2022-02-03T05:44:15,981 Created temporary directory: /tmp/pip-ephem-wheel-cache-d1peqrej 2022-02-03T05:44:15,986 Created temporary directory: /tmp/pip-req-tracker-lvqe8zwi 2022-02-03T05:44:15,987 Initialized build tracking at /tmp/pip-req-tracker-lvqe8zwi 2022-02-03T05:44:15,987 Created build tracker: /tmp/pip-req-tracker-lvqe8zwi 2022-02-03T05:44:15,988 Entered build tracker: /tmp/pip-req-tracker-lvqe8zwi 2022-02-03T05:44:15,989 Created temporary directory: /tmp/pip-wheel-s91zpmrm 2022-02-03T05:44:16,056 Looking in indexes: https://pypi.org/simple, https://www.piwheels.org/simple 2022-02-03T05:44:16,061 2 location(s) to search for versions of cdot: 2022-02-03T05:44:16,061 * https://pypi.org/simple/cdot/ 2022-02-03T05:44:16,061 * https://www.piwheels.org/simple/cdot/ 2022-02-03T05:44:16,063 Fetching project page and analyzing links: https://pypi.org/simple/cdot/ 2022-02-03T05:44:16,064 Getting page https://pypi.org/simple/cdot/ 2022-02-03T05:44:16,067 Found index url https://pypi.org/simple 2022-02-03T05:44:16,350 Skipping link: No binaries permitted for cdot: https://files.pythonhosted.org/packages/3d/22/214ad62937068f36bf8cafa3bba79d1c7eb161a3dcc7580e4338b63fc544/cdot-0.1.1-py3-none-any.whl#sha256=42432acf179300c78b9e959ce4dc222656e09b73efe41559903774061352c786 (from https://pypi.org/simple/cdot/) (requires-python:>=3.8) 2022-02-03T05:44:16,352 Found link https://files.pythonhosted.org/packages/13/d4/dc0da1d4851fc43dedc758568a35a82e1ce4965786b5037939d62a4ef1de/cdot-0.1.1.tar.gz#sha256=84f858c4c95d7dc979df810e75ed8c794be418fb5fddbac937dc0cc2cfa0d5eb (from https://pypi.org/simple/cdot/) (requires-python:>=3.8), version: 0.1.1 2022-02-03T05:44:16,353 Skipping link: No binaries permitted for cdot: https://files.pythonhosted.org/packages/d6/cb/4a25bf6c788c392e69f7a0b8ebfb5740f520ea8cf1f5af9e0d9e26d12385/cdot-0.2.1-py3-none-any.whl#sha256=d2aab58418a194f2be5bceeafa9ac262bd38fd103e4716ad9987cad2f2fca63f (from https://pypi.org/simple/cdot/) (requires-python:>=3.8) 2022-02-03T05:44:16,354 Found link https://files.pythonhosted.org/packages/ef/80/850c81ff00fe8a3235d3a37de20af192ba871998392cdb3ce64d96abcad5/cdot-0.2.1.tar.gz#sha256=5b0b5f642923c5e54fe7fe59b7d5f78dfd538bc4e0a07fc67df9ef0b06b88b53 (from https://pypi.org/simple/cdot/) (requires-python:>=3.8), version: 0.2.1 2022-02-03T05:44:16,355 Skipping link: No binaries permitted for cdot: https://files.pythonhosted.org/packages/6e/34/de1475aad1654bc2d9f96ef673784966ae8e6520839e43d917f3bb3a43e1/cdot-0.2.2-py3-none-any.whl#sha256=5aab43860903c145edf79d5ae101add32f1747d19bb5757c93bb593b4f0ce487 (from https://pypi.org/simple/cdot/) (requires-python:>=3.8) 2022-02-03T05:44:16,356 Found link https://files.pythonhosted.org/packages/0a/4a/c7e2522e7ae27004f112a22a0899b12f400ea4fbdfecbbe05fe3e85d0d7b/cdot-0.2.2.tar.gz#sha256=25a389385d180928e2bd08dea78ed888a3223a9c20924af37af6a9443db1cb7e (from