhosted.org/packages/a0/13/e81a05129f3852cc33ecf47a4d9de8c6cc3027ffbee86110a42cd7c462d0/modbampy-0.3.0.tar.gz#sha256=ec837d78a21817e99532a348b7ad44c28b3650ba0fe0d5df3b2c8dd819ad1fed (from https://pypi.org/simple/modbampy/), version: 0.3.0 2022-01-27T16:27:09,291 Skipping link: No binaries permitted for modbampy: https://files.pythonhosted.org/packages/6b/df/13ca551e50bcd1ad0d4f9d065aff6678e6abd34c01afcbe509b754829c3c/modbampy-0.3.1-cp36-cp36m-manylinux_2_12_x86_64.manylinux2010_x86_64.whl#sha256=a63027e365006da18b0af107c7085b80f5f571c9a0f611cdb0981a1ca35f92f6 (from https://pypi.org/simple/modbampy/) 2022-01-27T16:27:09,291 Skipping link: No binaries permitted for modbampy: https://files.pythonhosted.org/packages/c1/a3/75e6a684a93e4e1e0d84495b67adc77d0a03964eb66823357eb80b8f3686/modbampy-0.3.1-cp37-cp37m-manylinux_2_12_x86_64.manylinux2010_x86_64.whl#sha256=e998fc3ec582ef7442f3a91bbd39e84a38a212ac13bcba74c0d23f6fac4e82b9 (from https://pypi.org/simple/modbampy/) 2022-01-27T16:27:09,292 Skipping link: No binaries permitted for modbampy: https://files.pythonhosted.org/packages/1c/af/f164876eee34ef60a2d31ca8d853bd9bfbd6b93b397826abda65c953f486/modbampy-0.3.1-cp38-cp38-manylinux_2_12_x86_64.manylinux2010_x86_64.whl#sha256=bb5d1fbf9c85af16f985ae1ae3b83002921d642b87ffe6c4ac2723df5d2f3e04 (from https://pypi.org/simple/modbampy/) 2022-01-27T16:27:09,292 Found link https://files.pythonhosted.org/packages/15/10/6e0cde7c584add268b4382bd2ad6220e0161c0656da73aae80a063ba6a9b/modbampy-0.3.1.tar.gz#sha256=a078dd752832e119df50ee56da5f5db85e1b3687c77405e9fae30a6ed79c00f2 (from https://pypi.org/simple/modbampy/), version: 0.3.1 2022-01-27T16:27:09,293 Skipping link: No binaries permitted for modbampy: https://files.pythonhosted.org/packages/4d/d1/a88f41743c9eb30cf35a72461ee544ba1b105549a7b93ce84b582ca85c96/modbampy-0.3.2-cp36-cp36m-manylinux_2_12_x86_64.manylinux2010_x86_64.whl#sha256=c03575e1e1c9cf53d18d8637b174f502a2cc01f0af51551d98183cfa35acff0a (from https://pypi.org/simple/modbampy/) 2022-01-27T16:27:09,294 Skipping link: No binaries permitted for modbampy: https://files.pythonhosted.org/packages/3d/98/23189a4f83b1fc043c0505e651033a096be1e140486d7ecc9079b917db96/modbampy-0.3.2-cp37-cp37m-manylinux_2_12_x86_64.manylinux2010_x86_64.whl#sha256=14c2d2597e5fad3ef39154cfc3f87994b56fa8150be1c1a0f2e3bea0f6a2e11f (from https://pypi.org/simple/modbampy/) 2022-01-27T16:27:09,294 Skipping link: No binaries permitted for modbampy: https://files.pythonhosted.org/packages/b3/71/39abcdef209e85545ab1b1ca3423531f186aa6675dc4bffe031309f48136/modbampy-0.3.2-cp38-cp38-manylinux_2_12_x86_64.manylinux2010_x86_64.whl#sha256=4814269447add79ef669ee30e5f995cd25b51c279a32efe5404500d6f6281613 (from https://pypi.org/simple/modbampy/) 2022-01-27T16:27:09,295 Found link https://files.pythonhosted.org/packages/4c/5e/370d94b0b9cf28ae1287a254b34cbf8028bdf7063aa4a65ed3b45b852c69/modbampy-0.3.2.tar.gz#sha256=9bcd2a2c9570bc1f9d6fe4ffbbd6f2257d270d0bfa7a26123c48db6fdb0940cf (from https://pypi.org/simple/modbampy/), version: 0.3.2 2022-01-27T16:27:09,295 Skipping link: No binaries permitted for modbampy: https://files.pythonhosted.org/packages/59/1e/2f31980907d634aa927b1fd4d8ef136308c85f88cee2c34583e70289b3f4/modbampy-0.4.0-cp36-cp36m-manylinux_2_12_x86_64.manylinux2010_x86_64.whl#sha256=adbabcf5d1047f590463ee0b7a7f55a937326bf497432d499a945dbc24cd4d07 (from https://pypi.org/simple/modbampy/) 2022-01-27T16:27:09,296 Skipping link: No binaries permitted for modbampy: https://files.pythonhosted.org/packages/f6/3a/7236f1fb940d811752c7b447c1fd94106106337e62cf5fb94cd4fd0196fd/modbampy-0.4.0-cp37-cp37m-manylinux_2_12_x86_64.manylinux2010_x86_64.whl#sha256=5041aca7d1ccded0788bf4ac88412c5283ce21b678ed112c266179bf56322cbf (from https://pypi.org/simple/modbampy/) 2022-01-27T16:27:09,297 Skipping link: No binaries permitted for modbampy: https://files.pythonhosted.org/packages/55/3a/2f1c1861205216020f62a6f5086926e29040bd80f7f95292d07488b540e4/modbampy-0.4.0-cp38-cp38-manylinux_2_12_x86_64.manylinux2010_x86_64.whl#sha256=1998ead6346a8dc11f25580a923da07be9a8e582af7895f6365889f60085355f (from https://pypi.org/simple/modbampy/) 2022-01-27T16:27:09,297 Found link https://files.pythonhosted.org/packages/0a/d7/6ca78462e83d645337b954991a7ba1fbb915b140879d2ea092d8f926a949/modbampy-0.4.0.tar.gz#sha256=e8a4fc807c544d73ef8c82d501ee2397e25c0380df5f96e9a6028158cfb773df (from https://pypi.org/simple/modbampy/), version: 0.4.0 2022-01-27T16:27:09,298 Skipping link: No binaries permitted for modbampy: https://files.pythonhosted.org/packages/3b/62/98dda7380670fa1b74dfe60399ecc12acaaa848e40100b1d4cad315e3c28/modbampy-0.4.1-cp36-cp36m-manylinux_2_12_x86_64.manylinux2010_x86_64.whl#sha256=4aad235cea014113aadc0a03c5ecb84d4956b7d42115eb061a46bd2f4fdad84a (from https://pypi.org/simple/modbampy/) 2022-01-27T16:27:09,298 Skipping link: No binaries permitted for modbampy: https://files.pythonhosted.org/packages/87/00/1a51c04db7046e379ce8056116620a739464d09cfe38b6f91c9d2b5613cc/modbampy-0.4.1-cp37-cp37m-manylinux_2_12_x86_64.manylinux2010_x86_64.whl#sha256=d4338755f9ea676ca2c271a9e3bf85f3b70dbc864d34f13f418de9a9b7130fc1 (from https://pypi.org/simple/modbampy/) 2022-01-27T16:27:09,299 Skipping link: No binaries permitted for modbampy: https://files.pythonhosted.org/packages/e7/b5/4718677c3cde1042b0cad1fcea37da450cfd8cc3a0f8baec525495f57caa/modbampy-0.4.1-cp38-cp38-manylinux_2_12_x86_64.manylinux2010_x86_64.whl#sha256=de75f136277cd2eb7a323e768070800d7d8e10dfc830706f3f70424bfbfca2b8 (from https://pypi.org/simple/modbampy/) 2022-01-27T16:27:09,300 Found link https://files.pythonhosted.org/packages/80/91/9f8865064a549b5b403ce3ce946449ab4dac13a1f4950fb357612935c42e/modbampy-0.4.1.tar.gz#sha256=3b463cf6f7e26127ff1af6e82955c0514291346ab2b65048289065ce318385a1 (from https://pypi.org/simple/modbampy/), version: 0.4.1 2022-01-27T16:27:09,300 