2022-02-07T15:33:03,443 Created temporary directory: /tmp/pip-ephem-wheel-cache-y06qd2lv
2022-02-07T15:33:03,449 Created temporary directory: /tmp/pip-req-tracker-xyf26fmw
2022-02-07T15:33:03,450 Initialized build tracking at /tmp/pip-req-tracker-xyf26fmw
2022-02-07T15:33:03,450 Created build tracker: /tmp/pip-req-tracker-xyf26fmw
2022-02-07T15:33:03,451 Entered build tracker: /tmp/pip-req-tracker-xyf26fmw
2022-02-07T15:33:03,452 Created temporary directory: /tmp/pip-wheel-9x8aiatu
2022-02-07T15:33:03,526 Looking in indexes: https://pypi.org/simple, https://www.piwheels.org/simple
2022-02-07T15:33:03,532 2 location(s) to search for versions of mclumix:
2022-02-07T15:33:03,532 * https://pypi.org/simple/mclumix/
2022-02-07T15:33:03,532 * https://www.piwheels.org/simple/mclumix/
2022-02-07T15:33:03,533 Fetching project page and analyzing links: https://pypi.org/simple/mclumix/
2022-02-07T15:33:03,534 Getting page https://pypi.org/simple/mclumix/
2022-02-07T15:33:03,538 Found index url https://pypi.org/simple
2022-02-07T15:33:03,747   Found link https://files.pythonhosted.org/packages/a0/ed/9f543ae58042cacdcda86ade069e9b34bddbd66614dd0e6c1af2a8aea017/mclumix-0.0.post1.tar.gz#sha256=1c35621ad405c55a6538993ca4fb8c5d10d57fd16286c01be71c4b7cd0443ce5 (from https://pypi.org/simple/mclumix/) (requires-python:>3.6), version: 0.0.post1
2022-02-07T15:33:03,748   Found link https://files.pythonhosted.org/packages/9d/3e/19d4b8e84efd9c7815631dcf977d53c4ae624e5882c6d09800a5a01fe1e0/mclumix-0.0.0.0.5.tar.gz#sha256=2b5473aaaf82ed9097ee1f59c0549848b863260edc38f5269ea2fad6d4288da5 (from https://pypi.org/simple/mclumix/) (requires-python:>3.6), version: 0.0.0.0.5
2022-02-07T15:33:03,749   Found link https://files.pythonhosted.org/packages/cf/3d/1d226c3fea26e55a7576020837cd0997ab156171601c72f7b97e2102d543/mclumix-0.0.0.1.tar.gz#sha256=520a575c8ed21f43f34f70e243e04ae9e3231ddee82e3787206376d943b054b0 (from https://pypi.org/simple/mclumix/) (requires-python:>3.6), version: 0.0.0.1
2022-02-07T15:33:03,751   Found link https://files.pythonhosted.org/packages/f0/03/b0027982c8a226e1623cdf32d06a2fc36b754af859b656c92b4672fb8651/mclumix-0.0.1.tar.gz#sha256=25cf56d8b38789b96c60c6c1daa75d9fbda2c7d2e6acac7e75e88d376e94966b (from https://pypi.org/simple/mclumix/) (requires-python:>3.6), version: 0.0.1
2022-02-07T15:33:03,752   Found link https://files.pythonhosted.org/packages/49/a6/5b1322f5a10ff634ba6ffbf0c2d0b1361d7f274b38d9d73ce022e67a565b/mclumix-0.0.2.tar.gz#sha256=9976abd631f7bf9cfd375910a377dc0f9e6a0215456d3a713207aedfe4a2518b (from https://pypi.org/simple/mclumix/) (requires-python:>3.6), version: 0.0.2
2022-02-07T15:33:03,753   Found link https://files.pythonhosted.org/packages/2e/55/46b850c79e0e5e5d084baf516f962e8a6635d4eb985e96a1084bf3c17b1e/mclumix-0.0.3.tar.gz#sha256=4e4446b67ddae69eebf797cfe847695b1099893af5fdd9c8782e8b69910b145c (from https://pypi.org/simple/mclumix/) (requires-python:>3.6), version: 0.0.3