https://pypi.org/simple/cdot/) (requires-python:>=3.8), version: 0.2.2 2022-02-03T05:44:16,357 Fetching project page and analyzing links: https://www.piwheels.org/simple/cdot/ 2022-02-03T05:44:16,357 Getting page https://www.piwheels.org/simple/cdot/ 2022-02-03T05:44:16,365 Found index url https://www.piwheels.org/simple 2022-02-03T05:44:16,690 Skipping link: No binaries permitted for cdot: https://www.piwheels.org/simple/cdot/cdot-0.1.1-py3-none-any.whl#sha256=5d90d2b2abd202ce3a63e85c9dd7bb20658f273945be1c0af354e50a1971dc17 (from https://www.piwheels.org/simple/cdot/) (requires-python:>=3.8) 2022-02-03T05:44:16,691 Skipping link: not a file: https://www.piwheels.org/simple/cdot/ 2022-02-03T05:44:16,692 Skipping link: not a file: https://pypi.org/simple/cdot/ 2022-02-03T05:44:16,736 Given no hashes to check 1 links for project 'cdot': discarding no candidates 2022-02-03T05:44:16,778 Collecting cdot==0.2.1 2022-02-03T05:44:16,782 Created temporary directory: /tmp/pip-unpack-m5240f6p 2022-02-03T05:44:17,015 Downloading cdot-0.2.1.tar.gz (16 kB) 2022-02-03T05:44:17,137 Added cdot==0.2.1 from https://files.pythonhosted.org/packages/ef/80/850c81ff00fe8a3235d3a37de20af192ba871998392cdb3ce64d96abcad5/cdot-0.2.1.tar.gz#sha256=5b0b5f642923c5e54fe7fe59b7d5f78dfd538bc4e0a07fc67df9ef0b06b88b53 to build tracker '/tmp/pip-req-tracker-lvqe8zwi' 2022-02-03T05:44:17,146 Created temporary directory: /tmp/pip-build-env-p7l3_t8o 2022-02-03T05:44:17,167 Created temporary directory: /tmp/pip-standalone-pip-j105k4zi 2022-02-03T05:44:18,901 Installing build dependencies: started 2022-02-03T05:44:18,902 Running command /usr/bin/python3 /tmp/pip-standalone-pip-j105k4zi/__env_pip__.zip/pip install --ignore-installed --no-user --prefix /tmp/pip-build-env-p7l3_t8o/overlay --no-warn-script-location -v --no-binary cdot --only-binary :none: -i https://pypi.org/simple --extra-index-url https://www.piwheels.org/simple --prefer-binary -- 'setuptools>=42' wheel 2022-02-03T05:44:27,983 Using pip 21.3.1 from /tmp/pip-standalone-pip-j105k4zi/__env_pip__.zip/pip (python 3.9) 2022-02-03T05:44:28,824 Looking in indexes: https://pypi.org/simple, https://www.piwheels.org/simple 2022-02-03T05:44:33,750 Collecting setuptools>=42 2022-02-03T05:44:33,769 Downloading https://www.piwheels.org/simple/setuptools/setuptools-60.7.1-py3-none-any.whl (1.0 MB) 2022-02-03T05:44:34,713 Collecting wheel 2022-02-03T05:44:34,750 Using cached https://www.piwheels.org/simple/wheel/wheel-0.37.1-py2.py3-none-any.whl (35 kB) 2022-02-03T05:44:38,044 Installing collected packages: wheel, setuptools 2022-02-03T05:44:38,328 Creating /tmp/pip-build-env-p7l3_t8o/overlay/bin 2022-02-03T05:44:38,331 changing mode of /tmp/pip-build-env-p7l3_t8o/overlay/bin/wheel to 755 2022-02-03T05:44:42,128 Successfully installed setuptools-60.7.1 wheel-0.37.1 2022-02-03T05:44:42,305 WARNING: You are using pip version 21.3.1; however, version 22.0.2 is available. 