Fetching project page and analyzing links: https://www.piwheels.org/simple/modbampy/ 2022-01-27T16:27:09,301 Getting page https://www.piwheels.org/simple/modbampy/ 2022-01-27T16:27:09,303 Found index url https://www.piwheels.org/simple 2022-01-27T16:27:09,515 Skipping link: not a file: https://www.piwheels.org/simple/modbampy/ 2022-01-27T16:27:09,515 Skipping link: not a file: https://pypi.org/simple/modbampy/ 2022-01-27T16:27:09,551 Given no hashes to check 1 links for project 'modbampy': discarding no candidates 2022-01-27T16:27:09,582 Collecting modbampy==0.4.1 2022-01-27T16:27:09,585 Created temporary directory: /tmp/pip-unpack-xgrkr7f4 2022-01-27T16:27:09,680 Downloading modbampy-0.4.1.tar.gz (810 kB) 2022-01-27T16:27:11,057 Added modbampy==0.4.1 from https://files.pythonhosted.org/packages/80/91/9f8865064a549b5b403ce3ce946449ab4dac13a1f4950fb357612935c42e/modbampy-0.4.1.tar.gz#sha256=3b463cf6f7e26127ff1af6e82955c0514291346ab2b65048289065ce318385a1 to build tracker '/tmp/pip-req-tracker-41qex86j' 2022-01-27T16:27:11,058 Running setup.py (path:/tmp/pip-wheel-cp4r1i8f/modbampy_cedcc147f619447389f4a6a4e4bf50f5/setup.py) egg_info for package modbampy 2022-01-27T16:27:11,060 Created temporary directory: /tmp/pip-pip-egg-info-1f62swla 2022-01-27T16:27:11,060 Preparing metadata (setup.py): started 2022-01-27T16:27:11,061 Running command python setup.py egg_info 2022-01-27T16:27:13,928 running egg_info 2022-01-27T16:27:13,935 creating /tmp/pip-pip-egg-info-1f62swla/modbampy.egg-info 2022-01-27T16:27:13,953 writing manifest file '/tmp/pip-pip-egg-info-1f62swla/modbampy.egg-info/SOURCES.txt' 2022-01-27T16:27:13,982 /usr/lib/python3/dist-packages/cffi/cparser.py:150: UserWarning: String literal found in cdef() or type source. String literals are ignored here, but you should remove them anyway because some character sequences confuse pre-parsing. 2022-01-27T16:27:13,982 warnings.warn("String literal found in cdef() or type source. " 2022-01-27T16:27:13,983 warning: no files found matching 'LICENSE.md' 2022-01-27T16:27:14,017 no previously-included directories found matching 'htslib/test' 2022-01-27T16:27:14,019 no previously-included directories found matching 'htslib/htscodecs/tests' 2022-01-27T16:27:14,022 no previously-included directories found matching 'build' 2022-01-27T16:27:14,023 no previously-included directories found matching 'docs' 2022-01-27T16:27:14,042 writing manifest file '/tmp/pip-pip-egg-info-1f62swla/modbampy.egg-info/SOURCES.txt' 2022-01-27T16:27:14,208 Preparing metadata (setup.py): finished with status 'done' 2022-01-27T16:27:14,217 Source in /tmp/pip-wheel-cp4r1i8f/modbampy_cedcc147f619447389f4a6a4e4bf50f5 has version 0.4.1, which satisfies requirement modbampy==0.4.1 from https://files.pythonhosted.org/packages/80/91/9f8865064a549b5b403ce3ce946449ab4dac13a1f4950fb357612935c42e/modbampy-0.4.1.tar.gz#sha256=3b463cf6f7e26127ff1af6e82955c0514291346ab2b65048289065ce318385a1 