2022-02-07T15:33:03,754   Found link https://files.pythonhosted.org/packages/d1/d9/90cc6a0ba23818baef9aa2a6d09f69fee1d947d5cc0700d86cfa81e27746/mclumix-0.0.4.tar.gz#sha256=587e91c3a7ef194f5111111c207618a8785dc63772cdb7925caae15d61923d5f (from https://pypi.org/simple/mclumix/) (requires-python:>3.6), version: 0.0.4
2022-02-07T15:33:03,756   Found link https://files.pythonhosted.org/packages/a1/e9/c872dc3e46b8b2782ae40f886160b76b22d77d60995f5f9cd614ff928cc3/mclumix-0.0.5.tar.gz#sha256=39d1907ce0a773789789ac8f33b05225daace4fc4ef7d404d2d57bf05025db56 (from https://pypi.org/simple/mclumix/) (requires-python:>3.6), version: 0.0.5
2022-02-07T15:33:03,757   Found link https://files.pythonhosted.org/packages/1d/65/a2af1a523876b836d499640fb2d3665637542aa8b03aa31bb19b24443f46/mclumix-0.0.6.tar.gz#sha256=7ea22bbdf1b7d67f409b6c3b732de21871785e7c6921acb906ce82296ba260a8 (from https://pypi.org/simple/mclumix/) (requires-python:>3.6), version: 0.0.6
2022-02-07T15:33:03,758 Fetching project page and analyzing links: https://www.piwheels.org/simple/mclumix/
2022-02-07T15:33:03,758 Getting page https://www.piwheels.org/simple/mclumix/
2022-02-07T15:33:03,760 Found index url https://www.piwheels.org/simple
2022-02-07T15:33:04,161   Skipping link: No binaries permitted for mclumix: https://www.piwheels.org/simple/mclumix/mclumix-0.0.0.0.5-py3-none-any.whl#sha256=a10c6cdbfae622a9a95a8e5cf928e121ca1316757cfbb8f685e4b7eb8aa92f95 (from https://www.piwheels.org/simple/mclumix/) (requires-python:>3.6)
2022-02-07T15:33:04,162   Skipping link: No binaries permitted for mclumix: https://www.piwheels.org/simple/mclumix/mclumix-0.0.0.1-py3-none-any.whl#sha256=e5792f85954734cfd2b346918742e004233c3f87cef4d48177b7cfe54b648cae (from https://www.piwheels.org/simple/mclumix/) (requires-python:>3.6)
2022-02-07T15:33:04,162   Skipping link: No binaries permitted for mclumix: https://www.piwheels.org/simple/mclumix/mclumix-0.0.1-py3-none-any.whl#sha256=cf1bbdf93eadb6de4777409540c0573cb73a811deef9dc035d23f4ea05980de9 (from https://www.piwheels.org/simple/mclumix/) (requires-python:>3.6)
2022-02-07T15:33:04,163   Skipping link: No binaries permitted for mclumix: https://www.piwheels.org/simple/mclumix/mclumix-0.0.2-py3-none-any.whl#sha256=476597fdf15866acc26e14142987bdfe47e7032af350bb2cd76c01ab69faa92b (from https://www.piwheels.org/simple/mclumix/) (requires-python:>3.6)
2022-02-07T15:33:04,163   Skipping link: No binaries permitted for mclumix: https://www.piwheels.org/simple/mclumix/mclumix-0.0.3-py3-none-any.whl#sha256=1594f88f6dcc449efe54942726a633b6440b1d574e0487a736c1f9235d814099 (from https://www.piwheels.org/simple/mclumix/) (requires-python:>3.6)