2022-02-03T05:44:42,305 You should consider upgrading via the '/usr/bin/python3 -m pip install --upgrade pip' command. 2022-02-03T05:44:42,710 Installing build dependencies: finished with status 'done' 2022-02-03T05:44:42,731 Getting requirements to build wheel: started 2022-02-03T05:44:42,732 Running command /usr/bin/python3 /usr/local/lib/python3.9/dist-packages/pip/_vendor/pep517/in_process/_in_process.py get_requires_for_build_wheel /tmp/tmpgat0otb9 2022-02-03T05:44:44,521 running egg_info 2022-02-03T05:44:44,572 writing manifest file 'cdot.egg-info/SOURCES.txt' 2022-02-03T05:44:44,692 Getting requirements to build wheel: finished with status 'done' 2022-02-03T05:44:44,709 Created temporary directory: /tmp/pip-modern-metadata-9lssa31g 2022-02-03T05:44:44,715 Preparing metadata (pyproject.toml): started 2022-02-03T05:44:44,716 Running command /usr/bin/python3 /usr/local/lib/python3.9/dist-packages/pip/_vendor/pep517/in_process/_in_process.py prepare_metadata_for_build_wheel /tmp/tmpcj2l2qc8 2022-02-03T05:44:46,378 running dist_info 2022-02-03T05:44:46,407 creating /tmp/pip-modern-metadata-9lssa31g/cdot.egg-info 2022-02-03T05:44:46,422 writing manifest file '/tmp/pip-modern-metadata-9lssa31g/cdot.egg-info/SOURCES.txt' 2022-02-03T05:44:46,450 writing manifest file '/tmp/pip-modern-metadata-9lssa31g/cdot.egg-info/SOURCES.txt' 2022-02-03T05:44:46,708 Preparing metadata (pyproject.toml): finished with status 'done' 2022-02-03T05:44:46,720 Source in /tmp/pip-wheel-s91zpmrm/cdot_34816b64805e4eafaa5c07a147b9d090 has version 0.2.1, which satisfies requirement cdot==0.2.1 from https://files.pythonhosted.org/packages/ef/80/850c81ff00fe8a3235d3a37de20af192ba871998392cdb3ce64d96abcad5/cdot-0.2.1.tar.gz#sha256=5b0b5f642923c5e54fe7fe59b7d5f78dfd538bc4e0a07fc67df9ef0b06b88b53 2022-02-03T05:44:46,722 Removed cdot==0.2.1 from https://files.pythonhosted.org/packages/ef/80/850c81ff00fe8a3235d3a37de20af192ba871998392cdb3ce64d96abcad5/cdot-0.2.1.tar.gz#sha256=5b0b5f642923c5e54fe7fe59b7d5f78dfd538bc4e0a07fc67df9ef0b06b88b53 from build tracker '/tmp/pip-req-tracker-lvqe8zwi' 2022-02-03T05:44:46,735 Created temporary directory: /tmp/pip-unpack-zvbq5sjp 2022-02-03T05:44:46,736 Building wheels for collected packages: cdot 2022-02-03T05:44:46,744 Created temporary directory: /tmp/pip-wheel-guzuvn95 2022-02-03T05:44:46,744 Destination directory: /tmp/pip-wheel-guzuvn95 2022-02-03T05:44:46,749 Building wheel for cdot (pyproject.toml): started 2022-02-03T05:44:46,750 Running command /usr/bin/python3 /usr/local/lib/python3.9/dist-packages/pip/_vendor/pep517/in_process/_in_process.py build_wheel /tmp/tmpcd68vhp0 2022-02-03T05:44:48,502 running bdist_wheel 2022-02-03T05:44:48,923 running build 2022-02-03T05:44:48,923 running build_py 2022-02-03T05:44:48,931 creating build 2022-02-03T05:44:48,931 creating build/lib 