2022-01-27T16:27:14,220 Removed modbampy==0.4.1 from https://files.pythonhosted.org/packages/80/91/9f8865064a549b5b403ce3ce946449ab4dac13a1f4950fb357612935c42e/modbampy-0.4.1.tar.gz#sha256=3b463cf6f7e26127ff1af6e82955c0514291346ab2b65048289065ce318385a1 from build tracker '/tmp/pip-req-tracker-41qex86j' 2022-01-27T16:27:14,230 Created temporary directory: /tmp/pip-unpack-jj5ar7dz 2022-01-27T16:27:14,231 Building wheels for collected packages: modbampy 2022-01-27T16:27:14,239 Created temporary directory: /tmp/pip-wheel-mp8c1m3q 2022-01-27T16:27:14,240 Building wheel for modbampy (setup.py): started 2022-01-27T16:27:14,241 Destination directory: /tmp/pip-wheel-mp8c1m3q 2022-01-27T16:27:14,241 Running command /usr/bin/python3 -u -c 'import io, os, sys, setuptools, tokenize; sys.argv[0] = '"'"'/tmp/pip-wheel-cp4r1i8f/modbampy_cedcc147f619447389f4a6a4e4bf50f5/setup.py'"'"'; __file__='"'"'/tmp/pip-wheel-cp4r1i8f/modbampy_cedcc147f619447389f4a6a4e4bf50f5/setup.py'"'"';f = getattr(tokenize, '"'"'open'"'"', open)(__file__) if os.path.exists(__file__) else io.StringIO('"'"'from setuptools import setup; setup()'"'"');code = f.read().replace('"'"'\r\n'"'"', '"'"'\n'"'"');f.close();exec(compile(code, __file__, '"'"'exec'"'"'))' bdist_wheel -d /tmp/pip-wheel-mp8c1m3q 2022-01-27T16:27:16,611 /usr/lib/python3/dist-packages/cffi/cparser.py:150: UserWarning: String literal found in cdef() or type source. String literals are ignored here, but you should remove them anyway because some character sequences confuse pre-parsing. 2022-01-27T16:27:16,612 warnings.warn("String literal found in cdef() or type source. " 2022-01-27T16:27:16,953 running bdist_wheel 2022-01-27T16:27:16,962 running build 2022-01-27T16:27:16,962 running build_py 2022-01-27T16:27:16,969 creating build 2022-01-27T16:27:16,970 creating build/lib.linux-armv7l-3.7 2022-01-27T16:27:16,971 creating build/lib.linux-armv7l-3.7/modbampy 2022-01-27T16:27:16,973 copying modbampy/__init__.py -> build/lib.linux-armv7l-3.7/modbampy 2022-01-27T16:27:16,978 running build_ext 2022-01-27T16:27:16,979 creating build/temp.linux-armv7l-3.7 2022-01-27T16:27:17,029 Compiling htslib using Makefile 2022-01-27T16:27:17,079 Compiling libhts.a 2022-01-27T16:27:17,081 cd htslib/ \ 2022-01-27T16:27:17,081 && autoheader \ 2022-01-27T16:27:17,082 && autoconf \ 2022-01-27T16:27:17,082 && CFLAGS="-fpic -msse3 -O3 -std=c99 " ./configure \ 2022-01-27T16:27:17,082 && make -j 4 2022-01-27T16:27:22,386 checking for gcc... gcc 2022-01-27T16:27:22,692 checking whether the C compiler works... no 2022-01-27T16:27:22,709 configure: error: in `/tmp/pip-wheel-cp4r1i8f/modbampy_cedcc147f619447389f4a6a4e4bf50f5/htslib': 2022-01-27T16:27:22,711 configure: error: C compiler cannot create executables 2022-01-27T16:27:22,712 See `config.log' for more details 2022-01-27T16:27:22,897 make: *** [Makefile:29: htslib/libhts.a] Error 77 2022-01-27T16:27:22,900 