2022-02-07T15:33:04,164   Skipping link: No binaries permitted for mclumix: https://www.piwheels.org/simple/mclumix/mclumix-0.0.4-py3-none-any.whl#sha256=7d410c2d61af729ac0459130bafafa544843d86b3821b38481706a13594d16f9 (from https://www.piwheels.org/simple/mclumix/) (requires-python:>3.6)
2022-02-07T15:33:04,164   Skipping link: No binaries permitted for mclumix: https://www.piwheels.org/simple/mclumix/mclumix-0.0.5-py3-none-any.whl#sha256=6f6b93b454c2e7a4d2b94ccc71f56e7b8205e9b3f98b9195250a3ac565243cbf (from https://www.piwheels.org/simple/mclumix/) (requires-python:>3.6)
2022-02-07T15:33:04,165   Skipping link: No binaries permitted for mclumix: https://www.piwheels.org/simple/mclumix/mclumix-0.0.post1-py3-none-any.whl#sha256=4c8955a5d364d5bb04880c6c7987c73f1a90daaeb71ba82e6fa7c0ce4282568e (from https://www.piwheels.org/simple/mclumix/) (requires-python:>3.6)
2022-02-07T15:33:04,165 Skipping link: not a file: https://www.piwheels.org/simple/mclumix/
2022-02-07T15:33:04,166 Skipping link: not a file: https://pypi.org/simple/mclumix/
2022-02-07T15:33:04,202 Given no hashes to check 1 links for project 'mclumix': discarding no candidates
2022-02-07T15:33:04,233 Collecting mclumix==0.0.6
2022-02-07T15:33:04,237   Created temporary directory: /tmp/pip-unpack-4qsy_bmy
2022-02-07T15:33:04,513   Downloading mclumix-0.0.6.tar.gz (57 kB)
2022-02-07T15:33:04,776   Added mclumix==0.0.6 from https://files.pythonhosted.org/packages/1d/65/a2af1a523876b836d499640fb2d3665637542aa8b03aa31bb19b24443f46/mclumix-0.0.6.tar.gz#sha256=7ea22bbdf1b7d67f409b6c3b732de21871785e7c6921acb906ce82296ba260a8 to build tracker '/tmp/pip-req-tracker-xyf26fmw'
2022-02-07T15:33:04,778   Running setup.py (path:/tmp/pip-wheel-9x8aiatu/mclumix_22991c2a60d0418db0b61fbf4908c0eb/setup.py) egg_info for package mclumix
2022-02-07T15:33:04,779   Created temporary directory: /tmp/pip-pip-egg-info-96s7frxq
2022-02-07T15:33:04,780   Preparing metadata (setup.py): started
2022-02-07T15:33:04,780   Running command python setup.py egg_info
2022-02-07T15:33:06,336   Warning: 'keywords' should be a list, got type 'tuple'
2022-02-07T15:33:06,742   running egg_info
2022-02-07T15:33:06,747   creating /tmp/pip-pip-egg-info-96s7frxq/mclumix.egg-info
2022-02-07T15:33:06,763   writing manifest file '/tmp/pip-pip-egg-info-96s7frxq/mclumix.egg-info/SOURCES.txt'
2022-02-07T15:33:06,805   writing manifest file '/tmp/pip-pip-egg-info-96s7frxq/mclumix.egg-info/SOURCES.txt'
2022-02-07T15:33:06,932   Preparing metadata (setup.py): finished with status 'done'
2022-02-07T15:33:06,940   Source in /tmp/pip-wheel-9x8aiatu/mclumix_22991c2a60d0418db0b61fbf4908c0eb has version 0.0.6, which satisfies requirement mclumix==0.0.6 from https://files.pythonhosted.org/packages/1d/65/a2af1a523876b836d499640fb2d3665637542aa8b03aa31bb19b24443f46/mclumix-0.0.6.tar.gz#sha256=7ea22bbdf1b7d67f409b6c3b732de21871785e7c6921acb906ce82296ba260a8