2022-02-03T05:44:48,932 creating build/lib/cdot 2022-02-03T05:44:48,934 copying cdot/__init__.py -> build/lib/cdot 2022-02-03T05:44:48,939 creating build/lib/tests 2022-02-03T05:44:48,940 copying tests/test_json_data_provider.py -> build/lib/tests 2022-02-03T05:44:48,944 copying tests/test_pyhgvs.py -> build/lib/tests 2022-02-03T05:44:48,947 copying tests/benchmark_hgvs.py -> build/lib/tests 2022-02-03T05:44:48,951 copying tests/__init__.py -> build/lib/tests 2022-02-03T05:44:48,953 copying tests/genome.py -> build/lib/tests 2022-02-03T05:44:48,958 creating build/lib/cdot/hgvs 2022-02-03T05:44:48,959 copying cdot/hgvs/__init__.py -> build/lib/cdot/hgvs 2022-02-03T05:44:48,963 creating build/lib/cdot/pyhgvs 2022-02-03T05:44:48,964 copying cdot/pyhgvs/__init__.py -> build/lib/cdot/pyhgvs 2022-02-03T05:44:48,967 copying cdot/pyhgvs/pyhgvs_transcript.py -> build/lib/cdot/pyhgvs 2022-02-03T05:44:48,971 creating build/lib/cdot/gff 2022-02-03T05:44:48,973 copying cdot/gff/gff_parser.py -> build/lib/cdot/gff 2022-02-03T05:44:48,977 copying cdot/gff/__init__.py -> build/lib/cdot/gff 2022-02-03T05:44:48,981 creating build/lib/cdot/hgvs/dataproviders 2022-02-03T05:44:48,982 copying cdot/hgvs/dataproviders/__init__.py -> build/lib/cdot/hgvs/dataproviders 2022-02-03T05:44:48,986 copying cdot/hgvs/dataproviders/json_data_provider.py -> build/lib/cdot/hgvs/dataproviders 2022-02-03T05:44:49,012 running install 2022-02-03T05:44:49,073 running install_lib 2022-02-03T05:44:49,079 creating build/bdist.linux-armv7l 2022-02-03T05:44:49,080 creating build/bdist.linux-armv7l/wheel 2022-02-03T05:44:49,083 creating build/bdist.linux-armv7l/wheel/cdot 2022-02-03T05:44:49,086 creating build/bdist.linux-armv7l/wheel/cdot/hgvs 2022-02-03T05:44:49,088 creating build/bdist.linux-armv7l/wheel/cdot/hgvs/dataproviders 2022-02-03T05:44:49,104 creating build/bdist.linux-armv7l/wheel/cdot/pyhgvs 2022-02-03T05:44:49,114 creating build/bdist.linux-armv7l/wheel/cdot/gff 2022-02-03T05:44:49,123 creating build/bdist.linux-armv7l/wheel/tests 2022-02-03T05:44:49,140 running install_egg_info 2022-02-03T05:44:49,177 running egg_info 2022-02-03T05:44:49,207 writing manifest file 'cdot.egg-info/SOURCES.txt' 2022-02-03T05:44:49,210 Copying cdot.egg-info to build/bdist.linux-armv7l/wheel/cdot-0.2.1-py3.9.egg-info 2022-02-03T05:44:49,228 running install_scripts 2022-02-03T05:44:49,632 Building wheel for cdot (pyproject.toml): finished with status 'done' 2022-02-03T05:44:49,642 Created wheel for cdot: filename=cdot-0.2.1-py3-none-any.whl size=18394 sha256=59571b8928689dc694a90ccd4d44d827dfe00eb09010328766cac3986f55b315 2022-02-03T05:44:49,643 Stored in directory: /tmp/pip-ephem-wheel-cache-d1peqrej/wheels/92/c6/b4/f9dea84d6eaaf5c233be83161c54d2f5ed29995319da8b347b 2022-02-03T05:44:49,663 Successfully built cdot 2022-02-03T05:44:49,670 Removed build tracker: '/tmp/pip-req-tracker-lvqe8zwi'