Traceback (most recent call last): 2022-01-27T16:27:22,900 File "", line 1, in 2022-01-27T16:27:22,900 File "/tmp/pip-wheel-cp4r1i8f/modbampy_cedcc147f619447389f4a6a4e4bf50f5/setup.py", line 89, in 2022-01-27T16:27:22,902 scripts=[] 2022-01-27T16:27:22,902 File "/usr/local/lib/python3.7/dist-packages/setuptools/__init__.py", line 155, in setup 2022-01-27T16:27:22,903 return distutils.core.setup(**attrs) 2022-01-27T16:27:22,903 File "/usr/local/lib/python3.7/dist-packages/setuptools/_distutils/core.py", line 148, in setup 2022-01-27T16:27:22,904 return run_commands(dist) 2022-01-27T16:27:22,904 File "/usr/local/lib/python3.7/dist-packages/setuptools/_distutils/core.py", line 163, in run_commands 2022-01-27T16:27:22,905 dist.run_commands() 2022-01-27T16:27:22,905 File "/usr/local/lib/python3.7/dist-packages/setuptools/_distutils/dist.py", line 967, in run_commands 2022-01-27T16:27:22,908 self.run_command(cmd) 2022-01-27T16:27:22,908 File "/usr/local/lib/python3.7/dist-packages/setuptools/_distutils/dist.py", line 986, in run_command 2022-01-27T16:27:22,910 cmd_obj.run() 2022-01-27T16:27:22,911 File "/usr/lib/python3/dist-packages/wheel/bdist_wheel.py", line 188, in run 2022-01-27T16:27:22,911 self.run_command('build') 2022-01-27T16:27:22,912 File "/usr/local/lib/python3.7/dist-packages/setuptools/_distutils/cmd.py", line 313, in run_command 2022-01-27T16:27:22,913 self.distribution.run_command(command) 2022-01-27T16:27:22,913 File "/usr/local/lib/python3.7/dist-packages/setuptools/_distutils/dist.py", line 986, in run_command 2022-01-27T16:27:22,915 cmd_obj.run() 2022-01-27T16:27:22,916 File "/usr/local/lib/python3.7/dist-packages/setuptools/_distutils/command/build.py", line 135, in run 2022-01-27T16:27:22,916 self.run_command(cmd_name) 2022-01-27T16:27:22,917 File "/usr/local/lib/python3.7/dist-packages/setuptools/_distutils/cmd.py", line 313, in run_command 2022-01-27T16:27:22,918 self.distribution.run_command(command) 2022-01-27T16:27:22,918 File "/usr/local/lib/python3.7/dist-packages/setuptools/_distutils/dist.py", line 986, in run_command 2022-01-27T16:27:22,920 cmd_obj.run() 2022-01-27T16:27:22,921 File "/usr/lib/python3/dist-packages/cffi/setuptools_ext.py", line 142, in run 2022-01-27T16:27:22,923 base_class.run(self) 2022-01-27T16:27:22,923 File "/tmp/pip-wheel-cp4r1i8f/modbampy_cedcc147f619447389f4a6a4e4bf50f5/setup.py", line 57, in run 2022-01-27T16:27:22,924 self.execute(compile_hts, [], 'Compiling htslib using Makefile') 2022-01-27T16:27:22,924 File "/usr/local/lib/python3.7/dist-packages/setuptools/_distutils/cmd.py", line 335, in execute 2022-01-27T16:27:22,925 util.execute(func, args, msg, dry_run=self.dry_run) 2022-01-27T16:27:22,925 File "/usr/local/lib/python3.7/dist-packages/setuptools/_distutils/util.py", line 374, in execute 2022-01-27T16:27:22,946 func(*args) 2022-01-27T16:27:22,947 File "/tmp/pip-wheel-cp4r1i8f/modbampy_cedcc147f619447389f4a6a4e4bf50f5/setup.py", line 