2022-02-07T15:33:06,942   Removed mclumix==0.0.6 from https://files.pythonhosted.org/packages/1d/65/a2af1a523876b836d499640fb2d3665637542aa8b03aa31bb19b24443f46/mclumix-0.0.6.tar.gz#sha256=7ea22bbdf1b7d67f409b6c3b732de21871785e7c6921acb906ce82296ba260a8 from build tracker '/tmp/pip-req-tracker-xyf26fmw'
2022-02-07T15:33:06,954 Created temporary directory: /tmp/pip-unpack-lm08iq4k
2022-02-07T15:33:06,955 Building wheels for collected packages: mclumix
2022-02-07T15:33:06,962   Created temporary directory: /tmp/pip-wheel-dl8rg1sn
2022-02-07T15:33:06,963   Building wheel for mclumix (setup.py): started
2022-02-07T15:33:06,964   Destination directory: /tmp/pip-wheel-dl8rg1sn
2022-02-07T15:33:06,964   Running command /usr/bin/python3 -u -c 'import io, os, sys, setuptools, tokenize; sys.argv[0] = '"'"'/tmp/pip-wheel-9x8aiatu/mclumix_22991c2a60d0418db0b61fbf4908c0eb/setup.py'"'"'; __file__='"'"'/tmp/pip-wheel-9x8aiatu/mclumix_22991c2a60d0418db0b61fbf4908c0eb/setup.py'"'"';f = getattr(tokenize, '"'"'open'"'"', open)(__file__) if os.path.exists(__file__) else io.StringIO('"'"'from setuptools import setup; setup()'"'"');code = f.read().replace('"'"'\r\n'"'"', '"'"'\n'"'"');f.close();exec(compile(code, __file__, '"'"'exec'"'"'))' bdist_wheel -d /tmp/pip-wheel-dl8rg1sn
2022-02-07T15:33:08,488   Warning: 'keywords' should be a list, got type 'tuple'
2022-02-07T15:33:08,930   running bdist_wheel
2022-02-07T15:33:08,939   running build
2022-02-07T15:33:08,939   running build_py
2022-02-07T15:33:08,948   creating build
2022-02-07T15:33:08,948   creating build/lib
2022-02-07T15:33:08,949   creating build/lib/mclumi
2022-02-07T15:33:08,951   copying mclumi/Main.py -> build/lib/mclumi
2022-02-07T15:33:08,956   copying mclumi/__init__.py -> build/lib/mclumi
2022-02-07T15:33:08,959   copying mclumi/Path.py -> build/lib/mclumi
2022-02-07T15:33:08,963   creating build/lib/mclumi/align
2022-02-07T15:33:08,965   copying mclumi/align/BundlePos.py -> build/lib/mclumi/align
2022-02-07T15:33:08,968   copying mclumi/align/Write.py -> build/lib/mclumi/align
2022-02-07T15:33:08,971   copying mclumi/align/__init__.py -> build/lib/mclumi/align
2022-02-07T15:33:08,974   copying mclumi/align/Read.py -> build/lib/mclumi/align
2022-02-07T15:33:08,980   creating build/lib/mclumi/external
2022-02-07T15:33:08,981   copying mclumi/external/__init__.py -> build/lib/mclumi/external
2022-02-07T15:33:08,984   copying mclumi/external/UMItoolsSamMethods.py -> build/lib/mclumi/external
2022-02-07T15:33:08,990   creating build/lib/mclumi/deduplicate
2022-02-07T15:33:08,992   copying mclumi/deduplicate/__init__.py -> build/lib/mclumi/deduplicate
2022-02-07T15:33:08,996   creating build/lib/mclumi/plot
2022-02-07T15:33:08,998   copying mclumi/plot/Graph.py -> build/lib/mclumi/plot
2022-02-07T15:33:09,001   copying mclumi/plot/__init__.py -> build/lib/mclumi/plot
2022-02-07T15:33:09,005   creating build/lib/mclumi/network