55, in compile_hts 2022-01-27T16:27:22,947 subprocess.check_call(['make', os.path.join('htslib', 'libhts.a'), 'pymod.a']) 2022-01-27T16:27:22,948 File "/usr/lib/python3.7/subprocess.py", line 347, in check_call 2022-01-27T16:27:22,949 raise CalledProcessError(retcode, cmd) 2022-01-27T16:27:22,949 subprocess.CalledProcessError: Command '['make', 'htslib/libhts.a', 'pymod.a']' returned non-zero exit status 2. 2022-01-27T16:27:23,134 Building wheel for modbampy (setup.py): finished with status 'error' 2022-01-27T16:27:23,136 ERROR: Failed building wheel for modbampy 2022-01-27T16:27:23,137 Running setup.py clean for modbampy 2022-01-27T16:27:23,138 Running command /usr/bin/python3 -u -c 'import io, os, sys, setuptools, tokenize; sys.argv[0] = '"'"'/tmp/pip-wheel-cp4r1i8f/modbampy_cedcc147f619447389f4a6a4e4bf50f5/setup.py'"'"'; __file__='"'"'/tmp/pip-wheel-cp4r1i8f/modbampy_cedcc147f619447389f4a6a4e4bf50f5/setup.py'"'"';f = getattr(tokenize, '"'"'open'"'"', open)(__file__) if os.path.exists(__file__) else io.StringIO('"'"'from setuptools import setup; setup()'"'"');code = f.read().replace('"'"'\r\n'"'"', '"'"'\n'"'"');f.close();exec(compile(code, __file__, '"'"'exec'"'"'))' clean --all 2022-01-27T16:27:25,468 /usr/lib/python3/dist-packages/cffi/cparser.py:150: UserWarning: String literal found in cdef() or type source. String literals are ignored here, but you should remove them anyway because some character sequences confuse pre-parsing. 2022-01-27T16:27:25,469 warnings.warn("String literal found in cdef() or type source. " 2022-01-27T16:27:25,770 running clean 2022-01-27T16:27:25,774 removing 'build/temp.linux-armv7l-3.7' (and everything under it) 2022-01-27T16:27:25,776 removing 'build/lib.linux-armv7l-3.7' (and everything under it) 2022-01-27T16:27:25,780 'build/bdist.linux-armv7l' does not exist -- can't clean it 2022-01-27T16:27:25,780 'build/scripts-3.7' does not exist -- can't clean it 2022-01-27T16:27:25,945 Failed to build modbampy 2022-01-27T16:27:25,946 ERROR: Failed to build one or more wheels 2022-01-27T16:27:25,948 Exception information: 2022-01-27T16:27:25,948 Traceback (most recent call last): 2022-01-27T16:27:25,948 File "/usr/local/lib/python3.7/dist-packages/pip/_internal/cli/base_command.py", line 164, in exc_logging_wrapper 2022-01-27T16:27:25,948 status = run_func(*args) 2022-01-27T16:27:25,948 File "/usr/local/lib/python3.7/dist-packages/pip/_internal/cli/req_command.py", line 205, in wrapper 2022-01-27T16:27:25,948 return func(self, options, args) 2022-01-27T16:27:25,948 File "/usr/local/lib/python3.7/dist-packages/pip/_internal/commands/wheel.py", line 175, in run 2022-01-27T16:27:25,948 raise CommandError("Failed to build one or more wheels") 2022-01-27T16:27:25,948 pip._internal.exceptions.CommandError: Failed to build one or more wheels 2022-01-27T16:27:25,954 Removed build tracker: '/tmp/pip-req-tracker-41qex86j'