2022-02-07T15:33:09,007   copying mclumi/network/Edge.py -> build/lib/mclumi/network
2022-02-07T15:33:09,010   copying mclumi/network/__init__.py -> build/lib/mclumi/network
2022-02-07T15:33:09,013   copying mclumi/network/Adjacency.py -> build/lib/mclumi/network
2022-02-07T15:33:09,017   copying mclumi/network/CC.py -> build/lib/mclumi/network
2022-02-07T15:33:09,022   creating build/lib/mclumi/fastq
2022-02-07T15:33:09,023   copying mclumi/fastq/Write.py -> build/lib/mclumi/fastq
2022-02-07T15:33:09,026   copying mclumi/fastq/__init__.py -> build/lib/mclumi/fastq
2022-02-07T15:33:09,029   copying mclumi/fastq/Read.py -> build/lib/mclumi/fastq
2022-02-07T15:33:09,034   creating build/lib/mclumi/util
2022-02-07T15:33:09,036   copying mclumi/util/Folder.py -> build/lib/mclumi/util
2022-02-07T15:33:09,039   copying mclumi/util/Single.py -> build/lib/mclumi/util
2022-02-07T15:33:09,042   copying mclumi/util/__init__.py -> build/lib/mclumi/util
2022-02-07T15:33:09,045   copying mclumi/util/Writer.py -> build/lib/mclumi/util
2022-02-07T15:33:09,048   copying mclumi/util/Reader.py -> build/lib/mclumi/util
2022-02-07T15:33:09,052   copying mclumi/util/Console.py -> build/lib/mclumi/util
2022-02-07T15:33:09,055   copying mclumi/util/Hamming.py -> build/lib/mclumi/util
2022-02-07T15:33:09,058   copying mclumi/util/Number.py -> build/lib/mclumi/util
2022-02-07T15:33:09,062   creating build/lib/mclumi/trim
2022-02-07T15:33:09,064   copying mclumi/trim/SeqRuleOut.py -> build/lib/mclumi/trim
2022-02-07T15:33:09,067   copying mclumi/trim/Fixed.py -> build/lib/mclumi/trim
2022-02-07T15:33:09,071   copying mclumi/trim/Template.py -> build/lib/mclumi/trim
2022-02-07T15:33:09,075   copying mclumi/trim/__init__.py -> build/lib/mclumi/trim
2022-02-07T15:33:09,079   copying mclumi/trim/BCRuleOut.py -> build/lib/mclumi/trim
2022-02-07T15:33:09,082   copying mclumi/trim/Filter.py -> build/lib/mclumi/trim
2022-02-07T15:33:09,085   copying mclumi/trim/Reader.py -> build/lib/mclumi/trim
2022-02-07T15:33:09,088   copying mclumi/trim/UMIRuleOut.py -> build/lib/mclumi/trim
2022-02-07T15:33:09,093   creating build/lib/mclumi/deduplicate/monomer
2022-02-07T15:33:09,095   copying mclumi/deduplicate/monomer/Cluster.py -> build/lib/mclumi/deduplicate/monomer
2022-02-07T15:33:09,100   copying mclumi/deduplicate/monomer/DedupBasic.py -> build/lib/mclumi/deduplicate/monomer
2022-02-07T15:33:09,106   copying mclumi/deduplicate/monomer/DedupPos_test.py -> build/lib/mclumi/deduplicate/monomer
2022-02-07T15:33:09,112   copying mclumi/deduplicate/monomer/Build.py -> build/lib/mclumi/deduplicate/monomer
2022-02-07T15:33:09,116   copying mclumi/deduplicate/monomer/DedupSC.py -> build/lib/mclumi/deduplicate/monomer
2022-02-07T15:33:09,122   copying mclumi/deduplicate/monomer/DedupGene.py -> build/lib/mclumi/deduplicate/monomer
2022-02-07T15:33:09,127   copying mclumi/deduplicate/monomer/__init__.py -> build/lib/mclumi/deduplicate/monomer
2022-02-07T15:33:09,131   copying mclumi/deduplicate/monomer/Build_test.py -> build/lib/mclumi/deduplicate/monomer
2022-02-07T15:33:09,134   copying mclumi/deduplicate/monomer/Adjacency.py -> build/lib/mclumi/deduplicate/monomer
2022-02-07T15:33:09,138   copying mclumi/deduplicate/monomer/MarkovClustering.py -> build/lib/mclumi/deduplicate/monomer
2022-02-07T15:33:09,142   copying mclumi/deduplicate/monomer/Directional.py -> build/lib/mclumi/deduplicate/monomer
2022-02-07T15:33:09,146   copying mclumi/deduplicate/monomer/DedupPos.py -> build/lib/mclumi/deduplicate/monomer
2022-02-07T15:33:09,151   running egg_info
2022-02-07T15:33:09,225   writing manifest file 'mclumix.egg-info/SOURCES.txt'
2022-02-07T15:33:09,251   /usr/local/lib/python3.7/dist-packages/setuptools/command/install.py:37: SetuptoolsDeprecationWarning: setup.py install is deprecated. Use build and pip and other standards-based tools.
2022-02-07T15:33:09,251     setuptools.SetuptoolsDeprecationWarning,
2022-02-07T15:33:09,255   running install
2022-02-07T15:33:09,318   running install_lib
2022-02-07T15:33:09,325   creating build/bdist.linux-armv7l
2022-02-07T15:33:09,325   creating build/bdist.linux-armv7l/wheel
2022-02-07T15:33:09,329   creating build/bdist.linux-armv7l/wheel/mclumi
2022-02-07T15:33:09,331   creating build/bdist.linux-armv7l/wheel/mclumi/align
2022-02-07T15:33:09,354   creating build/bdist.linux-armv7l/wheel/mclumi/external
2022-02-07T15:33:09,365   creating build/bdist.linux-armv7l/wheel/mclumi/deduplicate
2022-02-07T15:33:09,371   creating build/bdist.linux-armv7l/wheel/mclumi/deduplicate/monomer
2022-02-07T15:33:09,429   creating build/bdist.linux-armv7l/wheel/mclumi/plot
2022-02-07T15:33:09,438   creating build/bdist.linux-armv7l/wheel/mclumi/network
2022-02-07T15:33:09,454   creating build/bdist.linux-armv7l/wheel/mclumi/fastq
2022-02-07T15:33:09,465   creating build/bdist.linux-armv7l/wheel/mclumi/util
2022-02-07T15:33:09,494   creating build/bdist.linux-armv7l/wheel/mclumi/trim
2022-02-07T15:33:09,521   running install_egg_info
2022-02-07T15:33:09,536   Copying mclumix.egg-info to build/bdist.linux-armv7l/wheel/mclumix-0.0.6-py3.7.egg-info
2022-02-07T15:33:09,558   running install_scripts
2022-02-07T15:33:10,099   Building wheel for mclumix (setup.py): finished with status 'done'
2022-02-07T15:33:10,106   Created wheel for mclumix: filename=mclumix-0.0.6-py3-none-any.whl size=75079 sha256=55cb4106bb858e8e1cb00feddca54f9cd531424cd5d675d3b5167302067ad38a
2022-02-07T15:33:10,106   Stored in directory: /tmp/pip-ephem-wheel-cache-y06qd2lv/wheels/97/60/88/a1902c82a8fb3b8a6f78a1b64d281c7907a8673840a438229b
2022-02-07T15:33:10,131 Successfully built mclumix
2022-02-07T15:33:10,141 Removed build tracker: '/tmp/pip-req-tracker-xyf26fmw'